|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
65-335 |
8.93e-20 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 89.30 E-value: 8.93e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 65 YSQLGNAYFYLHDYAKALEYHHHDLTLARtigdqlGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELndkvgeARA 144
Cdd:COG0457 11 YNNLGLAYRRLGRYEEAIEDYEKALELDP------DDAEALYNLGLAYLRLGRYEEALADYEQALELDPDD------AEA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 145 LYNLGNVYHAKGKsfgcpgpqdvgefpeevrdaLQAAVDFYEEnlslvtALGDRAAQGRAFGNLGNTHYLLGNFRDAVIA 224
Cdd:COG0457 79 LNNLGLALQALGR--------------------YEEALEDYDK------ALELDPDDAEALYNLGLALLELGRYDEAIEA 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 225 HEQRLLIAKEFGDkaaerrAYSNLGNAYIFLGEFETASEYYKKtlLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDY 304
Cdd:COG0457 133 YERALELDPDDAD------ALYNLGIALEKLGRYEEALELLEK--LEAAALAALLAAALGEAALALAAAEVLLALLLALE 204
|
250 260 270
....*....|....*....|....*....|.
gi 164519122 305 HLKHLAIAQELNDRIGEGRACWSLGNAYTAL 335
Cdd:COG0457 205 QALRKKLAILTLAALAELLLLALALLLALRL 235
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
101-368 |
2.93e-19 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 87.75 E-value: 2.93e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 101 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRElndkvgEARALYNLGNVYHAKGKsfgcpgpqdvgefpeevrdaLQA 180
Cdd:COG0457 7 DAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPD------DAEALYNLGLAYLRLGR--------------------YEE 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 181 AVDFYEEnlslvtALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDkaaerrAYSNLGNAYIFLGEFET 260
Cdd:COG0457 61 ALADYEQ------ALELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAE------ALYNLGLALLELGRYDE 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 261 ASEYYKKTLLLARQLkdraveAQSCYSLGNTYTLLQDYEKAIDYHLKhlAIAQELNDRIGEGRACWSLGNAYTALGNHDQ 340
Cdd:COG0457 129 AIEAYERALELDPDD------ADALYNLGIALEKLGRYEEALELLEK--LEAAALAALLAAALGEAALALAAAEVLLALL 200
|
250 260
....*....|....*....|....*...
gi 164519122 341 AMHFAEKHLEISREVGDKSGELTARLNL 368
Cdd:COG0457 201 LALEQALRKKLAILTLAALAELLLLALA 228
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
67-351 |
2.01e-14 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 74.00 E-value: 2.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 67 QLGNAYFYLHDYAKALEYhhhdltLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRElndkvgEARALY 146
Cdd:COG2956 13 FKGLNYLLNGQPDKAIDL------LEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPD------RAEALL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 147 NLGNVYHAKGKsfgcpgpqdvgefpeevrdaLQAAVDFYEEnlslvtALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHE 226
Cdd:COG2956 81 ELAQDYLKAGL--------------------LDRAEELLEK------LLELDPDDAEALRLLAEIYEQEGDWEKAIEVLE 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 227 QrllIAKEFGDKAaerRAYSNLGNAYIFLGEFETASEYYKKtlllARQLKDRAVEAQscYSLGNTYTLLQDYEKAIdyhl 306
Cdd:COG2956 135 R---LLKLGPENA---HAYCELAELYLEQGDYDEAIEALEK----ALKLDPDCARAL--LLLAELYLEQGDYEEAI---- 198
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 164519122 307 KHLAIAQELNDRIGEGRAcwSLGNAYTALGNHDQAMHFAEKHLEI 351
Cdd:COG2956 199 AALERALEQDPDYLPALP--RLAELYEKLGDPEEALELLRKALEL 241
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
175-329 |
3.85e-12 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 69.89 E-value: 3.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 175 RDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNF-------RDAVIAHEQRLLIAKEFGDKAAERRAYSN 247
Cdd:COG3899 718 RGAYAEALRYLERALELLPPDPEEEYRLALLLELAEALYLAGRFeeaeallERALAARALAALAALRHGNPPASARAYAN 797
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 248 LGnaYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWS 327
Cdd:COG3899 798 LG--LLLLGDYEEAYEFGELALALAERLGDRRLEARALFNLGFILHWLGPLREALELLREALEAGLETGDAALALLALAA 875
|
..
