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Conserved domains on  [gi|6320900|ref|NP_010979|]
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Pet117p [Saccharomyces cerevisiae S288C]

Protein Classification

protein PET117( domain architecture ID 11239238)

mitochondrial protein PET117 is involved in the assembly of cytochrome c oxidase

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PET117 pfam15786
PET assembly of cytochrome c oxidase, mitochondrial; PET117 is a family of eukaryotic proteins ...
 5-88 1.87e-26

PET assembly of cytochrome c oxidase, mitochondrial; PET117 is a family of eukaryotic proteins found from fungi and plants to human. It is likely to be involved in the assembly of cytochrome C oxidase, and is found in the mitochondrion.


:

Pssm-ID: 434937  Cd Length: 66  Bit Score: 92.56  E-value: 1.87e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320900      5 SKITFAASCLITAATVVGVHYVQEMERETLHQGPIKDAKRVEEKRLrktngvasldptkerkryFNMSEHEEQKELRKKY 84
Cdd:pfam15786   1 SKITLGLSCLFTAGTVVGVHYKQEQEREALHQGVIRDAERQREKRR------------------ENQLELEEQRELRKEY 62


                  ....
gi 6320900     85 ETMQ 88
Cdd:pfam15786  63 EKVQ 66
 
Name Accession Description Interval E-value
PET117 pfam15786
PET assembly of cytochrome c oxidase, mitochondrial; PET117 is a family of eukaryotic proteins ...
 5-88 1.87e-26

PET assembly of cytochrome c oxidase, mitochondrial; PET117 is a family of eukaryotic proteins found from fungi and plants to human. It is likely to be involved in the assembly of cytochrome C oxidase, and is found in the mitochondrion.


Pssm-ID: 434937  Cd Length: 66  Bit Score: 92.56  E-value: 1.87e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320900      5 SKITFAASCLITAATVVGVHYVQEMERETLHQGPIKDAKRVEEKRLrktngvasldptkerkryFNMSEHEEQKELRKKY 84
Cdd:pfam15786   1 SKITLGLSCLFTAGTVVGVHYKQEQEREALHQGVIRDAERQREKRR------------------ENQLELEEQRELRKEY 62


                  ....
gi 6320900     85 ETMQ 88
Cdd:pfam15786  63 EKVQ 66
 
Name Accession Description Interval E-value
PET117 pfam15786
PET assembly of cytochrome c oxidase, mitochondrial; PET117 is a family of eukaryotic proteins ...
 5-88 1.87e-26

PET assembly of cytochrome c oxidase, mitochondrial; PET117 is a family of eukaryotic proteins found from fungi and plants to human. It is likely to be involved in the assembly of cytochrome C oxidase, and is found in the mitochondrion.


Pssm-ID: 434937  Cd Length: 66  Bit Score: 92.56  E-value: 1.87e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320900      5 SKITFAASCLITAATVVGVHYVQEMERETLHQGPIKDAKRVEEKRLrktngvasldptkerkryFNMSEHEEQKELRKKY 84
Cdd:pfam15786   1 SKITLGLSCLFTAGTVVGVHYKQEQEREALHQGVIRDAERQREKRR------------------ENQLELEEQRELRKEY 62


                  ....
gi 6320900     85 ETMQ 88
Cdd:pfam15786  63 EKVQ 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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