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Conserved domains on  [gi|398364377|ref|NP_012199|]
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Fis1p [Saccharomyces cerevisiae S288C]

Protein Classification

mitochondrial fission 1 protein( domain architecture ID 10187549)

mitochondrial fission 1 (Fis1) protein is an essential protein in mediating mitochondrial fission, and is involved in the fragmentation of the mitochondrial network and its perinuclear clustering; contains tandem Tetratricopeptide repeat (TPR) motifs which are known to mediate protein-protein interactions

CATH:  1.25.40.10
Gene Ontology:  GO:0000266|GO:0060090|GO:0008289|GO:0005515
PubMed:  30708253|10517866
SCOP:  4001344

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Fis1 cd12212
Mitochondrial Fission Protein Fis1, cytosolic domain; Fis1, along with Dnm1 and Mdv1, is an ...
 16-129 3.08e-52

Mitochondrial Fission Protein Fis1, cytosolic domain; Fis1, along with Dnm1 and Mdv1, is an essential protein in mediating mitochondrial fission. Dnm1 and Fis1 are highly conserved, with a common mechanism in disparate species. In mutants of these proteins, mitochondrial fission is impaired, resulting in networks of undivided mitochondria. The Fis1 N-terminus is cytosolic and tethered to the mitochondrial outer membrane via a C-terminal transmembrane domain. Fis1 appears to act via the recruitment of division complexes to the mitochondrial outer membrane, via interactions with Mdv1 or Caf4. Fis1 has tandem Tetratricopeptide repeat (TPR) motifs which are known to mediate protein-protein interactions.


:

Pssm-ID: 276936 [Multi-domain]  Cd Length: 115  Bit Score: 161.57  E-value: 3.08e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398364377  16 PLYPQQLEILRQQVVSEGGP-TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYS 94
Cdd:cd12212    1 PLSPEELAVLEEQYNSELARgSVSPQTQFNYAWALVKSKNPEDIRRGIELLEELYRDGPERRRECLYYLALGHYKLGEYS 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 398364377  95 MAKRYVDTLFEHERNNKQVGALKSMVEDKIQKETL 129
Cdd:cd12212   81 EARRYVDALLEIEPDNRQALALKELIEDKITKEGL 115
 
Name Accession Description Interval E-value
Fis1 cd12212
Mitochondrial Fission Protein Fis1, cytosolic domain; Fis1, along with Dnm1 and Mdv1, is an ...
 16-129 3.08e-52

Mitochondrial Fission Protein Fis1, cytosolic domain; Fis1, along with Dnm1 and Mdv1, is an essential protein in mediating mitochondrial fission. Dnm1 and Fis1 are highly conserved, with a common mechanism in disparate species. In mutants of these proteins, mitochondrial fission is impaired, resulting in networks of undivided mitochondria. The Fis1 N-terminus is cytosolic and tethered to the mitochondrial outer membrane via a C-terminal transmembrane domain. Fis1 appears to act via the recruitment of division complexes to the mitochondrial outer membrane, via interactions with Mdv1 or Caf4. Fis1 has tandem Tetratricopeptide repeat (TPR) motifs which are known to mediate protein-protein interactions.


Pssm-ID: 276936 [Multi-domain]  Cd Length: 115  Bit Score: 161.57  E-value: 3.08e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398364377  16 PLYPQQLEILRQQVVSEGGP-TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYS 94
Cdd:cd12212    1 PLSPEELAVLEEQYNSELARgSVSPQTQFNYAWALVKSKNPEDIRRGIELLEELYRDGPERRRECLYYLALGHYKLGEYS 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 398364377  95 MAKRYVDTLFEHERNNKQVGALKSMVEDKIQKETL 129
Cdd:cd12212   81 EARRYVDALLEIEPDNRQALALKELIEDKITKEGL 115
Fis1_TPR_C pfam14853
Fis1 C-terminal tetratricopeptide repeat; The mitochondrial fission protein Fis1 consists of ...
 77-129 3.28e-25

Fis1 C-terminal tetratricopeptide repeat; The mitochondrial fission protein Fis1 consists of two tetratricopeptide repeats. This domain is the C-terminal tetratricopeptide repeat


Pssm-ID: 434269 [Multi-domain]  Cd Length: 53  Bit Score: 91.04  E-value: 3.28e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 398364377   77 RECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQKETL 129
Cdd:pfam14853   1 RECLYYLAVGHYKLGEYSEARRYVDALLEIEPDNRQALALKELIEDKITKEGL 53
 
Name Accession Description Interval E-value
Fis1 cd12212
Mitochondrial Fission Protein Fis1, cytosolic domain; Fis1, along with Dnm1 and Mdv1, is an ...
 16-129 3.08e-52

Mitochondrial Fission Protein Fis1, cytosolic domain; Fis1, along with Dnm1 and Mdv1, is an essential protein in mediating mitochondrial fission. Dnm1 and Fis1 are highly conserved, with a common mechanism in disparate species. In mutants of these proteins, mitochondrial fission is impaired, resulting in networks of undivided mitochondria. The Fis1 N-terminus is cytosolic and tethered to the mitochondrial outer membrane via a C-terminal transmembrane domain. Fis1 appears to act via the recruitment of division complexes to the mitochondrial outer membrane, via interactions with Mdv1 or Caf4. Fis1 has tandem Tetratricopeptide repeat (TPR) motifs which are known to mediate protein-protein interactions.


Pssm-ID: 276936 [Multi-domain]  Cd Length: 115  Bit Score: 161.57  E-value: 3.08e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398364377  16 PLYPQQLEILRQQVVSEGGP-TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYS 94
Cdd:cd12212    1 PLSPEELAVLEEQYNSELARgSVSPQTQFNYAWALVKSKNPEDIRRGIELLEELYRDGPERRRECLYYLALGHYKLGEYS 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 398364377  95 MAKRYVDTLFEHERNNKQVGALKSMVEDKIQKETL 129
Cdd:cd12212   81 EARRYVDALLEIEPDNRQALALKELIEDKITKEGL 115
Fis1_TPR_C pfam14853
Fis1 C-terminal tetratricopeptide repeat; The mitochondrial fission protein Fis1 consists of ...
 77-129 3.28e-25

Fis1 C-terminal tetratricopeptide repeat; The mitochondrial fission protein Fis1 consists of two tetratricopeptide repeats. This domain is the C-terminal tetratricopeptide repeat


Pssm-ID: 434269 [Multi-domain]  Cd Length: 53  Bit Score: 91.04  E-value: 3.28e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 398364377   77 RECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQKETL 129
Cdd:pfam14853   1 RECLYYLAVGHYKLGEYSEARRYVDALLEIEPDNRQALALKELIEDKITKEGL 53
Fis1_TPR_N pfam14852
Fis1 N-terminal tetratricopeptide repeat; The mitochondrial fission protein Fis1 consists of ...
 40-71 1.71e-13

Fis1 N-terminal tetratricopeptide repeat; The mitochondrial fission protein Fis1 consists of two tetratricopeptide repeats. This domain is the N-terminal tetratricopeptide repeat


Pssm-ID: 464348  Cd Length: 33  Bit Score: 60.49  E-value: 1.71e-13
                          10        20        30
                  ....*....|....*....|....*....|..
gi 398364377   40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKE 71
Cdd:pfam14852   1 QTKFNYAWALVKSKNRADQQRGIALLEELYRD 32
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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