gi 164519122 328 LG 329
Cdd:COG3899 876 AA 877
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
29-350 |
2.00e-11 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 65.14 E-value: 2.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 29 LEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTlsaiYSQLGNAYFYLHDYAKALEYHHHDLTLARTigdqlgEAKASGNL 108
Cdd:COG2956 13 FKGLNYLLNGQPDKAIDLLEEALELDPETVEA----HLALGNLYRRRGEYDRAIRIHQKLLERDPD------RAEALLEL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 109 GNTLKVLGNFDEAIVCCQRHLDISRElndkvgEARALYNLGNVYHAKGKsfgcpgpqdvgefpeevrdaLQAAVDFYEEn 188
Cdd:COG2956 83 AQDYLKAGLLDRAEELLEKLLELDPD------DAEALRLLAEIYEQEGD--------------------WEKAIEVLER- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 189 lslvtALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFgdkaaeRRAYSNLGNAYIFLGEFETASEYYKKT 268
Cdd:COG2956 136 -----LLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDC------ARALLLLAELYLEQGDYEEAIAALERA 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 269 LllarQLKDRAVEAQscYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIgegracwSLGNAYTALGNHDQAMHFAEKH 348
Cdd:COG2956 205 L----EQDPDYLPAL--PRLAELYEKLGDPEEALELLRKALELDPSDDLLL-------ALADLLERKEGLEAALALLERQ 271
|
..
gi 164519122 349 LE 350
Cdd:COG2956 272 LR 273
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
56-274 |
4.48e-11 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 66.17 E-value: 4.48e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 56 EDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTigdqlgEAKASGNLGNTLKVLGNFDEAIVCCQRHLDIsrel 135
Cdd:COG3914 72 AALLLLAALLELAALLLQALGRYEEALALYRRALALNPD------NAEALFNLGNLLLALGRLEEALAALRRALAL---- 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 136 ndKVGEARALYNLGNVYHAKGKsfgcpgpqdvgefPEEVRDALQAAVDFYEENLslvtalgdraaqgRAFGNLGNTHYLL 215
Cdd:COG3914 142 --NPDFAEAYLNLGEALRRLGR-------------LEEAIAALRRALELDPDNA-------------EALNNLGNALQDL 193
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 164519122 216 GNFRDAVIAHEQRLLIAKEFgdkaaeRRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 274
Cdd:COG3914 194 GRLEEAIAAYRRALELDPDN------ADAHSNLLFALRQACDWEVYDRFEELLAALARG 246
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
175-351 |
3.87e-10 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 63.09 E-value: 3.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 175 RDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDkaaerrAYSNLGNAYIF 254
Cdd:COG3914 51 LAEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPDNAE------ALFNLGNLLLA 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 255 LGEFETASEYYKKtlllARQLKDRAVEAqsCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDrigegrACWSLGNAYTA 334
Cdd:COG3914 125 LGRLEEALAALRR----ALALNPDFAEA--YLNLGEALRRLGRLEEAIAALRRALELDPDNAE------ALNNLGNALQD 192
|
170
....*....|....*..
gi 164519122 335 LGNHDQAMHFAEKHLEI 351
Cdd:COG3914 193 LGRLEEAIAAYRRALEL 209
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
199-352 |
3.04e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 55.97 E-value: 3.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 199 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDkaaerrAYSNLGNAYIFLGEFETASEYYKKtlllARQLKDR 278
Cdd:COG4783 1 AACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPE------AFALLGEILLQLGDLDEAIVLLHE----ALELDPD 70
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 164519122 279 AVEAQscYSLGNTYTLLQDYEKAIDYHLKHLAIAQElndrigEGRACWSLGNAYTALGNHDQAMHFAEKHLEIS 352
Cdd:COG4783 71 EPEAR--LNLGLALLKAGDYDEALALLEKALKLDPE------HPEAYLRLARAYRALGRPDEAIAALEKALELD 136
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
243-314 |
3.87e-09 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 53.55 E-value: 3.87e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 164519122 243 RAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 314
Cdd:pfam13424 4 TALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
171-376 |
1.15e-08 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 58.47 E-value: 1.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 171 PEEVRDALQAAVDFYEENLSlvtALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGN 250
Cdd:COG3914 10 AALAAAALLAAAAAAELALA---AELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 251 AYIFLGEFETASEYYKKTLLLARQlkdravEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELndrigeGRACWSLGN 330
Cdd:COG3914 87 LLQALGRYEEALALYRRALALNPD------NAEALFNLGNLLLALGRLEEALAALRRALALNPDF------AEAYLNLGE 154
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 164519122 331 AYTALGNHDQAMHFAEKHLEIsrevgdKSGELTARLNLSDLQMVLG 376
Cdd:COG3914 155 ALRRLGRLEEAIAALRRALEL------DPDNAEALNNLGNALQDLG 194
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
286-354 |
2.66e-08 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 51.23 E-value: 2.66e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 164519122 286 YSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--NDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 354
