|
Name |
Accession |
Description |
Interval |
E-value |
| Filament |
pfam00038 |
Intermediate filament protein; |
7-312 |
7.07e-24 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 104.23 E-value: 7.07e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 7 EESFQMWELNRRLEAYLARVKALEEQNELLSAELGGLRAQSADTSWR--AHADDELAALRALVDQRWREKHAAEVARDNL 84
Cdd:pfam00038 1 NEKEQLQELNDRLASYIDKVRFLEQQNKLLETKISELRQKKGAEPSRlySLYEKEIEDLRRQLDTLTVERARLQLELDNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 85 AEELEGVAGRCQQLRLARERTTEEVARNRRAVEAEKCARAWLSSQVAELERELEALRVAHEEERVGLNAQAACAPRCPAP 164
Cdd:pfam00038 81 RLAAEDFRQKYEDELNLRTSAENDLVGLRKDLDEATLARVDLEAKIESLKEELAFLKKNHEEEVRELQAQVSDTQVNVEM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 165 PRGPPAPAPEV--------EELA---RRLGEAWrgavrgYQERVAHMETSLGQARERLGRAVQGAREGRLELQQLQAERG 233
Cdd:pfam00038 161 DAARKLDLTSAlaeiraqyEEIAaknREEAEEW------YQSKLEELQQAAARNGDALRSAKEEITELRRTIQSLEIELQ 234
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 38176300 234 GLLERRAALEQRLEGRWQERLRATEKFQLAVEALEQEKQGLQSQIAQVLEGRQQLAHLKMSLSLEVATYRTLLEAENSR 312
Cdd:pfam00038 235 SLKKQKASLERQLAETEERYELQLADYQELISELEAELQETRQEMARQLREYQELLNVKLALDIEIATYRKLLEGEECR 313
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
14-827 |
3.98e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 74.71 E-value: 3.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 14 ELNRRLEAYLARVKALEEQNELLSAELGGLRAQSADtswrahADDELAALRALVDQRWREKHAAEVARDNLAEELEGVAG 93
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELEEEIEE------LQKELYALANEISRLEQQKQILRERLANLERQLEELEA 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 94 RCQQLRLARERTTEEVARNRRAVEAEKCARAWLSSQVAELERELEALRVAHEEERVGLNAQAAcapRCPAPPRGPPAPAP 173
Cdd:TIGR02168 324 QLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRS---KVAQLELQIASLNN 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 174 EVEELARRLgeawrgavrgyqERVAHMETSLGQARERLGRAVQGAR--EGRLELQQLQAERGGLLERRAALEQRLEGRWQ 251
Cdd:TIGR02168 401 EIERLEARL------------ERLEDRRERLQQEIEELLKKLEEAElkELQAELEELEEELEELQEELERLEEALEELRE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 252 ERLRATEKFQLA-------------VEALEQEKQGLQSQIAQVLEGRQQLAHLKMSLS--LEV-ATYRTLLEAE-NSRLQ 314
Cdd:TIGR02168 469 ELEEAEQALDAAerelaqlqarldsLERLQENLEGFSEGVKALLKNQSGLSGILGVLSelISVdEGYEAAIEAAlGGRLQ 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 315 TPgggskTSLSFQDPKLELQFPRTPE-GRRLGSLLPVLSPTSLPSPLPATLETpvpaflknqeflqartptlastpIPPT 393
Cdd:TIGR02168 549 AV-----VVENLNAAKKAIAFLKQNElGRVTFLPLDSIKGTEIQGNDREILKN-----------------------IEGF 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 394 PQAPSPAVDAEIRAQDAPLSLLQT-------QGGRKQAPEpLRAEARVAIPASVLPGPeepGGqrqeASTGQSPEDHASL 466
Cdd:TIGR02168 601 LGVAKDLVKFDPKLRKALSYLLGGvlvvddlDNALELAKK-LRPGYRIVTLDGDLVRP---GG----VITGGSAKTNSSI 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 467 appLSPDHSSLEAkdgesggsrvfsicrgegEGQIWGLVEKETAIEGKV--VSSLQQEIWEEEDLNRKEIQDS--QVPLE 542
Cdd:TIGR02168 673 ---LERRREIEEL------------------EEKIEELEEKIAELEKALaeLRKELEELEEELEQLRKELEELsrQISAL 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 543 KETLKSLGEEIQESLKTLENQSHETLERENQEcpRSLEEDLETLKSLEKENKELLKDVEVVRPLEKEAVGQLKPTGKEDT 622
Cdd:TIGR02168 732 RKDLARLEAEVEQLEERIAQLSKELTELEAEI--EELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELR 809
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 623 QTLQSLQKENQELMKSLEGNLETFLFPGTENQELVSSLQENLESLTALEKEnQEPLRSPEVGDEEALRPLTKEnqeplRS 702
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAE-IEELEELIEELESELEALLNE-----RA 883
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 703 LEDENKEAFRSLEKENQEPLKTLEEEdqsiVRPLETEnHKSLRSLEEQDQETLRTLEKETQQRRRSLGEQDQMTLRP--- 779
Cdd:TIGR02168 884 SLEEALALLRSELEELSEELRELESK----RSELRRE-LEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEaea 958
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 38176300 780 -PEKVDLEP------LKSLDQEIAR--PL----------ENENQEFLKSLKEESVEAVKSLETEILE 827
Cdd:TIGR02168 959 lENKIEDDEeearrrLKRLENKIKElgPVnlaaieeyeeLKERYDFLTAQKEDLTEAKETLEEAIEE 1025
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
14-607 |
3.63e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.51 E-value: 3.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 14 ELNRRLEAyLA-------RVKALEEQNELLSAELGGLRAQSADTSWRAhADDELAALRALVDQRWREKHAAEVARDNLAE 86
Cdd:COG1196 197 ELERQLEP-LErqaekaeRYRELKEELKELEAELLLLKLRELEAELEE-LEAELEELEAELEELEAELAELEAELEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 87 ELEGVAGRCQQLRLARERTTEEVARNRRAVEAEKCARAWLSSQVAELERELEALRVAHEEERvglNAQAACAPRCPAPPR 166
Cdd:COG1196 275 ELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELE---EELEELEEELEEAEE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 167 GPPAPAPEVEELARRLGEAwrgavrgyQERVAHMETSLGQARERLGRAVQGAREGRLELQQLQAERGGLLERRAALEQRL 246
Cdd:COG1196 352 ELEEAEAELAEAEEALLEA--------EAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEEL 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 247 EGRWQERLRATEKFQLAVEALEQEKQGLQSQIAQVLEGRQQLAHLKMSLSLEVATYRTLLEAENSRLQtpgggSKTSLSF 326
Cdd:COG1196 424 EELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAA-----RLLLLLE 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 327 QDPKLELQFPRTPEGRRLGSLLPVLSPTSLPSPLPATLETPVPAFLknQEFLQARtptlastpipptpqapspAVDAEIR 406
Cdd:COG1196 499 AEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAAL--AAALQNI------------------VVEDDEV 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 407 AQDAPLSLLQTQGGRKQAPEPLRAEARVAIPASVLPGPEEPGGQRQEASTGQSPEDHASLAPPLSPDHSSLEAKDGESGG 486
Cdd:COG1196 559 AAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRR 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 487 SRVFSICRGEGEGQIWGLVEKETAIEGKVVSSLQQEIWEEEDLNRKEIQDSQVPLEKETLKSLGEEIQESLKTLENQSHE 566
Cdd:COG1196 639 AVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLE 718
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 38176300 567 TLERENQECPRSLEEDLETLKSLEKENKELLKDVEVVRPLE 607
Cdd:COG1196 719 EELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEP 759
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
11-295 |
1.58e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 66.23 E-value: 1.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 11 QMWELNRRLEAYLARVKALEEQNELLSAELGGLRAQSADTSWRAHA-DDELAALRALVDQRWREKHAAEVARDNLAEELE 89
Cdd:TIGR02168 685 KIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISAlRKDLARLEAEVEQLEERIAQLSKELTELEAEIE 764
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 90 GVAGRCQQLRLARERTTEEVARNRRAVEAEKCARAWLSSQVAELERELEALRVAHEEERVGL----NAQAACAPRCPAPP 165
Cdd:TIGR02168 765 ELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLesleRRIAATERRLEDLE 844
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 166 RGPPAPAPEVEELARRLGEAWRG------AVRGYQERVAHMETSLGQARERLGRAVQGAREGRLELQQLQAERGGLLERR 239
Cdd:TIGR02168 845 EQIEELSEDIESLAAEIEELEELieelesELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKL 924
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 240 AALEQRLEGRWQERL----RATEKFQLAVEALEQEKQGLQSQIAQVlegRQQLAHLKMSL 295
Cdd:TIGR02168 925 AQLELRLEGLEVRIDnlqeRLSEEYSLTLEEAEALENKIEDDEEEA---RRRLKRLENKI 981
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
17-296 |
8.01e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.78 E-value: 8.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 17 RRLEAYLARVKALEEQNELLSAELGGLRAqsadtsWRAHADDELAALRALVDQRWREKHAAEVAR--DNLAEELEGV--- 91
Cdd:COG4913 610 AKLAALEAELAELEEELAEAEERLEALEA------ELDALQERREALQRLAEYSWDEIDVASAEReiAELEAELERLdas 683
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 92 AGRCQQLRLARERTTEEVARNRRAVEAekcarawLSSQVAELERELEALRVAHEEERVGLNAQAACAPRCPAPPRGPPAP 171
Cdd:COG4913 684 SDDLAALEEQLEELEAELEELEEELDE-------LKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFA 756
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 172 APEVEELARRLGEAWRGAVRGYQERVAHMETSLGQARER-----------LGRAVQGAREGRLELQQLQAErgGLLERRA 240
Cdd:COG4913 757 AALGDAVERELRENLEERIDALRARLNRAEEELERAMRAfnrewpaetadLDADLESLPEYLALLDRLEED--GLPEYEE 834
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 38176300 241 aleqrlegRWQERLRATEkfqlavealEQEKQGLQSQIAQ-VLEGRQQLAHLKMSLS 296
Cdd:COG4913 835 --------RFKELLNENS---------IEFVADLLSKLRRaIREIKERIDPLNDSLK 874
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
530-842 |
9.88e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 60.03 E-value: 9.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 530 NRKEIQDSQVPLEKETLKSLGEEIQESLKTLENqshetLERENQECPRSLEEDLETLKSLEKENKELLKDVEvvrpleke 609
Cdd:TIGR04523 321 KKLEEIQNQISQNNKIISQLNEQISQLKKELTN-----SESENSEKQRELEEKQNEIEKLKKENQSYKQEIK-------- 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 610 avgQLKPTGKEDTQTLQSLQKENQElmksLEGNLETFlfpgTENQELVSSLQENLESLTALEKENQEPLRSPEVGDE--- 686
Cdd:TIGR04523 388 ---NLESQINDLESKIQNQEKLNQQ----KDEQIKKL----QQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKElii 456
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 687 EALRPLTKENQEPLRSLEDENKEAFRSLEKENQE------PLKTLEEEDQSIVRPLETENHKSLRSLEEQDQETLRTLEK 760
Cdd:TIGR04523 457 KNLDNTRESLETQLKVLSRSINKIKQNLEQKQKElkskekELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEK 536
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 761 ETQ--QRRRSLGEQDQ-MTLRPPEKVDLEplksLDQEIARpLENENQEFLKSlKEESVEAVKSLETEILESLKsaGQENL 837
Cdd:TIGR04523 537 ESKisDLEDELNKDDFeLKKENLEKEIDE----KNKEIEE-LKQTQKSLKKK-QEEKQELIDQKEKEKKDLIK--EIEEK 608
|
....*
gi 38176300 838 ETLKS 842
Cdd:TIGR04523 609 EKKIS 613
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
616-944 |
5.01e-08 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 58.00 E-value: 5.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 616 PTGKEDTQTLQSLQKenqelMKSLEgnletflfpgTENQELVSSLQENLESLTALEKENQeplrspevgDEEALRPL--- 692
Cdd:PRK11281 36 PTEADVQAQLDALNK-----QKLLE----------AEDKLVQQDLEQTLALLDKIDRQKE---------ETEQLKQQlaq 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 693 ----TKENQEPLRSLEDEN----KEAFRSLE-KENQEPLKTLEEEDQSIVRPLETENHK--SLRSLEEQDQETLRTLEKE 761
Cdd:PRK11281 92 apakLRQAQAELEALKDDNdeetRETLSTLSlRQLESRLAQTLDQLQNAQNDLAEYNSQlvSLQTQPERAQAALYANSQR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 762 TQQRRRSL--GEQDQMTLRPPEKVDLE-PLKSLDQEIA---RPLENEN--QEFLKSLKEESVEAVKSLETEIlESLKSA- 832
Cdd:PRK11281 172 LQQIRNLLkgGKVGGKALRPSQRVLLQaEQALLNAQNDlqrKSLEGNTqlQDLLQKQRDYLTARIQRLEHQL-QLLQEAi 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 833 GQENLEtlKSPETQAPLWTPEEINQGAMNPLekeIQEPLesvEVNQE-TFRLLEEenQESLRSLgawNLENLRSPEEVDK 911
Cdd:PRK11281 251 NSKRLT--LSEKTVQEAQSQDEAARIQANPL---VAQEL---EINLQlSQRLLKA--TEKLNTL---TQQNLRVKNWLDR 317
|
330 340 350
....*....|....*....|....*....|....*...
