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Conserved domains on  [gi|6323252|ref|NP_013324|]
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Ifh1p [Saccharomyces cerevisiae S288C]

Protein Classification

CRF1 domain-containing protein( domain architecture ID 10563935)

CRF1 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CRF1 pfam10380
Transcription factor CRF1; CRF1 is a transcription factor that co-represses ribosomal genes ...
 678-788 2.08e-51

Transcription factor CRF1; CRF1 is a transcription factor that co-represses ribosomal genes with FHL1 via the TOR signalling pathway and protein kinase A.


:

Pssm-ID: 371017  Cd Length: 122  Bit Score: 176.50  E-value: 2.08e-51
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323252     678 DESTDEDDNLPPPSSRSKNIGSKAKEIVSSNVVGLRPPKLGTWETDNKPFSIIDGLSTKSLYALIQEHQQLREQHQRAQT 757
Cdd:pfam10380    1 DESTDEDDTLPPPTSRSKEIGTKATEVVSSNVVGLRPPKLGTWKTDNKPFGIIDGLSTKSLYPLIQEHQQLLHHQKFPAT 80

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|..
gi 6323252     758 PDVKREG-----------SSNGNNGDELTLNELLNMSELEDD 788
Cdd:pfam10380   81 TKGENNSnspygpstlneSSSSSDGDELTLDELLNMSELDDD 122
 
Name Accession Description Interval E-value
CRF1 pfam10380
Transcription factor CRF1; CRF1 is a transcription factor that co-represses ribosomal genes ...
 678-788 2.08e-51

Transcription factor CRF1; CRF1 is a transcription factor that co-represses ribosomal genes with FHL1 via the TOR signalling pathway and protein kinase A.


Pssm-ID: 371017  Cd Length: 122  Bit Score: 176.50  E-value: 2.08e-51
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323252     678 DESTDEDDNLPPPSSRSKNIGSKAKEIVSSNVVGLRPPKLGTWETDNKPFSIIDGLSTKSLYALIQEHQQLREQHQRAQT 757
Cdd:pfam10380    1 DESTDEDDTLPPPTSRSKEIGTKATEVVSSNVVGLRPPKLGTWKTDNKPFGIIDGLSTKSLYPLIQEHQQLLHHQKFPAT 80

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|..
gi 6323252     758 PDVKREG-----------SSNGNNGDELTLNELLNMSELEDD 788
Cdd:pfam10380   81 TKGENNSnspygpstlneSSSSSDGDELTLDELLNMSELDDD 122
 
Name Accession Description Interval E-value
CRF1 pfam10380
Transcription factor CRF1; CRF1 is a transcription factor that co-represses ribosomal genes ...
 678-788 2.08e-51

Transcription factor CRF1; CRF1 is a transcription factor that co-represses ribosomal genes with FHL1 via the TOR signalling pathway and protein kinase A.


Pssm-ID: 371017  Cd Length: 122  Bit Score: 176.50  E-value: 2.08e-51
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323252     678 DESTDEDDNLPPPSSRSKNIGSKAKEIVSSNVVGLRPPKLGTWETDNKPFSIIDGLSTKSLYALIQEHQQLREQHQRAQT 757
Cdd:pfam10380    1 DESTDEDDTLPPPTSRSKEIGTKATEVVSSNVVGLRPPKLGTWKTDNKPFGIIDGLSTKSLYPLIQEHQQLLHHQKFPAT 80

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|..
gi 6323252     758 PDVKREG-----------SSNGNNGDELTLNELLNMSELEDD 788
Cdd:pfam10380   81 TKGENNSnspygpstlneSSSSSDGDELTLDELLNMSELDDD 122
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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