Cdd:pfam13424 7 NNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
178-312 |
3.47e-08 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 56.93 E-value: 3.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 178 LQAAVDFYEEnlslvtALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDkaaerrAYSNLGNAYIFLGE 257
Cdd:COG3914 94 YEEALALYRR------ALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAE------AYLNLGEALRRLGR 161
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 164519122 258 FETASEYYKKtlllARQLKDRAVEAQscYSLGNTYTLLQDYEKAIDYHLKHLAIA 312
Cdd:COG3914 162 LEEAIAALRR----ALELDPDNAEAL--NNLGNALQDLGRLEEAIAAYRRALELD 210
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
31-245 |
8.89e-08 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 53.86 E-value: 8.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 31 GERLCKSGDCRAGVSFFEAAVQVGTEDlktlSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTigdqlgEAKASGNLGN 110
Cdd:COG0457 49 GLAYLRLGRYEEALADYEQALELDPDD----AEALNNLGLALQALGRYEEALEDYDKALELDPD------DAEALYNLGL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 111 TLKVLGNFDEAIVCCQRHLDISRELndkvgeARALYNLGNVYHAKGKSfgcPGPQDVGEFPEEVRDALQAAVDFYEENLS 190
Cdd:COG0457 119 ALLELGRYDEAIEAYERALELDPDD------ADALYNLGIALEKLGRY---EEALELLEKLEAAALAALLAAALGEAALA 189
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 164519122 191 LVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAY 245
Cdd:COG0457 190 LAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALALYQYR 244
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
78-341 |
1.23e-07 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 55.25 E-value: 1.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 78 YAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYhakgk 157
Cdd:COG3899 728 LERALELLPPDPEEEYRLALLLELAEALYLAGRFEEAEALLERALAARALAALAALRHGNPPASARAYANLGLLL----- 802
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 158 sfgcpgpqdvgefpeevRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD 237
Cdd:COG3899 803 -----------------LGDYEEAYEFGELALALAERLGDRRLEARALFNLGFILHWLGPLREALELLREALEAGLETGD 865
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 238 KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR------QLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 311
Cdd:COG3899 866 AALALLALAAAAAAAAAAAALAAAAAAAARLLAAAAaalaaaAAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAAL 945
|
250 260 270
....*....|....*....|....*....|
gi 164519122 312 AQELNDRIGEGRACWSLGNAYTALGNHDQA 341
Cdd:COG3899 946 AAAAAAAALAAALALAAAAAAAAAAALAAA 975
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
191-304 |
3.01e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 50.00 E-value: 3.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 191 LVTALGDRAAQ----GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDkaaerrAYSNLGNAYIFLGEFETASEYYK 266
Cdd:COG4235 2 AIARLRQALAAnpndAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNAD------ALLDLAEALLAAGDTEEAEELLE 75
|
90 100 110
....*....|....*....|....*....|....*...
gi 164519122 267 KtlllARQLKDRAVEAQscYSLGNTYTLLQDYEKAIDY 304
Cdd:COG4235 76 R----ALALDPDNPEAL--YLLGLAAFQQGDYAEAIAA 107
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
140-314 |
3.90e-07 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 49.81 E-value: 3.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 140 GEARALYNLGNVYHAKGKsfgcpgpqdvgefPEEVRDALQAAVDFYEENLslvtalgdraaqgRAFGNLGNTHYLLGNFR 219
Cdd:COG4783 2 ACAEALYALAQALLLAGD-------------YDEAEALLEKALELDPDNP-------------EAFALLGEILLQLGDLD 55
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 220 DAVIAHEQRLLIAKEfgdkaaERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQlkdravEAQSCYSLGNTYTLLQDYE 299
Cdd:COG4783 56 EAIVLLHEALELDPD------EPEARLNLGLALLKAGDYDEALALLEKALKLDPE------HPEAYLRLARAYRALGRPD 123
|
170
....*....|....*
gi 164519122 300 KAIDYHLKHLAIAQE 314
Cdd:COG4783 124 EAIAALEKALELDPD 138
|
|
| GoLoco |
pfam02188 |
GoLoco motif; |
490-511 |
4.31e-07 |
|
GoLoco motif;
Pssm-ID: 460481 Cd Length: 22 Bit Score: 46.26 E-value: 4.31e-07
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
203-274 |
4.76e-07 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 47.77 E-value: 4.76e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 164519122 203 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 274
Cdd:pfam13424 4 TALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| GoLoco |
smart00390 |
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins |
489-511 |
6.25e-07 |
|
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
Pssm-ID: 214645 Cd Length: 23 Bit Score: 45.96 E-value: 6.25e-07
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
102-187 |
8.08e-07 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 47.00 E-value: 8.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 102 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHAKGKsfgcpgpqdvgefPEEVRDALQ 179
Cdd:pfam13424 3 ATALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGR-------------YEEALELLE 69
|
....*...