gi 38176300 912 --ESQRNLEEEENLGKGeyqeSL---RSLEEEGQELPQ 944
Cdd:PRK11281 318 ltQSERNIKEQISVLKG----SLllsRILYQQQQALPS 351
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
14-291 |
5.76e-08 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 57.72 E-value: 5.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 14 ELNRRLEAYLARVKALEeqnELLSAELGGLRAQSADTSWRAHADDELAALRALVDQRWREKHAAEVARDNLAEELEGVAG 93
Cdd:COG3903 563 EGRRWLERALAAAGEAA---AALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLLAALAAAAAAAAAA 639
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 94 RCQQLRLARERTTEEVARNRRAVEAEKCARAWLSSQVAELERELEALRVAHEEERVGLNAQAACAPRCPAPPRGPPAPAP 173
Cdd:COG3903 640 AAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAAAAAALAAAAAAAA 719
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 174 EVEELARRLGEAWRGAVRGYQERVAHMETSLGQARERLGRAVQGAREGRLELQQLQAERGGLLERRAALEQRLEGRWQER 253
Cdd:COG3903 720 AAAAAAALLAAAAAAALAAAAAAAALALAAAAAAAAAAAAAAALAAAAAAAALAALLLALAAAAAALAAAAAAAAAAAAA 799
|
250 260 270
....*....|....*....|....*....|....*...
gi 38176300 254 LRATEKFQLAVEALEQEKQGLQSQIAQVLEGRQQLAHL 291
Cdd:COG3903 800 AAAAAAAAAAAAAAAALAAAAAAAAAAAAALAAALAAA 837
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
14-146 |
1.25e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.85 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 14 ELNRRLEAYLARVKALEEQNELLSAELGGLRAQsadtsWRAHADDELAALRalvdqrwREKHAAEVARDNLAEELEGVAG 93
Cdd:COG4913 299 ELRAELARLEAELERLEARLDALREELDELEAQ-----IRGNGGDRLEQLE-------REIERLERELEERERRRARLEA 366
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 38176300 94 RCQQLRLARERTTEEVARNRRAV----EAEKCARAWLSSQVAELERELEALRVAHEE 146
Cdd:COG4913 367 LLAALGLPLPASAEEFAALRAEAaallEALEEELEALEEALAEAEAALRDLRRELRE 423
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
78-314 |
1.29e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.87 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 78 EVARDNLA------EELEgvagrcQQL-RLARERtteEVARNRRAVEAEK---------CARAWLSSQVAELERELEALR 141
Cdd:COG1196 182 EATEENLErledilGELE------RQLePLERQA---EKAERYRELKEELkeleaelllLKLRELEAELEELEAELEELE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 142 VAHEEERVGLNAQAAcaprcpapprGPPAPAPEVEELARRLGEAwRGAVRGYQERVAHMETSLGQARERLGRAVQGAREG 221
Cdd:COG1196 253 AELEELEAELAELEA----------ELEELRLELEELELELEEA-QAEEYELLAELARLEQDIARLEERRRELEERLEEL 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 222 RLELQQLQAERGGLLERRAALEQRLEGRWQERLRATEKFQLAVEALEQEKQGLQSQIAQVLEGRQQLAHLKMSLSLEVAT 301
Cdd:COG1196 322 EEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ 401
|
250
....*....|...
gi 38176300 302 YRTLLEAENSRLQ 314
Cdd:COG1196 402 LEELEEAEEALLE 414
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
532-999 |
2.30e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 55.88 E-value: 2.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 532 KEIQDSQVPLEKEtLKSLGEEIQESLKTLENQSH--ETLERENQECPRSLEEDLEtlkslekENKELLKDVEVVRPLeke 609
Cdd:pfam05483 88 EKIKKWKVSIEAE-LKQKENKLQENRKIIEAQRKaiQELQFENEKVSLKLEEEIQ-------ENKDLIKENNATRHL--- 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 610 aVGQLKPT---GKEDTQTLQSLQKENQELMKSLEGNLETFLFPGTENQ--------ELVSSLQENLESLTALEKENQEPL 678
Cdd:pfam05483 157 -CNLLKETcarSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRvqaenarlEMHFKLKEDHEKIQHLEEEYKKEI 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 679 RSPEVGDEEALRPLT-KENQ-EPLRSLEDENKEAFRSLEKENQ---EPLKTLEEEDQSIVRPLE------TENHKSLRSL 747
Cdd:pfam05483 236 NDKEKQVSLLLIQITeKENKmKDLTFLLEESRDKANQLEEKTKlqdENLKELIEKKDHLTKELEdikmslQRSMSTQKAL 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 748 EEQDQETLRTL-----EKETQQRRRSLGEQDQMTLRPPEKVDLEPLKSLDQEIARPLENeNQEFLKSLKEESVEavKSLE 822
Cdd:pfam05483 316 EEDLQIATKTIcqlteEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEK-NEDQLKIITMELQK--KSSE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 823 TEILESLKSAGQENLETLKS--PETQAPLWTPEEINQGAmNPLEKEIQEPLESVEVNQETFRLLEEENQESLRSLGAWNL 900
Cdd:pfam05483 393 LEEMTKFKNNKEVELEELKKilAEDEKLLDEKKQFEKIA-EELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLK 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 901 ENLRSPEEVDKESQRNLEEEENLGKgeyqeslrsLEEEGQELPQSADVQRWEdtVEKDQE----LAQESPPGMAGVENED 976
Cdd:pfam05483 472 EVEDLKTELEKEKLKNIELTAHCDK---------LLLENKELTQEASDMTLE--LKKHQEdiinCKKQEERMLKQIENLE 540
|
490 500
....*....|....*....|...
gi 38176300 977 EAELNLREQDGFTgKEEVVEQGE 999
Cdd:pfam05483 541 EKEMNLRDELESV-REEFIQKGD 562
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
542-897 |
2.62e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 55.75 E-value: 2.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 542 EKETLKSLgEEIQESLKTLENqshETLERENQECPRSLEEDLETLKSLEKENKELLKDVEVVRPLEKEAVGQLKPTGKED 621
Cdd:pfam02463 171 KKEALKKL-IEETENLAELII---DLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 622 TQTLQSLQKENQELMKSLEgNLETFLFPGTENQELVSSLQENLESLTALEKENQEPLRSPEVGDEEALRPLTKENQEPLR 701
Cdd:pfam02463 247 RDEQEEIESSKQEIEKEEE-KLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKK 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 702 SLEDENKEAFRSLEKENQEplktLEEEDQSIVRPLETENHKSLRSLEEQDQETLRTLEKETQQRRRSLGEQDQMTLRPPE 781
Cdd:pfam02463 326 AEKELKKEKEEIEELEKEL----KELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKS 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 782 KVDLEplKSLDQEIARPLENENQEFLKSLKEESVEAVKSLETEILESLKSAGQENLETLKSPETQAPLwTPEEINQGAMN 861
Cdd:pfam02463 402 EEEKE--AQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELEL-KKSEDLLKETQ 478
|
330 340 350
....*....|....*....|....*....|....*.
