|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 714.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 1 MTMNHRKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 81 RNMHANGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNT 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 161 LVQWIWGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 241 LTLTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 5835747 321 LTQTLFWSFIANLLVLTWIGGQPVENPFITIGQVASILYFSTLLILIPIAGVIENKML 378
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKML 378
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-374 |
4.89e-132 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 383.37 E-value: 4.89e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 10 PLTKIINNsFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGAS 89
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 90 LFFMCIYLHIGRGLYYGSylYKE----TWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWI 165
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 166 WGGFSVDNATLTRFFTLH-FLLPFTIMGLTMVHLLFLHETGSNNPTG----LNSNTDKIPFHPYFSYKDLLGVILMLTLL 240
Cdd:COG1290 176 FGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVF 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 241 LTLTLFSPNllGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLLSILVLFLMPALHTSKQRTTQF 318
Cdd:COG1290 256 ALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRY 333
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 5835747 319 RPLTQTLFWSFIANLLVLTWIGGQPVenPFITIGQVASILYFSTLLILIPIAGVIE 374
Cdd:COG1290 334 RPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
5.20e-99 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 292.35 E-value: 5.20e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 10 PLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 90 LFFMCIYLHIGRGLYYGSY--LYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 5835747 168 GFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
2.79e-89 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 266.94 E-value: 2.79e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 19 FIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 99 IGRGLYYG--SYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWIWGGFSVDNATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 5835747 177 TRFFTLHFLLPFTIMGLTMVHLLFLHETG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-340 |
7.48e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 51.34 E-value: 7.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 259 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQF-RPLTQTLfwsFIANLLVLT 337
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTV---FLFGTVVAL 141
|
...
gi 5835747 338 WIG 340
Cdd:TIGR01156 142 WLG 144
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 714.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 1 MTMNHRKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 81 RNMHANGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNT 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 161 LVQWIWGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 241 LTLTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 5835747 321 LTQTLFWSFIANLLVLTWIGGQPVENPFITIGQVASILYFSTLLILIPIAGVIENKML 378
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKML 378
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
3-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 687.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 3 MNHRKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRN 82
Cdd:MTH00131 2 ASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 83 MHANGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLV 162
Cdd:MTH00131 82 LHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 163 QWIWGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLLLT 242
Cdd:MTH00131 162 QWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 243 LTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRPLT 322
Cdd:MTH00131 242 LALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLT 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 5835747 323 QTLFWSFIANLLVLTWIGGQPVENPFITIGQVASILYFSTLLILIPIAGVIENKML 378
Cdd:MTH00131 322 QFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKAL 377
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 687.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 1 MTmNHRKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00100 1 MT-NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWII 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 81 RNMHANGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNT 160
Cdd:MTH00100 80 RYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 161 LVQWIWGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLL 240
Cdd:MTH00100 160 LVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 241 LTLTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRP 320
Cdd:MTH00100 240 MLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRP 319
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 5835747 321 LTQTLFWSFIANLLVLTWIGGQPVENPFITIGQVASILYFSTLLILIPIAGVIENKML 378
Cdd:MTH00100 320 LSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLL 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 677.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 1 MTMNHRKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 81 RNMHANGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNT 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 161 LVQWIWGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 241 LTLTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 5835747 321 LTQTLFWSFIANLLVLTWIGGQPVENPFITIGQVASILYFSTLLILIPIAGVIENKML 378
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLL 378
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
6-369 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 639.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 6 RKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHA 85
Cdd:MTH00191 2 RKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 86 NGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWI 165
Cdd:MTH00191 82 NGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 166 WGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLLLTLTL 245
Cdd:MTH00191 162 WGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 246 FSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRPLTQTL 325
Cdd:MTH00191 242 FSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVV 321
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 5835747 326 FWSFIANLLVLTWIGGQPVENPFITIGQVASILYFSTLLILIPI 369
Cdd:MTH00191 322 FWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
13-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 611.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 13 KIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFF 92
Cdd:MTH00156 2 KIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 93 MCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWIWGGFSVD 172
Cdd:MTH00156 82 ICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 173 NATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLLLTLTLFSPNLLG 252
Cdd:MTH00156 162 NATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 253 DPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRPLTQTLFWSFIAN 332
Cdd:MTH00156 242 DPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNI 321
|
330 340 350
....*....|....*....|....*....|....
