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Concise Results
Standard Results
Full Results
Hnm1p [Saccharomyces cerevisiae S288C]
Protein Classification
2A0304 family protein ( domain architecture ID 11489950 )
2A0304 family protein
List of domain hits
Name
Accession
Description
Interval
E-value
2A0304
TIGR00907 amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
45-521
0e+00
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273331 [Multi-domain]
Cd Length: 482
Bit Score: 655.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 45 A VA ADGEVH L RKS FSLWSI L G VG F GLT NSW F GIST SMVA G I SSGG P M M IV Y G I II VALI SICI GT SL G ELSSAYP HA GGQ 124
Cdd:TIGR00907 1 L VA LGYKPE L KRE FSLWSI F G FA F SIS NSW T GIST TYNY G L SSGG A M S IV W G W II AGAG SICI AL SL A ELSSAYP TS GGQ 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 125 FW WS L KLAPP KYKR FA AY M C G S F AY AG S V FTS AST T LSVA TEVV G MYA LT H P -- E F IP K RWHIF VCFELL HL FLMFF N CY 202
Cdd:TIGR00907 81 YF WS A KLAPP RQMP FA SW M T G W F NL AG Q V AGT AST D LSVA QLIL G IVS LT T P gr E Y IP T RWHIF GIMIGI HL IHALI N SL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 203 G - K S LP I I S SS SL Y I SLL S F F TI T IT V LAC SHG KFND A KFVF AT FNN E TG - WK N GG I AF IV GL I NPAWS FSCL D CAT HMA 280
Cdd:TIGR00907 161 P t K W LP R I T SS AA Y W SLL G F L TI C IT L LAC KSP KFND G KFVF TN FNN S TG g WK P GG F AF LL GL L NPAWS MTGY D GTA HMA 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 281 F E V E K PE R V I P I AI M G T VAIG F VT S FC YV I AM FFS IQ D L D AVL SSTTG A PI LD I YNQ ALGNK S GAIFL G CLIL F TSF G C V 360
Cdd:TIGR00907 241 E E I E N PE V V G P R AI I G A VAIG I VT G FC FN I VL FFS MG D I D SLI SSTTG Q PI AQ I FYN ALGNK A GAIFL L CLIL V TSF F C A 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 361 I A C H T WQA R LCWS F A RD N GLP L S R LWS Q VNP H T G VPLNA HLM S CA WI T LIGLL Y L A SSTAFQ SLITG C IAF L LL SY I IP V 440
Cdd:TIGR00907 321 I T C M T ANS R MIYA F S RD G GLP F S P LWS R VNP R T Q VPLNA VWL S AV WI I LIGLL G L G SSTAFQ AIFSV C TVA L DV SY V IP I 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 441 IC L LAK K RN - IA H GPFWLGK F GFF S N I V LLG WTVFS V V F FSFPPVLPVT KD NMNY VC VV IV G YT A Y S IL YWKYKG K KEF H 519
Cdd:TIGR00907 401 IC K LAK G RN t IA P GPFWLGK Y GFF V N A V AVA WTVFS S V L FSFPPVLPVT PE NMNY AV VV FA G VL A I S LV YWKYKG R KEF T 480
..
gi 6321361 520 AL 521
Cdd:TIGR00907 481 GP 482
Name
Accession
Description
Interval
E-value
2A0304
TIGR00907 amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
45-521
0e+00
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273331 [Multi-domain]
Cd Length: 482
Bit Score: 655.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 45 A VA ADGEVH L RKS FSLWSI L G VG F GLT NSW F GIST SMVA G I SSGG P M M IV Y G I II VALI SICI GT SL G ELSSAYP HA GGQ 124
Cdd:TIGR00907 1 L VA LGYKPE L KRE FSLWSI F G FA F SIS NSW T GIST TYNY G L SSGG A M S IV W G W II AGAG SICI AL SL A ELSSAYP TS GGQ 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 125 FW WS L KLAPP KYKR FA AY M C G S F AY AG S V FTS AST T LSVA TEVV G MYA LT H P -- E F IP K RWHIF VCFELL HL FLMFF N CY 202
Cdd:TIGR00907 81 YF WS A KLAPP RQMP FA SW M T G W F NL AG Q V AGT AST D LSVA QLIL G IVS LT T P gr E Y IP T RWHIF GIMIGI HL IHALI N SL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 203 G - K S LP I I S SS SL Y I SLL S F F TI T IT V LAC SHG KFND A KFVF AT FNN E TG - WK N GG I AF IV GL I NPAWS FSCL D CAT HMA 280
Cdd:TIGR00907 161 P t K W LP R I T SS AA Y W SLL G F L TI C IT L LAC KSP KFND G KFVF TN FNN S TG g WK P GG F AF LL GL L NPAWS MTGY D GTA HMA 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 281 F E V E K PE R V I P I AI M G T VAIG F VT S FC YV I AM FFS IQ D L D AVL SSTTG A PI LD I YNQ ALGNK S GAIFL G CLIL F TSF G C V 360
Cdd:TIGR00907 241 E E I E N PE V V G P R AI I G A VAIG I VT G FC FN I VL FFS MG D I D SLI SSTTG Q PI AQ I FYN ALGNK A GAIFL L CLIL V TSF F C A 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 361 I A C H T WQA R LCWS F A RD N GLP L S R LWS Q VNP H T G VPLNA HLM S CA WI T LIGLL Y L A SSTAFQ SLITG C IAF L LL SY I IP V 440
Cdd:TIGR00907 321 I T C M T ANS R MIYA F S RD G GLP F S P LWS R VNP R T Q VPLNA VWL S AV WI I LIGLL G L G SSTAFQ AIFSV C TVA L DV SY V IP I 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 441 IC L LAK K RN - IA H GPFWLGK F GFF S N I V LLG WTVFS V V F FSFPPVLPVT KD NMNY VC VV IV G YT A Y S IL YWKYKG K KEF H 519
Cdd:TIGR00907 401 IC K LAK G RN t IA P GPFWLGK Y GFF V N A V AVA WTVFS S V L FSFPPVLPVT PE NMNY AV VV FA G VL A I S LV YWKYKG R KEF T 480
..
