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Conserved domains on  [gi|398365249|ref|NP_010331|]
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amino acid transporter BAP3 [Saccharomyces cerevisiae S288C]

Protein Classification

amino acid permease( domain architecture ID 11489958)

amino acid permease belonging to the APC (amino acid/polyamine/organocation) family, is an integral membrane protein that facilitates the transport of amino acids

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
87-568 0e+00

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


:

Pssm-ID: 273334  Cd Length: 478  Bit Score: 673.23  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249   87 KKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGSLVIGYVMVSFVTYFMVQAAGEMGVTYPTLPGNFNAYNSIFISK 166
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  167 SFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFII 246
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  247 LSVVINCGGAGVDGYIGGKYWRDPGSFAEGSGATRFKGICYILVSAYFSFGGIELFVLSINEQSNPRKSTPVAAKRSVYR 326
Cdd:TIGR00913 161 LSIILNCGGGPNHGYIGFRYWHDPGAFAGGTIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWR 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  327 ILIIYLLTMILIGFNVPHNNDQLM-GSGGSATHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRLMCSLA 405
Cdd:TIGR00913 241 ILVFYILTLFLIGFLVPYNDPRLLsSSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  406 QQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMKVQGRSL 485
Cdd:TIGR00913 321 HQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRSL 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  486 DEVGYKANTGIWGSYYGVFFNMLVFMAQFWVALSPIgnggKCDAQAFFESYLAAPLWIFMYVGYMVYKRDfTFLNPLDKI 565
Cdd:TIGR00913 401 DELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPV----KFSAKSFFEAYLSLPIFIALYIGHKVYKRD-KLIIKLDDI 475

                  ...
gi 398365249  566 DLD 568
Cdd:TIGR00913 476 DLD 478
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
87-568 0e+00

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 673.23  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249   87 KKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGSLVIGYVMVSFVTYFMVQAAGEMGVTYPTLPGNFNAYNSIFISK 166
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  167 SFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFII 246
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  247 LSVVINCGGAGVDGYIGGKYWRDPGSFAEGSGATRFKGICYILVSAYFSFGGIELFVLSINEQSNPRKSTPVAAKRSVYR 326
Cdd:TIGR00913 161 LSIILNCGGGPNHGYIGFRYWHDPGAFAGGTIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWR 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  327 ILIIYLLTMILIGFNVPHNNDQLM-GSGGSATHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRLMCSLA 405
Cdd:TIGR00913 241 ILVFYILTLFLIGFLVPYNDPRLLsSSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  406 QQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMKVQGRSL 485
Cdd:TIGR00913 321 HQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRSL 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  486 DEVGYKANTGIWGSYYGVFFNMLVFMAQFWVALSPIgnggKCDAQAFFESYLAAPLWIFMYVGYMVYKRDfTFLNPLDKI 565
Cdd:TIGR00913 401 DELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPV----KFSAKSFFEAYLSLPIFIALYIGHKVYKRD-KLIIKLDDI 475

                  ...
gi 398365249  566 DLD 568
Cdd:TIGR00913 476 DLD 478
AA_permease pfam00324
Amino acid permease;
94-556 5.26e-138

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 409.79  E-value: 5.26e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249   94 HVVMMSLGTGIGTGLLVANAKGLSLAGPGSLVIGYVMVSFVTYFMVQAAGEMGVTYPtLPGNFNAYNSIFISKSFGFATT 173
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGP-VSGGFYTYASRFLGPSLGFATG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  174 WLFCIQWLTVLPLELITSSMTVKYWN---DTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFIILSVV 250
Cdd:pfam00324  80 WNYWLSWITVLALELTAASILIQFWElvpDIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGII 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  251 INCGGAGVDGYIGgKYWRDPGsFAEGSGATRFKGICYILVSAYFSFGGIELFVLSINEQSNPRKSTPVAAKRSVYRILII 330
Cdd:pfam00324 160 LLSGGNPNDGAIF-RYLGDNG-GKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIF 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  331 YLLTMILIGFNVPHNNDQLMGSGGSAthASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRLMCSLAQQGYA 410
Cdd:pfam00324 238 YILSLLAIGLLVPWNDPGLLNDSASA--ASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLA 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  411 PKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMKVQGRSLDEVGY 490
Cdd:pfam00324 316 PKFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPF 395
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 398365249  491 KANTGIWGSYYGVFFNMLVFMAQFWVALSPIGNGGKC-DAQAFFESYLAAPLWIFMYVGYMVYKRDF 556
Cdd:pfam00324 396 KAPLGPLGVILGLAAIIIILIIQFLYAFLPVPGGPKNwGAGSFAAAYLIVLLFLIILIGVKLHVKNW 462
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
77-568 2.97e-102

