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Conserved domains on  [gi|6319443|ref|NP_009525|]
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uncharacterized protein YBL028C [Saccharomyces cerevisiae S288C]

Protein Classification

DUF2423 domain-containing protein( domain architecture ID 10563471)

DUF2423 domain-containing protein similar to the Saccharomyces cerevisiae ribosomal biogenesis factor YBL028C

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2423 pfam10338
Protein of unknown function (DUF2423); This is a family of proteins conserved in fungi. The ...
 1-44 6.90e-12

Protein of unknown function (DUF2423); This is a family of proteins conserved in fungi. The function is not known.


:

Pssm-ID: 431219  Cd Length: 44  Bit Score: 55.27  E-value: 6.90e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 6319443      1 MAKSLRASSHLNAKSVKRRGVFQKAVDAREQRISDKLKEDLLKQ 44
Cdd:pfam10338   1 MAKSLRSKSKKRNRSVKRKSVFGPVEDARLERLSAKLKELAKKP 44
 
Name Accession Description Interval E-value
DUF2423 pfam10338
Protein of unknown function (DUF2423); This is a family of proteins conserved in fungi. The ...
 1-44 6.90e-12

Protein of unknown function (DUF2423); This is a family of proteins conserved in fungi. The function is not known.


Pssm-ID: 431219  Cd Length: 44  Bit Score: 55.27  E-value: 6.90e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 6319443      1 MAKSLRASSHLNAKSVKRRGVFQKAVDAREQRISDKLKEDLLKQ 44
Cdd:pfam10338   1 MAKSLRSKSKKRNRSVKRKSVFGPVEDARLERLSAKLKELAKKP 44
 
Name Accession Description Interval E-value
DUF2423 pfam10338
Protein of unknown function (DUF2423); This is a family of proteins conserved in fungi. The ...
 1-44 6.90e-12

Protein of unknown function (DUF2423); This is a family of proteins conserved in fungi. The function is not known.


Pssm-ID: 431219  Cd Length: 44  Bit Score: 55.27  E-value: 6.90e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 6319443      1 MAKSLRASSHLNAKSVKRRGVFQKAVDAREQRISDKLKEDLLKQ 44
Cdd:pfam10338   1 MAKSLRSKSKKRNRSVKRKSVFGPVEDARLERLSAKLKELAKKP 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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