gi 6321361 520 AL 521
Cdd:TIGR00907 481 GP 482
AA_permease_2
pfam13520 Amino acid permease;
58-502
2.04e-43
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 160.17
E-value: 2.04e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 58 FS L W S ILGVGF G LT nsw F G ISTSMVAGIS SGGP MM IV Y G I I IVALI S ICI G TSLG ELSSA Y P HA GG QFWWSLKL appk YK 137
Cdd:pfam13520 1 LG L L S AFALVI G SV --- I G SGIFVAPLVA SGGP AL IV W G W I AAIIF S LAV G LVYA ELSSA L P RS GG IYVYLENA ---- FG 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 138 R F A A YMC G SFAYAGS V FTS AS TTLSV A TEVVG mya LTH P EFI P KR W HIFVCFELLHLFLMFF N CY G KSLPIISSSS L Y I S 217
Cdd:pfam13520 74 K F V A FLA G WSNWFAY V LGL AS SASVA A SYLLS --- ALG P DLV P TT W LTYGIAIAILIIFAII N IR G VRESAKIQNI L G I L 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 218 L L SFFT I T I TV L AC sh GKFNDAK F VFATFNNE T GWKN G GIAFIV G LINPA WSF SCLDC A THMAF EV ek PE R VI P I AI MGT 297
Cdd:pfam13520 151 K L LLPL I L I II L GL -- VTADGGG F NLLSGEWH T FFPD G WPGVFA G FLGVL WSF TGFES A ANVSE EV -- KK R NV P K AI FIG 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 298 V A I GF V TSFCYV IA M F FSIQ D LDAV LSS TT G APIL d IYN QA L G N K S GAI FLGC L ILFTSF G C V IACHTWQA RL CWSF ARD 377
Cdd:pfam13520 227 V I I VG V LYILVN IA F F GVVP D DEIA LSS GL G QVAA - LLF QA V G G K W GAI IVVI L LALSLL G A V NTAIVGAS RL LYAL ARD 305
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 378 NG LP L SR LWSQ VN PH t G V P LN A HLMSCAWITLIG LL Y L A S ST A FQS L ITGCIAFL LLSY II P V I C LL AKKRN ia HGPFWL 457
Cdd:pfam13520 306 GV LP F SR FFAK VN KF - G S P IR A IILTAILSLILL LL F L L S PA A YNA L LSLSAYGY LLSY LL P I I G LL ILRKK -- RPDLGR 382
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 6321361 458 GKFGFFSN I VLLGWTV F SV V FFS FPPV L P V T KDNM NY VCVV IV GY 502
Cdd:pfam13520 383 IPGRWPVA I FGILFSL F LI V ALF FPPV G P A T GSSL NY AIIL IV AF 427
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
47-527
1.05e-34
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 136.18
E-value: 1.05e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 47 AADGEVH L RKSFS L WSILGV G F G LTNSW f GI STSMVAGISSG GP MM I V y GII I VA L ISICIGT S LG EL S SA Y P H AGG QFW 126
Cdd:COG0531 2 SRGESSE L KRKLG L FDLVAL G V G AIIGA - GI FVLPGLAAGLA GP AA I L - AWL I AG L LALLVAL S YA EL A SA F P R AGG AYT 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 127 WSLKL appk YKRFAAYMC G SFAYAGS V FTS A STTLSVATEVVG myalthpe FI P KRWHIFVCFE L L h L F L MFF N CY G KSL 206
Cdd:COG0531 80 YARRA ---- LGPLLGFLA G WALLLSY V LAV A AVAVAFGGYLSS -------- LF P AGGSVLIALV L I - L L L TLL N LR G VKE 146
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 207 PIISSSS L YISL L SFFTIT I T V LACSHGKF N dakfv F AT F NNET G wkn G GIAFIVG L INPAWS F SCLDCATHM A F E VEK P 286
Cdd:COG0531 147 SAKVNNI L TVLK L LVLLLF I V V GLFAFDPA N ----- F TP F LPAG G --- G LSGVLAA L ALAFFA F TGFEAIANL A E E AKN P 218
