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Conserved domains on  [gi|166706911|ref|NP_006408|]
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interferon-induced protein 44 [Homo sapiens]

Protein Classification

TLD domain-containing protein( domain architecture ID 4815)

TLD domain-containing protein similar to Candida albicans oxidation resistance protein 1 (OXR1) and Pan troglodytes interferon-induced protein 44 (IFI44)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TLD super family cl02144
TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It ...
 26-70 5.24e-03

TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It's structure consists of a beta-sandwich surrounded by two helices and two one-turn helices.


The actual alignment was detected with superfamily member pfam07534:

Pssm-ID: 445683  Cd Length: 139  Bit Score: 37.20  E-value: 5.24e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 166706911   26 LLYKGSVHGFRNGVLLDRCCNQGPTLTVIYSED-HIIGAYAEESYQ 70
Cdd:pfam07534   1 LLYSTSRDGSSYQTFLEKIDNKGPTLLIIKDNDgYIFGAFASQPWK 46
 
Name Accession Description Interval E-value
TLD pfam07534
TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It ...
 26-70 5.24e-03

TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It's structure consists of a beta-sandwich surrounded by two helices and two one-turn helices.


Pssm-ID: 429519  Cd Length: 139  Bit Score: 37.20  E-value: 5.24e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 166706911   26 LLYKGSVHGFRNGVLLDRCCNQGPTLTVIYSED-HIIGAYAEESYQ 70
Cdd:pfam07534   1 LLYSTSRDGSSYQTFLEKIDNKGPTLLIIKDNDgYIFGAFASQPWK 46
 
Name Accession Description Interval E-value
TLD pfam07534
TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It ...
 26-70 5.24e-03

TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It's structure consists of a beta-sandwich surrounded by two helices and two one-turn helices.


Pssm-ID: 429519  Cd Length: 139  Bit Score: 37.20  E-value: 5.24e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 166706911   26 LLYKGSVHGFRNGVLLDRCCNQGPTLTVIYSED-HIIGAYAEESYQ 70
Cdd:pfam07534   1 LLYSTSRDGSSYQTFLEKIDNKGPTLLIIKDNDgYIFGAFASQPWK 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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