gi 38176300 862 PLEKEIQEPLESVEVNQETFRLLEEENQESLRSLGA 897
Cdd:pfam02463 479 LVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLA 514
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
517-827 |
3.37e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 51.94 E-value: 3.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 517 SSLQQEIWEEEDLNR-KEIQDSQVPLEKET-------LKSLGEEIQESLKTLENQSHEtLERENQECPRSLEEDLETLKS 588
Cdd:TIGR04523 394 NDLESKIQNQEKLNQqKDEQIKKLQQEKELlekeierLKETIIKNNSEIKDLTNQDSV-KELIIKNLDNTRESLETQLKV 472
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 589 LEKENKELLKDVEvvrplekeavgQLKPTGKEDTQTLQSLQKENQElmksLEGNLETFlfpgTENQELVSSLQENLESlT 668
Cdd:TIGR04523 473 LSRSINKIKQNLE-----------QKQKELKSKEKELKKLNEEKKE----LEEKVKDL----TKKISSLKEKIEKLES-E 532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 669 ALEKENQeplrspevgdeealrplTKENQEPLRSLEDENKeaFRSLEKENQEPLKTLEEEDQsivrpleteNHKSLRSLE 748
Cdd:TIGR04523 533 KKEKESK-----------------ISDLEDELNKDDFELK--KENLEKEIDEKNKEIEELKQ---------TQKSLKKKQ 584
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 749 EQDQETLRTLEKETQQRRRSLGEQDQMtlrppekvdlepLKSLDQEIaRPLENENQEF------LKSLKEESVEAVKSLE 822
Cdd:TIGR04523 585 EEKQELIDQKEKEKKDLIKEIEEKEKK------------ISSLEKEL-EKAKKENEKLssiiknIKSKKNKLKQEVKQIK 651
|
....*
gi 38176300 823 TEILE 827
Cdd:TIGR04523 652 ETIKE 656
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
522-1005 |
5.40e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.51 E-value: 5.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 522 EIWEEEDLNRKEIQDSQVPLEKETLKSlgEEIQESLKTLENQSHETLERENQECPRSLEEDLEtlKSLEKENKELLKDVE 601
Cdd:TIGR00618 358 RDAHEVATSIREISCQQHTLTQHIHTL--QQQKTTLTQKLQSLCKELDILQREQATIDTRTSA--FRDLQGQLAHAKKQQ 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 602 VvrpLEKEAVGQLKPTGKEDTQTLQSLQKENQELMKSL------EGNLETFLFPGTENQELVSSLqenLESLTALEKENQ 675
Cdd:TIGR00618 434 E---LQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLkereqqLQTKEQIHLQETRKKAVVLAR---LLELQEEPCPLC 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 676 EPLRSPEVGDEEALRPltKENQEPLRSLEDENKEAfrslekenQEPLKTLEEEDQSIVrpletenhKSLRSLEEQDQETL 755
Cdd:TIGR00618 508 GSCIHPNPARQDIDNP--GPLTRRMQRGEQTYAQL--------ETSEEDVYHQLTSER--------KQRASLKEQMQEIQ 569
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 756 RTLEKETQQRRRSlgeqdqmtlrppeKVDLEPLKSLDQEIaRPLENENQEFLKSLKEESVEAVKSLETEILESLKSAGQE 835
Cdd:TIGR00618 570 QSFSILTQCDNRS-------------KEDIPNLQNITVRL-QDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQ 635
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 836 NLEtlkspETQAPLWTPEEinQGAMNPLEKEIQEPLESVEVNQETF----RLLEEENQESLRSLGAWN------LENLRS 905
Cdd:TIGR00618 636 QCS-----QELALKLTALH--ALQLTLTQERVREHALSIRVLPKELlasrQLALQKMQSEKEQLTYWKemlaqcQTLLRE 708
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 906 PEEVDKESQRNLEEEENLGKGEYQEsLRSLEEEGQELPQSADVQRweDTVEKDQELAQESPPGMAGVENEDEAELNLREQ 985
Cdd:TIGR00618 709 LETHIEEYDREFNEIENASSSLGSD-LAAREDALNQSLKELMHQA--RTVLKARTEAHFNNNEEVTAALQTGAELSHLAA 785
|
490 500
....*....|....*....|.
gi 38176300 986 DGFTGKEEVVE-QGELNATEE 1005
Cdd:TIGR00618 786 EIQFFNRLREEdTHLLKTLEA 806
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
14-275 |
5.51e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.19 E-value: 5.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 14 ELNRRLEAYLARVKALEEQNELLSAELGGLRAQSADT--------SWRAHADDELAALRALVDQRWREKHAAEVARDNLA 85
Cdd:PRK02224 339 AHNEEAESLREDADDLEERAEELREEAAELESELEEAreavedrrEEIEELEEEIEELRERFGDAPVDLGNAEDFLEELR 418
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 86 EELEGVAGRCQQLRLARERTTEEVARNRRAVEAEKC--------------ARAWLSSQVAELERELEALRVAHE--EERV 149
Cdd:PRK02224 419 EERDELREREAELEATLRTARERVEEAEALLEAGKCpecgqpvegsphveTIEEDRERVEELEAELEDLEEEVEevEERL 498
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 150 GLNAQAACAPRCPAPPRGPPAPAPEVEELARRLGEAWRGAVRGYQERVAHMETSLGQARERLGRAVQGAREGRLELQQLQ 229
Cdd:PRK02224 499 ERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELN 578
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 38176300 230 AERGGLLERRAALEqrlegRWQERLRATEKFQLAVEALEQEKQGLQ 275
Cdd:PRK02224 579 SKLAELKERIESLE-----RIRTLLAAIADAEDEIERLREKREALA 619
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
17-290 |
7.79e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.07 E-value: 7.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 17 RRLEAYLARVKALEEQNELLS--AELGGLRAQSADTswRAHADDELAALRALVDQRwrEKHAAEVARDNLAEELEGVAGR 94
Cdd:COG4913 235 DDLERAHEALEDAREQIELLEpiRELAERYAAARER--LAELEYLRAALRLWFAQR--RLELLEAELEELRAELARLEAE 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 95 CQQLRLARERTTEEVARNRRAVEAEKcarawlSSQVAELERELEALRVaheeervglnaqaacaprcpapprgppapapE 174
Cdd:COG4913 311 LERLEARLDALREELDELEAQIRGNG------GDRLEQLEREIERLER-------------------------------E 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 175 VEELARRLGEawrgavrgYQERVAHMETSLGQARERLGRAVQGAREgrlELQQLQAERGGLLERRAALEQRLEgrwqerl 254
Cdd:COG4913 354 LEERERRRAR--------LEALLAALGLPLPASAEEFAALRAEAAA---LLEALEEELEALEEALAEAEAALR------- 415
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 38176300 255 rateKFQLAVEALEQEKQGLQSQI----AQVLEGRQQLAH 290
Cdd:COG4913 416 ----DLRRELRELEAEIASLERRKsnipARLLALRDALAE 451
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
498-936 |
8.42e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.83 E-value: 8.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 498 EGQIWGLVEKETAIEgKVVSSLQQEIWEEEDlNRKEIQDSQ-VPLEKETLKSLGEEIQESLKTLENQ--SHETLERENQE 574
Cdd:PRK03918 251 EGSKRKLEEKIRELE-ERIEELKKEIEELEE-KVKELKELKeKAEEYIKLSEFYEEYLDELREIEKRlsRLEEEINGIEE 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 575 CPRSLEEDLETLKSLEKENKELLKDVEVVRPLE------KEAVGQLKPTGKEDT-QTLQSLQKENQELMKSLEGNLETFL 647
Cdd:PRK03918 329 RIKELEEKEERLEELKKKLKELEKRLEELEERHelyeeaKAKKEELERLKKRLTgLTPEKLEKELEELEKAKEEIEEEIS 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 648 FPGTENQELVSSLQENLESLTALEKENQE-PLRSPEVGDEEALRpLTKENQEPLRSLEDENKEA---FRSLEKENQEPLK 723
Cdd:PRK03918 409 KITARIGELKKEIKELKKAIEELKKAKGKcPVCGRELTEEHRKE-LLEEYTAELKRIEKELKEIeekERKLRKELRELEK 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 724 TLEEEDQSIVRPLETENHKSLRS-LEEQDQETLRTLEKETQQRRRSLG--EQDQMTLrppeKVDLEPLKSLDQEIA---- 796
Cdd:PRK03918 488 VLKKESELIKLKELAEQLKELEEkLKKYNLEELEKKAEEYEKLKEKLIklKGEIKSL----KKELEKLEELKKKLAelek 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 797 --RPLENENQEFLKSLKEESVEAVKSLETEILE---------SLKSAGQE---NLETLKSPETQAPLwTPEEINQ--GAM 860
Cdd:PRK03918 564 klDELEEELAELLKELEELGFESVEELEERLKElepfyneylELKDAEKElerEEKELKKLEEELDK-AFEELAEteKRL 642
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 38176300 861 NPLEKEIQEPLesVEVNQETFRLLEEEnQESLRSLGAWNLENLRSPEEVDKESQRNLEE-EENLGK-GEYQESLRSLE 936
Cdd:PRK03918 643 EELRKELEELE--KKYSEEEYEELREE-YLELSRELAGLRAELEELEKRREEIKKTLEKlKEELEErEKAKKELEKLE 717
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
496-938 |
8.42e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 50.89 E-value: 8.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 496 EGEGQIWGLVEKETAIEGKVVS-SLQQEIWEEEDLNRKEIQDSQVPLEKETLKSLGEEIQESLKTLENQSHEtLERE--- 571
Cdd:pfam15921 275 EHEVEITGLTEKASSARSQANSiQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEE-LEKQlvl 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 572 -NQECPRS-LEEDLETLKS--LEKENKELLKDV---EVVRPLEKEAVGQLKPTGKEDTQTLQSLQKE----NQE------ 634
Cdd:pfam15921 354 aNSELTEArTERDQFSQESgnLDDQLQKLLADLhkrEKELSLEKEQNKRLWDRDTGNSITIDHLRRElddrNMEvqrlea 433
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 635 LMKSL----EGNLETFLFP---GTENQELVSSLQENLESLTALEKENQEPLRSPEV---GDEEALRPLTKENQEPLRSLE 704
Cdd:pfam15921 434 LLKAMksecQGQMERQMAAiqgKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMtleSSERTVSDLTASLQEKERAIE 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 705 DENKE--AFRSLEKENQEPLKTLEEEDQSIvRPLETENHKSLRSLEEQDQ--ETLRT-LEKETQ---QRRRSLGEQDQmt 776
Cdd:pfam15921 514 ATNAEitKLRSRVDLKLQELQHLKNEGDHL-RNVQTECEALKLQMAEKDKviEILRQqIENMTQlvgQHGRTAGAMQV-- 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 777 lrppEKVDLEplksldQEIA-RPLENenQEFlKSLKEESVEAVKSLETEI----LESLK--SAGQENLETLKspetqapl 849
Cdd:pfam15921 591 ----EKAQLE------KEINdRRLEL--QEF-KILKDKKDAKIRELEARVsdleLEKVKlvNAGSERLRAVK-------- 649
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 850 wtpeeinqgamnplekeiqeplesvEVNQETFRLLEEenQESLRSlgawNLENLRSPEEVDKESQRNLEEEENLGKGEYQ 929
Cdd:pfam15921 650 -------------------------DIKQERDQLLNE--VKTSRN----ELNSLSEDYEVLKRNFRNKSEEMETTTNKLK 698
|
....*....
