NCBI Conserved Domain Search

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ...

509-749

1.08e-07

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];

Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 55.22 E-value: 1.08e-07

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 509 EDERLRTEDELSKYKEIINRQKAEIQNLLDKVktaDQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESEL 588
Cdd:COG3883  15 DPQIQAKQKELSELQAELEAAQAELDALQAEL---EELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGER 91

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 589 LlfteRLTSKNAQLQS------ESNSLQSQFDKVSCSESQLQSQCEQMKQTNinlesrllkeeeLRKEEVQTLQAELACR 662
Cdd:COG3883  92 A----RALYRSGGSVSyldvllGSESFSDFLDRLSALSKIADADADLLEELK------------ADKAELEAKKAELEAK 155

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 663 QTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQVESGSYDKEVSSMGSRSSSSGSLNARSSAEDRSPE 742
Cdd:COG3883 156 LAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235


                ....*..
gi 36031016 743 NTGSSVA 749
Cdd:COG3883 236 AAAAAAA 242

Name

Accession

Description

Interval

E-value

SMC_prok_B

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

228-574

9.15e-14

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.86 E-value: 9.15e-14

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    228 SEKDNLREElkkrtetekqhmntIKQLESRIEELNKEVKASRDQLiaqdvtakNAVQQLHKEMAQRMEQANKKCEEARQE 307
Cdd:TIGR02168  677 REIEELEEK--------------IEELEEKIAELEKALAELRKEL--------EELEEELEQLRKELEELSRQISALRKD 734

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    308 KEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINS 387
Cdd:TIGR02168  735 LARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTL 814

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    388 HVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNcqdmIKTYQESEEiksneldaklrvtkgELEKQM 467
Cdd:TIGR02168  815 LNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAE----IEELEELIE---------------ELESEL 875

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    468 QEKSDQLEMHHAKIKELEDLKRTFkegMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVK-----T 542
Cdd:TIGR02168  876 EALLNERASLEEALALLRSELEEL---SEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSeeyslT 952

                          330       340       350
                   ....*....|....*....|....*....|..
gi 36031016    543 ADQLQEQLQRGKQEIENLKEEVESLNSLINDL 574
Cdd:TIGR02168  953 LEEAEALENKIEDDEEEARRRLKRLENKIKEL 984

Smc

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

289-616

1.24e-11

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.81 E-value: 1.24e-11

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 289 EMAQRME----QANK-------KCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEK 357
Cdd:COG1196 197 ELERQLEplerQAEKaeryrelKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLEL 276

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 358 GRLHQLYETKEGETTRLIREIDKLKEDINSHvikvkwaqnklkaemdshketKDKLKETTTKLTQAKEEADQIRKNCQDM 437
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARL---------------------EERRRELEERLEELEEELAELEEELEEL 335

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 438 IKTYQESEEiKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTED 517
Cdd:COG1196 336 EEELEELEE-ELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLE 414

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 518 ELSKYKEIINRQKAEIQNLLDKvktADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTS 597
Cdd:COG1196 415 RLERLEEELEELEEALAELEEE---EEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAA 491

                       330
                ....*....|....*....
gi 36031016 598 KNAQLQSESNSLQSQFDKV 616
Cdd:COG1196 492 RLLLLLEAEADYEGFLEGV 510

PRK03918

DNA double-strand break repair ATPase Rad50;

201-710

2.97e-11

DNA double-strand break repair ATPase Rad50;

Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.40 E-value: 2.97e-11

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  201 KYLQQEHIIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVTAK 280
Cdd:PRK03918 183 KFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIR 262

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  281 NAVQQLhKEMAQRMEQANKKCEEArQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRL 360
Cdd:PRK03918 263 ELEERI-EELKKEIEELEEKVKEL-KELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERL 340

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  361 HQLYETKEG---------ETTRLIREIDKLKEDINSHVIKVK-WAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQI 430
Cdd:PRK03918 341 EELKKKLKElekrleeleERHELYEEAKAKKEELERLKKRLTgLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKE 420

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  431 RKNCQDMIKTYQ-----------ESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLK------RTFKE 493
Cdd:PRK03918 421 IKELKKAIEELKkakgkcpvcgrELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLkkeselIKLKE 500

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  494 GMDELRTLRTKVKCLEDERL-RTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLIN 572
Cdd:PRK03918 501 LAEQLKELEEKLKKYNLEELeKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELE 580

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  573 DLQ-KDIEGSRKRESELLLFTER-LTSKNA--QLQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEELR 648
Cdd:PRK03918 581 ELGfESVEELEERLKELEPFYNEyLELKDAekELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEE 660

                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 36031016  649 KEEVQTLQAELacrQTEVKALSTQVEELKDelvtQRRKHASSIKDLTKQLQQARRKLDQVES 710
Cdd:PRK03918 661 YEELREEYLEL---SRELAGLRAELEELEK----RREEIKKTLEKLKEELEEREKAKKELEK 715

CwlO1

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ...

509-749

1.08e-07

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];

Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 55.22 E-value: 1.08e-07

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 509 EDERLRTEDELSKYKEIINRQKAEIQNLLDKVktaDQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESEL 588
Cdd:COG3883  15 DPQIQAKQKELSELQAELEAAQAELDALQAEL---EELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGER 91

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 589 LlfteRLTSKNAQLQS------ESNSLQSQFDKVSCSESQLQSQCEQMKQTNinlesrllkeeeLRKEEVQTLQAELACR 662
Cdd:COG3883  92 A----RALYRSGGSVSyldvllGSESFSDFLDRLSALSKIADADADLLEELK------------ADKAELEAKKAELEAK 155

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 663 QTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQVESGSYDKEVSSMGSRSSSSGSLNARSSAEDRSPE 742
Cdd:COG3883 156 LAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235


                ....*..
gi 36031016 743 NTGSSVA 749
Cdd:COG3883 236 AAAAAAA 242

CCDC158

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...

251-710

8.76e-07

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.

Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 52.81 E-value: 8.76e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    251 IKQLESRIEELNKEVKASRDQLIAQDVTAKNAVQQLHKEMAQRMEQAnkkCEEARQEKEAMVMKYVRGEKESLDLRKEKE 330
Cdd:pfam15921  226 LRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQL---ISEHEVEITGLTEKASSARSQANSIQSQLE 302

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    331 TLEKKLRDAN----KELEKNTNKIKQLSQEKGRLHQLYETKegettrlIREIDKLKEDINSHVIKVKWAQNKLKAEMDSH 406
Cdd:pfam15921  303 IIQEQARNQNsmymRQLSDLESTVSQLRSELREAKRMYEDK-------IEELEKQLVLANSELTEARTERDQFSQESGNL 375

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    407 KETKDKL--------KETTTKLTQAKEEADQIRKN--CQDMIKTYQESEEIKSNELDAKLRVTK----GELEKQM---QE 469
Cdd:pfam15921  376 DDQLQKLladlhkreKELSLEKEQNKRLWDRDTGNsiTIDHLRRELDDRNMEVQRLEALLKAMKsecqGQMERQMaaiQG 455

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    470 KSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQ 549
Cdd:pfam15921  456 KNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQH 535

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    550 LQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTER-------LTSKNAQLQSESNSLQSQF-------DK 615
Cdd:pfam15921  536 LKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQhgrtagaMQVEKAQLEKEINDRRLELqefkilkDK 615

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    616 VSCSESQLQ---SQCEQMKQTNINLESRLLKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKDELVTQRRKHASSIK 692
Cdd:pfam15921  616 KDAKIRELEarvSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTN 695

                          490
                   ....*....|....*...
gi 36031016    693 DLTKQLQQARRKLDQVES 710
Cdd:pfam15921  696 KLKMQLKSAQSELEQTRN 713

SMC_prok_A

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...

443-799

5.95e-06

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]

Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.45 E-value: 5.95e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    443 ESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKY 522
Cdd:TIGR02169  684 EGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKEL 763

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    523 KEIINRQKAEIQNLLDKVKT--ADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEgsrkreselllfteRLTSKNA 600
Cdd:TIGR02169  764 EARIEELEEDLHKLEEALNDleARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLN--------------RLTLEKE 829

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    601 QLQSESNSLQSQFDKVscsESQLQSQCEQMKQTNINLESrllkeeelrkeeVQtlqAELACRQTEVKALSTQVEELKDEl 680
Cdd:TIGR02169  830 YLEKEIQELQEQRIDL---KEQIKSIEKEIENLNGKKEE------------LE---EELEELEAALRDLESRLGDLKKE- 890

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    681 vtqrrkhassIKDLTKQLQQARRKLDQVESGSYDKEVSSMGSRSSSSGSLNARSSAEDRSPENTGSSVAVDNFPQVdKAM 760
Cdd:TIGR02169  891 ----------RDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDV-QAE 959

                          330       340       350
                   ....*....|....*....|....*....|....*....
gi 36031016    761 LIERIVRLQKAHARKNEKIEFMEDHIKQLVEEIRKKTKI 799
Cdd:TIGR02169  960 LQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKL 998

MARTX_Nterm

NF012221

MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ...

204-435

2.71e-05

MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.

Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 48.29 E-value: 2.71e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   204 QQEHIIKKLIKENKKHQELFVDicSEKdnlREELKKRTETEKQHM-----NTIKQLESRIEE-LNKEVKASRDQLIAQdv 277
Cdd:NF012221 1542 QQADAVSKHAKQDDAAQNALAD--KER---AEADRQRLEQEKQQQlaaisGSQSQLESTDQNaLETNGQAQRDAILEE-- 1614

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   278 taKNAVQQLHKEMAQRME----QANKKCEEARQEKEAMVMKYVRGEKESLDlrKEKETLEKKLRDANKELEKNTNKIKQ- 352
Cdd:NF012221 1615 --SRAVTKELTTLAQGLDaldsQATYAGESGDQWRNPFAGGLLDRVQEQLD--DAKKISGKQLADAKQRHVDNQQKVKDa 1690

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   353 LSQEKGRLHQLYETKEGETTRlireIDKLKEDINSH----VIKVKWAQnklKAEMDSHKETKDKLKETTTKLTQAKEEAD 428
Cdd:NF012221 1691 VAKSEAGVAQGEQNQANAEQD----IDDAKADAEKRkddaLAKQNEAQ---QAESDANAAANDAQSRGEQDASAAENKAN 1763


                  ....*..
gi 36031016   429 QIRKNCQ 435
Cdd:NF012221 1764 QAQADAK 1770

PspC_subgroup_1

NF033838

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...

242-563

5.10e-04

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.

Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 43.85 E-value: 5.10e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  242 ETEKQHMNTIKQ-LESRIEELNKEVKASRDqliAQDVTAKNAVQQLHKEMAQRMEQANKKCE-----EARQEKEAMVMKY 315
Cdd:NF033838  54 ESQKEHAKEVEShLEKILSEIQKSLDKRKH---TQNVALNKKLSDIKTEYLYELNVLKEKSEaeltsKTKKELDAAFEQF 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  316 ----VRGEKESLDLRKEKETLEKKLRDANKELEKN--TNKIKQLSQEKGRLHqlYETKEGETtrlirEIDKLKEDINSHV 389
Cdd:NF033838 131 kkdtLEPGKKVAEATKKVEEAEKKAKDQKEEDRRNypTNTYKTLELEIAESD--VEVKKAEL-----ELVKEEAKEPRDE 203

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  390 IKVKWAqnklKAEMDSHKETKDKLKETTTKLTQAKEEADQIrknCQDMIKTYQESEEIKSNELDAKLRVTKGEL------ 463
Cdd:NF033838 204 EKIKQA----KAKVESKKAEATRLEKIKTDREKAEEEAKRR---ADAKLKEAVEKNVATSEQDKPKRRAKRGVLgepatp 276

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  464 --------------------------EKQMQEKSDQLEMHHAKIKELEDLKR------TFKEGMDELRTLRTKVKCLEDE 511
Cdd:NF033838 277 dkkendakssdssvgeetlpspslkpEKKVAEAEKKVEEAKKKAKDQKEEDRrnyptnTYKTLELEIAESDVKVKEAELE 356

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 36031016  512 RLRTEDELSKYKEIINRQKAEIQN------LLDKVKT-ADQLQEQLQRGKQEIENLKEE 563
Cdd:NF033838 357 LVKEEAKEPRNEEKIKQAKAKVESkkaeatRLEKIKTdRKKAEEEAKRKAAEEDKVKEK 415

CCDC158

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...

391-771

5.41e-04

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.

Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 43.95 E-value: 5.41e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    391 KVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEiksnELDAKLRVTKGELEKQMQEK 470
Cdd:pfam15921   86 QVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQE----DLRNQLQNTVHELEAAKCLK 161

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    471 SDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKY---------KEIINRQKAEIQNLLDKV- 540
Cdd:pfam15921  162 EDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMhfrslgsaiSKILRELDTEISYLKGRIf 241

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    541 KTADQLQEQLQRGKQEIE-NLKEEVESLNSLINDLQKDIEGsrkreselllfterLTSKNAQLQSESNSLQSQFDKVScs 619
Cdd:pfam15921  242 PVEDQLEALKSESQNKIElLLQQHQDRIEQLISEHEVEITG--------------LTEKASSARSQANSIQSQLEIIQ-- 305

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    620 esqlqsqcEQMKQTNinlesrllkeeelrkeevqtlqaelACRQTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQ-- 697
Cdd:pfam15921  306 --------EQARNQN-------------------------SMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQlv 352

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    698 -----LQQARRKLDQV--ESGSYDKEVSSMGSRSSSSGSLNARSSAEDRS--PENTGSSVAVDNFPQV--DKAMLIERIV 766
Cdd:pfam15921  353 lanseLTEARTERDQFsqESGNLDDQLQKLLADLHKREKELSLEKEQNKRlwDRDTGNSITIDHLRREldDRNMEVQRLE 432


                   ....*
gi 36031016    767 RLQKA 771
Cdd:pfam15921  433 ALLKA 437

PRK11281

mechanosensitive channel MscK;

517-710

9.50e-04

mechanosensitive channel MscK;

Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.98 E-value: 9.50e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   517 DELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRG---KQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTE 593
Cdd:PRK11281   46 DALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETeqlKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLSLRQ 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   594 ---RLTSKNAQLQ------SESNS----LQSQFDKVscsESQLQSQCEQMKQTNINLESRLLKEEELRKEEVQTLQAELA 660
Cdd:PRK11281  126 lesRLAQTLDQLQnaqndlAEYNSqlvsLQTQPERA---QAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQA 202

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 36031016   661 C-------RQTEVKAlSTQVEEL----KDELVTQRRKHASSIKDL-----TKQLQQARRKLDQVES 710
Cdd:PRK11281  203 LlnaqndlQRKSLEG-NTQLQDLlqkqRDYLTARIQRLEHQLQLLqeainSKRLTLSEKTVQEAQS 267

Spc7

smart00787

Spc7 kinetochore protein; This domain is found in cell division proteins which are required ...

467-607

3.30e-03

Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.

Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 40.77 E-value: 3.30e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    467 MQEKSDQLEMHHAKIKEL-EDLKRTFKEGMDELRTLRTKVKCLEDERlrtEDELSKYKEIINRQKAEIQNLLDKVktaDQ 545
Cdd:smart00787 156 LKEDYKLLMKELELLNSIkPKLRDRKDALEEELRQLKQLEDELEDCD---PTELDRAKEKLKKLLQEIMIKVKKL---EE 229

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 36031016    546 LQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRK-RESELllftERLTSKNAQLQSESN 607
Cdd:smart00787 230 LEEELQELESKIEDLTNKKSELNTEIAEAEKKLEQCRGfTFKEI----EKLKEQLKLLQSLTG 288

ClyA_Cry6Aa-like

cd22656

Bacillus thuringiensis crystal 6Aa (Cry6Aa) toxin, and similar proteins; This model includes ...