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 287 E R V IP I AI MGTVA I GF V -- TSFCYVIAMFFSIQD L D A vlsst T GAP IL D IYNQAL G N k S GAI FLGCLI L FTSF G CVI A CH 364
Cdd:COG0531 219 K R N IP R AI ILSLL I VG V ly ILVSLALTGVVPYDE L A A ----- S GAP LA D AAEAVF G P - W GAI LIALGA L LSLL G ALN A SI 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 365 TWQA RL CWSF ARD NG LP ls RLWSQ V N P HT G V P L NA H L MSCA wit LIG LL Y L ASSTA F QS L ITGCIAFL LL S Y IIPVICL - 443
Cdd:COG0531 293 LGAS RL LYAM ARD GL LP -- KVFAK V H P RF G T P V NA I L LTGV --- IAL LL L L LGAAS F TA L ASLASVGV LL A Y LLVALAV i 367
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 444 - L AKK R NIAHG PF WLGKFG ffsn I VL LG WTVFSVVFFSFP P VLP vtkdnmnyvc VVIVGYT A YSI L YWKYKGKKEFHA L E 522
Cdd:COG0531 368 v L RRR R PDLPR PF RVPLPL ---- I PI LG ILLCLFLLYLLG P GAL ---------- LIGLVLL A IGL L LYLLYRRRHPKL L K 433
....*
gi 6321361 523 E S E N E 527
Cdd:COG0531 434 E A E E E 438
frlA
PRK11357 amino acid permease;
54-438
5.20e-09
amino acid permease;
Pssm-ID: 183096 [Multi-domain]
Cd Length: 445
Bit Score: 58.71
E-value: 5.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 54 L RKSFSL W SI L GVGF G L T - N S WFGI S TSM VA G i SS G G P MMI V YGII I VA LI S I CIGTSLG ELS S AYP HA G GQFWW s LK L A 132
Cdd:PRK11357 6 L QRKLGF W AV L AIAV G T T v G S GIFV S VGE VA K - AA G T P WLT V LAFV I GG LI V I PQMCVYA ELS T AYP EN G ADYVY - LK N A 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 133 P pky K R FA A YMC G SFAYAGSVFT S A S TTLSVATEVV G MYALTH P EFIP krwhif VCFEL L HLFL M FFNCYGKSLPIISSS 212
Cdd:PRK11357 84 G --- S R PL A FLS G WASFWANDAP S L S IMALAIVSNL G FLTPID P LLGK ------ FIAAG L IIAF M LLHLRSVEGGAAFQT 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 213 SLY I SLLSF FTI T I TVLAC shgk FND A KFVF A TFNNET G WKNGGI A FIV G LINPA WS FSCLDCATH M AF E VEK P ERVI P I 292
Cdd:PRK11357 155 LIT I AKIIP FTI V I GLGIF ---- WFK A ENFA A PTTTAI G ATGSFM A LLA G ISATS WS YTGMASICY M TG E IKN P GKTM P R 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 293 A IM G TV aig FVTSFC Y VIAMFFSIQDLDAVLSSTTGA PI L D IYNQ -- ALG NKS G a IF LGCLILFTSF G CVIA C HTW Q A RL 370
Cdd:PRK11357 231 A LI G SC --- LLVLVL Y TLLALVISGLMPFDKLANSET PI S D ALTW ip ALG STA G - IF VAITAMIVIL G SLSS C VMY Q P RL 306
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6321361 371 CWSF A R DN gl PLSRLWSQ V N P HTGV P LNAHLMSC A W - I TL I GLLY L A S STAFQS L ITGCIAF L LLSY II 438
Cdd:PRK11357 307 EYAM A K DN -- LFFKCFGH V H P KYNT P DVSIILQG A L g I FF I FVSD L T S LLGYFT L VMCFKNT L TFGS II 373
SLC-NCS1sbd_CobB-like
cd11484 nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain; This NCS1 ...
44-109
5.02e-03
nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain; This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).
