|
Name |
Accession |
Description |
Interval |
E-value |
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
8-388 |
0e+00 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 713.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 8 WDAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPHSRGSSHGQSRIIRKAYLEDFYTRMMHECYQIWAQLEHEAGTQLH 87
Cdd:TIGR01377 1 FDVIVVGAGIMGCFAAYHLAKHGKKTLLLEQFDLPHSRGSSHGQSRIIRKAYPEDFYTPMMLECYQLWAQLEKEAGTKLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 88 RQTGLLLLGMKENQELKTIQANLSRQRVEHQCLSSEELKQRFPNIRLPRGEVGLLDNSGGVIYAYKALRALQDAIRQLGG 167
Cdd:TIGR01377 81 RQTGLLLLGPKENQFLKTIQATLSRHGLEHELLSSKQLKQRFPNIRVPRNEVGLLDPNGGVLYAEKALRALQELAEAHGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 168 IVRDGEKVVEINP-GLLVTVKTTSRSYQAKSLVITAGPWTNQLLRPLGIEMPLQTLRINVCYWREMVPGSYGVSQAFPCF 246
Cdd:TIGR01377 161 TVRDGTKVVEIEPtELLVTVKTTKGSYQANKLVVTAGAWTSKLLSPLGIEIPLQPLRINVCYWREKEPGSYGVSQAFPCF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 247 LWLGLCPhHIYGLPTGEYPGLMKVSYHHGNHADPEERDCPTArTDIGDVQILSSFVRDHLPDLKPEPAVIESCMYTNTPD 326
Cdd:TIGR01377 241 LVLGLNP-HIYGLPSFEYPGLMKVYYHHGQQIDPDERDCPFG-ADIEDVQILRKFVRDHLPGLNGEPKKGEVCMYTNTPD 318
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 60499001 327 EQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMKLTPSYDLAPFRISRFPSLGKA 388
Cdd:TIGR01377 319 EHFVIDLHPKYDNVVIGAGFSGHGFKLAPVVGKILAELAMKLKPSYDLAIFSLNRFALKKKA 380
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
9-382 |
4.47e-106 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 317.16 E-value: 4.47e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPHSRGSSHGQSRIIRKAYLED-FYTRMMHECYQIWAQLEHEAGTQLH 87
Cdd:PRK11259 5 DVIVIGLGSMGSAAGYYLARRGLRVLGLDRFMPPHQQGSSHGDTRIIRHAYGEGpAYVPLVLRAQELWRELERESGEPLF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 88 RQTGLLLLGMKENQELKTIQAnLSRQ-RVEHQCLSSEELKQRFPNIRLPRGEVGLLDNSGGVIYAYKALRALQDAIRQLG 166
Cdd:PRK11259 85 VRTGVLNLGPADSDFLANSIR-SARQhGLPHEVLDAAEIRRRFPQFRLPDGYIALFEPDGGFLRPELAIKAHLRLAREAG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 167 GIVRDGEKVVEINP-GLLVTVKTTSRSYQAKSLVITAGPWTNQLLRPLGIemPLQTLRiNVCYWREMVPGsYGVSQAFPC 245
Cdd:PRK11259 164 AELLFNEPVTAIEAdGDGVTVTTADGTYEAKKLVVSAGAWVKDLLPPLEL--PLTPVR-QVLAWFQADGR-YSEPNRFPA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 246 FLWLGLCPHHIYGLPTGEYPGLmKVSYHHGNHA--DPEERDcPTARTDiGDVQILSSFVRDHLPDLKPePAVIESCMYTN 323
Cdd:PRK11259 240 FIWEVPDGDQYYGFPAENGPGL-KIGKHNGGQEitSPDERD-RFVTVA-EDGAELRPFLRNYLPGVGP-CLRGAACTYTN 315
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 60499001 324 TPDEQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMKLTPSYDLAPFRISRF 382
Cdd:PRK11259 316 TPDEHFIIDTLPGHPNVLVASGCSGHGFKFASVLGEILADLAQDGTSDFDLSPFSLSRF 374
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
9-381 |
4.85e-72 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 229.41 E-value: 4.85e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPhsRGSSHGQSRIIRKAYLED---FYTRMMHECYQIWAQLEHEAGTQ 85