gi 164519122 180 AAVDFYEE 187
Cdd:pfam13424 70 RALALAEK 77
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
165-312 |
1.33e-06 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 48.80 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 165 QDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDkaaerrA 244
Cdd:COG5010 17 LTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPE------L 90
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164519122 245 YSNLGNAYIFLGEFETASEYYKKtlllARQLKDRAVEAQscYSLGNTYTLLQDYEKAIDYHLKHLAIA 312
Cdd:COG5010 91 YYNLALLYSRSGDKDEAKEYYEK----ALALSPDNPNAY--SNLAALLLSLGQDDEAKAALQRALGTS 152
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
61-134 |
2.13e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 45.84 E-value: 2.13e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 164519122 61 LSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 134
Cdd:pfam13424 2 VATALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| GoLoco |
smart00390 |
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins |
594-616 |
2.16e-06 |
|
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
Pssm-ID: 214645 Cd Length: 23 Bit Score: 44.41 E-value: 2.16e-06
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
26-157 |
2.50e-06 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 47.49 E-value: 2.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 26 ELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLktlsAIYSQLGNAYFYLHDYAKALEYHHHDLTLARtigdqlGEAKAS 105
Cdd:COG4783 6 ALYALAQALLLAGDYDEAEALLEKALELDPDNP----EAFALLGEILLQLGDLDEAIVLLHEALELDP------DEPEAR 75
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 164519122 106 GNLGNTLKVLGNFDEAIVCCQRHLDISRElndkvgEARALYNLGNVYHAKGK 157
Cdd:COG4783 76 LNLGLALLKAGDYDEALALLEKALKLDPE------HPEAYLRLARAYRALGR 121
|
|
| GoLoco |
pfam02188 |
GoLoco motif; |
629-650 |
4.47e-06 |
|
GoLoco motif;
Pssm-ID: 460481 Cd Length: 22 Bit Score: 43.56 E-value: 4.47e-06
|
| GoLoco |
pfam02188 |
GoLoco motif; |
595-614 |
4.74e-06 |
|
GoLoco motif;
Pssm-ID: 460481 Cd Length: 22 Bit Score: 43.18 E-value: 4.74e-06
|
| GoLoco |
smart00390 |
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins |
628-650 |
8.27e-06 |
|
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
Pssm-ID: 214645 Cd Length: 23 Bit Score: 42.87 E-value: 8.27e-06
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
251-354 |
1.05e-05 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 44.39 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 251 AYIFLGEFETASEYYKKTLLLARQlkdravEAQSCYSLGNTYTLLQDYEKAIDYHLkhlaiAQELNDRIGEgrACWSLGN 330
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPD------NADALNNLGLLLLEQGRYDEAIALEK-----ALKLDPNNAE--ALLNLAE 67
|
90 100
....*....|....*....|....
gi 164519122 331 AYTALGNHDQAMHFAEKHLEISRE 354
Cdd:COG3063 68 LLLELGDYDEALAYLERALELDPS 91
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
243-352 |
1.12e-05 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 45.38 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 243 RAYSNLGNAYIFLGEFETASEYYKKtlllARQLKDRAVEAQscYSLGNTYTLLQDYEKAIdyhlKHLAIAQELNDRigEG 322
Cdd:COG4235 18 EGWLLLGRAYLRLGRYDEALAAYEK----ALRLDPDNADAL--LDLAEALLAAGDTEEAE----ELLERALALDPD--NP 85
|
90 100 110
....*....|....*....|....*....|
gi 164519122 323 RACWSLGNAYTALGNHDQAMHFAEKHLEIS 352
Cdd:COG4235 86 EALYLLGLAAFQQGDYAEAIAAWQKLLALL 115
|
|
| FxSxx_TPR |
NF040586 |
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
88-407 |
1.56e-05 |
|
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids.
Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 48.38 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 88 DLTLARTIGDQLGEA-------------KASGNLGNTLKVLGNFDEAivccqrhldisRELNDKV-GEARALYNLGNVYH 153
Cdd:NF040586 407 DYESARDLAERALERwrerlgpddrqtlRLRFHLANALRSLGRYEEA-----------RELDEDTlERQRRVLGLGEDHP 475
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 154 ----AKGkSFGcpgpQD---VGEFPE---EVRDALQAAVDFYEENlslvtalgDRAAQgRAFGNLGNTHYLLGNFRDAVI 223
Cdd:NF040586 476 htlmTAG-GLG----ADlraLGRFREaleLDEETLERHRRVFGED--------HPRTL-RAANNLAVSLRLLGDYREALE 541
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 224 AHEQRLLIAKE-FG-DKAAERRAYSNLGNAYIFLGEF-------ETASEYYKKTLLLA------RQLKDRAVeaqSCYSL 288
Cdd:NF040586 542 LDREVLRRRRRvLGpDHPRTLLSANNLARDLRELGRYaealdllEEALERYREVLGGPdhpdtlRAAKSLAV---ALRRA 618
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 289 GntytllqDYEKAidyhlkhLAIAQE----LNDRIGEG----RAC-WSLGNAYTALGNHDQAMHFAEKHLEISREVGdks 359
Cdd:NF040586 619 G-------RLEEA-------LELAEDtyerYRRRFGPDhpdtLAAaLSLANDLRALGDADEARELAREVLDRYRRVL--- 681
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 164519122 360 GE-----LTARLNLSDLQMVLGLSYstnnsimsENTEID-SSLNGVRPKLGRRH 407
Cdd:NF040586 682 GEdhpftLACRNNLAVLLRALGDPE--------EARELAeAALEGLRERLGPDH 727
|
|
| GoLoco |
pfam02188 |
GoLoco motif; |
545-566 |
1.64e-05 |
|
GoLoco motif;
Pssm-ID: 460481 Cd Length: 22 Bit Score: 42.02 E-value: 1.64e-05
|
| TPR_7 |
pfam13176 |
Tetratricopeptide repeat; |
284-318 |
1.96e-05 |
|
Tetratricopeptide repeat;
Pssm-ID: 433012 [Multi-domain] Cd Length: 36 Bit Score: 41.76 E-value: 1.96e-05
10 20 30
....*....|....*....|....*....|....*
gi 164519122 284 SCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDR 318
Cdd:pfam13176 1 ALLNLGRIYRKLGDYDEAISLYEQALALAKDPYDR 35
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
248-352 |
2.91e-05 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 46.26 E-value: 2.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 248 LGNAYIFLGEFETASEYYKKTLllarQLKDRAVEAQscYSLGNTYTLLQDYEKAIDYHLKHLAIAQElndrigEGRACWS 327
Cdd:COG2956 14 KGLNYLLNGQPDKAIDLLEEAL----ELDPETVEAH--LALGNLYRRRGEYDRAIRIHQKLLERDPD------RAEALLE 81
|
90 100
....*....|....*....|....*
gi 164519122 328 LGNAYTALGNHDQAMHFAEKHLEIS 352
Cdd:COG2956 82 LAQDYLKAGLLDRAEELLEKLLELD 106
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
173-352 |
3.06e-05 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 45.68 E-value: 3.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 173 EVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAaerRAYSNLGNAY 252
Cdd:COG4785 7 ALLLALALAAAAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRALALPDLA---QLYYERGVAY 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 253 IFLGEFETASEYYKKTLllarQLKDRAVEAQscYSLGNTYTLLQDYEKAIDYhlkhLAIAQELNDRIGEgrACWSLGNAY 332
Cdd:COG4785 84 DSLGDYDLAIADFDQAL----ELDPDLAEAY--NNRGLAYLLLGDYDAALED----FDRALELDPDYAY--AYLNRGIAL 151
|
170 180
....*....|....*....|
gi 164519122 333 TALGNHDQAMHFAEKHLEIS 352
Cdd:COG4785 152 YYLGRYELAIADLEKALELD 171
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
141-324 |
4.62e-05 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 45.29 E-value: 4.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 141 EARALYNLGNVYHAKGKsfgcpgpqdvgefpeevrdaLQAAVDFYEenlslvTALGDRAAQGRAFGNLGNTHYLLGNFRD 220
Cdd:COG4785 72 LAQLYYERGVAYDSLGD--------------------YDLAIADFD------QALELDPDLAEAYNNRGLAYLLLGDYDA 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 221 AVIAheqrlliakeFgDKAAERR-----AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYslgntytLL 295
Cdd:COG4785 126 ALED----------F-DRALELDpdyayAYLNRGIALYYLGRYELAIADLEKALELDPNDPERALWLYLAE-------RK 187
|
170 180
....*....|....*....|....*....
gi 164519122 296 QDYEKAIDYHLKHLAIAQELNDRIGEGRA 324
Cdd:COG4785 188 LDPEKALALLLEDWATAYLLQGDTEEARE 216
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
239-376 |
5.70e-05 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 43.64 E-value: 5.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 239 AAERRAYSNLGNAYIFLGEFETASEYYKKtlllARQLKDRAVEAQscYSLGNTYTLLQDYEKAIDYHLKHLAIAQElndr 318
Cdd:COG4783 1 AACAEALYALAQALLLAGDYDEAEALLEK----ALELDPDNPEAF--ALLGEILLQLGDLDEAIVLLHEALELDPD---- 70
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 164519122 319 igEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDksgeltARLNLSDLQMVLG 376
Cdd:COG4783 71 --EPEARLNLGLALLKAGDYDEALALLEKALKLDPEHPE------AYLRLARAYRALG 120
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
142-234 |
7.03e-05 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 41.60 E-value: 7.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 142 ARALYNLGNVYHAKGKsfgcpgpqdvgefpeevrdaLQAAVDFYEENLSLVTAL--GDRAAQGRAFGNLGNTHYLLGNFR 219
Cdd:pfam13424 3 ATALNNLAAVLRRLGR--------------------YDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYE 62