Pssm-ID: 271377 [Multi-domain]
Cd Length: 406
Bit Score: 39.52
E-value: 5.02e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6321361 44 GAVA AD GEVHLRK S FSLWSILGV GF GLT NS W --- F G ISTSMVA G ISSGGPM MI VY G II I V A LISICIGT 109
Cdd:cd11484 198 ATYT AD YSRYAKS S KKAFWATFL GF FVG NS L mmi L G ALLAAAT G TADISEV MI AQ G LG I P A ILVLVLNI 266
Name
Accession
Description
Interval
E-value
2A0304
TIGR00907 amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
45-521
0e+00
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273331 [Multi-domain]
Cd Length: 482
Bit Score: 655.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 45 A VA ADGEVH L RKS FSLWSI L G VG F GLT NSW F GIST SMVA G I SSGG P M M IV Y G I II VALI SICI GT SL G ELSSAYP HA GGQ 124
Cdd:TIGR00907 1 L VA LGYKPE L KRE FSLWSI F G FA F SIS NSW T GIST TYNY G L SSGG A M S IV W G W II AGAG SICI AL SL A ELSSAYP TS GGQ 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 125 FW WS L KLAPP KYKR FA AY M C G S F AY AG S V FTS AST T LSVA TEVV G MYA LT H P -- E F IP K RWHIF VCFELL HL FLMFF N CY 202
Cdd:TIGR00907 81 YF WS A KLAPP RQMP FA SW M T G W F NL AG Q V AGT AST D LSVA QLIL G IVS LT T P gr E Y IP T RWHIF GIMIGI HL IHALI N SL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 203 G - K S LP I I S SS SL Y I SLL S F F TI T IT V LAC SHG KFND A KFVF AT FNN E TG - WK N GG I AF IV GL I NPAWS FSCL D CAT HMA 280
Cdd:TIGR00907 161 P t K W LP R I T SS AA Y W SLL G F L TI C IT L LAC KSP KFND G KFVF TN FNN S TG g WK P GG F AF LL GL L NPAWS MTGY D GTA HMA 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 281 F E V E K PE R V I P I AI M G T VAIG F VT S FC YV I AM FFS IQ D L D AVL SSTTG A PI LD I YNQ ALGNK S GAIFL G CLIL F TSF G C V 360
Cdd:TIGR00907 241 E E I E N PE V V G P R AI I G A VAIG I VT G FC FN I VL FFS MG D I D SLI SSTTG Q PI AQ I FYN ALGNK A GAIFL L CLIL V TSF F C A 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 361 I A C H T WQA R LCWS F A RD N GLP L S R LWS Q VNP H T G VPLNA HLM S CA WI T LIGLL Y L A SSTAFQ SLITG C IAF L LL SY I IP V 440
Cdd:TIGR00907 321 I T C M T ANS R MIYA F S RD G GLP F S P LWS R VNP R T Q VPLNA VWL S AV WI I LIGLL G L G SSTAFQ AIFSV C TVA L DV SY V IP I 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 441 IC L LAK K RN - IA H GPFWLGK F GFF S N I V LLG WTVFS V V F FSFPPVLPVT KD NMNY VC VV IV G YT A Y S IL YWKYKG K KEF H 519
Cdd:TIGR00907 401 IC K LAK G RN t IA P GPFWLGK Y GFF V N A V AVA WTVFS S V L FSFPPVLPVT PE NMNY AV VV FA G VL A I S LV YWKYKG R KEF T 480
..
gi 6321361 520 AL 521
Cdd:TIGR00907 481 GP 482
AA_permease_2
pfam13520 Amino acid permease;
58-502
2.04e-43
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 160.17
E-value: 2.04e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 58 FS L W S ILGVGF G LT nsw F G ISTSMVAGIS SGGP MM IV Y G I I IVALI S ICI G TSLG ELSSA Y P HA GG QFWWSLKL appk YK 137
Cdd:pfam13520 1 LG L L S AFALVI G SV --- I G SGIFVAPLVA SGGP AL IV W G W I AAIIF S LAV G LVYA ELSSA L P RS GG IYVYLENA ---- FG 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 138 R F A A YMC G SFAYAGS V FTS AS TTLSV A TEVVG mya LTH P EFI P KR W HIFVCFELLHLFLMFF N CY G KSLPIISSSS L Y I S 217
Cdd:pfam13520 74 K F V A FLA G WSNWFAY V LGL AS SASVA A SYLLS --- ALG P DLV P TT W LTYGIAIAILIIFAII N IR G VRESAKIQNI L G I L 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 218 L L SFFT I T I TV L AC sh GKFNDAK F VFATFNNE T GWKN G GIAFIV G LINPA WSF SCLDC A THMAF EV ek PE R VI P I AI MGT 297
Cdd:pfam13520 151 K L LLPL I L I II L GL -- VTADGGG F NLLSGEWH T FFPD G WPGVFA G FLGVL WSF TGFES A ANVSE EV -- KK R NV P K AI FIG 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 298 V A I GF V TSFCYV IA M F FSIQ D LDAV LSS TT G APIL d IYN QA L G N K S GAI FLGC L ILFTSF G C V IACHTWQA RL CWSF ARD 377