gi 38176300 930 ESLRSLEEE 938
Cdd:pfam15921 699 MQLKSAQSE 707
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
619-999 |
8.51e-06 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 50.94 E-value: 8.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 619 KEDTQTLQSLQKENQELMKSLEGNLETFLFPGTENQELVSSLQENLESLTaLEKENQEPLRSPEVGDEEALRPLTKENQE 698
Cdd:PTZ00341 768 KKAAKKLEQRSKANKEELANENNKLMNILKEYFGNNEQINSITYNFENIN-LNEDNENGSKKILDLNHKDQKEIFEEIIS 846
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 699 -----PLRSLEDENKEAFRSLEKENQEPLKTLEEEDQSIVR--------PLETENHKSLRSLEEQD-----QETLRTLEK 760
Cdd:PTZ00341 847 yivdiSLSDIENTAKNAAEQILSDEGLDEKKLKKRAESLKKlanaiekyAGGGKKDKKAKKKDAKDlsgniAHEINLINK 926
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 761 ETQQRRRSLgeqdqmtlrpPEKVDLEPLKSLDQEIARPLENENQEFLKSLKEESVEavKSLETEILESLKSAGQENLEtl 840
Cdd:PTZ00341 927 ELKNQNENV----------PEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVE--ENVEENVEENVEENVEENVE-- 992
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 841 kspetqaplwtpEEINQGAMNPLEKEIQEPLE-SVEVNQETFRllEEENQESLRSLGAWNLENLRSPEE-----VDKESQ 914
Cdd:PTZ00341 993 ------------ENVEENVEENIEENVEENVEeNIEENVEEYD--EENVEEVEENVEEYDEENVEEIEEnaeenVEENIE 1058
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 915 RNLEEEENLGKGEYQESLRSLEEEGQELPQSADVQRWEDTVEKDQELAQEsppgmagvEN-EDEAELNLREQDGFTGKEE 993
Cdd:PTZ00341 1059 ENIEEYDEENVEEIEENIEENIEENVEENVEENVEEIEENVEENVEENAE--------ENaEENAEENAEEYDDENPEEH 1130
|
....*.
gi 38176300 994 VVEQGE 999
Cdd:PTZ00341 1131 NEEYDE 1136
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
108-307 |
9.91e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 50.40 E-value: 9.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 108 EVARNRRAVEAEKcARAWLSSQVAELERELEALRVAHEEER-----VGLNAQAacaprcpapprgpPAPAPEVEELARRL 182
Cdd:COG3206 163 EQNLELRREEARK-ALEFLEEQLPELRKELEEAEAALEEFRqknglVDLSEEA-------------KLLLQQLSELESQL 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 183 GEAwRGAVRGYQERVAHMETSLGQARERLGRAVQGAREGRL--ELQQLQAERGGLLER--------------RAALEQRL 246
Cdd:COG3206 229 AEA-RAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQLraQLAELEAELAELSARytpnhpdvialraqIAALRAQL 307
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 38176300 247 EGRWQERLRATEK----FQLAVEALEQEKQGLQSQIAQVLEGRQQLAHLKMSLSLEVATYRTLLE 307
Cdd:COG3206 308 QQEAQRILASLEAeleaLQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQ 372
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
8-272 |
1.43e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.07 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 8 ESFQMWELNRRLEAYLARVKALEEQNELLSAELGGLRAQSADTSWRAHA----------------DDELAALRALVDQRW 71
Cdd:TIGR02169 221 REYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEieqlleelnkkikdlgEEEQLRVKEKIGELE 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 72 REKHAAEVARDNLAEELEGVAGRCQQLRLARERTTEEVARNRRAVEAEKCARAWLSSQVAELERELEALRVaheeervgl 151
Cdd:TIGR02169 301 AEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRA--------- 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 152 naqaacaprcpapprgppapapEVEELARRLGEaWRGAVRGYQERVAHMETSLGQARERLGRAVQGAREGRLELQQLQAE 231
Cdd:TIGR02169 372 ----------------------ELEEVDKEFAE-TRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAA 428
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 38176300 232 RGGLLERRAALEQRLEGRWQERLRATEKFQLAVEALEQEKQ 272
Cdd:TIGR02169 429 IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQ 469
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
56-280 |
1.86e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 1.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 56 ADDELAALRALVDQRWREKHAAEVARDNLAEELEGVAGRCQQLRLARERTTEEVarNRRAVEAEkcarawlssqVAELER 135
Cdd:COG4913 608 NRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEI--DVASAERE----------IAELEA 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 136 ELEALRVAHeeervglnaqaacaprcpapprgppapaPEVEELARRLgEAWRGAVRGYQERVAHMETSLGQARERLGRAV 215
Cdd:COG4913 676 ELERLDASS----------------------------DDLAALEEQL-EELEAELEELEEELDELKGEIGRLEKELEQAE 726
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 38176300 216 QGARegRLELQQLQAERGGLLERRAALEQRLegrwqERLRATEKFQLAVEALEQEKQGLQSQIAQ 280
Cdd:COG4913 727 EELD--ELQDRLEAAEDLARLELRALLEERF-----AAALGDAVERELRENLEERIDALRARLNR 784
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
77-770 |
2.00e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.55 E-value: 2.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 77 AEVAR--DNLAEELEGVAGRCQQLRLARERTTEEVARNRRAVEAEKCARawLSSQVAELERELEALRVAHEEERVGLNAQ 154
Cdd:COG1196 209 AEKAEryRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEE--LEAELAELEAELEELRLELEELELELEEA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 155 AAcaprcpapprgppapapEVEELARRLGEAwRGAVRGYQERVAHMETSLGQARERLGRAVQGAREGRLELQQLQAERGG 234
Cdd:COG1196 287 QA-----------------EEYELLAELARL-EQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEE 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 235 LLERRAALEQRLEGRWQERLRATEKFQLAVEALEQEKQGLQSQIAQVLEGRQQLAHLKMSLSLEVATYRTLLEAENSRLQ 314
Cdd:COG1196 349 AEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 315 tpgggsktslsfqdpklelqfprtpegrrlgsllpvlsptslpsplpatletpvpaflknqeflqartptlastpipptp 394
Cdd:COG1196 --------------------------------------------------------------------------------
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 395 qapspavdAEIRAQDAPLSLLQTQGGRKQAPEPLRAEARVAIPASVLPGPEEPGGQRQEASTGQSPEDHASLAPPLSPDH 474
Cdd:COG1196 429 --------ALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAE 500
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 475 SSLEAKDGESG-GSRVFSICRGEGEGQIWGLVEK--ETAIEGKVVSSLQQEIWEEEDLNRKEIQDsqvpLEKETLKSLGE 551
Cdd:COG1196 501 ADYEGFLEGVKaALLLAGLRGLAGAVAVLIGVEAayEAALEAALAAALQNIVVEDDEVAAAAIEY----LKAAKAGRATF 576
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 552 EIQESLKTLENQSHETLERENQECPRSLEEDLETLKSLEKENKELLKDVEVVRPLEKEAVGQLKPTGKEDTQTLQSLQKE 631
Cdd:COG1196 577 LPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGG 656
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 632 NQELMKSLEGnletflfpGTENQELVSSLQENLESLTALEKENQEPLRSPEVGDEEALRPLTKENQEPLRSLEDENKEAF 711
Cdd:COG1196 657 SAGGSLTGGS--------RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEE 728
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 38176300 712 RSLEKENQEPLKTLEEEDQSIVRPLETEnhkslrsLEEQDQETLRTLEKETQQRRRSLG 770
Cdd:COG1196 729 QLEAEREELLEELLEEEELLEEEALEEL-------PEPPDLEELERELERLEREIEALG 780
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
13-273 |
3.80e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.78 E-value: 3.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 13 WELNRRLEAYLARVKALEEQNELLSAELGGLRAQSADtswRAHADDELAALRALVDQRWREKHAAEVARDNLAEELEGVA 92
Cdd:COG1196 323 EELAELEEELEELEEELEELEEELEEAEEELEEAEAE---LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA 399
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 93 GRCQQLRLARERTTEEVARNRRAVEAEkcarawLSSQVAELERELEALRVAHEEERVGLNAQAACAPRCPAPPRGPPAPA 172
Cdd:COG1196 400 AQLEELEEAEEALLERLERLEEELEEL------EEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 173 PEVEELARRLGEAWRGAVRGYQERVAHMETslgQARERLGRAVQGAREGRLELQQLQAERGGLLERRAALEQRLEGRWQE 252
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEADY---EGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQN 550
|
250 260
....*....|....*....|..
gi 38176300 253 RLRATEK-FQLAVEALEQEKQG 273
Cdd:COG1196 551 IVVEDDEvAAAAIEYLKAAKAG 572
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
75-310 |
4.26e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 4.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 75 HAAEVARDNLAEELEGVAGRCQQLRLARERTTEEVAR--------NRRAVEAEKCARAwLSSQVAELERELEALRVAHEE 146
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKAllkqlaalERRIAALARRIRA-LEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 147 ERVGLNAQAacaprcpapprgppapapevEELARRLGEAWRGAVRGYQERVAHMETSLGQARE-RLGRAVQGAREGRLE- 224
Cdd:COG4942 95 LRAELEAQK--------------------EELAELLRALYRLGRQPPLALLLSPEDFLDAVRRlQYLKYLAPARREQAEe 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 225 ----LQQLQAERGGLLERRAALEQRLEGRWQERLR---ATEKFQLAVEALEQEKQGLQSQIAQVLEGRQQLAHLKMSLSL 297
Cdd:COG4942 155 lradLAELAALRAELEAERAELEALLAELEEERAAleaLKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
250
....*....|...
gi 38176300 298 EVATYRTLLEAEN 310
Cdd:COG4942 235 EAAAAAERTPAAG 247
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
506-919 |
6.17e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 6.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 506 EKETAIEGKVVSSLQQ--EIWEEEDLNR-KEIQDSQVPLEKETLKSLGEEIQESLKTLENQSHETLERENQECPRSLEED 582
Cdd:PTZ00121 1532 EAKKADEAKKAEEKKKadELKKAEELKKaEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEE 1611
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 583 LETLKSLEKENKELLKDVEvvrplEKEAVGQLKPTGKEDTQTLQSLQKENQELMKSLEGNLETFLFPGTENQELVSSLQE 662
Cdd:PTZ00121 1612 AKKAEEAKIKAEELKKAEE-----EKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEED 1686
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 663 NLESLTALEKENQEPLRSPEVGDEEALRpltKENQEPLRSLEDENKEAFRSLEKENQE------PLKTLEEEDQSIVRPL 736
Cdd:PTZ00121 1687 EKKAAEALKKEAEEAKKAEELKKKEAEE---KKKAEELKKAEEENKIKAEEAKKEAEEdkkkaeEAKKDEEEKKKIAHLK 1763
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 737 ETENHKSLRSLEEQDQETLRTLEKETQQRRRSLGEQDQMTlrppeKVDLEPLKSLDQEiARPLENENQEFLKSLKEESVE 816
Cdd:PTZ00121 1764 KEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDI-----FDNFANIIEGGKE-GNLVINDSKEMEDSAIKEVAD 1837
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 817 AVKSLETEILESLKSAGQENLETLKSPETQAPlWTPEEINqgamnpLEKEIQEPLESVEVNQETFRLLEEENQESlrSLG 896
Cdd:PTZ00121 1838 SKNMQLEEADAFEKHKFNKNNENGEDGNKEAD-FNKEKDL------KEDDEEEIEEADEIEKIDKDDIEREIPNN--NMA 1908
|
410 420
....*....|....*....|...