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 317.88  E-value: 2.97e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  77 TKSMKSNNHLKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGSLVIGYVMVSFVTYFMVQAAGEMGVTYPTlPGNF 156
Cdd:COG0833    1 SSGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPV-SGSF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 157 NAYNSIFISKSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSC 236
Cdd:COG0833   80 QTYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 237 KILMVAGFIILsvvincGGAGVDGYIGGK------YWRDPGSFAEGsgatrFKGICYILVSAYFSFGGIELFVLSINEQS 310
Cdd:COG0833  160 KVITVIAFIIV------GLLMIFGIIGGHapgfsnFTTGDGPFPGG-----FLAILGVMMIVGFSFQGTELIGIAAGESE 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 311 NPRKSTPVAAKRSVYRILIIYLLTMILIGFNVPHNNDQLMgsggsathASPYVLAASIHKVRVIPHIINAVILISVISVA 390
Cdd:COG0833  229 NPEKTIPKAIRQVFWRILLFYILAIFVIAALIPYTDAGVA--------ESPFTLVFERAGIPYAADIMNAVILTAVLSAG 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 391 NSALYAAPRLMCSLAQQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLS 470
Cdd:COG0833  301 NSGLYASTRMLWSLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAIS 380
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 471 HIRFRKAMKVQGRSLDEVGYKANTGIWGSYYGVFFNMLVFMAQFWvalspignggkcDAQAFFESYLAAPLWIFMYVGYM 550
Cdd:COG0833  381 HYRFRRAYVAQGGDLEDLKYKAPLFPFGPIFAFILCLIVIIGQAF------------DPEQRIALYIGIPFFLACYLGYK 448
                        490
                 ....*....|....*...
gi 398365249 551 VYKRdfTFLNPLDKIDLD 568
Cdd:COG0833  449 LKKK--TKLVPLEEMDLS 464
PRK10836 PRK10836
lysine transporter; Provisional
86-553 2.77e-64

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 218.92  E-value: 2.77e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  86 LKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGSLVIGYVMVSFVTYFMVQAAGEMGVTYPtLPGNFNAYNSIFIS 165
Cdd:PRK10836  13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMP-VSGSFATYGQNYVE 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 166 KSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFI 245
Cdd:PRK10836  92 EGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFI 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 246 ILSVVINCG---GAGVDGYIGGKYWRDP--GSFAEGSGATRFKGicyilvsayFSFGGIELFVLSINEQSNPRKSTPVAA 320
Cdd:PRK10836 172 IVGVLMIIGifkGAEPAGWSNWTIGDAPfaGGFAAMIGVAMIVG---------FSFQGTELIGIAAGESEDPAKNIPRAV 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 321 KRSVYRILIIYLLTMILIGFNVPHNNDQLMGSGGSATHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRL 400
Cdd:PRK10836 243 RQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRM 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 401 MCSLAQQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMKV 480
Cdd:PRK10836 323 LYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVL 402
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 398365249 481 QGRSLDEVGYKANTGIWGSYYGVFFNMLVFMAQFWVALSpignGGKCDAQAFFESYLAAPLWIFMYVGYMVYK 553
Cdd:PRK10836 403 QGHDLNDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAFL----KDTIDWGGVAATYIGIPLFLIIWFGYKLIK 471
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
87-568 0e+00

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 673.23  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249   87 KKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGSLVIGYVMVSFVTYFMVQAAGEMGVTYPTLPGNFNAYNSIFISK 166
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  167 SFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFII 246
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  247 LSVVINCGGAGVDGYIGGKYWRDPGSFAEGSGATRFKGICYILVSAYFSFGGIELFVLSINEQSNPRKSTPVAAKRSVYR 326
Cdd:TIGR00913 161 LSIILNCGGGPNHGYIGFRYWHDPGAFAGGTIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWR 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  327 ILIIYLLTMILIGFNVPHNNDQLM-GSGGSATHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRLMCSLA 405
Cdd:TIGR00913 241 ILVFYILTLFLIGFLVPYNDPRLLsSSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  406 QQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMKVQGRSL 485
Cdd:TIGR00913 321 HQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRSL 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  486 DEVGYKANTGIWGSYYGVFFNMLVFMAQFWVALSPIgnggKCDAQAFFESYLAAPLWIFMYVGYMVYKRDfTFLNPLDKI 565
Cdd:TIGR00913 401 DELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPV----KFSAKSFFEAYLSLPIFIALYIGHKVYKRD-KLIIKLDDI 475