Cdd:pfam13520 227 V I I VG V LYILVN IA F F GVVP D DEIA LSS GL G QVAA - LLF QA V G G K W GAI IVVI L LALSLL G A V NTAIVGAS RL LYAL ARD 305
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 378 NG LP L SR LWSQ VN PH t G V P LN A HLMSCAWITLIG LL Y L A S ST A FQS L ITGCIAFL LLSY II P V I C LL AKKRN ia HGPFWL 457
Cdd:pfam13520 306 GV LP F SR FFAK VN KF - G S P IR A IILTAILSLILL LL F L L S PA A YNA L LSLSAYGY LLSY LL P I I G LL ILRKK -- RPDLGR 382
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 6321361 458 GKFGFFSN I VLLGWTV F SV V FFS FPPV L P V T KDNM NY VCVV IV GY 502
Cdd:pfam13520 383 IPGRWPVA I FGILFSL F LI V ALF FPPV G P A T GSSL NY AIIL IV AF 427
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
47-527
1.05e-34
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 136.18
E-value: 1.05e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 47 AADGEVH L RKSFS L WSILGV G F G LTNSW f GI STSMVAGISSG GP MM I V y GII I VA L ISICIGT S LG EL S SA Y P H AGG QFW 126
Cdd:COG0531 2 SRGESSE L KRKLG L FDLVAL G V G AIIGA - GI FVLPGLAAGLA GP AA I L - AWL I AG L LALLVAL S YA EL A SA F P R AGG AYT 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 127 WSLKL appk YKRFAAYMC G SFAYAGS V FTS A STTLSVATEVVG myalthpe FI P KRWHIFVCFE L L h L F L MFF N CY G KSL 206
Cdd:COG0531 80 YARRA ---- LGPLLGFLA G WALLLSY V LAV A AVAVAFGGYLSS -------- LF P AGGSVLIALV L I - L L L TLL N LR G VKE 146
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 207 PIISSSS L YISL L SFFTIT I T V LACSHGKF N dakfv F AT F NNET G wkn G GIAFIVG L INPAWS F SCLDCATHM A F E VEK P 286
Cdd:COG0531 147 SAKVNNI L TVLK L LVLLLF I V V GLFAFDPA N ----- F TP F LPAG G --- G LSGVLAA L ALAFFA F TGFEAIANL A E E AKN P 218
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 287 E R V IP I AI MGTVA I GF V -- TSFCYVIAMFFSIQD L D A vlsst T GAP IL D IYNQAL G N k S GAI FLGCLI L FTSF G CVI A CH 364
Cdd:COG0531 219 K R N IP R AI ILSLL I VG V ly ILVSLALTGVVPYDE L A A ----- S GAP LA D AAEAVF G P - W GAI LIALGA L LSLL G ALN A SI 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 365 TWQA RL CWSF ARD NG LP ls RLWSQ V N P HT G V P L NA H L MSCA wit LIG LL Y L ASSTA F QS L ITGCIAFL LL S Y IIPVICL - 443
Cdd:COG0531 293 LGAS RL LYAM ARD GL LP -- KVFAK V H P RF G T P V NA I L LTGV --- IAL LL L L LGAAS F TA L ASLASVGV LL A Y LLVALAV i 367
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 444 - L AKK R NIAHG PF WLGKFG ffsn I VL LG WTVFSVVFFSFP P VLP vtkdnmnyvc VVIVGYT A YSI L YWKYKGKKEFHA L E 522
Cdd:COG0531 368 v L RRR R PDLPR PF RVPLPL ---- I PI LG ILLCLFLLYLLG P GAL ---------- LIGLVLL A IGL L LYLLYRRRHPKL L K 433
....*
gi 6321361 523 E S E N E 527
Cdd:COG0531 434 E A E E E 438
AA_permease
pfam00324 Amino acid permease;
76-523
5.00e-16
Amino acid permease;
Pssm-ID: 366028 [Multi-domain]
Cd Length: 467
Bit Score: 80.83
E-value: 5.00e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 76 G ISTSMVAGISSG GP MMIVY G II I VALISICIGT SLGE L S SAY P HA GG qfww SLKL A PPKYKRFAAYMC G ------ SFAY 149
Cdd:pfam00324 14 G LFVGSGSVLGQA GP AGALL G YL I SGVVIFLVML SLGE I S TNG P VS GG ---- FYTY A SRFLGPSLGFAT G wnywls WITV 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 150 AGSVF T S AS TTLSVATE V VG myalthpef IP KR W HIFVC F EL L HLFLMFFNC -- YG K s LPIISSSSLY I SLLS F FTIT I T 227
Cdd:pfam00324 90 LALEL T A AS ILIQFWEL V PD --------- IP YL W VWGAV F LV L LTIINLVGV kw YG E - AEFWFALIKI I AIIG F IIVG I I 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 228 V L ACSHGK f ND A K F VFATF N NETGWKNG G I -- A FI VGLINPAWS F SCLDCATHM A F EV EK PE RV IP I AI MGTVAI gfv TS 305