421-575

9.02e-03

Bacillus thuringiensis crystal 6Aa (Cry6Aa) toxin, and similar proteins; This model includes pesticidal Cry6Aa toxin from Bacillus thuringiensis, one of the many parasporal crystal (Cry) toxins produced during the sporulation phase of growth. Many of these proteins are toxic to numerous insect species and have been effectively used as proteinaceous insecticides to directly kill insect pests; some have been used to control insect growth on transgenic agricultural plants. Cry6Aa exists as a protoxin, which is activated by cleavage using trypsin. Structure studies for Cry6Aa support a mechanism of action by pore formation, similar to cytolysin A (ClyA)-type alpha pore-forming toxins (alpha-PFTs) such as HblB, and bioassay and mutation studies show that Cry6Aa is an active pore-forming toxin. Cry6Aa shows atypical features compared to other members of alpha-PFTs, including internal repeat sequences and small loop regions within major alpha helices.

Pssm-ID: 439154 [Multi-domain] Cd Length: 309 Bit Score: 39.28 E-value: 9.02e-03

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 421 TQAKEEADQIRKNCQDMIKtyQESEEIKSNELDAKLRVTK-GELEKQMQEKSDQLEMHHAKIKEL--EDLKRTFKEGMDE 497
Cdd:cd22656 106 ATDDEELEEAKKTIKALLD--DLLKEAKKYQDKAAKVVDKlTDFENQTEKDQTALETLEKALKDLltDEGGAIARKEIKD 183

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 36031016 498 LRtlrtkvKCLEDERlrtEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQ 575
Cdd:cd22656 184 LQ------KELEKLN---EEYAAKLKAKIDELKALIADDEAKLAAALRLIADLTAADTDLDNLLALIGPAIPALEKLQ 252

Name

Accession

Description

Interval

E-value

SMC_prok_B

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

228-574

9.15e-14

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.86 E-value: 9.15e-14

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    228 SEKDNLREElkkrtetekqhmntIKQLESRIEELNKEVKASRDQLiaqdvtakNAVQQLHKEMAQRMEQANKKCEEARQE 307
Cdd:TIGR02168  677 REIEELEEK--------------IEELEEKIAELEKALAELRKEL--------EELEEELEQLRKELEELSRQISALRKD 734

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    308 KEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINS 387
Cdd:TIGR02168  735 LARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTL 814

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    388 HVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNcqdmIKTYQESEEiksneldaklrvtkgELEKQM 467
Cdd:TIGR02168  815 LNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAE----IEELEELIE---------------ELESEL 875

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    468 QEKSDQLEMHHAKIKELEDLKRTFkegMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVK-----T 542
Cdd:TIGR02168  876 EALLNERASLEEALALLRSELEEL---SEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSeeyslT 952

                          330       340       350
                   ....*....|....*....|....*....|..
gi 36031016    543 ADQLQEQLQRGKQEIENLKEEVESLNSLINDL 574
Cdd:TIGR02168  953 LEEAEALENKIEDDEEEARRRLKRLENKIKEL 984

SMC_prok_B

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

198-808

4.36e-12

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.47 E-value: 4.36e-12

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    198 VQDKYLQQEHIIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQL----- 272
Cdd:TIGR02168  244 LQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLeelea 323

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    273 -IAQDVTAKNAVQQLHKEMAQRMEQANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKI- 350
Cdd:TIGR02168  324 qLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIe 403

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    351 ---KQLSQEKGRLHQLYETKEGETTRLIR-EIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEE 426
Cdd:TIGR02168  404 rleARLERLEDRRERLQQEIEELLKKLEEaELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERE 483

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    427 ADQIR---KNCQDMIKTYQESEEIKSNELDAK-------------LRVTKG---ELEKQMQEKSDQLEMHHAK------- 480
Cdd:TIGR02168  484 LAQLQarlDSLERLQENLEGFSEGVKALLKNQsglsgilgvlselISVDEGyeaAIEAALGGRLQAVVVENLNaakkaia 563

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    481 -IKELEDLKRTFKE----GMDELRTLRTKVKCLEDERLRTEDELSKYKEIInrqKAEIQNLLDKVKTADQLQEQLQRGK- 554
Cdd:TIGR02168  564 fLKQNELGRVTFLPldsiKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKL---RKALSYLLGGVLVVDDLDNALELAKk 640

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    555 ------------------------------------QEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSK 598
Cdd:TIGR02168  641 lrpgyrivtldgdlvrpggvitggsaktnssilerrREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKE 720

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    599 NAQLQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLEsrllKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKD 678
Cdd:TIGR02168  721 LEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE----AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKE 796

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    679 ELVTQRRKHAS---SIKDLTKQLQQARRKLDQVESGSYDKE-----VSSMGSRSSSSGSLNARSSAEDRSPENTGSSVAV 750
Cdd:TIGR02168  797 ELKALREALDElraELTLLNEEAANLRERLESLERRIAATErrledLEEQIEELSEDIESLAAEIEELEELIEELESELE 876

                          650       660       670       680       690
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 36031016    751 DNfpQVDKAMLIERIVRLQKAHARKNEKIEFMEDHIKQLVEEIRKKTKIIQSYILREE 808
Cdd:TIGR02168  877 AL--LNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLE 932

SMC_prok_B

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

292-639

6.50e-12

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 69.70 E-value: 6.50e-12

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    292 QRMEQANKKCEEARQ--EKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKN--TNKIKQLSQEKGRLHQLYETK 367
Cdd:TIGR02168  172 ERRKETERKLERTREnlDRLEDILNELERQLKSLERQAEKAERYKELKAELRELELAllVLRLEELREELEELQEELKEA 251

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    368 EGETTRLIREIDKLKEDINSHvikvKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEI 447
Cdd:TIGR02168  252 EEELEELTAELQELEEKLEEL----RLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEE 327

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    448 KSNELDAKLrvtkgELEKQMQEKSDQLEmhhakiKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIIN 527
Cdd:TIGR02168  328 LESKLDELA-----EELAELEEKLEELK------EELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA 396

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    528 RQKAEIQNLLDKVKtadQLQEQLQRGKQEIENLKEEVESLNslINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSESN 607
Cdd:TIGR02168  397 SLNNEIERLEARLE---RLEDRRERLQQEIEELLKKLEEAE--LKELQAELEELEEELEELQEELERLEEALEELREELE 471

                          330       340       350
                   ....*....|....*....|....*....|..
gi 36031016    608 SLQSQFDKVSCSESQLQSQCEQMKQTNINLES 639
Cdd:TIGR02168  472 EAEQALDAAERELAQLQARLDSLERLQENLEG 503

Smc

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

289-616

1.24e-11

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.81 E-value: 1.24e-11

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 289 EMAQRME----QANK-------KCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEK 357
Cdd:COG1196 197 ELERQLEplerQAEKaeryrelKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLEL 276

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 358 GRLHQLYETKEGETTRLIREIDKLKEDINSHvikvkwaqnklkaemdshketKDKLKETTTKLTQAKEEADQIRKNCQDM 437
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARL---------------------EERRRELEERLEELEEELAELEEELEEL 335

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 438 IKTYQESEEiKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTED 517
Cdd:COG1196 336 EEELEELEE-ELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLE 414

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 518 ELSKYKEIINRQKAEIQNLLDKvktADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTS 597
Cdd:COG1196 415 RLERLEEELEELEEALAELEEE---EEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAA 491

                       330
                ....*....|....*....
gi 36031016 598 KNAQLQSESNSLQSQFDKV 616
Cdd:COG1196 492 RLLLLLEAEADYEGFLEGV 510

PRK03918

DNA double-strand break repair ATPase Rad50;

201-710

2.97e-11

DNA double-strand break repair ATPase Rad50;

Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.40 E-value: 2.97e-11

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  201 KYLQQEHIIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVTAK 280
Cdd:PRK03918 183 KFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIR 262

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  281 NAVQQLhKEMAQRMEQANKKCEEArQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRL 360
Cdd:PRK03918 263 ELEERI-EELKKEIEELEEKVKEL-KELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERL 340

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  361 HQLYETKEG---------ETTRLIREIDKLKEDINSHVIKVK-WAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQI 430
Cdd:PRK03918 341 EELKKKLKElekrleeleERHELYEEAKAKKEELERLKKRLTgLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKE 420

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  431 RKNCQDMIKTYQ-----------ESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLK------RTFKE 493
Cdd:PRK03918 421 IKELKKAIEELKkakgkcpvcgrELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLkkeselIKLKE 500

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  494 GMDELRTLRTKVKCLEDERL-RTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLIN 572
Cdd:PRK03918 501 LAEQLKELEEKLKKYNLEELeKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELE 580

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  573 DLQ-KDIEGSRKRESELLLFTER-LTSKNA--QLQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEELR 648
Cdd:PRK03918 581 ELGfESVEELEERLKELEPFYNEyLELKDAekELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEE 660

                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 36031016  649 KEEVQTLQAELacrQTEVKALSTQVEELKDelvtQRRKHASSIKDLTKQLQQARRKLDQVES 710
Cdd:PRK03918 661 YEELREEYLEL---SRELAGLRAELEELEK----RREEIKKTLEKLKEELEEREKAKKELEK 715

SMC_prok_B

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

407-710

5.49e-11

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 66.62 E-value: 5.49e-11

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    407 KETKDKLKET-----TTKLTQAKEEADQIRKNCQDMIKTYQESEEiKSNELDAKL---RVTKGELEKQMQEKSDQLEMHH 478
Cdd:TIGR02168  216 KELKAELRELelallVLRLEELREELEELQEELKEAEEELEELTA-ELQELEEKLeelRLEVSELEEEIEELQKELYALA 294

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    479 AKIKELEDLKRTFKEgmdELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQnlldkvktadQLQEQLQRGKQEIE 558
Cdd:TIGR02168  295 NEISRLEQQKQILRE---RLANLERQLEELEAQLEELESKLDELAEELAELEEKLE----------ELKEELESLEAELE 361

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    559 NLKEEVESLNSLINDLQKDIEGSRKRESELLLfterltsknaQLQSESNSLQSQFDKVSCSESQLQSQCEQMKQtniNLE 638
Cdd:TIGR02168  362 ELEAELEELESRLEELEEQLETLRSKVAQLEL----------QIASLNNEIERLEARLERLEDRRERLQQEIEE---LLK 428

                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 36031016    639 SRLLKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKDELVTQRRKhassIKDLTKQLQQARRKLDQVES 710
Cdd:TIGR02168  429 KLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQA----LDAAERELAQLQARLDSLER 496

PTZ00121

MAEBL; Provisional

228-694

6.19e-11

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 66.70 E-value: 6.19e-11

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   228 SEKDNLREELKKRTETEKQHMNTIKQLES---RIEELNKEVKASRDQLIAQDVTAKNAVQQLHK-------------EMA 291
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEAKKADEAKKKAEEakkKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAaeekaeaaekkkeEAK 1377

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   292 QRMEQANKKCEEARQEKEAmvMKYVRGEKESLDLRKEKETLEKKLRDANKELE--KNTNKIKQLSQEKGRLHQLyeTKEG 369
Cdd:PTZ00121 1378 KKADAAKKKAEEKKKADEA--KKKAEEDKKKADELKKAAAAKKKADEAKKKAEekKKADEAKKKAEEAKKADEA--KKKA 1453

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   370 ETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLK-ETTTKLTQAKEEADQIRKNCQ----DMIKTYQES 444
Cdd:PTZ00121 1454 EEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKaDEAKKAAEAKKKADEAKKAEEakkaDEAKKAEEA 1533

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   445 ----------EEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLR 514
Cdd:PTZ00121 1534 kkadeakkaeEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAK 1613

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   515 TEDE-------LSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKREsE 587
Cdd:PTZ00121 1614 KAEEakikaeeLKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAA-E 1692

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   588 LLLFTERLTSKNAQLQSESNSLQSQFDKVSCSESQLQSQCEQMKQT--NINLESRLLKEEELRKEEVQTLQAELACRQTE 665
Cdd:PTZ00121 1693 ALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEaeEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEE 1772

                         490       500       510
                  ....*....|....*....|....*....|.
gi 36031016   666 VKALSTQV--EELKDELVTQRRKHASSIKDL 694
Cdd:PTZ00121 1773 IRKEKEAVieEELDEEDEKRRMEVDKKIKDI 1803

Smc

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

407-740

1.73e-10

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.96 E-value: 1.73e-10

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 407 KETKDKLKETTTKLTQAKEEADQIRKNCQDMIK---------TYQESEEIKSNEL----DAKLRVTKGELEKQMQEKSDQ 473
Cdd:COG1196 175 EEAERKLEATEENLERLEDILGELERQLEPLERqaekaeryrELKEELKELEAELlllkLRELEAELEELEAELEELEAE 254

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 474 LEMHHAKIKELEDLKRTFKEgmdELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDkvkTADQLQEQLQRG 553
Cdd:COG1196 255 LEELEAELAELEAELEELRL---ELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEE---RLEELEEELAEL 328

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 554 KQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSESNSLQSQfdkvscsESQLQSQCEQMKQT 633
Cdd:COG1196 329 EEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEE-------LLEALRAAAELAAQ 401

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 634 NINLESRLLKEEELRKEEVQTLQAELAcRQTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQVESGSY 713
Cdd:COG1196 402 LEELEEAEEALLERLERLEEELEELEE-ALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALA 480

                       330       340
                ....*....|....*....|....*..
gi 36031016 714 DKEVSSMGSRSSSSGSLNARSSAEDRS 740
Cdd:COG1196 481 ELLEELAEAAARLLLLLEAEADYEGFL 507

SMC_prok_B

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

407-710

2.83e-10

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 64.31 E-value: 2.83e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    407 KETKDKLKETTTKLTQAKEEADQIRKNCQDM---IKTYQESEEIKSNELDAKLRVTKG---ELEKQMQEKSDQLEMHHAK 480
Cdd:TIGR02168  175 KETERKLERTRENLDRLEDILNELERQLKSLerqAEKAERYKELKAELRELELALLVLrleELREELEELQEELKEAEEE 254

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    481 IKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKV-KTADQLQEQLQRGKQEIEN 559
Cdd:TIGR02168  255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLeRQLEELEAQLEELESKLDE 334

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    560 LKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSESNSLQSQFDKVSCSESQLQSQCEQMK----QTNI 635
Cdd:TIGR02168  335 LAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEarleRLED 414

                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 36031016    636 NLESRLLKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQVES 710
Cdd:TIGR02168  415 RRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQA 489

Smc

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

229-707

3.39e-10

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.19 E-value: 3.39e-10

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 229 EKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQL-------------IAQDVTAKNAVQQLHKEMAQRME 295
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELeeaqaeeyellaeLARLEQDIARLEERRRELEERLE 319

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 296 QANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLI 375
Cdd:COG1196 320 ELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA 399

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 376 REIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEiKSNELDAK 455
Cdd:COG1196 400 AQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLE-EAALLEAA 478

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 456 LRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKE-----GMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQK 530
Cdd:COG1196 479 LAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLaglrgLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEV 558

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 531 AE--IQNLLDKVK---TADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSE 605
Cdd:COG1196 559 AAaaIEYLKAAKAgraTFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRR 638

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 606 SNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKDELVTQRR 685
Cdd:COG1196 639 AVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLE 718

                       490       500
                ....*....|....*....|..
gi 36031016 686 KHASSIKDLTKQLQQARRKLDQ 707
Cdd:COG1196 719 EELEEEALEEQLEAEREELLEE 740

SMC_prok_A

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...