gi 5835747 333 LLVLTWIGGQPVENPFITIGQVASILYFSTLLIL 366
Cdd:MTH00156 322 VILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 599.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 1 MTMNHRKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 81 RNMHANGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNT 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 161 LVQWIWGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 241 LTLTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 5835747 321 LTQTLFWSFIANLLVLTWIGGQPVENPFITIGQVASILYFStLLILIPIAGVIENKML 378
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFL-FFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
6-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 596.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 6 RKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHA 85
Cdd:MTH00034 5 RKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 86 NGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWI 165
Cdd:MTH00034 85 NGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 166 WGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLLLTLTL 245
Cdd:MTH00034 165 WGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLAL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 246 FSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRPLTQTL 325
Cdd:MTH00034 245 LFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIA 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 5835747 326 FWSFIANLLVLTWIGGQPVENPFITIGQVASILYFSTLLILIPIAGVIENKML 378
Cdd:MTH00034 325 FWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 569.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 1 MTMNHRKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 81 RNMHANGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNT 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 161 LVQWIWGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 241 LTLTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 5835747 321 LTQTLFWSFIANLLVLTWIGGQPVENPFITIGQVASILYFStLLILIPIAGVIENKML 378
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFF-YFMINPLLMKLWDKLL 377
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
3-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 525.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 3 MNHRKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRN 82
Cdd:MTH00022 1 MPLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 83 MHANGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLV 162
Cdd:MTH00022 81 LHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 163 QWIWGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLLLT 242
Cdd:MTH00022 161 QWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 243 LTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRPLT 322
Cdd:MTH00022 241 IVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLG 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 5835747 323 QTLFWSFIANLLVLTWIGGQPVENPFITIGQVASILYFSTLLILIPIAGVIENKML 378
Cdd:MTH00022 321 RMAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLL 376
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 521.96 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 1 MTMNHRKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 81 RNMHANGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNT 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 161 LVQWIWGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 241 LTLTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 5835747 321 LTQTLFWSFIANLLVLTWIGGQPVENPFITIGQVASILYFSTLLILIPIAGVIENKML 378
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLL 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
6-365 |
6.09e-180 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 504.46 E-value: 6.09e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 6 RKTHPLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHA 85
Cdd:MTH00224 6 RTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 86 NGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWI 165
Cdd:MTH00224 86 NGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 166 WGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLLLTLTL 245
Cdd:MTH00224 166 WGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 246 FSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRPLTQTL 325
Cdd:MTH00224 246 FEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLL 325
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 5835747 326 FWSFIANLLVLTWIGGQPVENPFITIGQVASILYFSTLLI 365
Cdd:MTH00224 326 FWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFII 365
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
3-375 |
4.83e-135 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 390.84 E-value: 4.83e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 3 MNHRKTHPLTKIinNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRN 82
Cdd:MTH00033 1 MRLRKTGLLEPV--NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 83 MHANGASLFFMCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLV 162
Cdd:MTH00033 79 VHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIV 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 163 QWIWGGFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLG--VILMLTLL 240
Cdd:MTH00033 159 EWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGflILFGVFVI 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 241 LTLTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRP 320
Cdd:MTH00033 239 IGIEPRIETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNP 318
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 5835747 321 LTQTLFWSFIANLLVLTWIGGQPV-ENPFITIGQVASILYFSTLLILIPIAGVIEN 375
Cdd:MTH00033 319 TGKFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-374 |
4.89e-132 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 383.37 E-value: 4.89e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 10 PLTKIINNsFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGAS 89
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 90 LFFMCIYLHIGRGLYYGSylYKE----TWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWI 165
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 166 WGGFSVDNATLTRFFTLH-FLLPFTIMGLTMVHLLFLHETGSNNPTG----LNSNTDKIPFHPYFSYKDLLGVILMLTLL 240
Cdd:COG1290 176 FGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVF 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 241 LTLTLFSPNllGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLLSILVLFLMPALHTSKQRTTQF 318
Cdd:COG1290 256 ALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRY 333
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 5835747 319 RPLTQTLFWSFIANLLVLTWIGGQPVenPFITIGQVASILYFSTLLILIPIAGVIE 374
Cdd:COG1290 334 RPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-366 |
4.77e-123 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 359.25 E-value: 4.77e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 13 KIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 93 MCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWIWGGFSVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 173 NATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVIlMLTLLLTLTLFSPNLLG 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 253 DPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSkqrTTQFRPLTQTLFWSFIAN 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|....