Cdd:COG0665 4 DVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPG--SGASGRNAGQLRPGLAALadrALVRLAREALDLWRELAAELGID 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 86 L-HRQTGLLLLGMKEnQELKTIQANLSRQR---VEHQCLSSEELKQRFPNIRLPRGEVGLLDNSGGVIYAYKALRALQDA 161
Cdd:COG0665 82 CdFRRTGVLYLARTE-AELAALRAEAEALRalgLPVELLDAAELREREPGLGSPDYAGGLYDPDDGHVDPAKLVRALARA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 162 IRQLGGIVRDGEKVVEINP--GLLVTVKTTSRSYQAKSLVITAGPWTNQLLRPLGIEMPLQTLRinvcywremvpGSYGV 239
Cdd:COG0665 161 ARAAGVRIREGTPVTGLERegGRVTGVRTERGTVRADAVVLAAGAWSARLLPMLGLRLPLRPVR-----------GYVLV 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 240 SQAFPCFLWL-GLCPHHIYGLPTGEypGLMKVSYHHgnhadpeERDCPTARTDIGDVQILSSFVRDHLPDLKPEPaVIE- 317
Cdd:COG0665 230 TEPLPDLPLRpVLDDTGVYLRPTAD--GRLLVGGTA-------EPAGFDRAPTPERLEALLRRLRRLFPALADAE-IVRa 299
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 60499001 318 -SCMYTNTPDEQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMKLTPSYDLAPFRISR 381
Cdd:COG0665 300 wAGLRPMTPDGLPIIGRLPGAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPDR 364
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
9-364 |
9.40e-53 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 178.75 E-value: 9.40e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPhSRGSSHGQSRIIR--KAYLEDF-YTRMMHECYQIWAQLEHEAGTQ 85
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDP-GSGASGRNAGLIHpgLRYLEPSeLARLALEALDLWEELEEELGID 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 86 L-HRQTGLLLLGMKENQE-LKTIQANLSRQRVEHQCLSSEELKQRFPNIRLPRGevGLLDNSGGVIYAYKALRALQDAIR 163
Cdd:pfam01266 80 CgFRRCGVLVLARDEEEEaLEKLLAALRRLGVPAELLDAEELRELEPLLPGLRG--GLFYPDGGHVDPARLLRALARAAE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 164 QLGGIVRDGEKVVEINP-GLLVTVKTTSRsyqAKSLVITAGPWTNqLLRPLGIEMPLQTLRINVCywreMVPGSYGVSQA 242
Cdd:pfam01266 158 ALGVRIIEGTEVTGIEEeGGVWGVVTTGE---ADAVVNAAGAWAD-LLALPGLRLPVRPVRGQVL----VLEPLPEALLI 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 243 FPCFLWLgLCPHHIYGLPTGEypGLMKVsyhhGNHADPEERDcpTARTDIGDVQILSSFVRDHLPDLKpEPAVIESCMYT 322
Cdd:pfam01266 230 LPVPITV-DPGRGVYLRPRAD--GRLLL----GGTDEEDGFD--DPTPDPEEIEELLEAARRLFPALA-DIERAWAGLRP 299
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 60499001 323 nTPDEQFILDRhPKYDNIVIGAGFSGHGFKLAPVVGKILYEL 364
Cdd:pfam01266 300 -LPDGLPIIGR-PGSPGLYLATGHGGHGLTLAPGIGKLLAEL 339
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
8-388 |
0e+00 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 713.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 8 WDAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPHSRGSSHGQSRIIRKAYLEDFYTRMMHECYQIWAQLEHEAGTQLH 87
Cdd:TIGR01377 1 FDVIVVGAGIMGCFAAYHLAKHGKKTLLLEQFDLPHSRGSSHGQSRIIRKAYPEDFYTPMMLECYQLWAQLEKEAGTKLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 88 RQTGLLLLGMKENQELKTIQANLSRQRVEHQCLSSEELKQRFPNIRLPRGEVGLLDNSGGVIYAYKALRALQDAIRQLGG 167