                  ...
gi 398365249  566 DLD 568
Cdd:TIGR00913 476 DLD 478
AA_permease pfam00324
Amino acid permease;
94-556 5.26e-138

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 409.79  E-value: 5.26e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249   94 HVVMMSLGTGIGTGLLVANAKGLSLAGPGSLVIGYVMVSFVTYFMVQAAGEMGVTYPtLPGNFNAYNSIFISKSFGFATT 173
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGP-VSGGFYTYASRFLGPSLGFATG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  174 WLFCIQWLTVLPLELITSSMTVKYWN---DTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFIILSVV 250
Cdd:pfam00324  80 WNYWLSWITVLALELTAASILIQFWElvpDIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGII 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  251 INCGGAGVDGYIGgKYWRDPGsFAEGSGATRFKGICYILVSAYFSFGGIELFVLSINEQSNPRKSTPVAAKRSVYRILII 330
Cdd:pfam00324 160 LLSGGNPNDGAIF-RYLGDNG-GKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIF 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  331 YLLTMILIGFNVPHNNDQLMGSGGSAthASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRLMCSLAQQGYA 410
Cdd:pfam00324 238 YILSLLAIGLLVPWNDPGLLNDSASA--ASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLA 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  411 PKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMKVQGRSLDEVGY 490
Cdd:pfam00324 316 PKFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPF 395
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 398365249  491 KANTGIWGSYYGVFFNMLVFMAQFWVALSPIGNGGKC-DAQAFFESYLAAPLWIFMYVGYMVYKRDF 556
Cdd:pfam00324 396 KAPLGPLGVILGLAAIIIILIIQFLYAFLPVPGGPKNwGAGSFAAAYLIVLLFLIILIGVKLHVKNW 462
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
77-568 2.97e-102

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 317.88  E-value: 2.97e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  77 TKSMKSNNHLKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGSLVIGYVMVSFVTYFMVQAAGEMGVTYPTlPGNF 156
Cdd:COG0833    1 SSGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPV-SGSF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 157 NAYNSIFISKSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSC 236
Cdd:COG0833   80 QTYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 237 KILMVAGFIILsvvincGGAGVDGYIGGK------YWRDPGSFAEGsgatrFKGICYILVSAYFSFGGIELFVLSINEQS 310
Cdd:COG0833  160 KVITVIAFIIV------GLLMIFGIIGGHapgfsnFTTGDGPFPGG-----FLAILGVMMIVGFSFQGTELIGIAAGESE 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 311 NPRKSTPVAAKRSVYRILIIYLLTMILIGFNVPHNNDQLMgsggsathASPYVLAASIHKVRVIPHIINAVILISVISVA 390
Cdd:COG0833  229 NPEKTIPKAIRQVFWRILLFYILAIFVIAALIPYTDAGVA--------ESPFTLVFERAGIPYAADIMNAVILTAVLSAG 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 391 NSALYAAPRLMCSLAQQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLS 470
Cdd:COG0833  301 NSGLYASTRMLWSLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAIS 380
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 471 HIRFRKAMKVQGRSLDEVGYKANTGIWGSYYGVFFNMLVFMAQFWvalspignggkcDAQAFFESYLAAPLWIFMYVGYM 550
Cdd:COG0833  381 HYRFRRAYVAQGGDLEDLKYKAPLFPFGPIFAFILCLIVIIGQAF------------DPEQRIALYIGIPFFLACYLGYK 448
                        490
                 ....*....|....*...
gi 398365249 551 VYKRdfTFLNPLDKIDLD 568
Cdd:COG0833  449 LKKK--TKLVPLEEMDLS 464
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
81-554 9.45e-88