212-534

3.94e-10

Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.93 E-value: 3.94e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    212 LIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQdvtaknaVQQLHKEMA 291
Cdd:TIGR02169  228 LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLR-------VKEKIGELE 300

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    292 QRMEQANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGET 371
Cdd:TIGR02169  301 AEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF 380

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    372 TRLIREIDKLKEDInshvikvkwaqNKLKAEMDSHKETKDKLKETTTKLTQAKEEadqirkncqdmIKTYQESEEIKSNE 451
Cdd:TIGR02169  381 AETRDELKDYREKL-----------EKLKREINELKRELDRLQEELQRLSEELAD-----------LNAAIAGIEAKINE 438

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    452 LDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKA 531
Cdd:TIGR02169  439 LEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKA 518


                   ...
gi 36031016    532 EIQ 534
Cdd:TIGR02169  519 SIQ 521

PRK03918

DNA double-strand break repair ATPase Rad50;

209-588

4.36e-10

DNA double-strand break repair ATPase Rad50;

Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.54 E-value: 4.36e-10

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  209 IKKLIKENKKHQELFVDICSEKDNLREELKKRTEtekqhmNTIKQLESRIEELNK---EVKASRDQLIAQDVTAKNAVQQ 285
Cdd:PRK03918 350 LEKRLEELEERHELYEEAKAKKEELERLKKRLTG------LTPEKLEKELEELEKakeEIEEEISKITARIGELKKEIKE 423

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  286 LHKEMaQRMEQANKKC-----EEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRL 360
Cdd:PRK03918 424 LKKAI-EELKKAKGKCpvcgrELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELA 502

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  361 HQLYETKEGETTRLIREIDKLKED---INSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDM 437
Cdd:PRK03918 503 EQLKELEEKLKKYNLEELEKKAEEyekLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEEL 582

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  438 IKTYQESEEIKSNELDA------KLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKclEDE 511
Cdd:PRK03918 583 GFESVEELEERLKELEPfyneylELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYS--EEE 660

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 36031016  512 RLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESEL 588
Cdd:PRK03918 661 YEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALL 737

SMC_prok_A

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...

251-579

9.69e-10

Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.78 E-value: 9.69e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    251 IKQLESRIEELNKEVKASRDQLIAQDVTAKNAVQQL-----HKEMAQRMEQANKKCEEARQ-----EKEAMVMKYVRGEK 320
Cdd:TIGR02169  165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLerlrrEREKAERYQALLKEKREYEGyellkEKEALERQKEAIER 244

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    321 ESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLhqlyetKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLK 400
Cdd:TIGR02169  245 QLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDL------GEEEQLRVKEKIGELEAEIASLERSIAEKERELE 318

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    401 ---AEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNEL---DAKLRVTKGELeKQMQEKSDQL 474
Cdd:TIGR02169  319 daeERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELeevDKEFAETRDEL-KDYREKLEKL 397

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    475 emhhakIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKtadQLQEQLQRGK 554
Cdd:TIGR02169  398 ------KREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLE---QLAADLSKYE 468

                          330       340
                   ....*....|....*....|....*
gi 36031016    555 QEIENLKEEVESLNSLINDLQKDIE 579
Cdd:TIGR02169  469 QELYDLKEEYDRVEKELSKLQRELA 493

PRK02224

DNA double-strand break repair Rad50 ATPase;

228-635

6.39e-09

DNA double-strand break repair Rad50 ATPase;

Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 59.67 E-value: 6.39e-09

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  228 SEKDNLREELKKRTETekqhmntIKQLESRIEELNKEvkASRDQLIAQDVTA-KNAVQQLHKEMAQRMEQANKKCEEARQ 306
Cdd:PRK02224 272 REREELAEEVRDLRER-------LEELEEERDDLLAE--AGLDDADAEAVEArREELEDRDEELRDRLEECRVAAQAHNE 342

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  307 EKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQE----KGRLHQLYETKEGETTR---LIREID 379
Cdd:PRK02224 343 EAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEieelRERFGDAPVDLGNAEDFleeLREERD 422

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  380 KLKEDINSHVIKVKWAQN--------------------------------------KLKAEMDSHKETKDKLKETTTKLT 421
Cdd:PRK02224 423 ELREREAELEATLRTARErveeaealleagkcpecgqpvegsphvetieedrerveELEAELEDLEEEVEEVEERLERAE 502

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  422 QAKEEADQI------RKNCQDMIKTYQESEEIKSNELdAKLRVTKGELEKQMQEKSD-------QLEMHHAKIKELEDLK 488
Cdd:PRK02224 503 DLVEAEDRIerleerREDLEELIAERRETIEEKRERA-EELRERAAELEAEAEEKREaaaeaeeEAEEAREEVAELNSKL 581

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  489 RTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEI--INRQKAE--------IQNLLDKVKTA--DQLQEQLQRGKQE 556
Cdd:PRK02224 582 AELKERIESLERIRTLLAAIADAEDEIERLREKREALaeLNDERRErlaekrerKRELEAEFDEAriEEAREDKERAEEY 661

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 36031016  557 IENLKEEVESLNSLINDLQKDIeGSRKRESELLlftERLTSKNAQLQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNI 635
Cdd:PRK02224 662 LEQVEEKLDELREERDDLQAEI-GAVENELEEL---EELRERREALENRVEALEALYDEAEELESMYGDLRAELRQRNV 736

SMC_prok_A

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...

235-570

6.90e-09

Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.70 E-value: 6.90e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    235 EELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVTAKNAVQQLHKEMAQRMEQAN------KKCEEARQEK 308
Cdd:TIGR02169  677 QRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEeleedlSSLEQEIENV 756

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    309 EAMvMKYVRGEKESLDLRKEK-----------------ETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGET 371
Cdd:TIGR02169  757 KSE-LKELEARIEELEEDLHKleealndlearlshsriPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEI 835

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    372 TRLIREIDKLKEDINShvikVKWAQNKLKAEMdshKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEiKSNE 451
Cdd:TIGR02169  836 QELQEQRIDLKEQIKS----IEKEIENLNGKK---EELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER-KIEE 907

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    452 LDAKLRvtkgELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTkvkcLEDERLRTEDELSKYKEIINRQka 531
Cdd:TIGR02169  908 LEAQIE----KKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLED----VQAELQRVEEEIRALEPVNMLA-- 977

                          330       340       350
                   ....*....|....*....|....*....|....*....
gi 36031016    532 eIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSL 570
Cdd:TIGR02169  978 -IQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015

PRK03918

DNA double-strand break repair ATPase Rad50;

249-709

6.96e-09

DNA double-strand break repair ATPase Rad50;

Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.69 E-value: 6.96e-09

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  249 NTIKQLESRIEELNKEVKASRD--QLIAQDVTAKNAVQQLHKEMAQRMEQANKKCEEARQEK---EAMVMKYVRGEKESL 323
Cdd:PRK03918 169 EVIKEIKRRIERLEKFIKRTENieELIKEKEKELEEVLREINEISSELPELREELEKLEKEVkelEELKEEIEELEKELE 248

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  324 DLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKE---------GETTRLIREIDKLKEDINSHVIKVKW 394
Cdd:PRK03918 249 SLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEeyiklsefyEEYLDELREIEKRLSRLEEEINGIEE 328

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  395 AQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNELDaKLRVTKGELEKQMQEKSDQL 474
Cdd:PRK03918 329 RIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPE-KLEKELEELEKAKEEIEEEI 407

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  475 EMHHAKIKELEDLKRTFKEGMDELRtlRTKVKCLEDERLRTEDElskYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGK 554
Cdd:PRK03918 408 SKITARIGELKKEIKELKKAIEELK--KAKGKCPVCGRELTEEH---RKELLEEYTAELKRIEKELKEIEEKERKLRKEL 482

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  555 QEIEN----------LKEEVESLNSLINDLQK-DIEGSRKRESELLLFTERLTSKNAQ---LQSESNSLQSQFDKVSCSE 620
Cdd:PRK03918 483 RELEKvlkkeselikLKELAEQLKELEEKLKKyNLEELEKKAEEYEKLKEKLIKLKGEiksLKKELEKLEELKKKLAELE 562

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  621 SQLQSQCEQMKQTNINLESRLLKEEELRKEEVQTLQA------ELACRQTEVKALSTQVEELKDELVTQRRKHA---SSI 691
Cdd:PRK03918 563 KKLDELEEELAELLKELEELGFESVEELEERLKELEPfyneylELKDAEKELEREEKELKKLEEELDKAFEELAeteKRL 642

                        490
                 ....*....|....*...
gi 36031016  692 KDLTKQLQQARRKLDQVE 709
Cdd:PRK03918 643 EELRKELEELEKKYSEEE 660

PTZ00121

MAEBL; Provisional

209-594

7.54e-09

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.77 E-value: 7.54e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   209 IKKLIKENKKHQELfVDICSEKDNLREELKKRTETEKQHMNTIKQLES--RIEELNKEVKASR--DQLIAQDVTAKNAVQ 284
Cdd:PTZ00121 1383 AKKKAEEKKKADEA-KKKAEEDKKKADELKKAAAAKKKADEAKKKAEEkkKADEAKKKAEEAKkaDEAKKKAEEAKKAEE 1461

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   285 QLHK-EMAQRMEQANKKCEEARQEKEAMvmKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQL 363
Cdd:PTZ00121 1462 AKKKaEEAKKADEAKKKAEEAKKADEAK--KKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEA 1539

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   364 YETKEGETTRLIREIDKLK--EDINSHVIKVKWAQNKL----KAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDM 437
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKkaEEKKKAEEAKKAEEDKNmalrKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   438 IKTYQESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTED 517
Cdd:PTZ00121 1620 IKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAE 1699

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 36031016   518 ELSKYKEIINRQKAEiqnlldkVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDiEGSRKRESELLLFTER 594
Cdd:PTZ00121 1700 EAKKAEELKKKEAEE-------KKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKD-EEEKKKIAHLKKEEEK 1768

EnvC

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...

327-584

7.73e-09

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 58.62 E-value: 7.73e-09

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 327 KEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINshvikvkwaqnklkaemdsh 406
Cdd:COG4942  20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELA-------------------- 79

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 407 kETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIksNELDAKLRVtkgeleKQMQEKSDQLEMHHAKIKELED 486
Cdd:COG4942  80 -ALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQ--PPLALLLSP------EDFLDAVRRLQYLKYLAPARRE 150

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 487 LKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDkvktadQLQEQLQRGKQEIENLKEEVES 566
Cdd:COG4942 151 QAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLA------RLEKELAELAAELAELQQEAEE 224

                       250
                ....*....|....*...
gi 36031016 567 LNSLINDLQKDIEGSRKR 584
Cdd:COG4942 225 LEALIARLEAEAAAAAER 242

PRK03918

DNA double-strand break repair ATPase Rad50;

364-609

1.20e-08

DNA double-strand break repair ATPase Rad50;

Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 58.92 E-value: 1.20e-08

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  364 YETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQE 443
Cdd:PRK03918 160 YENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEE 239

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  444 SEEIKsnELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKE---GMDELRTLRTKVKCLEDERLRTEDELS 520
Cdd:PRK03918 240 IEELE--KELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKElkeKAEEYIKLSEFYEEYLDELREIEKRLS 317

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  521 KYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSL------------------INDLQKDIEGSR 582
Cdd:PRK03918 318 RLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAkakkeelerlkkrltgltPEKLEKELEELE 397

                        250       260
                 ....*....|....*....|....*..
gi 36031016  583 KRESELLLFTERLTSKNAQLQSESNSL 609
Cdd:PRK03918 398 KAKEEIEEEISKITARIGELKKEIKEL 424

Mplasa_alph_rch

helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ...

209-632

1.51e-08

helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.

Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 58.49 E-value: 1.51e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   209 IKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQliaqdvtaknAVQQLHK 288
Cdd:TIGR04523 241 INEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQ----------KEQDWNK 310

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   289 EMAQRMEQANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKE 368
Cdd:TIGR04523 311 ELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLE 390

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   369 GETTRLIREIDKLKEDINSHVIKVKWAQ---NKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNcqdmIKTYQESE 445
Cdd:TIGR04523 391 SQINDLESKIQNQEKLNQQKDEQIKKLQqekELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKN----LDNTRESL 466

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   446 EIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEI 525
Cdd:TIGR04523 467 ETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDE 546

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   526 INRqkaeiqnlLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSE 605
Cdd:TIGR04523 547 LNK--------DDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKE 618

                         410       420
                  ....*....|....*....|....*..
gi 36031016   606 SNSLQSQFDKVSCSESQLQSQCEQMKQ 632
Cdd:TIGR04523 619 LEKAKKENEKLSSIIKNIKSKKNKLKQ 645

Mplasa_alph_rch

helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ...

196-680

1.63e-08

Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 58.49 E-value: 1.63e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   196 KCVQDKYLQQEHIIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQ 275
Cdd:TIGR04523  43 KTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKL 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   276 DVTAKNAVQQLhKEMAQRMEQANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNK------ 349
Cdd:TIGR04523 123 EVELNKLEKQK-KENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKllklel 201

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   350 ----IKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKE 425
Cdd:TIGR04523 202 llsnLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNK 281

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   426 EADQIRKNCQDMIKTYQESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKEL----EDLKRTFKEGMDELRTL 501
Cdd:TIGR04523 282 KIKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLneqiSQLKKELTNSESENSEK 361

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   502 RTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRG-----------KQEIENLKEEVESLNSL 570
Cdd:TIGR04523 362 QRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQikklqqekellEKEIERLKETIIKNNSE 441

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   571 INDLQKDIEGSRKRESELLLFTERLTSKNAQLQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLE---SRLLKEEEL 647
Cdd:TIGR04523 442 IKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEekvKDLTKKISS 521

                         490       500       510
                  ....*....|....*....|....*....|...
gi 36031016   648 RKEEVQTLQAELACRQTEVKALSTQVEELKDEL 680
Cdd:TIGR04523 522 LKEKIEKLESEKKEKESKISDLEDELNKDDFEL 554

Smc

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

229-739

2.31e-08

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.02 E-value: 2.31e-08

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 229 EKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQL--IAQDVTAKNAVQQLHKEMAQRMEQANKKCEEARQ 306
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELeeLELELEEAQAEEYELLAELARLEQDIARLEERRR 312

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 307 EKEAmvmkyvrgekESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDIN 386
Cdd:COG1196 313 ELEE----------RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELE 382

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 387 ShvikvkwAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDmiktyQESEEIKSNELDAKLRVTKGELEKQ 466
Cdd:COG1196 383 E-------LAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEE-----LEEALAELEEEEEEEEEALEEAAEE 450

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 467 MQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELS-KYKEIINRQKAEIQNLLDKVKTADQ 545
Cdd:COG1196 451 EAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEgFLEGVKAALLLAGLRGLAGAVAVLI 530

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 546 LQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSESNSLQSQFDKVSCSESQLQS 625
Cdd:COG1196 531 GVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLRE 610

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 626 qcEQMKQTNINLESRLLKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKL 705
Cdd:COG1196 611 --ADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERL 688

                       490       500       510
                ....*....|....*....|....*....|....
gi 36031016 706 DQVESGSYDKEVSSMGSRSSSSGSLNARSSAEDR 739
Cdd:COG1196 689 AEEELELEEALLAEEEEERELAEAEEERLEEELE 722

SMC_prok_A

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...

368-704

2.39e-08

Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.16 E-value: 2.39e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    368 EGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDmIKTYQESEEI 447
Cdd:TIGR02169  673 PAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEE-LEEDLSSLEQ 751

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    448 KSNELDAKLRvtkgELEKQMQEKSDQLEMHHAKIKELEDlkrtfKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIIN 527
Cdd:TIGR02169  752 EIENVKSELK----ELEARIEELEEDLHKLEEALNDLEA-----RLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLN 822

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    528 RQKAEIQNLLDKVKTA----DQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQ 603
Cdd:TIGR02169  823 RLTLEKEYLEKEIQELqeqrIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELE 902

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    604 SESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEE--LRKEEVQTLQAELACRQTEVKALST---------- 671
Cdd:TIGR02169  903 RKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEipEEELSLEDVQAELQRVEEEIRALEPvnmlaiqeye 982

                          330       340       350
                   ....*....|....*....|....*....|....*.
gi 36031016    672 QVEELKDELVTQRRK---HASSIKDLTKQLQQARRK 704
Cdd:TIGR02169  983 EVLKRLDELKEKRAKleeERKAILERIEEYEKKKRE 1018

Mplasa_alph_rch

helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ...