Cdd:TIGR01377 81 RQTGLLLLGPKENQFLKTIQATLSRHGLEHELLSSKQLKQRFPNIRVPRNEVGLLDPNGGVLYAEKALRALQELAEAHGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 168 IVRDGEKVVEINP-GLLVTVKTTSRSYQAKSLVITAGPWTNQLLRPLGIEMPLQTLRINVCYWREMVPGSYGVSQAFPCF 246
Cdd:TIGR01377 161 TVRDGTKVVEIEPtELLVTVKTTKGSYQANKLVVTAGAWTSKLLSPLGIEIPLQPLRINVCYWREKEPGSYGVSQAFPCF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 247 LWLGLCPhHIYGLPTGEYPGLMKVSYHHGNHADPEERDCPTArTDIGDVQILSSFVRDHLPDLKPEPAVIESCMYTNTPD 326
Cdd:TIGR01377 241 LVLGLNP-HIYGLPSFEYPGLMKVYYHHGQQIDPDERDCPFG-ADIEDVQILRKFVRDHLPGLNGEPKKGEVCMYTNTPD 318
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 60499001 327 EQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMKLTPSYDLAPFRISRFPSLGKA 388
Cdd:TIGR01377 319 EHFVIDLHPKYDNVVIGAGFSGHGFKLAPVVGKILAELAMKLKPSYDLAIFSLNRFALKKKA 380
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
9-382 |
4.47e-106 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 317.16 E-value: 4.47e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPHSRGSSHGQSRIIRKAYLED-FYTRMMHECYQIWAQLEHEAGTQLH 87
Cdd:PRK11259 5 DVIVIGLGSMGSAAGYYLARRGLRVLGLDRFMPPHQQGSSHGDTRIIRHAYGEGpAYVPLVLRAQELWRELERESGEPLF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 88 RQTGLLLLGMKENQELKTIQAnLSRQ-RVEHQCLSSEELKQRFPNIRLPRGEVGLLDNSGGVIYAYKALRALQDAIRQLG 166
Cdd:PRK11259 85 VRTGVLNLGPADSDFLANSIR-SARQhGLPHEVLDAAEIRRRFPQFRLPDGYIALFEPDGGFLRPELAIKAHLRLAREAG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 167 GIVRDGEKVVEINP-GLLVTVKTTSRSYQAKSLVITAGPWTNQLLRPLGIemPLQTLRiNVCYWREMVPGsYGVSQAFPC 245
Cdd:PRK11259 164 AELLFNEPVTAIEAdGDGVTVTTADGTYEAKKLVVSAGAWVKDLLPPLEL--PLTPVR-QVLAWFQADGR-YSEPNRFPA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 246 FLWLGLCPHHIYGLPTGEYPGLmKVSYHHGNHA--DPEERDcPTARTDiGDVQILSSFVRDHLPDLKPePAVIESCMYTN 323
Cdd:PRK11259 240 FIWEVPDGDQYYGFPAENGPGL-KIGKHNGGQEitSPDERD-RFVTVA-EDGAELRPFLRNYLPGVGP-CLRGAACTYTN 315
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 60499001 324 TPDEQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMKLTPSYDLAPFRISRF 382
Cdd:PRK11259 316 TPDEHFIIDTLPGHPNVLVASGCSGHGFKFASVLGEILADLAQDGTSDFDLSPFSLSRF 374
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
9-381 |
4.85e-72 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 229.41 E-value: 4.85e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPhsRGSSHGQSRIIRKAYLED---FYTRMMHECYQIWAQLEHEAGTQ 85
Cdd:COG0665 4 DVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPG--SGASGRNAGQLRPGLAALadrALVRLAREALDLWRELAAELGID 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 86 L-HRQTGLLLLGMKEnQELKTIQANLSRQR---VEHQCLSSEELKQRFPNIRLPRGEVGLLDNSGGVIYAYKALRALQDA 161
Cdd:COG0665 82 CdFRRTGVLYLARTE-AELAALRAEAEALRalgLPVELLDAAELREREPGLGSPDYAGGLYDPDDGHVDPAKLVRALARA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 162 IRQLGGIVRDGEKVVEINP--GLLVTVKTTSRSYQAKSLVITAGPWTNQLLRPLGIEMPLQTLRinvcywremvpGSYGV 239