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 280.08  E-value: 9.45e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  81 KSNNHLKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPgSLVIGYVMVSFVTYFMVQAAGEMGVTYPTlPGNFNAYN 160
Cdd:COG1113    8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGP-AVLLSYLIAGLIVFLVMRALGEMAVANPV-SGSFSDYA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 161 SIFISKSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILM 240
Cdd:COG1113   86 REYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVA 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 241 VAGFIILSVVINCGGAGVDGYIG---GKYWRDPGSFAEGsgatrFKGICYILVSAYFSFGGIELFVLSINEQSNPRKSTP 317
Cdd:COG1113  166 IVAFIVVGLLLIFFGFGLPGGPPaglSNLWDHGGFFPNG-----IGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIP 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 318 VAAKRSVYRILIIYLLTMILIGFNVPHNNdqlmgsggSATHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAA 397
Cdd:COG1113  241 KAINSVIWRILLFYVGSLFVILALVPWNQ--------IGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYST 312
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 398 PRLMCSLAQQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFV--ACSPqeEQAFTWLAAIAGLSELFTWSGIMLSHIRFR 475
Cdd:COG1113  313 SRMLYSLAERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVlnYLLP--EKAFTFLLSISGFGALFVWLMILVSQLKFR 390
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 476 KAMKVQGrsLDEVGYKANTGIWGSYYGvffnmLVFMAQFWVALspignggkcdaqAFFESY----LAAPLW-IFMYVGYM 550
Cdd:COG1113  391 RRLPREG--AAALKFKMPGFPYTSYLT-----LAFLAAVLVLM------------AFDPDTrialIVGPVWlALLVVGYF 451

                 ....
gi 398365249 551 VYKR 554
Cdd:COG1113  452 LVRR 455
PRK10836 PRK10836
lysine transporter; Provisional
86-553 2.77e-64

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 218.92  E-value: 2.77e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  86 LKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGSLVIGYVMVSFVTYFMVQAAGEMGVTYPtLPGNFNAYNSIFIS 165
Cdd:PRK10836  13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMP-VSGSFATYGQNYVE 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 166 KSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFI 245
Cdd:PRK10836  92 EGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFI 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 246 ILSVVINCG---GAGVDGYIGGKYWRDP--GSFAEGSGATRFKGicyilvsayFSFGGIELFVLSINEQSNPRKSTPVAA 320
Cdd:PRK10836 172 IVGVLMIIGifkGAEPAGWSNWTIGDAPfaGGFAAMIGVAMIVG---------FSFQGTELIGIAAGESEDPAKNIPRAV 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 321 KRSVYRILIIYLLTMILIGFNVPHNNDQLMGSGGSATHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRL 400
Cdd:PRK10836 243 RQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRM 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 401 MCSLAQQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMKV 480
Cdd:PRK10836 323 LYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVL 402
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 398365249 481 QGRSLDEVGYKANTGIWGSYYGVFFNMLVFMAQFWVALSpignGGKCDAQAFFESYLAAPLWIFMYVGYMVYK 553
Cdd:PRK10836 403 QGHDLNDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAFL----KDTIDWGGVAATYIGIPLFLIIWFGYKLIK 471
PRK10249 PRK10249
phenylalanine transporter; Provisional
86-554 1.48e-54

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 192.12  E-value: 1.48e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  86 LKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGSLvIGYVMVSFVTYFMVQAAGEMGVTYPtLPGNFNAYNSIFIS 165
Cdd:PRK10249  19 LHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVL-LGYGVAGIIAFLIMRQLGEMVVEEP-VSGSFAHFAYKYWG 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 166 KSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFI 245
Cdd:PRK10249  97 PFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMI 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 246 ILSVVINCGGAGVDGYIGGKYWRDPGSFAEGsgatrFKGICYILVSAYFSFGGIELFVLSINEQSNPRKSTPVAAKRSVY 325
Cdd:PRK10249 177 GFGLWLLFSGHGGEKASIDNLWRYGGFFATG-----WNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVY 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 326 RILIIYLLTMILIGFNVPHNNDQlmgsggsaTHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRLMCSLA 405
Cdd:PRK10249 252 RILLFYIGSLVVLLALYPWVEVK--------SNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLS 323
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 406 QQGYAPKFLNYIDREGRPLRALV----VCSLVGVVGFVAcsPQEeqAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMKVQ 481
Cdd:PRK10249 324 VQGNAPKFLTRVSRRGVPINSLMlsgaITSLVVLINYLL--PQK--AFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQ 399
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 398365249 482 GRsldEVGYKANTGIWGSYYGVFFNMLVFMAQfwvalspignggkCDAQAFFESYLAAPLWI-FMYVGYMVYKR 554
Cdd:PRK10249 400 GR---ETQFKALLYPFGNYLCIAFLGMILLLM-------------CTMDDMRLSAILLPVWIvFLFVAFKTLRR 457
PRK11387 PRK11387
S-methylmethionine permease;
79-492 3.30e-53