gi 38176300 897 AWNLENLRSPEEVDKESQRNLEE 919
Cdd:PTZ00121 1909 GKNNDIIDDKLDKDEYIKRDAEE 1931
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
520-1028 |
7.12e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.83 E-value: 7.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 520 QQEIWEEEDLNRKEIQDSQVPLEKETLKslgeEIQESLKTLENQSHETLERENQECPRSLEEDLETLKSLEKENKELLKD 599
Cdd:PTZ00121 1269 QAAIKAEEARKADELKKAEEKKKADEAK----KAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKA 1344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 600 VEVVRPLEKEAVGQLKPTGKE---DTQTLQSLQKENQELMKSLEGNLETflfpgtenQELVSSLQENLESLTALEKENQE 676
Cdd:PTZ00121 1345 AEAAKAEAEAAADEAEAAEEKaeaAEKKKEEAKKKADAAKKKAEEKKKA--------DEAKKKAEEDKKKADELKKAAAA 1416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 677 PLRSPEV---GDEEALRPLTKENQEPLRSLEDENKEAfrsLEKENQEPLKTLEEE----DQSIVRPLETENHKSLRSLEE 749
Cdd:PTZ00121 1417 KKKADEAkkkAEEKKKADEAKKKAEEAKKADEAKKKA---EEAKKAEEAKKKAEEakkaDEAKKKAEEAKKADEAKKKAE 1493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 750 QDQETLRTLEKETQQRRRSLGEQDQMTLRPPEKVDLEPLKSLDQEIARPLENENQEFLKSLKE--ESVEAVKSLETEILE 827
Cdd:PTZ00121 1494 EAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEElkKAEEKKKAEEAKKAE 1573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 828 SLKSAGQENLETLKSPE---TQAPLWTPEEINQGAMNPLEKEIQEPLESVEVNQEtfrlleEENQESLRSLGAWNLENLR 904
Cdd:PTZ00121 1574 EDKNMALRKAEEAKKAEearIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKA------EEEKKKVEQLKKKEAEEKK 1647
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 905 SPEEVDKESQRNLEEEENLGKGEYQ-----ESLRSLEEE----GQELPQSADVQR--------WEDTVEKDQELAQESPP 967
Cdd:PTZ00121 1648 KAEELKKAEEENKIKAAEEAKKAEEdkkkaEEAKKAEEDekkaAEALKKEAEEAKkaeelkkkEAEEKKKAEELKKAEEE 1727
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 38176300 968 GMAGVENEDEAElnlrEQDGFTGKEEVVEQGELNATEEVWIPGEGHPESPEPKEQRGLVEG 1028
Cdd:PTZ00121 1728 NKIKAEEAKKEA----EEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEE 1784
|
|
| FUSC |
pfam04632 |
Fusaric acid resistance protein family; This family includes a conserved region found in two ... |
61-253 |
8.70e-05 |
|
Fusaric acid resistance protein family; This family includes a conserved region found in two proteins associated with fusaric acid resistance, from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.
Pssm-ID: 428044 [Multi-domain] Cd Length: 655 Bit Score: 47.28 E-value: 8.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 61 AALRALVDQRWRekHAAEVARDNLAEELEGVAGRCQQLRLARERTT---------EEVARNRRAVEAekcARAWLSSQVA 131
Cdd:pfam04632 155 PALRARLRARLR--DALRLAAAALAGAPGAEAFEAARLRLAADILAlealrshaaFESPRGRARARA---LRRLLARMLA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 132 ------ELERELEALRVAHEEERVGLnaqaacaprcpapprgppapapevEELARRLgEAWRGAV--RGYQERVAHMETS 203
Cdd:pfam04632 230 llprlrSLARLLARLRTEGAGTVPEL------------------------AALLDEL-AAWEAALaaEALQAALAALRAR 284
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 38176300 204 LGQARERLGRAVQGAREGRLELQQLQAERGGLLERRAALEQRLEGRWQER 253
Cdd:pfam04632 285 LRALRPALPLDFDTAAELLARLADLLAELAEALASCRALRHPIAQGARPA 334
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
542-942 |
1.54e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.60 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 542 EKETLKSLGEEIQESLKTLENQSHEtLERENQECPRSLEE---DLETLKSLEKENKELLKDVEvvrplekeavgqlkptg 618
Cdd:TIGR02169 682 RLEGLKRELSSLQSELRRIENRLDE-LSQELSDASRKIGEiekEIEQLEQEEEKLKERLEELE----------------- 743
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 619 kEDTQTLQSLQKENQELMKSLEGNLEtflfpgtENQELVSSLQENLESLTAleKENQEPLrsPEVGDE-EALRPLTKENQ 697
Cdd:TIGR02169 744 -EDLSSLEQEIENVKSELKELEARIE-------ELEEDLHKLEEALNDLEA--RLSHSRI--PEIQAElSKLEEEVSRIE 811
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 698 EPLRSLEDENKEafRSLEKENQEPLKtleEEDQSIVRPLEtENHKSLRSLEEQDQETLRTLE---KETQQRRRSLGEQdq 774
Cdd:TIGR02169 812 ARLREIEQKLNR--LTLEKEYLEKEI---QELQEQRIDLK-EQIKSIEKEIENLNGKKEELEeelEELEAALRDLESR-- 883
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 775 mtlrppekvdlepLKSLDQEIARpLENEnqefLKSLKEESVEAvkSLETEILESLKSAGQENLETLKSPETQAplwtpee 854
Cdd:TIGR02169 884 -------------LGDLKKERDE-LEAQ----LRELERKIEEL--EAQIEKKRKRLSELKAKLEALEEELSEI------- 936
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 855 inqGAMNPLEKEIQEPLESVEVNQETFRLLEEEnqesLRSLGAwnlENLRSPEEVDKESQRnleeeenlgKGEYQESLRS 934
Cdd:TIGR02169 937 ---EDPKGEDEEIPEEELSLEDVQAELQRVEEE----IRALEP---VNMLAIQEYEEVLKR---------LDELKEKRAK 997
|
....*...
gi 38176300 935 LEEEGQEL 942
Cdd:TIGR02169 998 LEEERKAI 1005
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
519-957 |
1.78e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 46.47 E-value: 1.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 519 LQQEIWEEEDLNRKEIQDSQvplEKETLKSLGEEIQESLKTLENQSHETLERENQECpRSLEEDLETLKSLEKENKELLK 598
Cdd:COG1196 318 LEELEEELAELEEELEELEE---ELEELEEELEEAEEELEEAEAELAEAEEALLEAE-AELAEAEEELEELAEELLEALR 393
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 599 DVEVVRPLEKEAVGQLKPTGKEDTQTLQSLQKENQELMKSLEGNLETFLfPGTENQELVSSLQENLESLTALEKENQEPL 678
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE-ALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 679 RSPEVGDEEALRPLTKEN------QEPLRSLEDENKEAFRSLEKENQEPLKTLEEEDQSIVRPLETENHKSLRSL----- 747
Cdd:COG1196 473 ALLEAALAELLEELAEAAarllllLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAAlqniv 552
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 748 --EEQDQETLRTLEKETQQRRRSLGEQDQMTLRPPEKVDLEPLKSLD-----QEIARPLENENQEFLKSLKEESVEAvKS 820
Cdd:COG1196 553 veDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAavdlvASDLREADARYYVLGDTLLGRTLVA-AR 631
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 821 LETEILESLKSAGQENLETLKSPE-TQAPLWTPEEINQGAMNPLEKEIQEPLESVEVNQETFRLLE--EENQESLRSLGA 897
Cdd:COG1196 632 LEAALRRAVTLAGRLREVTLEGEGgSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEalLAEEEEERELAE 711
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 898 WNLENLRSPEEVDKESQRNLEEEENLGKGEYQESLRSLEEEGQELPQSADVQRWEDTVEK 957
Cdd:COG1196 712 AEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELER 771
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
509-836 |
2.27e-04 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 45.72 E-value: 2.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 509 TAIEGKVVSSLQQEIWEEEDLNRKEIQDSQVPLEKE--TLKSLGEEIQESLKTLENQSHETLeRENQECPRSLEEDLETL 586
Cdd:COG5185 209 ESETGNLGSESTLLEKAKEIINIEEALKGFQDPESEleDLAQTSDKLEKLVEQNTDLRLEKL-GENAESSKRLNENANNL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 587 KSLEKENKELLKDVEVVRPLEK---EAVGQLKPTGKEdtQTLQSLQKENQELMKSLEGNLETFLFPGTENQElvsSLQEN 663
Cdd:COG5185 288 IKQFENTKEKIAEYTKSIDIKKateSLEEQLAAAEAE--QELEESKRETETGIQNLTAEIEQGQESLTENLE---AIKEE 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 664 LESLTAlekENQEPLRSPEVGDEEA-LRPLTKENQEPLRSLEDENKEAFRSLEKENQEPLKTLEE---EDQSIVRPLEtE 739
Cdd:COG5185 363 IENIVG---EVELSKSSEELDSFKDtIESTKESLDEIPQNQRGYAQEILATLEDTLKAADRQIEElqrQIEQATSSNE-E 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 740 NHKSLRSLEEQDQETLRTLEKETQQRRRSLGEQDQMTLRPPEKVDLEPLKSLDQEIARPLENENQEFLKSlkEESVEAVK 819
Cdd:COG5185 439 VSKLLNELISELNKVMREADEESQSRLEEAYDEINRSVRSKKEDLNEELTQIESRVSTLKATLEKLRAKL--ERQLEGVR 516
|
330
....*....|....*..