Cdd:COG0665 161 ARAAGVRIREGTPVTGLERegGRVTGVRTERGTVRADAVVLAAGAWSARLLPMLGLRLPLRPVR-----------GYVLV 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 240 SQAFPCFLWL-GLCPHHIYGLPTGEypGLMKVSYHHgnhadpeERDCPTARTDIGDVQILSSFVRDHLPDLKPEPaVIE- 317
Cdd:COG0665 230 TEPLPDLPLRpVLDDTGVYLRPTAD--GRLLVGGTA-------EPAGFDRAPTPERLEALLRRLRRLFPALADAE-IVRa 299
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 60499001 318 -SCMYTNTPDEQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMKLTPSYDLAPFRISR 381
Cdd:COG0665 300 wAGLRPMTPDGLPIIGRLPGAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPDR 364
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
9-364 |
9.40e-53 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 178.75 E-value: 9.40e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPhSRGSSHGQSRIIR--KAYLEDF-YTRMMHECYQIWAQLEHEAGTQ 85
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDP-GSGASGRNAGLIHpgLRYLEPSeLARLALEALDLWEELEEELGID 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 86 L-HRQTGLLLLGMKENQE-LKTIQANLSRQRVEHQCLSSEELKQRFPNIRLPRGevGLLDNSGGVIYAYKALRALQDAIR 163
Cdd:pfam01266 80 CgFRRCGVLVLARDEEEEaLEKLLAALRRLGVPAELLDAEELRELEPLLPGLRG--GLFYPDGGHVDPARLLRALARAAE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 164 QLGGIVRDGEKVVEINP-GLLVTVKTTSRsyqAKSLVITAGPWTNqLLRPLGIEMPLQTLRINVCywreMVPGSYGVSQA 242
Cdd:pfam01266 158 ALGVRIIEGTEVTGIEEeGGVWGVVTTGE---ADAVVNAAGAWAD-LLALPGLRLPVRPVRGQVL----VLEPLPEALLI 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 243 FPCFLWLgLCPHHIYGLPTGEypGLMKVsyhhGNHADPEERDcpTARTDIGDVQILSSFVRDHLPDLKpEPAVIESCMYT 322
Cdd:pfam01266 230 LPVPITV-DPGRGVYLRPRAD--GRLLL----GGTDEEDGFD--DPTPDPEEIEELLEAARRLFPALA-DIERAWAGLRP 299
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 60499001 323 nTPDEQFILDRhPKYDNIVIGAGFSGHGFKLAPVVGKILYEL 364
Cdd:pfam01266 300 -LPDGLPIIGR-PGSPGLYLATGHGGHGLTLAPGIGKLLAEL 339
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
9-267 |
3.22e-19 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 88.66 E-value: 3.22e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAK-HRKRILLLEQffLPH-SRGSSHGQSRIIRKAYLEDFYTRMMHECYQIWAQLEHEAgTQL 86
Cdd:COG0579 6 DVVIIGAGIVGLALARELSRyEDLKVLVLEK--EDDvAQESSGNNSGVIHAGLYYTPGSLKARLCVEGNELFYELC-REL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 87 ---HRQTGLLLLGMKENQ--ELKTIQANLSRQRVEH-QCLSSEELKQRFPNIRlPRGEVGLLDNSGGVIYAYKALRALQD 160
Cdd:COG0579 83 gipFKRCGKLVVATGEEEvaFLEKLYERGKANGVPGlEILDREELRELEPLLS-DEGVAALYSPSTGIVDPGALTRALAE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 161 AIRQLGGIVRDGEKVVEINP-GLLVTVKTTSRSYQAKSLVITAGPWTNQLLRPLGIEMPLQtlrinvcywreMVP--GSY 237
Cdd:COG0579 162 NAEANGVELLLNTEVTGIEReGDGWEVTTNGGTIRARFVINAAGLYADRLAQMAGIGKDFG-----------IFPvkGEY 230
|
250 260 270
....*....|....*....|....*....|..