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 188.91  E-value: 3.30e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  79 SMKSNNHLKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGSLVIGYVMVSFVTYFMVQAAGEMGVTYPTlPGNFNA 158
Cdd:PRK11387   5 TSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPE-TGAFHV 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 159 YNSIFISKSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKI 238
Cdd:PRK11387  84 YAARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKV 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 239 LMVAGFIILsvvincGGAGVDGYIGGKywrdPGSFAEGSGATRFKG--------ICYILVSAYFSFGGIELFVLSINEQS 310
Cdd:PRK11387 164 VTILAFIVL------GGAAIFGFIPMQ----DGSPAPGLRNLTAEGwfphgglpILMTMVAVNFAFSGTELIGIAAGETE 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 311 NPRKSTPVAAKRSVYRILIIYLLTMILIGFNVPhnndqlMGSGGSAThaSPYVLAASIHKVRVIPHIINAVILISVISVA 390
Cdd:PRK11387 234 NPAKVIPVAIRTTIARLVIFFVGTVLVLAALIP------MQQAGVEK--SPFVLVFEKVGIPYAADIFNFVILTAILSAA 305
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 391 NSALYAAPRLMCSLAQQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLS 470
Cdd:PRK11387 306 NSGLYASGRMLWSLSNEGTLPACFARLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAVWLSICAS 385
                        410       420
                 ....*....|....*....|..
gi 398365249 471 HIRFRKAMKVQGRSLDEVGYKA 492
Cdd:PRK11387 386 HFMFRRRHLRDGKALSELAYRA 407
PRK10238 PRK10238
aromatic amino acid transporter AroP;
80-482 3.52e-53

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 188.24  E-value: 3.52e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  80 MKSNNH---LKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGsLVIGYVMVSFVTYFMVQAAGEMGVTYPtLPGNF 156
Cdd:PRK10238   1 MEGQQHgeqLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPG-IILGYAIAGFIAFLIMRQLGEMVVEEP-VAGSF 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 157 NAYNSIFISKSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSC 236
Cdd:PRK10238  79 SHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAII 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 237 KILMVAGFIILSVVINCGGAGVDGYIGGKYWRDPGSFAEGsgatrFKGICYILVSAYFSFGGIELFVLSINEQSNPRKST 316
Cdd:PRK10238 159 KVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHG-----FTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSI 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 317 PVAAKRSVYRILIIYLLTMILIGFNVPHNNdqlmgsggSATHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYA 396
Cdd:PRK10238 234 PKATNQVIYRILIFYIGSLAVLLSLMPWTR--------VTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYC 305
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 397 APRLMCSLAQQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRK 476
Cdd:PRK10238 306 NSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRR 385

                 ....*.
gi 398365249 477 AMKVQG 482
Cdd:PRK10238 386 AKQEQG 391
proY PRK10580
putative proline-specific permease; Provisional
80-511 1.67e-39

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 150.74  E-value: 1.67e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  80 MKSNNHLKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPgSLVIGYVMVSFVTYFMVQAAGEMGVTYPTlPGNFNAY 159
Cdd:PRK10580   1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGVAAYIIMRALGEMSVHNPA-ASSFSRY 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 160 NSIFISKSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKIL 239
Cdd:PRK10580  79 AQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 240 MVAGFIILSVVINCGGAGVDGYIGG--KYWRDPGSFAEGsgatrFKGICYILVSAYFSFGGIELFVLSINEQSNPRKSTP 317
Cdd:PRK10580 159 TIIIMIVAGIGIIIWGIGNGGQPTGihNLWSNGGFFSNG-----WLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIP 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 318 VAAKRSVYRILIIYLLTMILIGFNVPHNNdqlmgsggSATHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAA 397
Cdd:PRK10580 234 RAINSVPMRILVFYVGTLFVIMSIYPWNQ--------VGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGV 305
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 398 PRLMCSLAQQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRKA 477
Cdd:PRK10580 306 GRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRR 385
                        410       420       430
                 ....*....|....*....|....*....|....*
gi 398365249 478 M-KVQGRSLDevgYKANTGIWGSYYGVFFnmLVFM 511
Cdd:PRK10580 386 LpPEEVKALK---FKVPGGVATTIGGLIF--LVFI 415
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
82-476 4.89e-34