gi 38176300 820 SLETEILESLKSAGQEN 836
Cdd:COG5185 517 SKLDQVAESLKDFMRAR 533
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
19-324 |
2.82e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 45.72 E-value: 2.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 19 LEAYLARVKALEEQ--NELLSAELgglRAQSADTSWRAHaDDELAALRALVDQRWREKhAAEVARDNL--AEELEGVAGR 94
Cdd:PRK04863 440 AEDWLEEFQAKEQEatEELLSLEQ---KLSVAQAAHSQF-EQAYQLVRKIAGEVSRSE-AWDVARELLrrLREQRHLAEQ 514
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 95 CQQLRlARERTTEEVARNRRAVE---AEKCARawlSSQVAELERELEALRVAHEEERVGLNAQAAcaprcpapprgppap 171
Cdd:PRK04863 515 LQQLR-MRLSELEQRLRQQQRAErllAEFCKR---LGKNLDDEDELEQLQEELEARLESLSESVS--------------- 575
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 172 apeveelarrlgeawrgavrgyqervahmetSLGQARERLgravqgaregRLELQQLQAERggllerraaleQRLEGRWQ 251
Cdd:PRK04863 576 -------------------------------EARERRMAL----------RQQLEQLQARI-----------QRLAARAP 603
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 38176300 252 ERLRAtekfQLAVEALEQEKQGLQSQIAQVLEGRQQLAHLKMSLSLE---VATYRTLLEAENSRLQTPGGGSKTSL 324
Cdd:PRK04863 604 AWLAA----QDALARLREQSGEEFEDSQDVTEYMQQLLERERELTVErdeLAARKQALDEEIERLSQPGGSEDPRL 675
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
14-347 |
3.76e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 3.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 14 ELNRRLEAYLARVKALEEQNELLSAELGGLRAQSADTswRAHADDELAALRALVDQRWREKHAAEVARDNLAEELEGVAG 93
Cdd:COG4913 356 ERERRRARLEALLAALGLPLPASAEEFAALRAEAAAL--LEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 94 R---------------CQQLRLARE-----------RTTEEVARN-----------------------RRAVEAEKcARA 124
Cdd:COG4913 434 RksniparllalrdalAEALGLDEAelpfvgelievRPEEERWRGaiervlggfaltllvppehyaaaLRWVNRLH-LRG 512
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 125 WLSSQVAELERELEALRVAHE------------------EERVGLNAQAACAPRcpapprgppapapeVEELAR------ 180
Cdd:COG4913 513 RLVYERVRTGLPDPERPRLDPdslagkldfkphpfrawlEAELGRRFDYVCVDS--------------PEELRRhprait 578
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 181 ------RLGEAW----RGAVRGY-------QERVAHMETSLGQARERLGRAVQgaregrlELQQLQAERGGLLERRAALE 243
Cdd:COG4913 579 ragqvkGNGTRHekddRRRIRSRyvlgfdnRAKLAALEAELAELEEELAEAEE-------RLEALEAELDALQERREALQ 651
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 244 QRLEGRW---------------QERLRATEKFQLAVEALEQEKQGLQSQIAQVLEGRQQLAHLKMSLSLEVATYRTLLEA 308
Cdd:COG4913 652 RLAEYSWdeidvasaereiaelEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDE 731
|
410 420 430
....*....|....*....|....*....|....*....
gi 38176300 309 ENSRLQTPGGGSKTSLSFQdpkLELQFPRTPEGRRLGSL 347
Cdd:COG4913 732 LQDRLEAAEDLARLELRAL---LEERFAAALGDAVEREL 767
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
503-829 |
4.28e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.05 E-value: 4.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 503 GLVEKETAiEGKVVSSLQQEIWEEEDLNRKEIQDSQVPLEKETLKSLGEEIQESLKTLENQ----SHETLERENQEcprs 578
Cdd:PRK03918 452 ELLEEYTA-ELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKlkkyNLEELEKKAEE---- 526
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 579 LEEDLETLKSLEKENKELLKDVEVVRPLEKEavgqlkptgkedTQTLQSLQKENQELMKSLEGNLETFLFpgtenqELVS 658
Cdd:PRK03918 527 YEKLKEKLIKLKGEIKSLKKELEKLEELKKK------------LAELEKKLDELEEELAELLKELEELGF------ESVE 588
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 659 SLQENLESLTALEKENQEPLRSP-EVGDEEALRPLTKENQEPLRSLEDENKEAFRSLEKENQEPLKTLEEEDQSIVRPLE 737
Cdd:PRK03918 589 ELEERLKELEPFYNEYLELKDAEkELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEY 668
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 738 TENHKSLRSLEEQdQETLRTLEKETQQRRRSLGEQdqmtLRPPEKVDLEpLKSLDQEIARpLENENQEFLK---SLKEES 814
Cdd:PRK03918 669 LELSRELAGLRAE-LEELEKRREEIKKTLEKLKEE----LEEREKAKKE-LEKLEKALER-VEELREKVKKykaLLKERA 741
|
330
....*....|....*
gi 38176300 815 VEAVKSLETEILESL 829
Cdd:PRK03918 742 LSKVGEIASEIFEEL 756
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
60-272 |
4.40e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 4.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 60 LAALRALVDQRWREKHAAEVARDNLAEELEGVAGRCQQLRLARERTTEEVARNRRAVEAEKCARAWLSSQVAELERELEA 139
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 140 LRVAHEEERVGLNAQAACAPRCPAPPRGPPAPAPE-VEELARRLG---------EAWRGAVRGYQERVAHMETSLGQARE 209
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPPLALLLSPEdFLDAVRRLQylkylaparREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38176300 210 RLGRAVQGAREGRLELQQLQAERGGLLERRAALEQRLEGRWQERLRATEKFQLAVEALEQEKQ 272
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
14-245 |
5.10e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 5.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 14 ELNRRLEAYLARVKALEEQNELLSAElgglRAQSADTSWRAHADDELAALRALVDQRwrekHAAEVARDNLAEELEGVAG 93
Cdd:COG4913 259 ELAERYAAARERLAELEYLRAALRLW----FAQRRLELLEAELEELRAELARLEAEL----ERLEARLDALREELDELEA 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 94 RCQQLRLARertteevarnrraveaekcarawlssqVAELERELEALRVAHEEervglnaqaacaprcpapprgPPAPAP 173
Cdd:COG4913 331 QIRGNGGDR---------------------------LEQLEREIERLERELEE---------------------RERRRA 362
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 38176300 174 EVEELARRLGEAWRGAVRGYQERVAHMETSLGQARERLGRAVQGAREGRLELQQLQAERGGLLERRAALEQR 245
Cdd:COG4913 363 RLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERR 434
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
544-938 |
6.35e-04 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 44.82 E-value: 6.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 544 ETLKSLGEEIQESLKTLENQSHETLERENQ-----ECPRSLEEDLETLKSLEKENKELLKDVE--VVRPLEK-EAVGQLK 615
Cdd:PTZ00440 508 NSIKEKNNIVNNNFKNIEDYYITIEGLKNEiegliELIKYYLQSIETLIKDEKLKRSMKNDIKnkIKYIEENvDHIKDII 587
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 616 PTGKEDTQTLQSLQKENQELMKslegNLETFLFPGTENQELVS---------SLQENLESLTALEKENQEPLRSPE-VGD 685
Cdd:PTZ00440 588 SLNDEIDNIIQQIEELINEALF----NKEKFINEKNDLQEKVKyilnkfykgDLQELLDELSHFLDDHKYLYHEAKsKED 663
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 686 EEALRPLTKENQEPLRSLE-DENKEAFRSLEKENQEpLKTLEEedqSIVRpletenhKSLRSLEEQDQETLRTLEKETQQ 764
Cdd:PTZ00440 664 LQTLLNTSKNEYEKLEFMKsDNIDNIIKNLKKELQN-LLSLKE---NIIK-------KQLNNIEQDISNSLNQYTIKYND 732
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 765 RRRSLGEQdqmtlrppeKVDLEPLKSLDQEIarplENENQEFLKSLKE--ESVEAVKSLETEILeslksagqENLETLKS 842
Cdd:PTZ00440 733 LKSSIEEY---------KEEEEKLEVYKHQI----INRKNEFILHLYEndKDLPDGKNTYEEFL--------QYKDTILN 791
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 843 PETQaplwTPEEINQgaMNPLEKEIQEPLESVEVNQETFRLLEEENQESLRSLgawnLENLrsPEEVDKESQRNLEEEEN 922
Cdd:PTZ00440 792 KENK----ISNDINI--LKENKKNNQDLLNSYNILIQKLEAHTEKNDEELKQL----LQKF--PTEDENLNLKELEKEFN 859
|
410
....*....|....*.
gi 38176300 923 LGKGEYQESLRSLEEE 938
Cdd:PTZ00440 860 ENNQIVDNIIKDIENM 875
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
526-941 |
7.33e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 7.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 526 EEDLNRKEIQDSQVPLEKETLKSlgEEIQESLKTLENQSHETleRENQECPRSLEED---LETLKSLEKENK---ELLKD 599
Cdd:PTZ00121 1351 EAEAAADEAEAAEEKAEAAEKKK--EEAKKKADAAKKKAEEK--KKADEAKKKAEEDkkkADELKKAAAAKKkadEAKKK 1426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 600 VEVVRPL--------EKEAVGQLKPTGkEDTQTLQSLQKENQELMKSLEgnLETFLFPGTENQELVSSLQENLESLTALE 671
Cdd:PTZ00121 1427 AEEKKKAdeakkkaeEAKKADEAKKKA-EEAKKAEEAKKKAEEAKKADE--AKKKAEEAKKADEAKKKAEEAKKKADEAK 1503
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 672 KENQEPLRSpevgdEEALRPLTKENQEPLRSLEDENK--EAFRSLEKENQEPLKTLEE----EDQSIV---RPLETENHK 742
Cdd:PTZ00121 1504 KAAEAKKKA-----DEAKKAEEAKKADEAKKAEEAKKadEAKKAEEKKKADELKKAEElkkaEEKKKAeeaKKAEEDKNM 1578
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 743 SLRSLEEQDQ-ETLRTLEKETQQRRRSLGEQDQMTLRPPEKVDLEPLKSLDQEiarpleNENQEFLKSLKEESVEAVKSL 821
Cdd:PTZ00121 1579 ALRKAEEAKKaEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEE------KKKVEQLKKKEAEEKKKAEEL 1652
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 822 ETEILESLKSAGQENLETLKSPETQAPLWTPEEINQGAMNPLEKEIQEPLESVEVNQ---------ETFRLLEEENQESL 892
Cdd:PTZ00121 1653 KKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKkeaeekkkaEELKKAEEENKIKA 1732
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 38176300 893 RSLG------AWNLENLRSPEEVDKESQRNLEEEENLGKGEYQESLRSLEEEGQE 941
Cdd:PTZ00121 1733 EEAKkeaeedKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDE 1787
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
14-318 |
8.16e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.17 E-value: 8.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 14 ELNRRLEAYLARVKALEEQNELLSAELG-------GLRAQSADtswRAHADDEL--------AALRALVDQRwREKHAAE 78
Cdd:COG3096 358 ELTERLEEQEEVVEEAAEQLAEAEARLEaaeeevdSLKSQLAD---YQQALDVQqtraiqyqQAVQALEKAR-ALCGLPD 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 79 VARDNLAEELEGVAGRCQQ-----LRLARERTTEEVARNR--RAVEAekcarawLSSQVAELERElEALRVAHEEERVG- 150
Cdd:COG3096 434 LTPENAEDYLAAFRAKEQQateevLELEQKLSVADAARRQfeKAYEL-------VCKIAGEVERS-QAWQTARELLRRYr 505
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 151 -LNAQAAcaprcpapprgppapapEVEELARRLGEAWRGAVRgyQERVAHMETSLGQareRLGRAVQGAREGRLELQQLQ 229
Cdd:COG3096 506 sQQALAQ-----------------RLQQLRAQLAELEQRLRQ--QQNAERLLEEFCQ---RIGQQLDAAEELEELLAELE 563
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 230 AERGGLL-------ERRAALEQRLE--GRWQERLRATEKFQL-AVEALEQekqgLQSQIAQVLEGRQQL-AHLKMSLSLE 298
Cdd:COG3096 564 AQLEELEeqaaeavEQRSELRQQLEqlRARIKELAARAPAWLaAQDALER----LREQSGEALADSQEVtAAMQQLLERE 639
|
330 340
....*....|....*....|....*....