gi 5835747 333 LLVLTWIGGQPVENPFITIGQVASILYFSTLLIL 366
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
5.20e-99 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 292.35 E-value: 5.20e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 10 PLTKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 90 LFFMCIYLHIGRGLYYGSY--LYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 5835747 168 GFSVDNATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
13-365 |
3.60e-91 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 278.02 E-value: 3.60e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 13 KIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFF 92
Cdd:MTH00046 3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 93 MCIYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWIWGGFSVD 172
Cdd:MTH00046 83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 173 NATLTRFFTLHFLLPFTIMGLTMVHLLFLHETGSNNPTGL-NSNTDKIPFHPYFSYKDLLGVILMLTLLLTLTLFSPNLL 251
Cdd:MTH00046 163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 252 GDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVlALLLSILVLFLMPALHTSkqrtTQFRPLTQTLFWSFIA 331
Cdd:MTH00046 243 LDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGL-VLVLSFLFFLWVPTFNGS----SVYSVWRQVNFWLIVS 317
|
330 340 350
....*....|....*....|....*....|....
gi 5835747 332 NLLVLTWIGGQPVENPFITIGQVASILYFSTLLI 365
Cdd:MTH00046 318 LFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
2.79e-89 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 266.94 E-value: 2.79e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 19 FIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 99 IGRGLYYG--SYLYKETWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWIWGGFSVDNATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 5835747 177 TRFFTLHFLLPFTIMGLTMVHLLFLHETG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-355 |
4.69e-50 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 165.13 E-value: 4.69e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 208 NPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLLLTLTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 5835747 288 KLGGVLALLLSILVLFLMPALHTSKQRtTQFRPLTQTLFWSFIANLLVLTWIGGQPVENPFITIGQVA 355
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKR-SQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
6.49e-49 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 162.80 E-value: 6.49e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 89 SLFFMCIYLHIGRGLYYGSYLYKE--TWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWIW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 167 GGFSVDNATLTRFFTLHF-LLPFTIMGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGVILMLTLLLTLTL 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 5835747 246 FSPNLLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
34-209 |
1.01e-40 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 143.31 E-value: 1.01e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 34 FGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGLYYGSYLYKE- 112
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 113 -TWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWIWGGFSVDNATLTRFFTLH-FLLPFTI 190
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170
....*....|....*....
gi 5835747 191 MGLTMVHLLFLHETGSNNP 209
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
1.89e-39 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 135.68 E-value: 1.89e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 259 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRPLTQTLFWSFIANLLVLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 5835747 339 IGGQPVENPFITIGQVASILY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-209 |
2.18e-36 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 131.77 E-value: 2.18e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 25 PSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGLY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 105 YGSYLYKE--TWNTGIILLLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPFIGNTLVQWIWGGFSVDNATLTRFFTL 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 5835747 183 H-FLLPFTIMGLTMVHLLFLHETGSNNP 209
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
259-340 |
1.99e-08 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 53.26 E-value: 1.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 259 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQF-RPLTQTLfwsFIANLLVLT 337
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPVATAV---FLFGTLVTL 142
|
...
gi 5835747 338 WIG 340
Cdd:COG5679 143 WLG 145
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
259-340 |
6.79e-08 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 51.54 E-value: 6.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 259 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQF-RPLTQTLfwsFIANLLVLT 337
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFrRPVATTV---FLIGTAVAL 141
|
...
gi 5835747 338 WIG 340
Cdd:CHL00058 142 WLG 144
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-340 |
7.48e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 51.34 E-value: 7.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835747 259 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQF-RPLTQTLfwsFIANLLVLT 337
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTV---FLFGTVVAL 141
|
...
gi 5835747 338 WIG 340
Cdd:TIGR01156 142 WLG 144
|
|
|