209-578

2.88e-08

Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 57.72 E-value: 2.88e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   209 IKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVTAKNAVQQLHk 288
Cdd:TIGR04523 372 IEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDS- 450

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   289 EMAQRMEQANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKE 368
Cdd:TIGR04523 451 VKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLE 530

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   369 GETTRLIREIDKLKEDINSHVIKVKWaqNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTY---QESE 445
Cdd:TIGR04523 531 SEKKEKESKISDLEDELNKDDFELKK--ENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLikeIEEK 608

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   446 EIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKY-KE 524
Cdd:TIGR04523 609 EKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDIIELMKDWlKE 688

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 36031016   525 IINRQKAEIQNLLdKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDI 578
Cdd:TIGR04523 689 LSLHYKKYITRMI-RIKDLPKLEEKYKEIEKELKKLDEFSKELENIIKNFNKKF 741

PTZ00121

MAEBL; Provisional

235-796

3.31e-08

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.84 E-value: 3.31e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   235 EELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVTAKNAVQQLHKEMAQRMEQANKKCEEARQEKEAMVMK 314
Cdd:PTZ00121 1191 EELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQA 1270

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   315 YVRGE--KESLDLRKEKETleKKLRDANK-ELEKNTNKIKQLSQEKGRLHQLYETKEGETtrliREIDKLKEDINSHVIK 391
Cdd:PTZ00121 1271 AIKAEeaRKADELKKAEEK--KKADEAKKaEEKKKADEAKKKAEEAKKADEAKKKAEEAK----KKADAAKKKAEEAKKA 1344

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   392 VKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKtyqeSEEIKSNELDAKLRVTKGELEKQMQEKS 471
Cdd:PTZ00121 1345 AEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKK----ADEAKKKAEEDKKKADELKKAAAAKKKA 1420

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   472 DQLEMHHAKIKELEDLKRTFKEG--MDELRTLRTKVKCLEDERLRTEDElskykeiinRQKAEIQNLLDKVKTADQLQEQ 549
Cdd:PTZ00121 1421 DEAKKKAEEKKKADEAKKKAEEAkkADEAKKKAEEAKKAEEAKKKAEEA---------KKADEAKKKAEEAKKADEAKKK 1491

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   550 LQRGKQEIENLKEEVESLNSLinDLQKDIEGSRKREsELLLFTERLTSKNAQLQSESNSLQSQFDKVSCSESQLQSQCEQ 629
Cdd:PTZ00121 1492 AEEAKKKADEAKKAAEAKKKA--DEAKKAEEAKKAD-EAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEE 1568

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   630 MKQTNINLESRLLKEEELRKEEVQTLQAELACRQTEVKALSTQV-----EELKDELVTQRRKHASSIKDLTKQLQQARRK 704
Cdd:PTZ00121 1569 AKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAkkaeeAKIKAEELKKAEEEKKKVEQLKKKEAEEKKK 1648

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   705 LDQVESGSYDKEVSSMGSRSSSSGslNARSSAEDRSPENTGSSVAVDNFPQVDKAMLIERIVRLQKAHARKNEKIEFMED 784
Cdd:PTZ00121 1649 AEELKKAEEENKIKAAEEAKKAEE--DKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEE 1726

                         570
                  ....*....|..
gi 36031016   785 HIKQLVEEIRKK 796
Cdd:PTZ00121 1727 ENKIKAEEAKKE 1738

SMC_prok_B

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

373-706

7.34e-08

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.60 E-value: 7.34e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    373 RLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQeSEEIKSNEL 452
Cdd:TIGR02168  681 ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIA-QLSKELTEL 759

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    453 DAKLRVTKGELEKQMQEKsdqlemhHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEiinRQKAE 532
Cdd:TIGR02168  760 EAEIEELEERLEEAEEEL-------AEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRE---RLESL 829

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    533 IQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEG----SRKRESELLLFTERLTSKNAQLQSESN- 607
Cdd:TIGR02168  830 ERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAllneRASLEEALALLRSELEELSEELRELESk 909

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    608 --SLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEELRKEEVQTLQA----ELACRQTEVKALSTQVEELKD--- 678
Cdd:TIGR02168  910 rsELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENkiedDEEEARRRLKRLENKIKELGPvnl 989

                          330       340       350
                   ....*....|....*....|....*....|....*...
gi 36031016    679 ------ELVTQRRKHASS-IKDLTK---QLQQARRKLD 706
Cdd:TIGR02168  990 aaieeyEELKERYDFLTAqKEDLTEakeTLEEAIEEID 1027

CwlO1

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ...

509-749

1.08e-07

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];

Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 55.22 E-value: 1.08e-07

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 509 EDERLRTEDELSKYKEIINRQKAEIQNLLDKVktaDQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESEL 588
Cdd:COG3883  15 DPQIQAKQKELSELQAELEAAQAELDALQAEL---EELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGER 91

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 589 LlfteRLTSKNAQLQS------ESNSLQSQFDKVSCSESQLQSQCEQMKQTNinlesrllkeeeLRKEEVQTLQAELACR 662
Cdd:COG3883  92 A----RALYRSGGSVSyldvllGSESFSDFLDRLSALSKIADADADLLEELK------------ADKAELEAKKAELEAK 155

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 663 QTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQVESGSYDKEVSSMGSRSSSSGSLNARSSAEDRSPE 742
Cdd:COG3883 156 LAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235


                ....*..
gi 36031016 743 NTGSSVA 749
Cdd:COG3883 236 AAAAAAA 242

SMC_prok_A

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...

253-598

1.48e-07

Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.46 E-value: 1.48e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    253 QLESRIEELNKEVKASRDQLiaqdvtakNAVQQLHKEMAQRMEQANKKCEEARQEKEAmvmkyvrgekesldLRKEKETL 332
Cdd:TIGR02169  678 RLRERLEGLKRELSSLQSEL--------RRIENRLDELSQELSDASRKIGEIEKEIEQ--------------LEQEEEKL 735

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    333 EKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQ-NKLKAEMDSHKETKD 411
Cdd:TIGR02169  736 KERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAElSKLEEEVSRIEARLR 815

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    412 KLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNELDaklrvtkgELEKQMQEKSDQLEMHHAKIKELEDLKRTF 491
Cdd:TIGR02169  816 EIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIE--------NLNGKKEELEEELEELEAALRDLESRLGDL 887

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    492 KEGMDElrtLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKT-----------------ADQLQEQLQRGK 554
Cdd:TIGR02169  888 KKERDE---LEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEiedpkgedeeipeeelsLEDVQAELQRVE 964

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|.
gi 36031016    555 QEIENLK-------EEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSK 598
Cdd:TIGR02169  965 EEIRALEpvnmlaiQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015

EnvC

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...

274-485

5.94e-07

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 5.94e-07

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 274 AQDVTAKNAVQQLhKEMAQRMEQANKKCEEARQEKEAMvmkyvrgEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQL 353
Cdd:COG4942  17 AQADAAAEAEAEL-EQLQQEIAELEKELAALKKEEKAL-------LKQLAALERRIAALARRIRALEQELAALEAELAEL 88

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 354 SQEKGRLHQLYETKEGETTRLIREIDKLK--------------EDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTK 419
Cdd:COG4942  89 EKEIAELRAELEAQKEELAELLRALYRLGrqpplalllspedfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAE 168

                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 36031016 420 LTQAKEEADQIRKNCQDMIKTYQESEEIKsNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELE 485
Cdd:COG4942 169 LEAERAELEALLAELEEERAALEALKAER-QKLLARLEKELAELAAELAELQQEAEELEALIARLE 233

PTZ00121

MAEBL; Provisional

210-585

6.74e-07

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.61 E-value: 6.74e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   210 KKLIKENKKHQELFVdicsEKDNLREELKKRTETEKQHMNTIKQLESR-IEELNKEVKASRDQLIAQDVTAKNAVQQLHK 288
Cdd:PTZ00121 1097 FGKAEEAKKTETGKA----EEARKAEEAKKKAEDARKAEEARKAEDARkAEEARKAEDAKRVEIARKAEDARKAEEARKA 1172

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   289 EMAQRMEQAnKKCEEARQEKEAMVMKYVRGEKESldlRKEKEtlEKKLRDANK-ELEKNTNKIKQLSQEKGRLHqlyETK 367
Cdd:PTZ00121 1173 EDAKKAEAA-RKAEEVRKAEELRKAEDARKAEAA---RKAEE--ERKAEEARKaEDAKKAEAVKKAEEAKKDAE---EAK 1243

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   368 EGETTRLIREIDKLKEDINSHVIKVKWA-QNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKtyqeSEE 446
Cdd:PTZ00121 1244 KAEEERNNEEIRKFEEARMAHFARRQAAiKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKK----ADE 1319

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   447 IKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLE----DERLRTEDELSKY 522
Cdd:PTZ00121 1320 AKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAakkkAEEKKKADEAKKK 1399

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 36031016   523 KEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSliNDLQKDIEGSRKRE 585
Cdd:PTZ00121 1400 AEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKA--DEAKKKAEEAKKAE 1460

CCDC158

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...

251-710

8.76e-07

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.

Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 52.81 E-value: 8.76e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    251 IKQLESRIEELNKEVKASRDQLIAQDVTAKNAVQQLHKEMAQRMEQAnkkCEEARQEKEAMVMKYVRGEKESLDLRKEKE 330
Cdd:pfam15921  226 LRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQL---ISEHEVEITGLTEKASSARSQANSIQSQLE 302

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    331 TLEKKLRDAN----KELEKNTNKIKQLSQEKGRLHQLYETKegettrlIREIDKLKEDINSHVIKVKWAQNKLKAEMDSH 406
Cdd:pfam15921  303 IIQEQARNQNsmymRQLSDLESTVSQLRSELREAKRMYEDK-------IEELEKQLVLANSELTEARTERDQFSQESGNL 375

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    407 KETKDKL--------KETTTKLTQAKEEADQIRKN--CQDMIKTYQESEEIKSNELDAKLRVTK----GELEKQM---QE 469
Cdd:pfam15921  376 DDQLQKLladlhkreKELSLEKEQNKRLWDRDTGNsiTIDHLRRELDDRNMEVQRLEALLKAMKsecqGQMERQMaaiQG 455

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    470 KSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQ 549
Cdd:pfam15921  456 KNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQH 535

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    550 LQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTER-------LTSKNAQLQSESNSLQSQF-------DK 615
Cdd:pfam15921  536 LKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQhgrtagaMQVEKAQLEKEINDRRLELqefkilkDK 615

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    616 VSCSESQLQ---SQCEQMKQTNINLESRLLKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKDELVTQRRKHASSIK 692
Cdd:pfam15921  616 KDAKIRELEarvSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTN 695

                          490
                   ....*....|....*...
gi 36031016    693 DLTKQLQQARRKLDQVES 710
Cdd:pfam15921  696 KLKMQLKSAQSELEQTRN 713

rad50

TIGR00606

rad50; All proteins in this family for which functions are known are involvedin recombination, ...

199-632

1.34e-06

rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 52.36 E-value: 1.34e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    199 QDKYLQQEHIIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVT 278
Cdd:TIGR00606  198 QGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSR 277

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    279 AKNaVQQLHKEMAQRMEQANKKCEEARQEKEAMVMKYVRGEkesldlrkeketlEKKLRDANKELEKNTNKIKQLSQEKG 358
Cdd:TIGR00606  278 KKQ-MEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVREK-------------ERELVDCQRELEKLNKERRLLNQEKT 343

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    359 RL----------------HQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQ 422
Cdd:TIGR00606  344 ELlveqgrlqlqadrhqeHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERL 423

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    423 AKEEADQIRKNCQDMIKTYQESEEIKSNELDaKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDElrTLR 502
Cdd:TIGR00606  424 KQEQADEIRDEKKGLGRTIELKKEILEKKQE-ELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTE--TLK 500

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    503 TKVKCLEDERL---RTEDELSKYKEIINRQKAEIQNLL----DKVKTADQLQEQLQRGKQEIENLKEEV---ESLNSLIN 572
Cdd:TIGR00606  501 KEVKSLQNEKAdldRKLRKLDQEMEQLNHHTTTRTQMEmltkDKMDKDEQIRKIKSRHSDELTSLLGYFpnkKQLEDWLH 580

                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 36031016    573 DLQKDIEGSRKRESELLLFTERLTSKNAQLQSESNSLQSQFDKVS------CSESQLQSQCEQMKQ 632
Cdd:TIGR00606  581 SKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEdklfdvCGSQDEESDLERLKE 646

SMC_prok_A

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...

328-631

1.36e-06

Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.38 E-value: 1.36e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    328 EKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEgETTRLIREIDKLKEDINSHVIKVKWAQ-NKLKAEMDSH 406
Cdd:TIGR02169  171 KKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAE-RYQALLKEKREYEGYELLKEKEALERQkEAIERQLASL 249

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    407 KETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELED 486
Cdd:TIGR02169  250 EEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEA 329

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    487 LKRTFKEGMDELRtlrtkvKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVES 566
Cdd:TIGR02169  330 EIDKLLAEIEELE------REIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINE 403

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 36031016    567 LNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSESNSLQsqfDKVSCSESQLQSQCEQMK 631
Cdd:TIGR02169  404 LKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKA---LEIKKQEWKLEQLAADLS 465

COG4913

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

466-705

1.81e-06

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.84 E-value: 1.81e-06

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  466 QMQEKSDQLEMHHAKIKELEDLKRTFkegmDELRTLRTKVKCLEdeRLRTEDElsKYKEiiNRQKAEIQNLLDKVKTADQ 545
Cdd:COG4913  216 YMLEEPDTFEAADALVEHFDDLERAH----EALEDAREQIELLE--PIRELAE--RYAA--ARERLAELEYLRAALRLWF 285

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  546 LQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLftERLTSKN---AQLQSESNSLQSQFDKVSCSESQ 622
Cdd:COG4913  286 AQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEA--QIRGNGGdrlEQLEREIERLERELEERERRRAR 363

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  623 LQSQCEQMKQTNINLESRLLKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKDELVTQRRKHAS---SIKDLTKQLQ 699
Cdd:COG4913  364 LEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASlerRKSNIPARLL 443


                 ....*.
gi 36031016  700 QARRKL 705
Cdd:COG4913  444 ALRDAL 449

Mplasa_alph_rch

helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ...

182-616

2.15e-06

Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 51.56 E-value: 2.15e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   182 NGMNKGEHALVLFEKCVQDKYLQQEHIIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESR---I 258
Cdd:TIGR04523 162 NDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKqqeI 241

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   259 EELNKEVKASRDQLIAQDVTAKNAVQQLhKEMAQRMEQANKKCEEARQ-----EKEAMVMKYVRGEKESLDLRKEKETLE 333
Cdd:TIGR04523 242 NEKTTEISNTQTQLNQLKDEQNKIKKQL-SEKQKELEQNNKKIKELEKqlnqlKSEISDLNNQKEQDWNKELKSELKNQE 320

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   334 KKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDInshvikvkwaqNKLKAEMDSHKETKDKL 413
Cdd:TIGR04523 321 KKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEI-----------EKLKKENQSYKQEIKNL 389

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   414 KETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNELDaKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKE 493
Cdd:TIGR04523 390 ESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIE-RLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLET 468

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   494 GMDEL----RTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIEN----LKEEVE 565
Cdd:TIGR04523 469 QLKVLsrsiNKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESkisdLEDELN 548

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 36031016   566 SLNSLIN--DLQKDIEGSRKRESELLLFTERLTSKNAQLQSESNSLQSQFDKV 616
Cdd:TIGR04523 549 KDDFELKkeNLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDL 601

PRK12704

phosphodiesterase; Provisional

232-378

2.45e-06

phosphodiesterase; Provisional

Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 50.93 E-value: 2.45e-06

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  232 NLREELKKRTETEKQHMNTIKQLesRIEELNKEVKASRDQLIAQDVTAKNAVQQLHKEMAQRMEQANKKCEEARQEKEAM 311
Cdd:PRK12704  35 EAEEEAKRILEEAKKEAEAIKKE--ALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEEL 112

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  312 VMKYVRGEKESLDLRKEKETLEKKLRDANKELEkntnKIKQLSQEKGR---LHQLYETKEGETTRLIREI 378
Cdd:PRK12704 113 EKKEKELEQKQQELEKKEEELEELIEEQLQELE----RISGLTAEEAKeilLEKVEEEARHEAAVLIKEI 178

EnvC

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...

