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Conserved domains on  [gi|1489865991|ref|NP_006484|]
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bis(monoacylglycero)phosphate synthase CLN5 isoform 1 [Homo sapiens]

Protein Classification

CLN5 domain-containing protein( domain architecture ID 10633231)

CLN5 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CLN5 pfam15014
Ceroid-lipofuscinosis neuronal protein 5;
58-349 0e+00

Ceroid-lipofuscinosis neuronal protein 5;


:

Pssm-ID: 464446  Cd Length: 296  Bit Score: 602.11  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1489865991  58 KRFDFRPKPDPYCQAKYTFCPTGSP---IPVMEGDDDIEVFRLQAPVWEFKYGDLLGHLKIMHDAIGFRSTLTGKNYTME 134
Cdd:pfam15014   1 RRFDSRPKTDPYCQALYTFCPTGSPdgsIPKMKDDDVIEVYRLQAPVWEFKYGDLLGHFKIMHDAIGFRSSLTGKNYTME 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1489865991 135 WYELFQLGNCTFPHLRPEMDAPFWCNQGAACFFEGIDDVHWKENGTLVQVATISGNMFNQMAKWVKQDNETGIYYETWNV 214
Cdd:pfam15014  81 WYELFQLGNCTFPHLRPEMDAPFWCNQGAACFYEGIDDLHWKENGTLVKVAEISGNVFNEMAKWVKQDNETGIYYETWTV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1489865991 215 KASPEKGAETWFDSYDCSKFVLRTFNKLAEFGAEFKN-IETNYTRIFLYSGEPTYLGNETSVFGPTGNKTLGLAIKRFYY 293
Cdd:pfam15014 161 RASPEPNSTVWFESYDCSKFVLRTYQKLAELGAKFKStVQTNYTRIFLYSGEPTYLGNDTSIFGPTGNKTLAADIRKFYY 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1489865991 294 PFKPHLPTKEFLLSLLQIFDAVIVHKQFYLFYNFEYWFLPMKFPFIKITYEEIPLP 349
Cdd:pfam15014 241 PFQPHQSFKEFLLSLLEAYDEVVLEKQFYLFYNFEYWFLPMKFPYIKITYEEIPLP 296
 
Name Accession Description Interval E-value
CLN5 pfam15014
Ceroid-lipofuscinosis neuronal protein 5;
58-349 0e+00

Ceroid-lipofuscinosis neuronal protein 5;


Pssm-ID: 464446  Cd Length: 296  Bit Score: 602.11  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1489865991  58 KRFDFRPKPDPYCQAKYTFCPTGSP---IPVMEGDDDIEVFRLQAPVWEFKYGDLLGHLKIMHDAIGFRSTLTGKNYTME 134
Cdd:pfam15014   1 RRFDSRPKTDPYCQALYTFCPTGSPdgsIPKMKDDDVIEVYRLQAPVWEFKYGDLLGHFKIMHDAIGFRSSLTGKNYTME 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1489865991 135 WYELFQLGNCTFPHLRPEMDAPFWCNQGAACFFEGIDDVHWKENGTLVQVATISGNMFNQMAKWVKQDNETGIYYETWNV 214
Cdd:pfam15014  81 WYELFQLGNCTFPHLRPEMDAPFWCNQGAACFYEGIDDLHWKENGTLVKVAEISGNVFNEMAKWVKQDNETGIYYETWTV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1489865991 215 KASPEKGAETWFDSYDCSKFVLRTFNKLAEFGAEFKN-IETNYTRIFLYSGEPTYLGNETSVFGPTGNKTLGLAIKRFYY 293
Cdd:pfam15014 161 RASPEPNSTVWFESYDCSKFVLRTYQKLAELGAKFKStVQTNYTRIFLYSGEPTYLGNDTSIFGPTGNKTLAADIRKFYY 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1489865991 294 PFKPHLPTKEFLLSLLQIFDAVIVHKQFYLFYNFEYWFLPMKFPFIKITYEEIPLP 349
Cdd:pfam15014 241 PFQPHQSFKEFLLSLLEAYDEVVLEKQFYLFYNFEYWFLPMKFPYIKITYEEIPLP 296
 
Name Accession Description Interval E-value
CLN5 pfam15014
Ceroid-lipofuscinosis neuronal protein 5;
58-349 0e+00

Ceroid-lipofuscinosis neuronal protein 5;


Pssm-ID: 464446  Cd Length: 296  Bit Score: 602.11  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1489865991  58 KRFDFRPKPDPYCQAKYTFCPTGSP---IPVMEGDDDIEVFRLQAPVWEFKYGDLLGHLKIMHDAIGFRSTLTGKNYTME 134
Cdd:pfam15014   1 RRFDSRPKTDPYCQALYTFCPTGSPdgsIPKMKDDDVIEVYRLQAPVWEFKYGDLLGHFKIMHDAIGFRSSLTGKNYTME 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1489865991 135 WYELFQLGNCTFPHLRPEMDAPFWCNQGAACFFEGIDDVHWKENGTLVQVATISGNMFNQMAKWVKQDNETGIYYETWNV 214
Cdd:pfam15014  81 WYELFQLGNCTFPHLRPEMDAPFWCNQGAACFYEGIDDLHWKENGTLVKVAEISGNVFNEMAKWVKQDNETGIYYETWTV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1489865991 215 KASPEKGAETWFDSYDCSKFVLRTFNKLAEFGAEFKN-IETNYTRIFLYSGEPTYLGNETSVFGPTGNKTLGLAIKRFYY 293
Cdd:pfam15014 161 RASPEPNSTVWFESYDCSKFVLRTYQKLAELGAKFKStVQTNYTRIFLYSGEPTYLGNDTSIFGPTGNKTLAADIRKFYY 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1489865991 294 PFKPHLPTKEFLLSLLQIFDAVIVHKQFYLFYNFEYWFLPMKFPFIKITYEEIPLP 349
Cdd:pfam15014 241 PFQPHQSFKEFLLSLLEAYDEVVLEKQFYLFYNFEYWFLPMKFPYIKITYEEIPLP 296
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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