Cdd:pfam00324 160 L L SGGNPN - DG A I F RYLGD N GGKNNFPP G F gk G FI SVFVIAFFA F TGIELVGIA A G EV KN PE KS IP K AI LQVIWR --- IT 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 306 FC Y VIAMFFSI ----- Q D LDAVLS S TTG A PILD I YNQA LG NKSG A IFLGCL IL FTSFGCVIACHTWQA R LCW S F ARD NGL 380
Cdd:pfam00324 236 IF Y ILSLLAIG llvpw N D PGLLND S ASA A SPFV I FFKF LG ISGL A PLINAV IL TAALSAANSSLYSGS R MLY S L ARD GLA 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 381 P lsr LWSQVNPHT GVPL N A H L M S CAW --- IT L IGL L YL A SSTA F QSL I T G CIAFL ----- L LS YIIPVICLLAKK R N I AH 452
Cdd:pfam00324 316 P --- KFLKKVDKR GVPL R A I L V S MVI sll AL L LAS L NP A IVFN F LLA I S G LSGLI vwgli S LS HLRFRKAFKYQG R S I DE 392
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6321361 453 G PF -- W LG KF G FF s NIVLLGWTVFSVV F FSFPPVL P VTKD N MNYVCVV -- IVGYTAYS I LYWKY K GKKEFHALEE 523
Cdd:pfam00324 393 L PF ka P LG PL G VI - LGLAAIIIILIIQ F LYAFLPV P GGPK N WGAGSFA aa YLIVLLFL I ILIGV K LHVKNWKPQL 466
frlA
PRK11357 amino acid permease;
54-438
5.20e-09
amino acid permease;
Pssm-ID: 183096 [Multi-domain]
Cd Length: 445
Bit Score: 58.71
E-value: 5.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 54 L RKSFSL W SI L GVGF G L T - N S WFGI S TSM VA G i SS G G P MMI V YGII I VA LI S I CIGTSLG ELS S AYP HA G GQFWW s LK L A 132
Cdd:PRK11357 6 L QRKLGF W AV L AIAV G T T v G S GIFV S VGE VA K - AA G T P WLT V LAFV I GG LI V I PQMCVYA ELS T AYP EN G ADYVY - LK N A 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 133 P pky K R FA A YMC G SFAYAGSVFT S A S TTLSVATEVV G MYALTH P EFIP krwhif VCFEL L HLFL M FFNCYGKSLPIISSS 212
Cdd:PRK11357 84 G --- S R PL A FLS G WASFWANDAP S L S IMALAIVSNL G FLTPID P LLGK ------ FIAAG L IIAF M LLHLRSVEGGAAFQT 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 213 SLY I SLLSF FTI T I TVLAC shgk FND A KFVF A TFNNET G WKNGGI A FIV G LINPA WS FSCLDCATH M AF E VEK P ERVI P I 292
Cdd:PRK11357 155 LIT I AKIIP FTI V I GLGIF ---- WFK A ENFA A PTTTAI G ATGSFM A LLA G ISATS WS YTGMASICY M TG E IKN P GKTM P R 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 293 A IM G TV aig FVTSFC Y VIAMFFSIQDLDAVLSSTTGA PI L D IYNQ -- ALG NKS G a IF LGCLILFTSF G CVIA C HTW Q A RL 370
Cdd:PRK11357 231 A LI G SC --- LLVLVL Y TLLALVISGLMPFDKLANSET PI S D ALTW ip ALG STA G - IF VAITAMIVIL G SLSS C VMY Q P RL 306
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6321361 371 CWSF A R DN gl PLSRLWSQ V N P HTGV P LNAHLMSC A W - I TL I GLLY L A S STAFQS L ITGCIAF L LLSY II 438
Cdd:PRK11357 307 EYAM A K DN -- LFFKCFGH V H P KYNT P DVSIILQG A L g I FF I FVSD L T S LLGYFT L VMCFKNT L TFGS II 373
2A0308
TIGR00911 L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
31-484
7.49e-07
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain]
Cd Length: 501
Bit Score: 51.67
E-value: 7.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 31 EEEIKPLDDMD S KGA V AADGE V H L R K SFS L W S IL G -- VG FGLTNSW F GISTSMVAGIS S G G PMM I VY gi IIVALI SI CIG 108
Cdd:TIGR00911 17 QFSSSGRKKSV S AST V DGGEA V A L K K EIT L L S GV G ii VG TIIGSGI F VSPKGVLKNAG S V G LAL I MW -- AVCGIF SI VGA 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 109 TSLG EL SSAY P HA GG QFWWS L KL appk YKRFA A YM cg SFAYAGS V FTSA S T tl S V ATEVVGM Y A LT h P E F I --- PKR W H I 185
Cdd:TIGR00911 95 LVYA EL GTTI P KS GG EYNYI L EV ---- FGPLL A FL -- RLWIELL V IRPG S Q -- A V NALNFAI Y I LT - P V F P dce VPE W A I 165
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 186 FVCFE L LH L F L MFF NC YG - K SLPIISSSSLYIS LL SFFT I T IT - VLACSH G KFNDAKFVF A TFNN ET GWKNGGI AF IV G L 263
Cdd:TIGR00911 166 RLVAV L CV L L L TLV NC LS v K WATRVQDIFTACK LL ALLL I I IT g WVQLGK G GVESLNPKN A FEGT ET SAGGIVL AF YS G I 245