510-707

3.22e-06

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 3.22e-06

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 510 DERLRTEDELSKYKEIINRQKAEIQNLLdkvKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELL 589
Cdd:COG4942  20 DAAAEAEAELEQLQQEIAELEKELAALK---KEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 590 LFTERLTSKNAQL--QSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEE-ELRKEEVQTLQAELACRQTEV 666
Cdd:COG4942  97 AELEAQKEELAELlrALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEElRADLAELAALRAELEAERAEL 176

                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 36031016 667 KALSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQ 707
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAE 217

CCDC158

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...

204-767

3.35e-06

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.

Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 51.27 E-value: 3.35e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    204 QQEHIIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLE---SRIEELNKEVKASRDQLIAQDVTAK 280
Cdd:pfam15921  104 QKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEaakCLKEDMLEDSNTQIEQLRKMMLSHE 183

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    281 NAVQQLHKEMAQRMEQANKKCeearQEKEAMVMKYVRGEKESL-----DLRKEKETLEKKLRDANKELE----KNTNKIK 351
Cdd:pfam15921  184 GVLQEIRSILVDFEEASGKKI----YEHDSMSTMHFRSLGSAIskilrELDTEISYLKGRIFPVEDQLEalksESQNKIE 259

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    352 -QLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKEtkdKLKETTTKLTQAKEEADQI 430
Cdd:pfam15921  260 lLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMR---QLSDLESTVSQLRSELREA 336

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    431 RKNCQDMIKTYQESEEIKSNELdAKLRVTKGELEKQMQEKSDQLEmhhakiKELEDLKRTFKegmdELRTLRTKVKCLED 510
Cdd:pfam15921  337 KRMYEDKIEELEKQLVLANSEL-TEARTERDQFSQESGNLDDQLQ------KLLADLHKREK----ELSLEKEQNKRLWD 405

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    511 ERLRTEDELSKYKEIINRQKAEIQNLLDKVKT-ADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKresell 589
Cdd:pfam15921  406 RDTGNSITIDHLRRELDDRNMEVQRLEALLKAmKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRK------ 479

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    590 lFTERLTSKNAQLQSESNSlqsqfdkVSCSESQLQSQCEQMKQTNINLeSRLLKEEELRKEEVQTLQAE---LACRQTEV 666
Cdd:pfam15921  480 -VVEELTAKKMTLESSERT-------VSDLTASLQEKERAIEATNAEI-TKLRSRVDLKLQELQHLKNEgdhLRNVQTEC 550

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    667 KALSTQVEElKDELVTQRRKHASSIKDLTKQLQQARRKLdQVESGSYDKEVSSMGSRSSSSGSLNARSSAEDRSPENTGS 746
Cdd:pfam15921  551 EALKLQMAE-KDKVIEILRQQIENMTQLVGQHGRTAGAM-QVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVS 628

                          570       580
                   ....*....|....*....|.
gi 36031016    747 SVAVDNFPQVDKAMLIERIVR 767
Cdd:pfam15921  629 DLELEKVKLVNAGSERLRAVK 649

YhaN

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

233-705

5.10e-06

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.15 E-value: 5.10e-06

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 233 LREELKKRTET-EKQHMNTIKQLESRIEELNKEVKASRDQliaqdvtaknavQQLHKEMAQRMEQANKKCEEARQEKEAm 311
Cdd:COG4717  47 LLERLEKEADElFKPQGRKPELNLKELKELEEELKEAEEK------------EEEYAELQEELEELEEELEELEAELEE- 113

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 312 vmkyVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIK 391
Cdd:COG4717 114 ----LREELEKLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLA 189

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 392 VKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNELDAKLRVTKGELEKQMQEKS 471
Cdd:COG4717 190 TEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLL 269

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 472 DQLEMHHAKIK--------ELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTA 543
Cdd:COG4717 270 SLILTIAGVLFlvlgllalLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEEL 349

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 544 DQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLF---TERLTSKNAQLQSESNSLQSQFDKVscSE 620
Cdd:COG4717 350 QELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYqelKEELEELEEQLEELLGELEELLEAL--DE 427

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 621 SQLQSQCEQMKQTninlESRLLKEEELRKEEVQTLQAEL--ACRQTEVKALSTQVEELKDELvTQRRKHASSIKDLTKQL 698
Cdd:COG4717 428 EELEEELEELEEE----LEELEEELEELREELAELEAELeqLEEDGELAELLQELEELKAEL-RELAEEWAALKLALELL 502


                ....*..
gi 36031016 699 QQARRKL 705
Cdd:COG4717 503 EEAREEY 509

Mplasa_alph_rch

helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ...

239-710

5.64e-06

Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.02 E-value: 5.64e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   239 KRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIaQDVTAKNAVQQLHKEMAQRMEQANKKCEEARQEKEAMVMKYVRG 318
Cdd:TIGR04523  30 KQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLN-KDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKI 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   319 EKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKL----------KEDINSH 388
Cdd:TIGR04523 109 NSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELenelnllekeKLNIQKN 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   389 VIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCqdmiktyqESEEIKSNELDAKLRVTKGELEKQMQ 468
Cdd:TIGR04523 189 IDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNI--------EKKQQEINEKTTEISNTQTQLNQLKD 260

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   469 EKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDErlRTEDELSKYKEIINRQKAEIQNLLDKVktaDQLQE 548
Cdd:TIGR04523 261 EQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQ--KEQDWNKELKSELKNQEKKLEEIQNQI---SQNNK 335

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   549 QLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSESNSLQSQFDKVSCSESQLQSQCE 628
Cdd:TIGR04523 336 IISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIK 415

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   629 QMKQTNINLESRLLKEEELRKEEVQTLQaELACRQTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQV 708
Cdd:TIGR04523 416 KLQQEKELLEKEIERLKETIIKNNSEIK-DLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSK 494


                  ..
gi 36031016   709 ES 710
Cdd:TIGR04523 495 EK 496

SMC_prok_A

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...

443-799

5.95e-06

Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.45 E-value: 5.95e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    443 ESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKY 522
Cdd:TIGR02169  684 EGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKEL 763

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    523 KEIINRQKAEIQNLLDKVKT--ADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEgsrkreselllfteRLTSKNA 600
Cdd:TIGR02169  764 EARIEELEEDLHKLEEALNDleARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLN--------------RLTLEKE 829

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    601 QLQSESNSLQSQFDKVscsESQLQSQCEQMKQTNINLESrllkeeelrkeeVQtlqAELACRQTEVKALSTQVEELKDEl 680
Cdd:TIGR02169  830 YLEKEIQELQEQRIDL---KEQIKSIEKEIENLNGKKEE------------LE---EELEELEAALRDLESRLGDLKKE- 890

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    681 vtqrrkhassIKDLTKQLQQARRKLDQVESGSYDKEVSSMGSRSSSSGSLNARSSAEDRSPENTGSSVAVDNFPQVdKAM 760
Cdd:TIGR02169  891 ----------RDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDV-QAE 959

                          330       340       350
                   ....*....|....*....|....*....|....*....
gi 36031016    761 LIERIVRLQKAHARKNEKIEFMEDHIKQLVEEIRKKTKI 799
Cdd:TIGR02169  960 LQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKL 998

EnvC

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...

401-605

9.76e-06

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 9.76e-06

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 401 AEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEiKSNELDAKLRVTKGELeKQMQEKSDQLEMHHAK 480
Cdd:COG4942  17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALER-RIAALARRIRALEQEL-AALEAELAELEKEIAE 94

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 481 I-KELEDLKRTFKEGMDEL----RTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQ 555
Cdd:COG4942  95 LrAELEAQKEELAELLRALyrlgRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174

                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 36031016 556 EIENLKEEVESL-----------NSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSE 605
Cdd:COG4942 175 ELEALLAELEEEraalealkaerQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235

PRK01156

chromosome segregation protein; Provisional

199-583

1.64e-05

chromosome segregation protein; Provisional

Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 48.74 E-value: 1.64e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  199 QDKYLQQEHIIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLiaQDVT 278
Cdd:PRK01156 345 KSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKL--QDIS 422

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  279 AK-NAVQQLHKEMAQRMEQANKKCEEARQEKEAMVMKYVRGEKESLDLRK----EKETLEKKLRDANKELEKNTNKIKQL 353
Cdd:PRK01156 423 SKvSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGEEKSNHIINhyneKKSRLEEKIREIEIEVKDIDEKIVDL 502

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  354 SQEKGRLHQlyetkeGETTRLIREIDKLkEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEA------ 427
Cdd:PRK01156 503 KKRKEYLES------EEINKSINEYNKI-ESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSwlnala 575

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  428 -------DQIRKNCQDMIKTYQESEEiKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRtfkegmdELRT 500
Cdd:PRK01156 576 vislidiETNRSRSNEIKKQLNDLES-RLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKI-------LIEK 647

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  501 LRTKVKCLEDErlrtedeLSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQ-------RGKQEIENLKEEVESLNSLIND 573
Cdd:PRK01156 648 LRGKIDNYKKQ-------IAEIDSIIPDLKEITSRINDIEDNLKKSRKALDdakanraRLESTIEILRTRINELSDRIND 720

                        410
                 ....*....|
gi 36031016  574 LQKDIEGSRK 583
Cdd:PRK01156 721 INETLESMKK 730

COG1340

Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];

325-595

2.09e-05

Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];

Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 47.21 E-value: 2.09e-05

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 325 LRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKE---DINSHVIKVKWAQNKLKA 401
Cdd:COG1340   6 LSSSLEELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREkrdELNEKVKELKEERDELNE 85

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 402 EMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESeeiksneldaklrVTKGELEKQMQEKSDQLEMHHAKI 481
Cdd:COG1340  86 KLNELREELDELRKELAELNKAGGSIDKLRKEIERLEWRQQTE-------------VLSPEEEKELVEKIKELEKELEKA 152

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 482 KELEDLKRTFKEGMDELRTLRTKVKCLEDErlrtedeLSKYKEIINRQKAEIQNLLDKvktADQLQEQLQRGKQEIENLK 561
Cdd:COG1340 153 KKALEKNEKLKELRAELKELRKEAEEIHKK-------IKELAEEAQELHEEMIELYKE---ADELRKEADELHKEIVEAQ 222

                       250       260       270
                ....*....|....*....|....*....|....
gi 36031016 562 EEVESLNSLINDLQKDIEGSRKRESELLLFTERL 595
Cdd:COG1340 223 EKADELHEEIIELQKELRELRKELKKLRKKQRAL 256

GumC

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

496-707

2.52e-05

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.09 E-value: 2.52e-05

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 496 DELRTLRTKVKclederlRTEDELSKYKEIinrqkaeiQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQ 575
Cdd:COG3206 182 EQLPELRKELE-------EAEAALEEFRQK--------NGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALR 246

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 576 KDIEGSRKRESELLlfterLTSKNAQLQSESNSLQSQFDKVScseSQLQSQCEQMKQTNINLESRLLKEEELRKEEVQTL 655
Cdd:COG3206 247 AQLGSGPDALPELL-----QSPVIQQLRAQLAELEAELAELS---ARYTPNHPDVIALRAQIAALRAQLQQEAQRILASL 318

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 36031016 656 QAELACRQTEVKALSTQVEELKDELVTQRRKhASSIKDLTKQLQQARRKLDQ 707
Cdd:COG3206 319 EAELEALQAREASLQAQLAQLEARLAELPEL-EAELRRLEREVEVARELYES 369

PRK02224

DNA double-strand break repair Rad50 ATPase;

214-710

2.54e-05

DNA double-strand break repair Rad50 ATPase;

Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 48.11 E-value: 2.54e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  214 KENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEElnkevkasrdqliaqdvtaknavqqlHKEMAQR 293
Cdd:PRK02224 199 KEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEE--------------------------HEERREE 252

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  294 MEQANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLhqlyETKEGETTR 373
Cdd:PRK02224 253 LETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREEL----EDRDEELRD 328

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  374 LIREidklkedinshvikVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNELD 453
Cdd:PRK02224 329 RLEE--------------CRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIE 394

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  454 ------AKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKC------LED-ERLRTEDELS 520
Cdd:PRK02224 395 elrerfGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKCpecgqpVEGsPHVETIEEDR 474

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  521 KYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNA 600
Cdd:PRK02224 475 ERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAE 554

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  601 QLQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLEsrllkeeelrkeEVQTLQAELACRQTEVKALSTQVEELkDEL 680
Cdd:PRK02224 555 EKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLE------------RIRTLLAAIADAEDEIERLREKREAL-AEL 621

                        490       500       510
                 ....*....|....*....|....*....|....*....
gi 36031016  681 VTQRRKHASSIKDLTKQL---------QQARRKLDQVES 710
Cdd:PRK02224 622 NDERRERLAEKRERKRELeaefdeariEEAREDKERAEE 660

MARTX_Nterm

NF012221

MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ...

204-435

2.71e-05

Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 48.29 E-value: 2.71e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   204 QQEHIIKKLIKENKKHQELFVDicSEKdnlREELKKRTETEKQHM-----NTIKQLESRIEE-LNKEVKASRDQLIAQdv 277
Cdd:NF012221 1542 QQADAVSKHAKQDDAAQNALAD--KER---AEADRQRLEQEKQQQlaaisGSQSQLESTDQNaLETNGQAQRDAILEE-- 1614

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   278 taKNAVQQLHKEMAQRME----QANKKCEEARQEKEAMVMKYVRGEKESLDlrKEKETLEKKLRDANKELEKNTNKIKQ- 352
Cdd:NF012221 1615 --SRAVTKELTTLAQGLDaldsQATYAGESGDQWRNPFAGGLLDRVQEQLD--DAKKISGKQLADAKQRHVDNQQKVKDa 1690

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   353 LSQEKGRLHQLYETKEGETTRlireIDKLKEDINSH----VIKVKWAQnklKAEMDSHKETKDKLKETTTKLTQAKEEAD 428
Cdd:NF012221 1691 VAKSEAGVAQGEQNQANAEQD----IDDAKADAEKRkddaLAKQNEAQ---QAESDANAAANDAQSRGEQDASAAENKAN 1763


                  ....*..
gi 36031016   429 QIRKNCQ 435
Cdd:NF012221 1764 QAQADAK 1770

EnvC

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...

508-710

2.80e-05

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 2.80e-05

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 508 LEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQ----LQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRK 583
Cdd:COG4942  25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERriaaLARRIRALEQELAALEAELAELEKEIAELRAELEAQKE 104

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 584 RESELLLFTERLTSKNAQL----QSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEELRKE------EVQ 653
Cdd:COG4942 105 ELAELLRALYRLGRQPPLAlllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEleallaELE 184

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 36031016 654 TLQAELACRQTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQVES 710
Cdd:COG4942 185 EERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241

235kDa-fam

TIGR01612

reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ...

228-583

3.33e-05

reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.

Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 48.12 E-value: 3.33e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    228 SEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVtaknavqqlhKEMAQRMEQANKKCEEARQE 307
Cdd:TIGR01612 1318 SDINDIKKELQKNLLDAQKHNSDINLYLNEIANIYNILKLNKIKKIIDEV----------KEYTKEIEENNKNIKDELDK 1387

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    308 KEAMVMKYvrgeKESLDLRKEKETLEKKLRDanKELEKNTNKIKQ-----LSQEKGRLHQLYETKE-GETTRLIREIDKL 381
Cdd:TIGR01612 1388 SEKLIKKI----KDDINLEECKSKIESTLDD--KDIDECIKKIKElknhiLSEESNIDTYFKNADEnNENVLLLFKNIEM 1461

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    382 KEDINSHVIKVK---------WAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEeiksneL 452
Cdd:TIGR01612 1462 ADNKSQHILKIKkdnatndhdFNINELKEHIDKSKGCKDEADKNAKAIEKNKELFEQYKKDVTELLNKYSALA------I 1535

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    453 DAKLRVTKGELEKQMQEKSD-------QLEMHHAKIKELEDLKRTFKEGMDE--------------LRTLRTKVKCLEDE 511
Cdd:TIGR01612 1536 KNKFAKTKKDSEIIIKEIKDahkkfilEAEKSEQKIKEIKKEKFRIEDDAAKndksnkaaidiqlsLENFENKFLKISDI 1615

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    512 RLRTEDELSKYKEI--------INRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRK 583
Cdd:TIGR01612 1616 KKKINDCLKETESIekkissfsIDSQDTELKENGDNLNSLQEFLESLKDQKKNIEDKKKELDELDSEIEKIEIDVDQHKK 1695

sbcc

TIGR00618

exonuclease SbcC; All proteins in this family for which functions are known are part of an ...