|
90
....*....|....*
gi 164519122 220 DAVIAHEQRLLIAKE 234
Cdd:pfam13424 63 EALELLERALALAEK 77
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
194-352 |
7.48e-05 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 43.41 E-value: 7.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 194 ALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKtlllAR 273
Cdd:COG5010 6 GFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQ----AL 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 164519122 274 QLKDRAVEAQscYSLGNTYTLLQDYEKAIdyhlKHLAIAQELNDriGEGRACWSLGNAYTALGNHDQAMHFAEKHLEIS 352
Cdd:COG5010 82 QLDPNNPELY--YNLALLYSRSGDKDEAK----EYYEKALALSP--DNPNAYSNLAALLLSLGQDDEAKAALQRALGTS 152
|
|
| GoLoco |
smart00390 |
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins |
544-566 |
7.49e-05 |
|
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
Pssm-ID: 214645 Cd Length: 23 Bit Score: 40.18 E-value: 7.49e-05
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
172-318 |
8.30e-05 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 44.52 E-value: 8.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 172 EEVRDALQAAVDFYEENLSLVTALGDRAaqgRAFGNLGNTHYLLGNFRDAVIAHEQRLliaKEFGDKAaerRAYSNLGNA 251
Cdd:COG4785 46 LALAAAALAAAALAAERIDRALALPDLA---QLYYERGVAYDSLGDYDLAIADFDQAL---ELDPDLA---EAYNNRGLA 116
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 164519122 252 YIFLGEFETASEYYKKTLllarQLKDRAVEAQscYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDR 318
Cdd:COG4785 117 YLLLGDYDAALEDFDRAL----ELDPDYAYAY--LNRGIALYYLGRYELAIADLEKALELDPNDPER 177
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
25-366 |
2.18e-04 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 44.85 E-value: 2.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 25 LELALE-GERLCKSGDCRAGVSFFEAAVQVGT-------EDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 96
Cdd:COG3899 745 LALLLElAEALYLAGRFEEAEALLERALAARAlaalaalRHGNPPASARAYANLGLLLLGDYEEAYEFGELALALAERLG 824
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 97 DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYnlgnvyhakgkSFGCPGPQDVGEFPEEVRD 176
Cdd:COG3899 825 DRRLEARALFNLGFILHWLGPLREALELLREALEAGLETGDAALALLALA-----------AAAAAAAAAAALAAAAAAA 893
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 177 ALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEfgdkAAERRAYSNLGNAYIFLG 256
Cdd:COG3899 894 ARLLAAAAAALAAAAAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAALAAAAAA----AALAAALALAAAAAAAAA 969
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 257 EFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALG 336
Cdd:COG3899 970 AALAAAAAAAAAAAAAAAAAALEAAAAALLALLAAAAAAAAAAAALAAALLAAALAALAAAAAAAALLAAAAALALLAAL 1049
|
330 340 350
....*....|....*....|....*....|
gi 164519122 337 NHDQAMHFAEKHLEISREVGDKSGELTARL 366
Cdd:COG3899 1050 AAAAAAAAAAAALAAAAALLAAAAAAAAAA 1079
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
212-304 |
2.56e-04 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 41.13 E-value: 2.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 212 HYLLGNFRDAVIAHEQrllIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKtllLARQLKDRAVEAQSCYSLGNT 291
Cdd:COG1729 3 LLKAGDYDEAIAAFKA---FLKRYPNSPLAPDALYWLGEAYYALGDYDEAAEAFEK---LLKRYPDSPKAPDALLKLGLS 76
|
90
....*....|...
gi 164519122 292 YTLLQDYEKAIDY 304
Cdd:COG1729 77 YLELGDYDKARAT 89
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
243-274 |
2.93e-04 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 38.56 E-value: 2.93e-04
10 20 30
....*....|....*....|....*....|..
gi 164519122 243 RAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 274
Cdd:pfam00515 2 KALYNLGNAYFKLGKYDEALEYYEKALELNPN 33
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
179-267 |
3.88e-04 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 40.36 E-value: 3.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 179 QAAVDFYEEnlsLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQrllIAKEFGDKAAERRAYSNLGNAYIFLGEF 258
Cdd:COG1729 10 DEAIAAFKA---FLKRYPNSPLAPDALYWLGEAYYALGDYDEAAEAFEK---LLKRYPDSPKAPDALLKLGLSYLELGDY 83
|
....*....
gi 164519122 259 ETASEYYKK 267
Cdd:COG1729 84 DKARATLEE 92
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
57-233 |
3.97e-04 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 41.48 E-value: 3.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 57 DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREln 136
Cdd:COG5010 9 RLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPN-- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 137 dkvgEARALYNLGNVYHAKGKsfgcpgpqdvgefpeevrdaLQAAVDFYEEnlslvtALGDRAAQGRAFGNLGNTHYLLG 216
Cdd:COG5010 87 ----NPELYYNLALLYSRSGD--------------------KDEAKEYYEK------ALALSPDNPNAYSNLAALLLSLG 136
|
170
....*....|....*..