gi 38176300 299 ---------VATYRTLLEAENSRLQTPGG 318
Cdd:COG3096 640 reatverdeLAARKQALESQIERLSQPGG 668
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
552-938 |
9.31e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 44.27 E-value: 9.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 552 EIQESLKTLENQShetlerenQECPRSLEEDLETLKSLEKENKELLKDVEVVRPLEKEAVGQLkptgKEDTQTLQSLQKE 631
Cdd:TIGR00606 692 ELQEFISDLQSKL--------RLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEI----PELRNKLQKVNRD 759
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 632 NQELMKSLEgnletflfpgtENQELVSSLQENLESLTALEKenqeplrspEVGDEEALRPLTKENQEPLRSL--EDENKE 709
Cdd:TIGR00606 760 IQRLKNDIE-----------EQETLLGTIMPEEESAKVCLT---------DVTIMERFQMELKDVERKIAQQaaKLQGSD 819
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 710 AFRSLEKENQEpLKTLEEEDQSIVRPLEtENHKSLRSLEEQDQEtLRTLEKETQQRRRSLGEQDQMTLRPPEKVD--LEP 787
Cdd:TIGR00606 820 LDRTVQQVNQE-KQEKQHELDTVVSKIE-LNRKLIQDQQEQIQH-LKSKTNELKSEKLQIGTNLQRRQQFEEQLVelSTE 896
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 788 LKSLDQEI--ARPLENENQEFLKSLKEESVEAVKSLETEileslKSAGQENLETLKspetqaplwtpEEINQ--GAMNPL 863
Cdd:TIGR00606 897 VQSLIREIkdAKEQDSPLETFLEKDQQEKEELISSKETS-----NKKAQDKVNDIK-----------EKVKNihGYMKDI 960
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 864 EKEIQEPLESVEVNQET----FRLLEEENQESLRSLGawnlENLRS-PEEVDKESQRNLEEEENLGKGEYQESLRSLEEE 938
Cdd:TIGR00606 961 ENKIQDGKDDYLKQKETelntVNAQLEECEKHQEKIN----EDMRLmRQDIDTQKIQERWLQDNLTLRKRENELKEVEEE 1036
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
649-1006 |
9.48e-04 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 44.01 E-value: 9.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 649 PGTENQELVSSLQENLESLTALEKENQEPLRSpEVGDEEALRPLTKeNQEPLRSLEDeNKEAFRSLEKENQEPLKTLEEE 728
Cdd:PTZ00341 767 PKKAAKKLEQRSKANKEELANENNKLMNILKE-YFGNNEQINSITY-NFENINLNED-NENGSKKILDLNHKDQKEIFEE 843
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 729 DQSIVRPL---ETEN-----HKSLRSLEEQDQETLR----TLEKETQQRRRSLGEQdqmtlRPPEKVDLEPLKSLDQEIA 796
Cdd:PTZ00341 844 IISYIVDIslsDIENtaknaAEQILSDEGLDEKKLKkraeSLKKLANAIEKYAGGG-----KKDKKAKKKDAKDLSGNIA 918
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 797 RPLENENQEfLKSLKEESVEAVK-----SLETEILESLKSAGQENLEtlkspetqaplwtpEEINQGAMNPLEKEIQEPL 871
Cdd:PTZ00341 919 HEINLINKE-LKNQNENVPEHLKehaeaNIEEDAEENVEEDAEENVE--------------ENVEENVEENVEENVEENV 983
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 872 E-SVEVNQETFrllEEENQEslrslgawnlENLRspEEVDKESQRNLEEEENlgkgEYQESLRSLEEEGQELPQSADVQR 950
Cdd:PTZ00341 984 EeNVEENVEEN---VEENVE----------ENIE--ENVEENVEENIEENVE----EYDEENVEEVEENVEEYDEENVEE 1044
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 38176300 951 WEDTVEKDQELAQESPPGMAGVENEDEAELNLR---EQDGFTGKEEVVEQGELNATEEV 1006
Cdd:PTZ00341 1045 IEENAEENVEENIEENIEEYDEENVEEIEENIEeniEENVEENVEENVEEIEENVEENV 1103
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
14-280 |
1.27e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.77 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 14 ELNRRLEAYLARVKALEEQNELLSAELGGLRAQSADTSWRAHADDELAALRA--LVDQRWREKHAAEVARDNLAEELEG- 90
Cdd:COG1196 498 EAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQniVVEDDEVAAAAIEYLKAAKAGRATFl 577
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 91 ---VAGRCQQLRLARERTTEEVARNRRAVEAEKCARAWLSSQVAELERELEALR--------VAHEEERVGLNAQAACAP 159
Cdd:COG1196 578 pldKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARleaalrraVTLAGRLREVTLEGEGGS 657
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 160 RCPAPPRGPPAPAPEVEELARRLGEAWRGAVRGYQERVAHMETSLGQARERLGRAVQGAREGRLELQQLQAERGGLLERR 239
Cdd:COG1196 658 AGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREEL 737
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 38176300 240 AALEQRLEGRWQERLRATEKFQLAVEALEQEKQGLQSQIAQ 280
Cdd:COG1196 738 LEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
111-289 |
1.68e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 111 RNRRAVEAEKCARAWLSSQVAELERELEALRVAHEEERVGLNAQAACAPRCPAPPrgppapapEVEELARRLGEAwrgav 190
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEI--------DVASAEREIAEL----- 673
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 191 rgyQERVAHMETS---LGQARERLGRAVQGAREGRLELQQLQAERGGLLERRAALEQRLE------------GRWQERLR 255
Cdd:COG4913 674 ---EAELERLDASsddLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDelqdrleaaedlARLELRAL 750
|
170 180 190
....*....|....*....|....*....|....*.
gi 38176300 256 ATEKF-QLAVEALEQE-KQGLQSQIAQVLEGRQQLA 289
Cdd:COG4913 751 LEERFaAALGDAVERElRENLEERIDALRARLNRAE 786
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
58-313 |
2.05e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.72 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 58 DELAALRALVDQRWREKHAAEVARDNLAEELEGVAGRCQQLRLARERTTEEVARNRRAVEAEKCARAWLSSQVAELEREL 137
Cdd:PRK02224 251 EELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRL 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 138 EALRV---AHEEERVGLNAQAAcaprcpAPPRGPPAPAPEVEELARRLGEAwRGAVRGYQERVAHMETSLGQARERLGRA 214
Cdd:PRK02224 331 EECRVaaqAHNEEAESLREDAD------DLEERAEELREEAAELESELEEA-REAVEDRREEIEELEEEIEELRERFGDA 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 215 -VQ-GAREGRLELqqLQAERGGLLERRAALEQRLEGRwQERLRATEKFQLAVEALEQEKQGLQSQIAQVL-EGRQQLAhl 291
Cdd:PRK02224 404 pVDlGNAEDFLEE--LREERDELREREAELEATLRTA-RERVEEAEALLEAGKCPECGQPVEGSPHVETIeEDRERVE-- 478
|
250 260
....*....|....*....|..
gi 38176300 292 kmSLSLEVATYRTLLEAENSRL 313
Cdd:PRK02224 479 --ELEAELEDLEEEVEEVEERL 498
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
528-840 |
2.13e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.74 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 528 DLNRKEIQDSQVPLEKETLKSLGEEIQESLKTLEnQSHETLERENQEcprsLEEDLETLKSLEKENKELLKDVEVVRPLE 607
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELE-EKLEELRLEVSE----LEEEIEELQKELYALANEISRLEQQKQIL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 608 KEAVGQLKPTGKEDTQTLQSLQKENQELMKSLegnletflfpgTENQELVSSLQENLESLTALEKENQEplrspevgDEE 687
Cdd:TIGR02168 308 RERLANLERQLEELEAQLEELESKLDELAEEL-----------AELEEKLEELKEELESLEAELEELEA--------ELE 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 688 ALRPLTKENQEPLRSLEDENKEAFRSLEKENQEpLKTLEEEDQSIvrpleTENHKSLRSLEEQDQETLRTLEKETQQRRR 767
Cdd:TIGR02168 369 ELESRLEELEEQLETLRSKVAQLELQIASLNNE-IERLEARLERL-----EDRRERLQQEIEELLKKLEEAELKELQAEL 442
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38176300 768 SLGEQDQMTLRPPEKVDLEPLKSLDQEIArplenENQEFLKSLKEEsvEAVKSLETEILESLksagQENLETL 840
Cdd:TIGR02168 443 EELEEELEELQEELERLEEALEELREELE-----EAEQALDAAERE--LAQLQARLDSLERL----QENLEGF 504
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
190-315 |
2.16e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 190 VRGYQERVAHMETSLGQARE-----RLGRAVQGAREGRLELQQLQAERGGLLERRAALEQRLEGRwQERLRATEKfQLA- 263
Cdd:COG4913 257 IRELAERYAAARERLAELEYlraalRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDAL-REELDELEA-QIRg 334
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 38176300 264 -----VEALEQEKQGLQSQIAQVLEGR----QQLAHLKMSLSLEVATYRTLLEAENSRLQT 315
Cdd:COG4913 335 nggdrLEQLEREIERLERELEERERRRarleALLAALGLPLPASAEEFAALRAEAAALLEA 395
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
126-817 |
2.44e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.65 E-value: 2.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 126 LSSQVAELERELEALRVAHEEERVGLNAQAACAPRCPAPPRGPPAPAPE--VEELAR-RLGEAWRGAVRGYQERVAHMET 202
Cdd:TIGR00618 181 LALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKhlREALQQtQQSHAYLTQKREAQEEQLKKQQ 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 203 SLGQARERLGRAVqgAREGRLELQQLQAERGGLLERRAALEQRLEGRWQERLRATEKFQLAVEALEQEKQGLQSQIAQVL 282
Cdd:TIGR00618 261 LLKQLRARIEELR--AQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQS 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 283 EGRQQLAHLKMSLSLEVATYRTLLEAENSRLQtpgggSKTSLSFQDPKLELQFPRTPEGRRLGSLLPVLS------PTSL 356
Cdd:TIGR00618 339 SIEEQRRLLQTLHSQEIHIRDAHEVATSIREI-----SCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDilqreqATID 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 357 PSPLPATLETPVPAFLKNQEFLQARTPTLASTPIPPTPQAPSPAVDAEIRAQDAPLSLLQTQGGRKQAPEplRAEARVAI 436
Cdd:TIGR00618 414 TRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHL--QETRKKAV 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 437 PASVLPgpEEPGGQRQEASTGQSPEDHASLAPPLSPDHSSLEA-----KDGESGGSRVFSICRGEGEgQIWGLVEKETAI 511
Cdd:TIGR00618 492 VLARLL--ELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRgeqtyAQLETSEEDVYHQLTSERK-QRASLKEQMQEI 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 512 --EGKVVSSLQQEIWEEEDLNRKEIQDSQ--VPLEKETLKSLGEEIQESLKTLENQSH-ETLERENQECPRSLEEDLETL 586
Cdd:TIGR00618 569 qqSFSILTQCDNRSKEDIPNLQNITVRLQdlTEKLSEAEDMLACEQHALLRKLQPEQDlQDVRLHLQQCSQELALKLTAL 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 587 kslEKENKELLKDVE-------VVRPLEKEAVGQLKPTGKEDTQTLQSLQKEN----QELMKSLEGNLETFLFPGTENQE 655
Cdd:TIGR00618 649 ---HALQLTLTQERVrehalsiRVLPKELLASRQLALQKMQSEKEQLTYWKEMlaqcQTLLRELETHIEEYDREFNEIEN 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 656 LVSSLQENL--------ESLTALEKENQEPLRSPEVGDEEALRPLTKENQEpLRSLED--ENKEAFRSLEKENQEPLKTL 725
Cdd:TIGR00618 726 ASSSLGSDLaaredalnQSLKELMHQARTVLKARTEAHFNNNEEVTAALQT-GAELSHlaAEIQFFNRLREEDTHLLKTL 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 726 EEEDQSIVRPLETENHKSLRSLEEQDQETLRTLEKETQqrrrSLGEQDQMTLRPPEKvdLEPLKSLDQEIARPLENENQE 805
Cdd:TIGR00618 805 EAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSA----TLGEITHQLLKYEEC--SKQLAQLTQEQAKIIQLSDKL 878
|
730
....*....|..