229-708

3.45e-05

exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]

Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 47.66 E-value: 3.45e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    229 EKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVT-----AKNAVQQLHKEMAQRMEQANKKCEE 303
Cdd:TIGR00618  254 EQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTqieqqAQRIHTELQSKMRSRAKLLMKRAAH 333

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    304 ARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKN-TNKIKQLSQEKGRLHQLYETKEGETTRLIRE---ID 379
Cdd:TIGR00618  334 VKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTlTQHIHTLQQQKTTLTQKLQSLCKELDILQREqatID 413

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    380 KLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNE-----LDA 454
Cdd:TIGR00618  414 TRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQEtrkkaVVL 493

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    455 KLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMD--------------ELRTLRTKVKCLEDERLRTEDELS 520
Cdd:TIGR00618  494 ARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQtyaqletseedvyhQLTSERKQRASLKEQMQEIQQSFS 573

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    521 KYKEIINRQKAEIQNLLDKV-KTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTerltskn 599
Cdd:TIGR00618  574 ILTQCDNRSKEDIPNLQNITvRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLT------- 646

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    600 AQLQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKDE 679
Cdd:TIGR00618  647 ALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENA 726

                          490       500
                   ....*....|....*....|....*....
gi 36031016    680 LVTQRRKHASSIKDLTKQLQQARRKLDQV 708
Cdd:TIGR00618  727 SSSLGSDLAAREDALNQSLKELMHQARTV 755

YhaN

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

210-602

4.15e-05

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 4.15e-05

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 210 KKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQL-----IAQDVTAKNAVQ 284
Cdd:COG4717  56 DELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELeklekLLQLLPLYQELE 135

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 285 QLHKEMAQRMEQAnKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDAN-KELEKNTNKIKQLSQEKGRLHQL 363
Cdd:COG4717 136 ALEAELAELPERL-EELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATeEELQDLAEELEELQQRLAELEEE 214

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 364 YETKEGETTRLIREIDKLKEDINSHVIKVKWAQNK-----------LKAEMDSHKET---------------------KD 411
Cdd:COG4717 215 LEEAQEELEELEEELEQLENELEAAALEERLKEARlllliaaallaLLGLGGSLLSLiltiagvlflvlgllallfllLA 294

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 412 KLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNELDAKLRVTKGELE--KQMQEKSDQLEmHHAKIKELEDLKR 489
Cdd:COG4717 295 REKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEelQELLREAEELE-EELQLEELEQEIA 373

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 490 TF--KEGMDELRTLRTKVKcLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVkTADQLQEQLQRGKQEIENLKEEVESL 567
Cdd:COG4717 374 ALlaEAGVEDEEELRAALE-QAEEYQELKEELEELEEQLEELLGELEELLEAL-DEEELEEELEELEEELEELEEELEEL 451

                       410       420       430
                ....*....|....*....|....*....|....*..
gi 36031016 568 NSLINDLQKDIE--GSRKRESELLLFTERLTSKNAQL 602
Cdd:COG4717 452 REELAELEAELEqlEEDGELAELLQELEELKAELREL 488

SMC_N

pfam02463

RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ...

232-587

5.15e-05

RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.

Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 47.27 E-value: 5.15e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    232 NLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVTAKNAVQQLHKEMAQRMEQANKKCEEARQEKEAm 311
Cdd:pfam02463  166 RLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQE- 244

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    312 vmKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIK 391
Cdd:pfam02463  245 --LLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKE 322

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    392 VKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNcqdmiktyQESEEIKSNELDAKLRVTKGELEKQMQEKS 471
Cdd:pfam02463  323 KKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKL--------QEKLEQLEEELLAKKKLESERLSSAAKLKE 394

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    472 DQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKvkclEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQ 551
Cdd:pfam02463  395 EELELKSEEEKEAQLLLELARQLEDLLKEEKKE----ELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKS 470

                          330       340       350
                   ....*....|....*....|....*....|....*.
gi 36031016    552 RGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESE 587
Cdd:pfam02463  471 EDLLKETQLVKLQEQLELLLSRQKLEERSQKESKAR 506

YhaN

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

203-585

5.64e-05

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 5.64e-05

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 203 LQQEHIIKKLIKENKKHQELFVDICSEKDNLREELK------KRTETEKQHMNTIKQLESRIEELnKEVKASRDQLIAQD 276
Cdd:COG4717  70 LKELKELEEELKEAEEKEEEYAELQEELEELEEELEeleaelEELREELEKLEKLLQLLPLYQEL-EALEAELAELPERL 148

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 277 VTAKNAVQQLhKEMAQRMEQANKKCEEARQEKEAMVMKYVRGEKESL--------DLRKEKETLEKKLRDANKELEKNTN 348
Cdd:COG4717 149 EELEERLEEL-RELEEELEELEAELAELQEELEELLEQLSLATEEELqdlaeeleELQQRLAELEEELEEAQEELEELEE 227

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 349 KIKQLSQEKGRLHQLYETKEGETTRLI-------REIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLT 421
Cdd:COG4717 228 ELEQLENELEAAALEERLKEARLLLLIaaallalLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEEL 307

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 422 QAKEEADQIRKNCQDMIKTYQESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEmhHAKIKELEDLKRTF--KEGMDELR 499
Cdd:COG4717 308 QALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEE--ELQLEELEQEIAALlaEAGVEDEE 385

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 500 TLRTKVKcLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTAD------QLQEQLQRGKQEIENLKEEVESLNSLIND 573
Cdd:COG4717 386 ELRAALE-QAEEYQELKEELEELEEQLEELLGELEELLEALDEEEleeeleELEEELEELEEELEELREELAELEAELEQ 464

                       410
                ....*....|..
gi 36031016 574 LQKDIEGSRKRE 585
Cdd:COG4717 465 LEEDGELAELLQ 476

EnvC

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...

482-709

6.70e-05

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 6.70e-05

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 482 KELEDLKRtfkegmdelrtlrtkvkclederlrtedELSKYKEIINRQKAEIQNLLDKVKTADQ----LQEQLQRGKQEI 557
Cdd:COG4942  27 AELEQLQQ----------------------------EIAELEKELAALKKEEKALLKQLAALERriaaLARRIRALEQEL 78

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 558 ENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQL----QSESNSLQSQFDKVSCSESQLQSQCEQMKQT 633
Cdd:COG4942  79 AALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLAlllsPEDFLDAVRRLQYLKYLAPARREQAEELRAD 158

                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 36031016 634 NINLEsRLLKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQVE 709
Cdd:COG4942 159 LAELA-ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233

PRK01156

chromosome segregation protein; Provisional

204-709

1.07e-04

chromosome segregation protein; Provisional

Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 46.05 E-value: 1.07e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  204 QQEHIIKKLIKENKKHQELFVDICSEKDNLREELKK--------------------RTETEKQHMNTIKQLESRIEEL-N 262
Cdd:PRK01156 208 DDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNElssledmknryeseiktaesDLSMELEKNNYYKELEERHMKIiN 287

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  263 KEVKASRDQLIA-----QDVTAKNAVQQLHKEMAQRMEQANKKCEEARQEKEAMVMKyvRGEKESLD-LRKEKETLEKKL 336
Cdd:PRK01156 288 DPVYKNRNYINDyfkykNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKK--KSRYDDLNnQILELEGYEMDY 365

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  337 RDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKET 416
Cdd:PRK01156 366 NSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRN 445

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  417 TTKLTQAKE----EADQIRKNCQDMIKTYQEseeiKSNELDAKLRVTKGELEKQMQEKSDQLEMhhAKIKELEDLKRTFK 492
Cdd:PRK01156 446 MEMLNGQSVcpvcGTTLGEEKSNHIINHYNE----KKSRLEEKIREIEIEVKDIDEKIVDLKKR--KEYLESEEINKSIN 519

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  493 EgMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKvKTADQLQEQLQRGKQEIENLKEEVESLNSLIN 572
Cdd:PRK01156 520 E-YNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDS-KRTSWLNALAVISLIDIETNRSRSNEIKKQLN 597

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  573 DLQKdieGSRKRESELLLFTERLTSKNAQLQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEELRKEEV 652
Cdd:PRK01156 598 DLES---RLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITS 674

                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  653 QTLQAElacrqTEVKALSTQVEELKDELVTQRRKHA---SSIKDLTKQLQQARRKLDQVE 709
Cdd:PRK01156 675 RINDIE-----DNLKKSRKALDDAKANRARLESTIEilrTRINELSDRINDINETLESMK 729

CCDC158

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...

204-701

1.11e-04

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.

Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 46.26 E-value: 1.11e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    204 QQEHIIKKLIKENKKHQELFVDICSEKDNLREELKkrtETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVTAKNAV 283
Cdd:pfam15921  300 QLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELR---EAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLD 376

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    284 QQLHKEMAQrmeqANKKCEEARQEKEAMVMKYVRGEKESLDLrkekETLEKKLRDANKELEKNTNKIKQLSQE-KGRLHQ 362
Cdd:pfam15921  377 DQLQKLLAD----LHKREKELSLEKEQNKRLWDRDTGNSITI----DHLRRELDDRNMEVQRLEALLKAMKSEcQGQMER 448

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    363 LYETKEGETTRLiREIDKLKEDINShvikVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQ 442
Cdd:pfam15921  449 QMAAIQGKNESL-EKVSSLTAQLES----TKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLR 523

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    443 ESEEIKSNELdaKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDEL-----RT---LRTKVKCLEDERLR 514
Cdd:pfam15921  524 SRVDLKLQEL--QHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLvgqhgRTagaMQVEKAQLEKEIND 601

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    515 TEDELSKYKEIINRQKAEIQNL--------LDKVKTADQLQEQLQRG---KQEIENLKEEVESLNSLINDLQKDIE---- 579
Cdd:pfam15921  602 RRLELQEFKILKDKKDAKIRELearvsdleLEKVKLVNAGSERLRAVkdiKQERDQLLNEVKTSRNELNSLSEDYEvlkr 681

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    580 GSRKRESELLLFTERLT----SKNAQLQSESNSLQS-----------------QFDKVSCSESQLQSQCEQMKQ--TNIN 636
Cdd:pfam15921  682 NFRNKSEEMETTTNKLKmqlkSAQSELEQTRNTLKSmegsdghamkvamgmqkQITAKRGQIDALQSKIQFLEEamTNAN 761

                          490       500       510       520       530       540
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 36031016    637 LESRLLKEEELRkeevqtLQAELACRQTEVKALSTQVEELKdelvTQRRKHASSIKDLTKQLQQA 701
Cdd:pfam15921  762 KEKHFLKEEKNK------LSQELSTVATEKNKMAGELEVLR----SQERRLKEKVANMEVALDKA 816

SMC_prok_A

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...

451-706

1.34e-04

Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.83 E-value: 1.34e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    451 ELDAKLRVTKGELEkQMQEKSDQLEmhhAKIKELedlkrtfKEGMDELRTLRTKVKCLEDERLRTED----ELSKYKEII 526
Cdd:TIGR02169  167 EFDRKKEKALEELE-EVEENIERLD---LIIDEK-------RQQLERLRREREKAERYQALLKEKREyegyELLKEKEAL 235

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    527 NRQKAEIQNLLDkvktadQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEgsRKRESELLLFTERL---TSKNAQLQ 603
Cdd:TIGR02169  236 ERQKEAIERQLA------SLEEELEKLTEEISELEKRLEEIEQLLEELNKKIK--DLGEEEQLRVKEKIgelEAEIASLE 307

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    604 SESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEELR---KEEVQTLQAELACRQTEVKALSTQVEELKDEL 680
Cdd:TIGR02169  308 RSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRdklTEEYAELKEELEDLRAELEEVDKEFAETRDEL 387

                          250       260
                   ....*....|....*....|....*.
gi 36031016    681 VTQRRKhassIKDLTKQLQQARRKLD 706
Cdd:TIGR02169  388 KDYREK----LEKLKREINELKRELD 409

PRK05771

V-type ATP synthase subunit I; Validated

419-597

1.35e-04

V-type ATP synthase subunit I; Validated

Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 45.69 E-value: 1.35e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  419 KLTQAKEEADQIrKNCQDMIKTYQESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEmhhAKIKELEDLKRTFKEGMDEL 498
Cdd:PRK05771  44 RLRKLRSLLTKL-SEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIE---KEIKELEEEISELENEIKEL 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  499 RTLRTKVKCL-----EDERLRT------------EDELSKYKEIINRQKAEIQN---------LLDKVKTADQLQEQLQR 552
Cdd:PRK05771 120 EQEIERLEPWgnfdlDLSLLLGfkyvsvfvgtvpEDKLEELKLESDVENVEYIStdkgyvyvvVVVLKELSDEVEEELKK 199

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 36031016  553 G-------------KQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTS 597
Cdd:PRK05771 200 LgferleleeegtpSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLE 257

DR0291

COG1579

Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ...

251-404

1.40e-04

Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];

Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 44.15 E-value: 1.40e-04

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 251 IKQLESRIEELNKEVKASRDQLIAQD---VTAKNAVQQLHKEMAqRMEQANKKCEEARQEKEAMVMKyVRGEKESLDLRK 327
Cdd:COG1579  19 LDRLEHRLKELPAELAELEDELAALEarlEAAKTELEDLEKEIK-RLELEIEEVEARIKKYEEQLGN-VRNNKEYEALQK 96

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 36031016 328 EKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMD 404
Cdd:COG1579  97 EIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKIP 173

PRK03918

DNA double-strand break repair ATPase Rad50;

234-567

1.45e-04

DNA double-strand break repair ATPase Rad50;

Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 1.45e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  234 REELKKR-TETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVTAKNavqqlhKEMAQRMEQANKKCEEARQEK-EAM 311
Cdd:PRK03918 450 RKELLEEyTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKL------KELAEQLKELEEKLKKYNLEElEKK 523

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  312 VMKYVRGEKESLDLRKEKETLE---KKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSH 388
Cdd:PRK03918 524 AEEYEKLKEKLIKLKGEIKSLKkelEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNE 603

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  389 VIKVKWAQNKLKAEmdshketKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNELDAKLRVTKGELEKQMQ 468
Cdd:PRK03918 604 YLELKDAEKELERE-------EKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELA 676

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  469 EKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIinRQKAEIQNLLDKVKTADQLQE 548
Cdd:PRK03918 677 GLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKY--KALLKERALSKVGEIASEIFE 754

                        330
                 ....*....|....*....
gi 36031016  549 QLQRGKQEIENLKEEVESL 567
Cdd:PRK03918 755 ELTEGKYSGVRVKAEENKV 773

Smc

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

204-707

1.82e-04

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 45.31 E-value: 1.82e-04

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 204 QQEHIIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVTAKNAV 283
Cdd:COG1196 320 ELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA 399

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 284 QQLhKEMAQRMEQANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQL 363
Cdd:COG1196 400 AQL-EELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAA 478

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 364 YETKEGETTRLIREIDKLKEDINSHVIKVK-WAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNcQDMIKTYQ 442
Cdd:COG1196 479 LAELLEELAEAAARLLLLLEAEADYEGFLEgVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQ-NIVVEDDE 557

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 443 ESEEIKSNELDAKL-RVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVkcLEDERLRTEDELSK 521
Cdd:COG1196 558 VAAAAIEYLKAAKAgRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDT--LLGRTLVAARLEAA 635

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 522 ykeiINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQ 601
Cdd:COG1196 636 ----LRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAE 711

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 602 LQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEELRKEEVQTLQAELACRQTEVKALST---------- 671
Cdd:COG1196 712 AEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPvnllaieeye 791

                       490       500       510
                ....*....|....*....|....*....|....*....
gi 36031016 672 QVEELKDELVTQRrkhassiKDLT---KQLQQARRKLDQ 707
Cdd:COG1196 792 ELEERYDFLSEQR-------EDLEearETLEEAIEEIDR 823