gi 60499001 238 gvsqafpCFLW--LGLCPHHIYGLPTGEYPGL 267
Cdd:COG0579 231 -------LVLDkpAELVNAKVYPVPDPGAPFL 255
|
|
| HpnW_proposed |
TIGR03364 |
FAD dependent oxidoreductase TIGR03364; This clade of FAD dependent oxidoreductases (members ... |
9-203 |
5.50e-10 |
|
FAD dependent oxidoreductase TIGR03364; This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.
Pssm-ID: 132407 [Multi-domain] Cd Length: 365 Bit Score: 60.39 E-value: 5.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAKHRKRILLLEQffLPHSRGSS---HGQSRIIRKAyLEDFYTRMMhECYQIWAQLEHEAGTQ 85
Cdd:TIGR03364 2 DLIIVGAGILGLAHAYAAARRGLSVTVIER--SSRAQGASvrnFGQVWPTGQA-PGPAWDRAR-RSREIWLELAAKAGIW 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 86 LhRQTGLLLLGMKEnQELKTIQANLS-RQRVEHQC--LSSEELKQRFPNIRLPRGEVGLLDNSGGVIYAYKALRALQDAI 162
Cdd:TIGR03364 78 V-RENGSLHLARTE-EELAVLEEFAAtREPAEYRVelLTPAEVAAKFPALRLDGLRGGLHSPDELRVEPREAIPALAAYL 155
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 60499001 163 RQLGGI-VRDGEKVVEINPGllvTVKTTSRSYQAKSLVITAG 203
Cdd:TIGR03364 156 AEQHGVeFHWNTAVTSVETG---TVRTSRGDVHADQVFVCPG 194
|
|
| PRK11728 |
PRK11728 |
L-2-hydroxyglutarate oxidase; |
9-220 |
6.81e-08 |
|
L-2-hydroxyglutarate oxidase;
Pssm-ID: 183292 [Multi-domain] Cd Length: 393 Bit Score: 54.06 E-value: 6.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAK--HRKRILLLEQfflpHSRGSSHgQ----SRIIR----------KAyleDFYTRMMHECY 72
Cdd:PRK11728 4 DFVIIGGGIVGLSTAMQLQEryPGARIAVLEK----ESGPARH-QtghnSGVIHagvyytpgslKA---RFCRRGNEATK 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 73 QIWAQ--LEHEagtqlhrQTGLLLLGMKEnQELKTIQANLSRQR---VEHQCLSSEELKQRFPNIrlpRGEVGLLDNSGG 147
Cdd:PRK11728 76 AFCDQhgIPYE-------ECGKLLVATSE-LELERMEALYERARangIEVERLDAEELREREPNI---RGLGAIFVPSTG 144
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 60499001 148 vIYAYKAL-RALQDAIRQLGGIVRDGEKVVEINP-GLLVTVKTTSRSYQAKSLVITAGPWTNQLLRPLGIEMPLQ 220
Cdd:PRK11728 145 -IVDYRAVaEAMAELIQARGGEIRLGAEVTALDEhANGVVVRTTQGEYEARTLINCAGLMSDRLAKMAGLEPDFR 218
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
9-151 |
2.35e-07 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 52.93 E-value: 2.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPHSRGSSHGQ--------------SRIIRKAYLedfYTRmmhecyQI 74
Cdd:PRK01747 262 DAAIIGGGIAGAALALALARRGWQVTLYEADEAPAQGASGNRQgalypllskddnalSRFFRAAFL---FAR------RF 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 75 WAQLEHEAGTQLHRQTGLLLLGM--KENQEL-KTIQANLSRQRVehQCLSSEELKQRfpnirlprgeVGLLDNSGGVIYA 151
Cdd:PRK01747 333 YDALPAAGVAFDHDWCGVLQLAWdeKSAEKIaKMLALGLPAELA--RALDAEEAEEL----------AGLPVPCGGIFYP 400
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
8-38 |
3.60e-05 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 45.00 E-value: 3.60e-05
10 20 30
....*....|....*....|....*....|.