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 135.25  E-value: 4.89e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  82 SNNHLKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPgSLVIGYVMVSFVTYFMVQAAGEMgvtyptLPGNFNaYNS 161
Cdd:PRK11049  14 AEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGP-SIIFVYMIIGFMLFFVMRAMGEL------LLSNLE-YKS 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 162 iFISKS-------FGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFN 234
Cdd:PRK11049  86 -FSDFAsdllgpwAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 235 SCKILMVAGFIILSVVINCGG----AGVDGYIgGKYWRDPGSFAEGSGATrFKGicyiLVSAYFSFGGIELFVLSINEQS 310
Cdd:PRK11049 165 MIKIVAIVALIVVGLVMVAMHfqspTGVEASF-AHLWNDGGMFPKGLSGF-FAG----FQIAVFAFVGIELVGTTAAETK 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 311 NPRKSTPVAAKRSVYRILIIYLLTMILIGFNVPHNNdqlmgsggSATHASPYVLAASIHKVRVIPHIINAVILISVISVA 390
Cdd:PRK11049 239 DPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSS--------VVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSA 310
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 391 NSALYAAPRLMCSLAQQGYAPKFLNYIDREGRPLRALV---VCSLVGVVgFVACSPQEEQAFTWLAAIAGLSELFTWSGI 467
Cdd:PRK11049 311 NSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTfscICLLGGVV-LLYVNPSVIGAFTLVTTVSAILFMFVWTII 389

                 ....*....
gi 398365249 468 MLSHIRFRK 476
Cdd:PRK11049 390 LCSYLVYRK 398
PRK15049 PRK15049
L-asparagine permease;
88-512 7.11e-34

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 135.13  E-value: 7.11e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  88 KSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPgSLVIGYVMVSFVTYFMVQAAGEMGVTYPTlPGNFNAYNSIFISKS 167
Cdd:PRK15049  28 KAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGP-ALALVYLICGLFSFFILRALGELVLHRPS-SGSFVSYAREFLGEK 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 168 FGFATTWLFCIQWLTVLPLELITSSMTVKYWN--DTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFI 245
Cdd:PRK15049 106 AAYVAGWMYFINWAMTGIVDITAVALYMHYWGafGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFL 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 246 ILSVVINCGGAGVDGYIGGKYW-RDPGSFAEgsgatrfKGICYILV---SAYFSFGGIELFVLSINEQSNPRKSTPVAAK 321
Cdd:PRK15049 186 VVGTVFLGSGQPLDGNTTGFHLiTDNGGFFP-------HGLLPALVliqGVVFAFASIEMVGTAAGECKDPQTMVPKAIN 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 322 RSVYRILIIYLLTMILIGFNVPHNNDQlmgsggsaTHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRLM 401
Cdd:PRK15049 259 SVIWRIGLFYVGSVVLLVMLLPWSAYQ--------AGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRIL 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 402 CSLAQQGYAPKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMKvQ 481
Cdd:PRK15049 331 RSMAMGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIK-E 409
                        410       420       430
                 ....*....|....*....|....*....|...
gi 398365249 482 GRSLDeVGYKANTGIWGSYYGVFF--NMLVFMA 512
Cdd:PRK15049 410 GKAAD-VSFKLPGAPFTSWLTLLFllSVLVLMA 441
PRK10746 PRK10746
putative transport protein YifK; Provisional
86-479 2.03e-31

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 127.63  E-value: 2.03e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  86 LKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPgSLVIGYVMVSFVTYFMVQAAGEMGVTYPtLPGNFNAYNSIFIS 165
Cdd:PRK10746   8 LQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGP-SVLLAYIIAGLFVFFIMRSMGEMLFLEP-VTGSFAVYAHRYMS 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 166 KSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFI 245
Cdd:PRK10746  86 PFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMI 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 246 ILSVVINCGGAGVDGY-IGGKYWRDPGSFAEGSgatrFKGICYILVSAYFSFGGIELFVLSINEQSNPRKSTPVAAKRSV 324
Cdd:PRK10746 166 VIGLGVIFFGFGNGGQsIGFSNLTEHGGFFAGG----WKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVL 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 325 YRILIIYLLTMILIGFNVPHNndqlmgsgGSATHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRLMCSL 404
Cdd:PRK10746 242 WRILIFYVGAIFVIVTIFPWN--------EIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYAL 313
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 398365249 405 AQQGYAPKFLNYIDREGRPLRALVVCSLVGVVG--FVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMK 479
Cdd:PRK10746 314 AKNRQLPAAMAKVSRHGVPVAGVAVSILILLVGscLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHK 390
PRK10197 PRK10197
GABA permease;
97-482 2.78e-31