gi 164519122 217 NFRDAVIAHEQRLLIAK 233
Cdd:COG5010 137 QDDEAKAALQRALGTSP 153
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
251-341 |
4.85e-04 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 40.36 E-value: 4.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 251 AYIFLGEFETASEYYKKtllLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKhlaIAQELNDRIGEGRACWSLGN 330
Cdd:COG1729 2 ALLKAGDYDEAIAAFKA---FLKRYPNSPLAPDALYWLGEAYYALGDYDEAAEAFEK---LLKRYPDSPKAPDALLKLGL 75
|
90
....*....|.
gi 164519122 331 AYTALGNHDQA 341
Cdd:COG1729 76 SYLELGDYDKA 86
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
282-314 |
5.20e-04 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 37.81 E-value: 5.20e-04
10 20 30
....*....|....*....|....*....|...
gi 164519122 282 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 314
Cdd:smart00028 1 AEALYNLGNAYLKLGDYDEALEYYEKALELDPN 33
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
102-131 |
6.19e-04 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 37.40 E-value: 6.19e-04
10 20 30
....*....|....*....|....*....|
gi 164519122 102 AKASGNLGNTLKVLGNFDEAIVCCQRHLDI 131
Cdd:pfam00515 1 AKALYNLGNAYFKLGKYDEALEYYEKALEL 30
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
243-274 |
6.52e-04 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 37.43 E-value: 6.52e-04
10 20 30
....*....|....*....|....*....|..
gi 164519122 243 RAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 274
Cdd:smart00028 2 EALYNLGNAYLKLGDYDEALEYYEKALELDPN 33
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
102-134 |
1.11e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 37.04 E-value: 1.11e-03
10 20 30
....*....|....*....|....*....|...
gi 164519122 102 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 134
Cdd:smart00028 1 AEALYNLGNAYLKLGDYDEALEYYEKALELDPN 33
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
61-269 |
1.19e-03 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 41.05 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 61 LSAIYSQLGNAYFYLHDYAKALEyhhhDLTLArtIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLdisrELNDKvg 140
Cdd:COG4785 72 LAQLYYERGVAYDSLGDYDLAIA----DFDQA--LELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRAL----ELDPD-- 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 141 EARALYNLGNVYHAKGKsfgcpgpqdvgefPEEVRDALQAAVDFYEENlslvtalgdraaqgrafgnlgnthyllgnfrd 220
Cdd:COG4785 140 YAYAYLNRGIALYYLGR-------------YELAIADLEKALELDPND-------------------------------- 174
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 164519122 221 aVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTL 269
Cdd:COG4785 175 -PERALWLYLAERKLDPEKALALLLEDWATAYLLQGDTEEARELFKLAL 222
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
142-283 |
1.32e-03 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 39.22 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 142 ARALYNLGNVYHAKGKsfgcpgpqdvgefPEEVRDALQAAVDFYEENLSlvtalgdraaqgrAFGNLGNTHYLLGNFRDA 221
Cdd:COG4235 17 AEGWLLLGRAYLRLGR-------------YDEALAAYEKALRLDPDNAD-------------ALLDLAEALLAAGDTEEA 70
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 164519122 222 VIAHEQRLLIAKEFGdkaaerRAYSNLGNAYIFLGEFETASEYYKKTL-LLARQLKDRAVEAQ 283
Cdd:COG4235 71 EELLERALALDPDNP------EALYLLGLAAFQQGDYAEAIAAWQKLLaLLPADAPARLLEAS 127
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
107-230 |
1.45e-03 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 39.22 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 107 NLGNTLKVLGNFDEAIVCCQRHLDISRElndkvgEARALYNLGNVYHAKGKsfgcpgpqdvgefPEEVRDALQAAVDFYE 186
Cdd:COG4235 22 LLGRAYLRLGRYDEALAAYEKALRLDPD------NADALLDLAEALLAAGD-------------TEEAEELLERALALDP 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 164519122 187 ENLslvtalgdraaqgRAFGNLGNTHYLLGNFRDAvIAHEQRLL 230
Cdd:COG4235 83 DNP-------------EALYLLGLAAFQQGDYAEA-IAAWQKLL 112
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
212-315 |
2.24e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 37.84 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 212 HYLLGNFRDAVIAHEQRLLIAKEFGDkaaerrAYSNLGNAYIFLGEFETASEYYKktlllARQLKDRAVEAQscYSLGNT 291
Cdd:COG3063 2 YLKLGDLEEAEEYYEKALELDPDNAD------ALNNLGLLLLEQGRYDEAIALEK-----ALKLDPNNAEAL--LNLAEL 68
|
90 100
....*....|....*....|....
gi 164519122 292 YTLLQDYEKAIDYHLKHLAIAQEL 315
Cdd:COG3063 69 LLELGDYDEALAYLERALELDPSA 92
|
|
| TPR_7 |
pfam13176 |
Tetratricopeptide repeat; |
244-279 |
2.26e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 433012 [Multi-domain] Cd Length: 36 Bit Score: 35.98 E-value: 2.26e-03
10 20 30
....*....|....*....|....*....|....*.