gi 60499001 8 WDAIVIGAGIQGCFTAYHLAKHRKRILLLEQ 38
Cdd:TIGR02032 1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEK 31
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
12-38 |
7.09e-05 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 40.59 E-value: 7.09e-05
10 20
....*....|....*....|....*..
gi 60499001 12 VIGAGIQGCFTAYHLAKHRKRILLLEQ 38
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEK 27
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
9-38 |
1.40e-03 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 40.55 E-value: 1.40e-03
10 20 30
....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAKHRKRILLLEQ 38
Cdd:COG3573 7 DVIVVGAGLAGLVAAAELADAGRRVLLLDQ 36
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
52-219 |
2.89e-03 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 39.40 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 52 SRIIRKAyledFYTRmmhECYQiwaQLEHEAGTQL-HRQTGLLLLgMKENQELKTIQANLSRQR---VEHQCLSSEELKQ 127
Cdd:PRK00711 106 SRMVRLA----EYSR---DCLK---ALRAETGIQYeGRQGGTLQL-FRTQQQLDAAAKDIAVLEeagVPYELLDRDELAA 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60499001 128 RFP-----------NIRLPRGEVGllDnsggviyAYKALRALQDAIRQLG----------GIVRDGEKVVeinpgllvTV 186
Cdd:PRK00711 175 VEPalagvrhklvgGLRLPNDETG--D-------CQLFTQRLAAMAEQLGvkfrfntpvdGLLVEGGRIT--------GV 237
|
170 180 190
....*....|....*....|....*....|...
gi 60499001 187 KTTSRSYQAKSLVITAGPWTNQLLRPLGIEMPL 219
Cdd:PRK00711 238 QTGGGVITADAYVVALGSYSTALLKPLGVDIPV 270
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
9-36 |
3.60e-03 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 39.32 E-value: 3.60e-03
10 20
....*....|....*....|....*...
gi 60499001 9 DAIVIGAGIQGCFTAYHLAKHrKRILLL 36
Cdd:COG0029 6 DVLVIGSGIAGLSAALKLAER-GRVTLL 32
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
9-38 |
4.25e-03 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 39.11 E-value: 4.25e-03
10 20 30
....*....|....*....|....*....|
gi 60499001 9 DAIVIGAGIQGCFTAYHLAKHRKRILLLEQ 38
Cdd:PRK12834 6 DVIVVGAGLAGLVAAAELADAGKRVLLLDQ 35
|
|
| PTZ00367 |
PTZ00367 |
squalene epoxidase; Provisional |
3-38 |
4.37e-03 |
|
squalene epoxidase; Provisional
Pssm-ID: 240384 [Multi-domain] Cd Length: 567 Bit Score: 39.06 E-value: 4.37e-03
10 20 30
....*....|....*....|....*....|....*.
gi 60499001 3 AQKDlWDAIVIGAGIQGCFTAYHLAKHRKRILLLEQ 38
Cdd:PTZ00367 30 TNYD-YDVIIVGGSIAGPVLAKALSKQGRKVLMLER 64
|
|
| |