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 126.66  E-value: 2.78e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  97 MMSLGTGIGTGLLVANAKGLSLAGPgSLVIGYVMVSFVTYFMVQAAGEMGVTYPTlPGNFNAYNSIFISKSFGFATTWLF 176
Cdd:PRK10197   1 MLSIAGVIGASLFVGSSVAIAEAGP-AVLLAYLFAGLLVVMIMRMLAEMAVATPD-TGSFSTYADKAIGRWAGYTIGWLY 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 177 CIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFIILSVVINCG-- 254
Cdd:PRK10197  79 WWFWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGfy 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 255 -GAGVDGYigGKYWRDPGSFAEGSGAtrfkgICYILVSAYFSFGGIELFVLSINEQSNPRKSTPVAAKRSVYRILIIYLL 333
Cdd:PRK10197 159 pYAEVSGI--SRLWDSGGFMPNGFGA-----VLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLC 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 334 TMILIGFNVPHNNDQLMGSGGSathaspyvlaASIHKVRVIPH---IINAVILISVISVANSALYAAPRLMCSLAQQGYA 410
Cdd:PRK10197 232 SIFVVVALIPWNMPGLKAVGSY----------RSVLELLNIPHaklIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDA 301
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 398365249 411 PKFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMKVQG 482
Cdd:PRK10197 302 PAVMGKINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEG 373
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
82-476 2.90e-31

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 126.55  E-value: 2.90e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  82 SNNHLKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAGPGSLvIGYVMVSFVTYFMVQAAGEMGVTYPTlPGNFNAYNS 161
Cdd:COG0531    5 ESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAI-LAWLIAGLLALLVALSYAELASAFPR-AGGAYTYAR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 162 IFISKSFGFATTWLFCIQWLTVLPLELITSSMTVKYWNDTINADVFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMV 241
Cdd:COG0531   83 RALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVL 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 242 AGFIILSVVincggagvdgyiggkyWRDPGSFAE-GSGATRFKGICYILVSAYFSFGGIELFVLSINEQSNPRKSTPVAA 320
Cdd:COG0531  163 LLFIVVGLF----------------AFDPANFTPfLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAI 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249 321 KRSVYRILIIYLLTMILIGFNVPhnNDQLMGSGGsathasPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRL 400
Cdd:COG0531  227 ILSLLIVGVLYILVSLALTGVVP--YDELAASGA------PLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRL 298
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 398365249 401 MCSLAQQGYAPKFLNYI-DREGRPLRALVVCSLVGVVGFVACSpqeeQAFTWLAAIAGLSELFTWSGIMLSHIRFRK 476
Cdd:COG0531  299 LYAMARDGLLPKVFAKVhPRFGTPVNAILLTGVIALLLLLLGA----ASFTALASLASVGVLLAYLLVALAVIVLRR 371
AA_permease_2 pfam13520
Amino acid permease;
95-484 5.80e-21

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 95.84  E-value: 5.80e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249   95 VVMMSLGTGIGTGLLVANakglSLAGPGSLVIGYVMVSFVTYFMVQAA--GEMGVTYPTLPGNFNaYNSIFISKSFGFAT 172
Cdd:pfam13520   6 AFALVIGSVIGSGIFVAP----LVASGGPALIVWGWIAAIIFSLAVGLvyAELSSALPRSGGIYV-YLENAFGKFVAFLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  173 TWLFCIQWLTVLPLELIT-SSMTVKYWNDTINAD-----VFIVIFYVFLLFIHFFGVKAYGETEFIFNSCKILMVAGFII 246
Cdd:pfam13520  81 GWSNWFAYVLGLASSASVaASYLLSALGPDLVPTtwltyGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  247 LSVVIncggagvdgYIGGKYWRDPGSFAEGSGATRFKGICYILVSAYFSFGGIELFVLSINEqsNPRKSTPVAAKRSVYR 326
Cdd:pfam13520 161 ILGLV---------TADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEE--VKKRNVPKAIFIGVII 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  327 ILIIYLLTMILIGFNVPHnnDQLMGSGGSATHASPYVLAASIHKVRvipHIINAVILISVISVANSALYAAPRLMCSLAQ 406
Cdd:pfam13520 230 VGVLYILVNIAFFGVVPD--DEIALSSGLGQVAALLFQAVGGKWGA---IIVVILLALSLLGAVNTAIVGASRLLYALAR 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  407 QGYAP--KFLNYIDREGRPLRALVVCSLVGVVGFVACSPQEEqAFTWLAAIAGLSELFTWSGIMLSHIRFRKAMKVQGRS 484
Cdd:pfam13520 305 DGVLPfsRFFAKVNKFGSPIRAIILTAILSLILLLLFLLSPA-AYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRI 383
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
86-436 2.93e-11