gi 38176300 806 FLKSLKEESVEA 817
Cdd:TIGR00618 879 NGINQIKIQFDG 890
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
30-287 |
2.64e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.72 E-value: 2.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 30 EEQNELLSAELGGLRAQSADTSWRAHADDELAALRALVDQRWREKHAAEVARDNLAEELEGVAGRCQQLR-----LARER 104
Cdd:PRK02224 474 RERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELReraaeLEAEA 553
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 105 TTEEVARNRRAVEAEKCARAwlssqVAELERELEALrvahEEERVGLNAQAACAPRCPAPPRGPPAPAPEVEELARRLGE 184
Cdd:PRK02224 554 EEKREAAAEAEEEAEEAREE-----VAELNSKLAEL----KERIESLERIRTLLAAIADAEDEIERLREKREALAELNDE 624
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 185 AwRGAVRGYQERVAHMETSLG-----QARERLGRAVQGAREGRLELQQLQAERGGLLERRAALEQRLE--GRWQERLRAT 257
Cdd:PRK02224 625 R-RERLAEKRERKRELEAEFDearieEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEelEELRERREAL 703
|
250 260 270
....*....|....*....|....*....|.
gi 38176300 258 EKFQLAVEALEQEKQGLQSQIAQV-LEGRQQ 287
Cdd:PRK02224 704 ENRVEALEALYDEAEELESMYGDLrAELRQR 734
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
544-771 |
3.31e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.15 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 544 ETLKSLGEEIQESLKTLENQSHETLERENQEcprsLEEDLETL-KSLEKE---NKELLKDVEVVRPLEKEAVGQLKPTGK 619
Cdd:pfam06160 237 KEIQQLEEQLEENLALLENLELDEAEEALEE----IEERIDQLyDLLEKEvdaKKYVEKNLPEIEDYLEHAEEQNKELKE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 620 E-------------DTQTLQSLQKENQELMKSLEGNLETFlfpgtENQELVSS-----LQENLESLTALEKEnqeplrsp 681
Cdd:pfam06160 313 ElervqqsytlnenELERVRGLEKQLEELEKRYDEIVERL-----EEKEVAYSelqeeLEEILEQLEEIEEE-------- 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 682 evgdeealrplTKENQEPLRSLEDENKEAfrslekenQEPLKTLEEEDQSIVRPLETENhksLRSLEEQDQETLRTLEKE 761
Cdd:pfam06160 380 -----------QEEFKESLQSLRKDELEA--------REKLDEFKLELREIKRLVEKSN---LPGLPESYLDYFFDVSDE 437
|
250
....*....|
gi 38176300 762 TQQRRRSLGE 771
Cdd:pfam06160 438 IEDLADELNE 447
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
577-848 |
4.83e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.85 E-value: 4.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 577 RSLEEDLETLKSLEKENKELLKDVEVVRPLEKEAVGQLKPTGKEDTQTLQSLQKENQELMKSLEGNLETFLFPGTENQEL 656
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRREL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 657 VSSLQENLESLTALEKENQEplRSPEVGDEEALRPLTKENQEPLRSLEDENKEAFRSLEKENQEPLKTLEEEDQSIVRPL 736
Cdd:COG1196 315 EERLEELEEELAELEEELEE--LEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 737 ETENHKSLRSLEEQDQETLRTLEKETQQRRRSLGEQDQMTLRPPEKVDLEPLKSLDQEIARPLENENQEFLKSLKEESVE 816
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
250 260 270
....*....|....*....|....*....|..
gi 38176300 817 AVKSLETEILESLKSAGQENLETLKSPETQAP 848
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLLLLEAEADYE 504
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
35-299 |
5.07e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 5.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 35 LLSAELGGLRAQSADTSWRAHADDELAALRALVDQRWRE-KHAAEVARDNLAEELEGVAGRCQQLRLARERTTEEVARNR 113
Cdd:COG4717 285 LLALLFLLLAREKASLGKEAEELQALPALEELEEEELEElLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQ 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 114 RAVEAEKCARAWLSSQVAELErELEALRVAHEEERvglnaqaacaprcpapprgppAPAPEVEELARRLGEAWRGAVRGY 193
Cdd:COG4717 365 LEELEQEIAALLAEAGVEDEE-ELRAALEQAEEYQ---------------------ELKEELEELEEQLEELLGELEELL 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 194 --------QERVAHMETSLGQARERLGRAVQgaREGRLELQQLQAERGGLLERRAALEQRLEGRWQERLRATEKFQLAVE 265
Cdd:COG4717 423 ealdeeelEEELEELEEELEELEEELEELRE--ELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWAALKLALE 500
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 38176300 266 ALEQEKQGLQSQ------------IAQVLEGRQQLAHLKMSLSLEV 299
Cdd:COG4717 501 LLEEAREEYREErlppvleraseyFSRLTDGRYRLIRIDEDLSLKV 546
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
527-841 |
8.65e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 40.86 E-value: 8.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 527 EDLNRKEIQDSQVPLEKETLKSLGEEIQESLKTLENQ------SHETLERENQE-----CPRSLEEDLETLKSLEKENKE 595
Cdd:pfam05483 466 EEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKeltqeaSDMTLELKKHQediinCKKQEERMLKQIENLEEKEMN 545
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 596 LLKDVEVVRPLEKEAVGQLK---PTGKEDTQTLQSLQKENQELMKSLEGNLETFLFPGTENQELVSSLQENLESLTALEK 672
Cdd:pfam05483 546 LRDELESVREEFIQKGDEVKcklDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGS 625
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 673 ENQEPLRSPEVGDEEALRPLTKENQEPLRSLEDENKEAfrSLEKENQEPLKTLEEEDQSIVRPLETENHKSLRSLEEQDQ 752
Cdd:pfam05483 626 AENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEI--EDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIA 703
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 753 ETLRTLEKETQQRRRSLGEQDQmtlrppeKVDLEPLKSLDQEIAR-PLENEnqefLKSLKEESVEAVKSLETEI--LESL 829
Cdd:pfam05483 704 EMVALMEKHKHQYDKIIEERDS-------ELGLYKNKEQEQSSAKaALEIE----LSNIKAELLSLKKQLEIEKeeKEKL 772
|
330
....*....|..
gi 38176300 830 KSAGQENLETLK 841
Cdd:pfam05483 773 KMEAKENTAILK 784
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
498-941 |
9.66e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.82 E-value: 9.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 498 EGQIWGLVEKETAIEGKVVSSLQQEIWEEEDLN----RKEIQDSQVPLEKETLKSlgEEIQESLKTLENQSHETLERENQ 573
Cdd:PRK03918 134 QGEIDAILESDESREKVVRQILGLDDYENAYKNlgevIKEIKRRIERLEKFIKRT--ENIEELIKEKEKELEEVLREINE 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 574 ECP--RSLEEDLETLK--------------SLEKENKELLKDVEVvrplEKEAVGQLKPTGKEDTQTLQSLQKENQELmK 637
Cdd:PRK03918 212 ISSelPELREELEKLEkevkeleelkeeieELEKELESLEGSKRK----LEEKIRELEERIEELKKEIEELEEKVKEL-K 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 638 SLEGNLETFLFPGTENQELVSSLQE---NLESLTALEKENQEPLRSPEvGDEEALRPLTKENQEPLRSLEdENKEAFRSL 714
Cdd:PRK03918 287 ELKEKAEEYIKLSEFYEEYLDELREiekRLSRLEEEINGIEERIKELE-EKEERLEELKKKLKELEKRLE-ELEERHELY 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 715 EKenqepLKTLEEEDQSIVRPLETEN----HKSLRSLEEQDQETLRTLEKETQQRRRSLGEQDQMtlrppeKVDLEPLKS 790
Cdd:PRK03918 365 EE-----AKAKKEELERLKKRLTGLTpeklEKELEELEKAKEEIEEEISKITARIGELKKEIKEL------KKAIEELKK 433
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 791 LDQE---IARPLENENQeflKSLKEESVEAVKSLETEI--LESLKSAGQENLETLKSPETQAPLWTPEEINQGAMNPLEK 865
Cdd:PRK03918 434 AKGKcpvCGRELTEEHR---KELLEEYTAELKRIEKELkeIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEE 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38176300 866 EIQE-PLESVEVNQETFRLLEEENQE---SLRSLgawnLENLRSPEEVDKESqRNLEEEENLGKGEYQESLRSLEEEGQE 941
Cdd:PRK03918 511 KLKKyNLEELEKKAEEYEKLKEKLIKlkgEIKSL----KKELEKLEELKKKL-AELEKKLDELEEELAELLKELEELGFE 585
|
|
| |