PRK01156

chromosome segregation protein; Provisional

228-716

1.91e-04

chromosome segregation protein; Provisional

Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 45.28 E-value: 1.91e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  228 SEKDNLREELKKRTETEKQHMNTIKQLES-------RIEELNKEVKASRDQLIAQDVTAKNAVQQLhkEMAQRMEQANKK 300
Cdd:PRK01156 183 SNIDYLEEKLKSSNLELENIKKQIADDEKshsitlkEIERLSIEYNNAMDDYNNLKSALNELSSLE--DMKNRYESEIKT 260

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  301 CEEARQEKEAMVMKYVRGEKESLDL------------------RKEKETLEKKLRDANKELEKNTNKIKQLSqEKGRLHQ 362
Cdd:PRK01156 261 AESDLSMELEKNNYYKELEERHMKIindpvyknrnyindyfkyKNDIENKKQILSNIDAEINKYHAIIKKLS-VLQKDYN 339

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  363 LYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQ 442
Cdd:PRK01156 340 DYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQ 419

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  443 ESEEIKSNeldakLRVTKGELEKQMQEKSDQLEMHHAKIK--------ELEDLKRTFKEGMDELRTLRTKVKCLEDERLR 514
Cdd:PRK01156 420 DISSKVSS-----LNQRIRALRENLDELSRNMEMLNGQSVcpvcgttlGEEKSNHIINHYNEKKSRLEEKIREIEIEVKD 494

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  515 TEDELSKYKEIINR-QKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQK-DIEGSR-KRESELLLF 591
Cdd:PRK01156 495 IDEKIVDLKKRKEYlESEEINKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSlKLEDLDsKRTSWLNAL 574

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  592 TERLTSKNAQLQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEELRKEEVQTLQAELACRQT---EVKA 668
Cdd:PRK01156 575 AVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKlrgKIDN 654

                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*...
gi 36031016  669 LSTQVEElKDELVTQRRKHASSIKDLTKQLQQARRKLDQVESGSYDKE 716
Cdd:PRK01156 655 YKKQIAE-IDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLE 701

PTZ00121

MAEBL; Provisional

121-411

2.43e-04

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.13 E-value: 2.43e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   121 ELRSSTFPESANEKTYSESPYDTDCTKKFISKIKS---VSASEDLLEEIESELLSTEFAEHRVPNGMNKGEHALVLFEKC 197
Cdd:PTZ00121 1514 EAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKAdelKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEAR 1593

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   198 VQDKYLQQEHIIKKLIKENKKHQElfVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDV 277
Cdd:PTZ00121 1594 IEEVMKLYEEEKKMKAEEAKKAEE--AKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAE 1671

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   278 TAKNAVQQLHK--EMAQRMEQANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQ 355
Cdd:PTZ00121 1672 EDKKKAEEAKKaeEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKK 1751

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 36031016   356 EKGRLHQLYETKEGETTRlIREIDKLKEDinshVIKVKWAQNKLKAEMDSHKETKD 411
Cdd:PTZ00121 1752 DEEEKKKIAHLKKEEEKK-AEEIRKEKEA----VIEEELDEEDEKRRMEVDKKIKD 1802

COG4913

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

260-568

2.71e-04

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 2.71e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  260 ELNKEVKASRDQLIAQDVTAK-NAVQQLHKEMAQRMEQANKKCEEARQEKEAM---------VMKYVRGEKESLDLRKEK 329
Cdd:COG4913  591 EKDDRRRIRSRYVLGFDNRAKlAALEAELAELEEELAEAEERLEALEAELDALqerrealqrLAEYSWDEIDVASAEREI 670

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  330 ETLEKKLRdankELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAemdshkET 409
Cdd:COG4913  671 AELEAELE----RLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEA------AE 740

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  410 KDKLKETTTKLTQAKEEADQiRKNCQDMIKTYQESEEiksnELDAKLRVTKGELEKQMQEKSDQLEMhhakikELEDLkR 489
Cdd:COG4913  741 DLARLELRALLEERFAAALG-DAVERELRENLEERID----ALRARLNRAEEELERAMRAFNREWPA------ETADL-D 808

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  490 TFKEGMDELRTLRTKvkcLEDERL-RTEDELSKYkeiinRQKAEIQNLLDkvktadqLQEQLqrgKQEIENLKEEVESLN 568
Cdd:COG4913  809 ADLESLPEYLALLDR---LEEDGLpEYEERFKEL-----LNENSIEFVAD-------LLSKL---RRAIREIKERIDPLN 870

SCP-1

pfam05483

Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ...

288-687

2.91e-04

Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.

Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 44.71 E-value: 2.91e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   288 KEMAQRMEQANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETK 367
Cdd:pfam05483 109 QENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDL 188

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   368 EGETTRLIREIDKLKEDINSHVI----KVKWAQNKLK-AEMDSHKETKDKLKETTTKLTQAKEEADQIRkncqDMIKTYQ 442
Cdd:pfam05483 189 NNNIEKMILAFEELRVQAENARLemhfKLKEDHEKIQhLEEEYKKEINDKEKQVSLLLIQITEKENKMK----DLTFLLE 264

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   443 ESEEiKSNELDAKLRVTKGELeKQMQEKSDQLemhhakIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKY 522
Cdd:pfam05483 265 ESRD-KANQLEEKTKLQDENL-KELIEKKDHL------TKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQ 336

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   523 KEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEieNLKEEVESLNSLINDLQKdiegsrkRESELLLFTERLTSKNAQL 602
Cdd:pfam05483 337 MEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQ--RLEKNEDQLKIITMELQK-------KSSELEEMTKFKNNKEVEL 407

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   603 QsESNSLQSQFDKVSCSESQLQSQCEQMKQTninlESRLLKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKDELVT 682
Cdd:pfam05483 408 E-ELKKILAEDEKLLDEKKQFEKIAEELKGK----EQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEK 482


                  ....*
gi 36031016   683 QRRKH 687
Cdd:pfam05483 483 EKLKN 487

PRK00409

recombination and DNA strand exchange inhibitor protein; Reviewed

235-356

3.22e-04

recombination and DNA strand exchange inhibitor protein; Reviewed

Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 44.43 E-value: 3.22e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  235 EELKKRTETEKQHmntIKQLESRIEELNKEVKasrDQLIAQDVTAKNAVQQLHKEmaqrmeqANKKCEEARQEKEAMVMK 314
Cdd:PRK00409 526 EELERELEQKAEE---AEALLKEAEKLKEELE---EKKEKLQEEEDKLLEEAEKE-------AQQAIKEAKKEADEIIKE 592

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 36031016  315 YVRGEKESLDLRKEKETLE--KKLRDANKELEKNTNKIKQLSQE 356
Cdd:PRK00409 593 LRQLQKGGYASVKAHELIEarKRLNKANEKKEKKKKKQKEKQEE 636

sbcc

TIGR00618

exonuclease SbcC; All proteins in this family for which functions are known are part of an ...

208-709

3.63e-04

Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.57 E-value: 3.63e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    208 IIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQH---------MNTIKQLESRIEELNKEVKASRDQLIAQdvt 278
Cdd:TIGR00618  298 HIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQssieeqrrlLQTLHSQEIHIRDAHEVATSIREISCQQ--- 374

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    279 aKNAVQQLHKeMAQRMEQANKKCEEARQEKEamVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQL-SQEK 357
Cdd:TIGR00618  375 -HTLTQHIHT-LQQQKTTLTQKLQSLCKELD--ILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAaITCT 450

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    358 GRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDM 437
Cdd:TIGR00618  451 AQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRM 530

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    438 IKTyqESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTED 517
Cdd:TIGR00618  531 QRG--EQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAED 608

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    518 ELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGK-----QEIENLKEEVESLNSLINDLQKDIEGSRKRE------- 585
Cdd:TIGR00618  609 MLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLtalhaLQLTLTQERVREHALSIRVLPKELLASRQLAlqkmqse 688

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    586 -SELLLFTERLTSKNAQLQSESNSLQS---QFDKVSCSESQLQSQCEQMKQTNINLESRLLKEEELRKEEVQTLQAELAC 661
Cdd:TIGR00618  689 kEQLTYWKEMLAQCQTLLRELETHIEEydrEFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNE 768

                          490       500       510       520
                   ....*....|....*....|....*....|....*....|....*...
gi 36031016    662 RQTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQVE 709
Cdd:TIGR00618  769 EVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDE 816

DR0291

COG1579

Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ...

482-633

4.15e-04

Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];

Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.99 E-value: 4.15e-04

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 482 KELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQ------ 555
Cdd:COG1579  17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyealqk 96

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 36031016 556 EIENLKEEVESLNSLINDLQKDIEGSRKRESELllfTERLTSKNAQLQSESNSLQSQFDKVSCSESQLQSQCEQMKQT 633
Cdd:COG1579  97 EIESLKRRISDLEDEILELMERIEELEEELAEL---EAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAK 171

PRK02224

DNA double-strand break repair Rad50 ATPase;

319-590

4.50e-04

DNA double-strand break repair Rad50 ATPase;

Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 44.26 E-value: 4.50e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  319 EKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQL---YETKEGETTRLIREIDKLKEDInshvikvkwa 395
Cdd:PRK02224 198 EKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVleeHEERREELETLEAEIEDLRETI---------- 267

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  396 qnklkAEMDSHKET-KDKLKETTTKLTQAKEEADQIRKNCqDMIKTYQESEEIKSNELDAKlrvtKGELEKQMQEKSDQL 474
Cdd:PRK02224 268 -----AETEREREElAEEVRDLRERLEELEEERDDLLAEA-GLDDADAEAVEARREELEDR----DEELRDRLEECRVAA 337

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  475 EMHHAKIKELEDLKRTFKEGMDElrtLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADqlqEQLQRGK 554
Cdd:PRK02224 338 QAHNEEAESLREDADDLEERAEE---LREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAP---VDLGNAE 411

                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 36031016  555 QEIENLKEEVESLNSLINDLQKDIEGSRKR--ESELLL 590
Cdd:PRK02224 412 DFLEELREERDELREREAELEATLRTARERveEAEALL 449

PspC_subgroup_1

NF033838

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...

242-563

5.10e-04

Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 43.85 E-value: 5.10e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  242 ETEKQHMNTIKQ-LESRIEELNKEVKASRDqliAQDVTAKNAVQQLHKEMAQRMEQANKKCE-----EARQEKEAMVMKY 315
Cdd:NF033838  54 ESQKEHAKEVEShLEKILSEIQKSLDKRKH---TQNVALNKKLSDIKTEYLYELNVLKEKSEaeltsKTKKELDAAFEQF 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  316 ----VRGEKESLDLRKEKETLEKKLRDANKELEKN--TNKIKQLSQEKGRLHqlYETKEGETtrlirEIDKLKEDINSHV 389
Cdd:NF033838 131 kkdtLEPGKKVAEATKKVEEAEKKAKDQKEEDRRNypTNTYKTLELEIAESD--VEVKKAEL-----ELVKEEAKEPRDE 203

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  390 IKVKWAqnklKAEMDSHKETKDKLKETTTKLTQAKEEADQIrknCQDMIKTYQESEEIKSNELDAKLRVTKGEL------ 463
Cdd:NF033838 204 EKIKQA----KAKVESKKAEATRLEKIKTDREKAEEEAKRR---ADAKLKEAVEKNVATSEQDKPKRRAKRGVLgepatp 276

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  464 --------------------------EKQMQEKSDQLEMHHAKIKELEDLKR------TFKEGMDELRTLRTKVKCLEDE 511
Cdd:NF033838 277 dkkendakssdssvgeetlpspslkpEKKVAEAEKKVEEAKKKAKDQKEEDRrnyptnTYKTLELEIAESDVKVKEAELE 356

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 36031016  512 RLRTEDELSKYKEIINRQKAEIQN------LLDKVKT-ADQLQEQLQRGKQEIENLKEE 563
Cdd:NF033838 357 LVKEEAKEPRNEEKIKQAKAKVESkkaeatRLEKIKTdRKKAEEEAKRKAAEEDKVKEK 415

COG2433

Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];

454-595

5.30e-04

Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];

Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.69 E-value: 5.30e-04

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 454 AKLRVTKGE-----LEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGmdELRTLRTKVKCLEDERlrteDELskyKEIINR 528
Cdd:COG2433 368 VKARVIRGLsieeaLEELIEKELPEEEPEAEREKEHEERELTEEEE--EIRRLEEQVERLEAEV----EEL---EAELEE 438

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 36031016 529 QKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLnslindlQKDIEGSRKRESELLLFTERL 595
Cdd:COG2433 439 KDERIERLERELSEARSEERREIRKDREISRLDREIERL-------ERELEEERERIEELKRKLERL 498

CCDC158

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...

391-771

5.41e-04

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.

Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 43.95 E-value: 5.41e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    391 KVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEiksnELDAKLRVTKGELEKQMQEK 470
Cdd:pfam15921   86 QVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQE----DLRNQLQNTVHELEAAKCLK 161

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    471 SDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKY---------KEIINRQKAEIQNLLDKV- 540
Cdd:pfam15921  162 EDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMhfrslgsaiSKILRELDTEISYLKGRIf 241

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    541 KTADQLQEQLQRGKQEIE-NLKEEVESLNSLINDLQKDIEGsrkreselllfterLTSKNAQLQSESNSLQSQFDKVScs 619
Cdd:pfam15921  242 PVEDQLEALKSESQNKIElLLQQHQDRIEQLISEHEVEITG--------------LTEKASSARSQANSIQSQLEIIQ-- 305

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    620 esqlqsqcEQMKQTNinlesrllkeeelrkeevqtlqaelACRQTEVKALSTQVEELKDELVTQRRKHASSIKDLTKQ-- 697
Cdd:pfam15921  306 --------EQARNQN-------------------------SMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQlv 352

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    698 -----LQQARRKLDQV--ESGSYDKEVSSMGSRSSSSGSLNARSSAEDRS--PENTGSSVAVDNFPQV--DKAMLIERIV 766
Cdd:pfam15921  353 lanseLTEARTERDQFsqESGNLDDQLQKLLADLHKREKELSLEKEQNKRlwDRDTGNSITIDHLRREldDRNMEVQRLE 432


                   ....*
gi 36031016    767 RLQKA 771
Cdd:pfam15921  433 ALLKA 437

PRK00409

recombination and DNA strand exchange inhibitor protein; Reviewed

339-499

6.21e-04

recombination and DNA strand exchange inhibitor protein; Reviewed

Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 43.66 E-value: 6.21e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  339 ANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMdsHKETKDKLKEttt 418
Cdd:PRK00409 507 AKKLIGEDKEKLNELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEA--EKEAQQAIKE--- 581

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  419 kltqAKEEADQIRKNCQDMIKtyQESEEIKSNELDAKLRvtkgELEKQMQEKSdqlemhhAKIKELEDLKRTFKEGmDEL 498
Cdd:PRK00409 582 ----AKKEADEIIKELRQLQK--GGYASVKAHELIEARK----RLNKANEKKE-------KKKKKQKEKQEELKVG-DEV 643


                 .
gi 36031016  499 R 499
Cdd:PRK00409 644 K 644

COG4913

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

419-584

6.50e-04

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 6.50e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  419 KLTQAKEEADQIRKNCQDMIKTYQESEEIKsNELDAKLRVTKGELEKQMQEksDQLEMHHAKIKELEDLKRTFKEGMDEL 498
Cdd:COG4913  611 KLAALEAELAELEEELAEAEERLEALEAEL-DALQERREALQRLAEYSWDE--IDVASAEREIAELEAELERLDASSDDL 687

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  499 RTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQL----------------------QRGKQE 556
Cdd:COG4913  688 AALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAedlarlelralleerfaaalgdAVEREL 767

                        170       180
                 ....*....|....*....|....*...
gi 36031016  557 IENLKEEVESLNSLINDLQKDIEGSRKR 584
Cdd:COG4913  768 RENLEERIDALRARLNRAEEELERAMRA 795

GumC

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

239-445

7.23e-04

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 7.23e-04

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 239 KRTETEKqhmnTIKQLESRIEELNKEVKASRDQL---------IAQDVTAKNAVQQLhKEMAQRMEQANKKCEEARQEKE 309
Cdd:COG3206 169 RREEARK----ALEFLEEQLPELRKELEEAEAALeefrqknglVDLSEEAKLLLQQL-SELESQLAEARAELAEAEARLA 243

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 310 AM---------VMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQlyetkegettRLIREIDK 380
Cdd:COG3206 244 ALraqlgsgpdALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRA----------QLQQEAQR 313

                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 36031016 381 LKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESE 445
Cdd:COG3206 314 ILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEAR 378

Myosin_tail_1

pfam01576

Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ...