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 264 inpa W SFSCLDCATHMAF EV EK P E R VI PIAI M gt VAIGF VT s F C YV IA -- MF F SIQDLDAV L S S TTG A pi L D IYNQA LG N 341
Cdd:TIGR00911 246 ---- W AYGGWNYLNFVTE EV KN P Y R TL PIAI I -- ISMPI VT - F I YV LT ni AY F TVLSPEEL L A S LAV A -- V D FGERL LG V 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 342 K S G A I fl GC L ILFTS FG C V IACHTWQA RL CWSFA R DNG LP LSRLWSQ V NPH T gv PL NAH L MS C awit LIG LL Y L A S STAF 421
Cdd:TIGR00911 317 M S W A M -- PA L VGLSC FG S V NGSLFSSS RL FFVGG R EGH LP SLLSMIH V KRL T -- PL PSL L IV C ---- TLT LL M L F S GDIY 388
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6321361 422 q SLI -- TGCIAF L LLSYIIPVICL L AK KR NIAHG P FWLGK fg FF SNIV LL GWTVFSVVFFSF PPV 484
Cdd:TIGR00911 389 - SLI nl ISFANW L FNALAVAGLLW L RY KR PEMNR P IKVPL -- FF PVFF LL SCLFLIILSLYS PPV 450
PRK11021
PRK11021 putative transporter; Provisional
234-413
8.54e-07
putative transporter; Provisional
Pssm-ID: 236823 [Multi-domain]
Cd Length: 410
Bit Score: 51.45
E-value: 8.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 234 G KFND A KFV F ATFNNETGWKNG --- G IA F ivglinpa W S F SCLDCAT H M A F E VEK PER VI P I A I M - G TVAI G F V TSF C Y V 309
Cdd:PRK11021 159 G DIKP A DIP F PAPGSIEWSGLF aal G VM F -------- W C F VGIEAFA H L A S E FKN PER DF P R A L M i G LLLA G L V YWA C T V 230
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 310 IAMF F SIQDLDA vlss TTG A PILD I YN Q AL G NKSGAI ----- F L G C L ---- I LFT SF gcviachtwq ARL C WS F AR DNGL 380
Cdd:PRK11021 231 VVLH F PAYGDKQ ---- AAA A SLPG I FV Q LF G GYALWV icvig Y L A C F asvn I YTQ SF ---------- ARL V WS Q AR EGRP 296
170 180 190
....*....|....*....|....*....|....*.
gi 6321361 381 P l S R L w SQVNPH t GVP L NA H --- L MS CA WIT L IGLL 413
Cdd:PRK11021 297 P - S Y L - ARLSAR - GVP V NA L nav L GC CA VSI L LIYA 329
2A0303
TIGR00906 cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
74-444
3.65e-04
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain]
Cd Length: 557
Bit Score: 43.27
E-value: 3.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 74 WF GI STSMV AGI --------- SSG GP M m IV YGII I VA L ISICI G TSLG E LSSAY P H AG ---------- G QF W ----- W S L 129
Cdd:TIGR00906 37 AL GI GSTIG AGI yvltgevar NDS GP A - IV LSFL I SG L AAVLS G FCYA E FGARV P K AG saylysyvtv G EL W afitg W N L 115
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 130 K L A ppkykrfaa Y MC G SF A Y A G S VFTSASTT L SVATE ----- VVGM --- YALTH P E F IP krwh IFVCFE L LH L FLM ffnc 201
Cdd:TIGR00906 116 I L E --------- Y VI G TA A V A R S WSAYFDEL L NKQIG qfrrt YFKL nyd GLAEY P D F FA ---- VCLILL L AV L LSF ---- 178
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 202 ygkslpii SSSSLYISLLS F FT I T I T VL AC shgk FND A K F VF A TFN N ETGWKNG G IA ----- FIV G LINP A ---- WS F SC 272
Cdd:TIGR00906 179 -------- GVKESAWVNKI F TA I N I L VL LF ---- VII A G F TK A DVA N WSITEEK G AG gfmpy GFT G VLSG A atcf FA F IG 246
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 273 L D CATHMAF EV EK P E R V IPI A I MGTVAIG FV TS F CYVI A ---- M FFSIQ D L DA VLSSTTGAPIL D I -- Y NQ A L G NKS G ai 346
Cdd:TIGR00906 247 F D AIATTGE EV KN P Q R A IPI G I VTSLLVC FV AY F LMSA A ltlm M PYYLL D P DA PFPVAFEYVGW D P ak Y IV A V G ALC G -- 324
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 347 f LGCLI L FTS F G cviachtw QA R LCWSF ARD NG L P ls RLWS Q V N PH T GV P L NA HLM S C A WIT L IGL L Y - L ASSTAFQ S LI 425
Cdd:TIGR00906 325 - MSTSL L GGM F P -------- LP R VIYAM ARD GL L F -- KWLA Q I N SK T KT P I NA TVV S G A IAA L MAF L F d L KALVDLL S IG 393
410
....*....|....*....