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 65.92  E-value: 2.93e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249   86 LKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSLAG-PGSLVIGYVMVSFVTYFMVQAAGEMGVTYPTLPGNFNAYNSIFi 164
Cdd:TIGR00911  40 LKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGsVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVF- 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  165 SKSFGFATTWlfcIQWLTVLP-----LELITSSMTVKYWNDT-----INADVFIVIFYVFLLFIHFFGVKAYGETEFIFN 234
Cdd:TIGR00911 119 GPLLAFLRLW---IELLVIRPgsqavNALNFAIYILTPVFPDcevpeWAIRLVAVLCVLLLTLVNCLSVKWATRVQDIFT 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  235 SCKILMVAGFIILSVVINCGgagvdgyiGGKYWRDPGSFAEGSGATRFkGICYILVSAYFSFGGIELFVLSINEQSNPRK 314
Cdd:TIGR00911 196 ACKLLALLLIIITGWVQLGK--------GGVESLNPKNAFEGTETSAG-GIVLAFYSGIWAYGGWNYLNFVTEEVKNPYR 266
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  315 STPVAAKRSVYRILIIYLLTMILIGFNVPhnNDQLMGSGGSATHASPYVLAasihkvrVIPHIINAVILISVISVANSAL 394
Cdd:TIGR00911 267 TLPIAIIISMPIVTFIYVLTNIAYFTVLS--PEELLASLAVAVDFGERLLG-------VMSWAMPALVGLSCFGSVNGSL 337
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 398365249  395 YAAPRLMCSLAQQGYAPKFLNYID-REGRPLRALVVCSLVGVV 436
Cdd:TIGR00911 338 FSSSRLFFVGGREGHLPSLLSMIHvKRLTPLPSLLIVCTLTLL 380
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
77-436 1.93e-05

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 47.50  E-value: 1.93e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249   77 TKSMKSNNHLKKSMKSRHVVMMSLGTGIGTGLLV-ANAKGLSLAGPgSLVIGYVMVSFVTYFMVQAAGEMGVTYPTLPGN 155
Cdd:TIGR00906  17 DLDSREESKMKRCLTTWDLMALGIGSTIGAGIYVlTGEVARNDSGP-AIVLSFLISGLAAVLSGFCYAEFGARVPKAGSA 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  156 FnAYNSIFISKSFGFATTWlfciqwltVLPLE-LITSSMTVKYWNDT------------------INADVFIV---IFYV 213
Cdd:TIGR00906  96 Y-LYSYVTVGELWAFITGW--------NLILEyVIGTAAVARSWSAYfdellnkqigqfrrtyfkLNYDGLAEypdFFAV 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  214 FLLFI----HFFGVKAYGETEFIFNSCKIL-----MVAGFIILSVvincggagvdgyiggKYWrdpgSFAEGSGATRFK- 283
Cdd:TIGR00906 167 CLILLlavlLSFGVKESAWVNKIFTAINILvllfvIIAGFTKADV---------------ANW----SITEEKGAGGFMp 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398365249  284 -GICYILVSA---YFSFGGIELFVLSINEQSNPRKSTPVAAKRSVYRILIIYLLTMILIGFNVPHnnDQLmgsggsaTHA 359
Cdd:TIGR00906 228 yGFTGVLSGAatcFFAFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPY--YLL-------DPD 298
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 398365249  360 SPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRLMCSLAQQGYAPKFLNYI-DREGRPLRALVVCSLVGVV 436
Cdd:TIGR00906 299 APFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQInSKTKTPINATVVSGAIAAL 376
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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