gi 164519122 244 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 279
Cdd:pfam13176 1 ALLNLGRIYRKLGDYDEAISLYEQALALAKDPYDRE 36
|
|
| TPR_7 |
pfam13176 |
Tetratricopeptide repeat; |
324-359 |
2.33e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 433012 [Multi-domain] Cd Length: 36 Bit Score: 35.98 E-value: 2.33e-03
10 20 30
....*....|....*....|....*....|....*.
gi 164519122 324 ACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKS 359
Cdd:pfam13176 1 ALLNLGRIYRKLGDYDEAISLYEQALALAKDPYDRE 36
|
|
| TPR_11 |
pfam13414 |
TPR repeat; |
109-156 |
2.87e-03 |
|
TPR repeat;
Pssm-ID: 315977 [Multi-domain] Cd Length: 42 Bit Score: 35.91 E-value: 2.87e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 164519122 109 GNTLKVLGNFDEAIVCCQRHLDISRELndkvgeARALYNLGNVYHAKG 156
Cdd:pfam13414 1 GDAYYEQGKYEEAIEAYKKALKLDPDN------PEAYYNLGLAYYKLG 42
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
71-157 |
3.03e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 37.46 E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 71 AYFYLHDYAKALEYHHHDLTLARtigdqlGEAKASGNLGNTLKVLGNFDEAIVcCQRHLDISRElndkvgEARALYNLGN 150
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDP------DNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPN------NAEALLNLAE 67
|
....*..
gi 164519122 151 VYHAKGK 157
Cdd:COG3063 68 LLLELGD 74
|
|
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
70-312 |
3.69e-03 |
|
TPR repeat [General function prediction only];
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 39.53 E-value: 3.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 70 NAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLG----NTLKVLGNFDEAIVCCQRhldiSRELndkvGEARAL 145
Cdd:COG0790 31 AAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGlmyaEGRGVPKDYEKALEWFEK----AAEQ----GDAEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 146 YNLGNVYHakgksFGCPGPQDvgefpeevrdaLQAAVDFYEEnlslVTALGDRAAQgrafgnlgnthYLLGNFRDAVIAH 225
Cdd:COG0790 103 YNLGLMYE-----EGLGVPQD-----------YAKALEWYEK----AAEQGDADAQ-----------YNLGLLYLNGEGV 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 226 EQRLLIAKEFGDKAAER---RAYSNLGNAYiFLGE-----FETASEYYKKtlllARQLKDraveAQSCYSLGNTYT---- 293
Cdd:COG0790 152 PKDPAKAAEWYRKAAEQgdaDAQYNLGVLY-ENGRgvpkdPAKALEWYRK----AAEQGD----ADAQYNLGRLYLngeg 222
|
250
....*....|....*....
gi 164519122 294 LLQDYEKAIDYHLKHLAIA 312
Cdd:COG0790 223 VEKDLEKALRWLRKAAEQA 241
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
282-314 |
3.78e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 35.47 E-value: 3.78e-03
10 20 30
....*....|....*....|....*....|...
gi 164519122 282 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 314
Cdd:pfam00515 1 AKALYNLGNAYFKLGKYDEALEYYEKALELNPN 33
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
178-275 |
5.19e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 36.69 E-value: 5.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164519122 178 LQAAVDFYEENLSLvtalgdRAAQGRAFGNLGNTHYLLGNFRDAvIAHEQRLLIAKEFGDkaaerrAYSNLGNAYIFLGE 257
Cdd:COG3063 8 LEEAEEYYEKALEL------DPDNADALNNLGLLLLEQGRYDEA-IALEKALKLDPNNAE------ALLNLAELLLELGD 74
|
90
....*....|....*...
gi 164519122 258 FETASEYYKKTLLLARQL 275
Cdd:COG3063 75 YDEALAYLERALELDPSA 92
|
|
| TPR_8 |
pfam13181 |
Tetratricopeptide repeat; |
243-267 |
6.42e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 404131 [Multi-domain] Cd Length: 33 Bit Score: 34.68 E-value: 6.42e-03
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
64-94 |
6.98e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 34.73 E-value: 6.98e-03
10 20 30
....*....|....*....|....*....|.
gi 164519122 64 IYSQLGNAYFYLHDYAKALEYHHHDLTLART 94
Cdd:smart00028 3 ALYNLGNAYLKLGDYDEALEYYEKALELDPN 33
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
323-354 |
9.85e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 34.34 E-value: 9.85e-03
10 20 30
....*....|....*....|....*....|..
gi 164519122 323 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 354
Cdd:smart00028 2 EALYNLGNAYLKLGDYDEALEYYEKALELDPN 33
|
|
|