gi 6321361 426 T gciafl LL S Y IIPVI C L L 444
Cdd:TIGR00906 394 T ------ LL A Y SLVAA C V L 406
2A0310
TIGR00913 amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
76-480
1.05e-03
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273334
Cd Length: 478
Bit Score: 41.89
E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 76 G I S T SMVA G ---- ISS GGP MMIVY G II I VAL I SI C IGT SLGE LSSA YP HAG G Q F - WWSLKLAP P KY krfa AYMC G s FA Y A 150
Cdd:TIGR00913 17 T I G T GLLV G sgta LAT GGP AGLLI G YA I MGS I IY C VMQ SLGE MATF YP VVS G S F a TYASRFVD P AF ---- GFAV G - WN Y W 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 151 GSVFTSASTT L SV A TEVVGMYALTHP efi P KR W - H IF VC F - ELLH LF LMFF nc YG KSLPII SS SSLYISLL sf F T I TITV 228
Cdd:TIGR00913 92 LQWLIVLPLE L VT A SMTIQYWTDKVN --- P AV W i A IF YV F i VIIN LF GVKG -- YG EAEFWF SS IKILAIIG -- F I I LSII 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 229 L A C SH G K f N DAKFV F ATFNNETGWKN G G I ----- AFIVGLINP A W SF SCLDCATHM A F E VEK P ERV IP I A IMG T V aig FV 303
Cdd:TIGR00913 165 L N C GG G P - N HGYIG F RYWHDPGAFAG G T I ggrfk GVCSVFVTA A F SF GGTELVALT A G E AAN P RKS IP R A AKR T F --- WR 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 304 TSFC Y VIAM F F -------- SIQD L DAVL SS TTG A PILD I YN Q AL G N K SGAIFLGCL IL FTSFGCVIACHTWQA R LCWSF A 375
Cdd:TIGR00913 241 ILVF Y ILTL F L igflvpyn DPRL L SSSS SS DSA A SPFV I AI Q NH G I K VLPHIFNAV IL ISVLSAANSSLYASS R TLYAL A 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 376 RDNGL P ls RLWSQ V N p HT GVP LN A HLM S CAW i T L IGL L ------------ Y L AS S TAFQSLITG CI afl L LS Y I IPVICL 443
Cdd:TIGR00913 321 HQGLA P -- KIFAY V D - RR GVP YV A VIV S SLF - G L LAF L avskkeaevftw L L NI S GLSGFFTWM CI --- C LS H I RFRKAM 393
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 6321361 444 L A KK R NIAHG P F ------ WLGKFGF F S NI VL L --- G WTV F SV V F FS 480
Cdd:TIGR00913 394 K A QG R SLDEL P Y ksqtgp YGSYYAL F F NI LI L iaq G YVA F AP V K FS 439
PRK10644
PRK10644 arginine/agmatine antiporter;
268-470
3.22e-03
arginine/agmatine antiporter;
Pssm-ID: 182613 [Multi-domain]
Cd Length: 445
Bit Score: 40.16
E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 268 WSF SCLDC A THM A FE V EK P E R VI PIA IM G T V A I GF V tsf CYV I --- A MFFS I QDLDAVL S S ttg A P IL D IYNQ ALG NKS G 344
Cdd:PRK10644 202 WSF IGVES A SVA A GV V KN P K R NV PIA TI G G V L I AA V --- CYV L sst A IMGM I PNAALRV S A --- S P FG D AARM ALG DTA G 275
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321361 345 AI ----- FL GCL ilf T S F G -- CVI A CH T WQ A rlcwsf A R D N GL p LSRLWSQ VN ---- P HT G VPLNAH LM S caw I TLIGLL 413
Cdd:PRK10644 276 AI vsfca AA GCL --- G S L G gw TLL A GQ T AK A ------ A A D D GL - FPPIFAR VN kagt P VA G LLIVGV LM T --- I FQLSSI 342
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 6321361 414 YLAS S TA F QSLITGCIA F L L LS Y IIPVIC LL A kkrn IA HG P F w LGKFGFFSNIV L LG 470
Cdd:PRK10644 343 SPNA S KE F GLVSSVSVI F T L VP Y LYTCAA LL L ---- LG HG H F - GKARPAYLAVT L IA 394
SLC-NCS1sbd_CobB-like
cd11484 nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain; This NCS1 ...
44-109
5.02e-03
nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain; This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).
Pssm-ID: 271377 [Multi-domain]
Cd Length: 406
Bit Score: 39.52
E-value: 5.02e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6321361 44 GAVA AD GEVHLRK S FSLWSILGV GF GLT NS W --- F G ISTSMVA G ISSGGPM MI VY G II I V A LISICIGT 109
Cdd:cd11484 198 ATYT AD YSRYAKS S KKAFWATFL GF FVG NS L mmi L G ALLAAAT G TADISEV MI AQ G LG I P A ILVLVLNI 266
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