204-605

8.01e-04

Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.

Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 43.24 E-value: 8.01e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    204 QQEHIIKKLIKENKKHQELFVDIcseKDNLREELKKRTETEK---QHMNTIKQLESRIEELNKEVKASRDQLIAQDVTAK 280
Cdd:pfam01576  170 EEEEKAKSLSKLKNKHEAMISDL---EERLKKEEKGRQELEKakrKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQ 246

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    281 NAVQQLHKEMAQRMEQANKKCE------EARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRD------ANKEL----E 344
Cdd:pfam01576  247 AALARLEEETAQKNNALKKIREleaqisELQEDLESERAARNKAEKQRRDLGEELEALKTELEDtldttaAQQELrskrE 326

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    345 KNTNKIKQLSQEKGRLH--QLYETKEGETTRLIREIDKLKediNSHVIKVKWAQNKLKAEMDShketkDKLKETTTKLTQ 422
Cdd:pfam01576  327 QEVTELKKALEEETRSHeaQLQEMRQKHTQALEELTEQLE---QAKRNKANLEKAKQALESEN-----AELQAELRTLQQ 398

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    423 AKEEADQIRK----NCQDMIKTYQESEEIKsNELDAKLRVTKGELE------KQMQEKSDQLEMHHAKIK-ELEDLKRTF 491
Cdd:pfam01576  399 AKQDSEHKRKklegQLQELQARLSESERQR-AELAEKLSKLQSELEsvssllNEAEGKNIKLSKDVSSLEsQLQDTQELL 477

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    492 KEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLldkvktadqlQEQLQRGKQEIENLKEEVESLNSLI 571
Cdd:pfam01576  478 QEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTL----------QAQLSDMKKKLEEDAGTLEALEEGK 547

                          410       420       430
                   ....*....|....*....|....*....|....
gi 36031016    572 NDLQKDIEGSRKRESELLLFTERLTSKNAQLQSE 605
Cdd:pfam01576  548 KRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQE 581

COG1340

Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];

302-588

8.27e-04

Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];

Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 42.59 E-value: 8.27e-04

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 302 EEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKgrlhqlyetkegetTRLIREIDKL 381
Cdd:COG1340  11 EELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKR--------------DELNEKVKEL 76

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 382 KEDinshvikvkwaQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESeeiksneldaklrVTKG 461
Cdd:COG1340  77 KEE-----------RDELNEKLNELREELDELRKELAELNKAGGSIDKLRKEIERLEWRQQTE-------------VLSP 132

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 462 ELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLldkVK 541
Cdd:COG1340 133 EEEKELVEKIKELEKELEKAKKALEKNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKEADEL---RK 209

                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 36031016 542 TADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESEL 588
Cdd:COG1340 210 EADELHKEIVEAQEKADELHEEIIELQKELRELRKELKKLRKKQRAL 256

GumC

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

319-579

9.42e-04

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 9.42e-04

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 319 EKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEkgrlHQLYETkEGETTRLIREIDKLKEDINshvikvkwaqnk 398
Cdd:COG3206 167 ELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQK----NGLVDL-SEEAKLLLQQLSELESQLA------------ 229

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 399 lkaemdshketkdklkETTTKLTQAKEEADQIRKNcqdMIKTYQESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHH 478
Cdd:COG3206 230 ----------------EARAELAEAEARLAALRAQ---LGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNH 290

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 479 AKIKELEdlkrtfkegmDELRTLRTKvkcLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKtadQLQEQLQRGKQEIE 558
Cdd:COG3206 291 PDVIALR----------AQIAALRAQ---LQQEAQRILASLEAELEALQAREASLQAQLAQLE---ARLAELPELEAELR 354

                       250       260
                ....*....|....*....|.
gi 36031016 559 NLKEEVESLNSLINDLQKDIE 579
Cdd:COG3206 355 RLEREVEVARELYESLLQRLE 375

PRK11281

mechanosensitive channel MscK;

517-710

9.50e-04

mechanosensitive channel MscK;

Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.98 E-value: 9.50e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   517 DELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRG---KQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTE 593
Cdd:PRK11281   46 DALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETeqlKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLSLRQ 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   594 ---RLTSKNAQLQ------SESNS----LQSQFDKVscsESQLQSQCEQMKQTNINLESRLLKEEELRKEEVQTLQAELA 660
Cdd:PRK11281  126 lesRLAQTLDQLQnaqndlAEYNSqlvsLQTQPERA---QAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQA 202

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 36031016   661 C-------RQTEVKAlSTQVEEL----KDELVTQRRKHASSIKDL-----TKQLQQARRKLDQVES 710
Cdd:PRK11281  203 LlnaqndlQRKSLEG-NTQLQDLlqkqRDYLTARIQRLEHQLQLLqeainSKRLTLSEKTVQEAQS 267

COG5022

Myosin heavy chain [General function prediction only];

401-611

1.03e-03

Myosin heavy chain [General function prediction only];

Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 43.14 E-value: 1.03e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  401 AEMDSHKETKDKLKETTTKLTQAKEEADQIRK-NCQDMIKTYQESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHA 479
Cdd:COG5022  810 KEYRSYLACIIKLQKTIKREKKLRETEEVEFSlKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVELAERQLQELKI 889

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  480 KIKELEDLKRTFKEgmDELRTLRTKVKCLEDERLRTE---DELSKYKEIINRQKAEIQNLLDKVKtadqlQEQLQRGKQE 556
Cdd:COG5022  890 DVKSISSLKLVNLE--LESEIIELKKSLSSDLIENLEfktELIARLKKLLNNIDLEEGPSIEYVK-----LPELNKLHEV 962

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 36031016  557 IENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSESNSLQS 611
Cdd:COG5022  963 ESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQ 1017

YhaN

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

325-711

1.10e-03

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 1.10e-03

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 325 LRKEKETLEK----KLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEG---ETTRLIREIDKLKEDINSHVIKVKWAQN 397
Cdd:COG4717  51 LEKEADELFKpqgrKPELNLKELKELEEELKEAEEKEEEYAELQEELEEleeELEELEAELEELREELEKLEKLLQLLPL 130

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 398 KLKAEmdshkETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKsNELDAKLRVTKGELEKQMQEKSDQLEMH 477
Cdd:COG4717 131 YQELE-----ALEAELAELPERLEELEERLEELRELEEELEELEAELAELQ-EELEELLEQLSLATEEELQDLAEELEEL 204

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 478 HAKIKELEDLKRTFKEgmdELRTLRTKVKCLEDERLRTEDE--------------------------------------- 518
Cdd:COG4717 205 QQRLAELEEELEEAQE---ELEELEEELEQLENELEAAALEerlkearlllliaaallallglggsllsliltiagvlfl 281

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 519 ----LSKYKEIINRQKAEIQNLLDKVKTAD--------QLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRES 586
Cdd:COG4717 282 vlglLALLFLLLAREKASLGKEAEELQALPaleeleeeELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEE 361

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 587 ELLLfterltsknAQLQSESNSLQSQFDkvSCSESQLQSQCEQmKQTNINLESRLLKEEELRKEEVQTLQAELACRQTEv 666
Cdd:COG4717 362 ELQL---------EELEQEIAALLAEAG--VEDEEELRAALEQ-AEEYQELKEELEELEEQLEELLGELEELLEALDEE- 428

                       410       420       430       440
                ....*....|....*....|....*....|....*....|....*
gi 36031016 667 kalstQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQVESG 711
Cdd:COG4717 429 -----ELEEELEELEEELEELEEELEELREELAELEAELEQLEED 468

CwlO1

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ...

328-558

1.11e-03

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];

Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 1.11e-03

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 328 EKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHK 407
Cdd:COG3883  17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY 96

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 408 ETKDKLKETTTkLTQAKEEADQIRKncQDMIKTYQESEeiksNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDL 487
Cdd:COG3883  97 RSGGSVSYLDV-LLGSESFSDFLDR--LSALSKIADAD----ADLLEELKADKAELEAKKAELEAKLAELEALKAELEAA 169

                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 36031016 488 KRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIE 558
Cdd:COG3883 170 KAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 240

ClpA

COG0542

ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ...

251-351

1.27e-03

ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];

Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 42.76 E-value: 1.27e-03

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 251 IKQLESRIEELNKEvkasRDQLIA-QDVTAKNAVQQLHKEMAQRMEQANKKceEARQEKEAMVMKYVRGEKESLDLRKEK 329
Cdd:COG0542 413 LDELERRLEQLEIE----KEALKKeQDEASFERLAELRDELAELEEELEAL--KARWEAEKELIEEIQELKEELEQRYGK 486

                        90       100
                ....*....|....*....|...
gi 36031016 330 E-TLEKKLRDANKELEKNTNKIK 351
Cdd:COG0542 487 IpELEKELAELEEELAELAPLLR 509

SMC_N

pfam02463

RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ...

280-611

1.41e-03

Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 42.65 E-value: 1.41e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    280 KNAVQQLHKEMAQRMEQANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGR 359
Cdd:pfam02463  172 KEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQE 251

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    360 LHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIK 439
Cdd:pfam02463  252 EIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELK 331

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    440 TYQESEEIKSNELDAKLRvTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTEDEL 519
Cdd:pfam02463  332 KEKEEIEELEKELKELEI-KREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLL 410

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    520 SKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQ-KDIEGSRKRESELLLFTERLTSK 598
Cdd:pfam02463  411 LELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELElKKSEDLLKETQLVKLQEQLELLL 490

                          330
                   ....*....|...
gi 36031016    599 NAQLQSESNSLQS 611
Cdd:pfam02463  491 SRQKLEERSQKES 503

COG4913

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

462-588

1.44e-03

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 1.44e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  462 ELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLrtkvkcleDERLRTEDELSKYKEIINRQKAEIQNLLDKVK 541
Cdd:COG4913  614 ALEAELAELEEELAEAEERLEALEAELDALQERREALQRL--------AEYSWDEIDVASAEREIAELEAELERLDASSD 685

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 36031016  542 TADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESEL 588
Cdd:COG4913  686 DLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDEL 732

PRK10929

putative mechanosensitive channel protein; Provisional

518-705

1.51e-03

putative mechanosensitive channel protein; Provisional

Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 42.35 E-value: 1.51e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   518 ELSKYKEIINRQKAEI-------QNLLDKVKTADQLQEQLQRG-----------KQEIENLKEEVESL--NSLINDLqkd 577
Cdd:PRK10929   31 ELEQAKAAKTPAQAEIvealqsaLNWLEERKGSLERAKQYQQVidnfpklsaelRQQLNNERDEPRSVppNMSTDAL--- 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   578 iegsrkrESELLLFTERLTSKNAQLQSEsnslQSQFDKVSCSESQL-QSQCEQMKQTNinlesrllkeeeLRKEEVQTL- 655
Cdd:PRK10929  108 -------EQEILQVSSQLLEKSRQAQQE----QDRAREISDSLSQLpQQQTEARRQLN------------EIERRLQTLg 164

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 36031016   656 -------QAELACRQTEVKALSTQVEEL---------KDEL------VTQRRKHassikDLTKQLQQARRKL 705
Cdd:PRK10929  165 tpntplaQAQLTALQAESAALKALVDELelaqlsannRQELarlrseLAKKRSQ-----QLDAYLQALRNQL 231

COG4913

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

231-712

1.64e-03

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 1.64e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  231 DNLREELKKrteTEKQhmntIKQLEsRIEELNKEVKASRDQLIAQDvTAKNAVQQLHKEmaQRMEQANKKCEEARQEKEa 310
Cdd:COG4913  238 ERAHEALED---AREQ----IELLE-PIRELAERYAAARERLAELE-YLRAALRLWFAQ--RRLELLEAELEELRAELA- 305

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  311 mvmkyvRGEKESLDLRKEKETLEKKLRDANKELEKN-TNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHV 389
Cdd:COG4913  306 ------RLEAELERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASA 379

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  390 IKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESeeiKSNeLDAKLRVTKGELEKQMQE 469
Cdd:COG4913  380 EEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERR---KSN-IPARLLALRDALAEALGL 455

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  470 KSDQLEMhhakIKELEDLKRTFK------EGMdeLRTLRT----------KV-KCLEDERLRTE---DELSKYKEIINRQ 529
Cdd:COG4913  456 DEAELPF----VGELIEVRPEEErwrgaiERV--LGGFALtllvppehyaAAlRWVNRLHLRGRlvyERVRTGLPDPERP 529

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  530 KAEIQNLLDKVKTAD---------QLQ-----------EQLQRG-----------------------------------K 554
Cdd:COG4913  530 RLDPDSLAGKLDFKPhpfrawleaELGrrfdyvcvdspEELRRHpraitragqvkgngtrhekddrrrirsryvlgfdnR 609

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  555 QEIENLKEEVESLNSLINDLQKDIEGSRKREselllftERLTSKNAQLQSESNSLQSQFDKVSCSE--SQLQSQCEQMKQ 632
Cdd:COG4913  610 AKLAALEAELAELEEELAEAEERLEALEAEL-------DALQERREALQRLAEYSWDEIDVASAEReiAELEAELERLDA 682

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  633 TNinlesrllkeeelrkEEVQTLQAELACRQTEVKALstqvEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQVESGS 712
Cdd:COG4913  683 SS---------------DDLAALEEQLEELEAELEEL----EEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLA 743

rad50

TIGR00606

rad50; All proteins in this family for which functions are known are involvedin recombination, ...

229-542

1.64e-03

Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 42.34 E-value: 1.64e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    229 EKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLiaQDVTAKNAVQQLHKEMAQRMEQANKKCE------ 302
Cdd:TIGR00606  745 EIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCL--TDVTIMERFQMELKDVERKIAQQAAKLQgsdldr 822

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    303 ---EARQEKEAMVMKYVRGEKESLDLRK---EKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIR 376
Cdd:TIGR00606  823 tvqQVNQEKQEKQHELDTVVSKIELNRKliqDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIR 902

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    377 EIDKLKEDINSHVIKVKWAQNKlKAEMDSHKETKDKLKEttTKLTQAKEEADQIRKNCQDMIKTYQESEE----IKSNEL 452
Cdd:TIGR00606  903 EIKDAKEQDSPLETFLEKDQQE-KEELISSKETSNKKAQ--DKVNDIKEKVKNIHGYMKDIENKIQDGKDdylkQKETEL 979

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    453 dAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMdELRTLRTKVKCLEDERLRTEDELSKYKeiINRQKAE 532
Cdd:TIGR00606  980 -NTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNL-TLRKRENELKEVEEELKQHLKEMGQMQ--VLQMKQE 1055

                          330
                   ....*....|
gi 36031016    533 IQNLLDKVKT 542
Cdd:TIGR00606 1056 HQKLEENIDL 1065

EnvC

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...

198-385

1.94e-03

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 1.94e-03

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 198 VQDKYLQQEHIIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQL----- 272
Cdd:COG4942  32 LQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELaellr 111

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 273 -------------------IAQDVTAKNAVQQLHKEMAQRMEQANKKCEEARQEKEAMvmkyvrgEKESLDLRKEKETLE 333
Cdd:COG4942 112 alyrlgrqpplalllspedFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL-------EAERAELEALLAELE 184

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 36031016 334 KKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDI 385
Cdd:COG4942 185 EERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236

GumC

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

508-708

2.39e-03

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.54 E-value: 2.39e-03

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 508 LEDERLRTEDELSKYKEIINRQKAEIQNLLDkvktadQLQEQLQRGKQE--IENLKEEVESLNSLINDLQKDIEGSRKRE 585
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELE------EAEAALEEFRQKngLVDLSEEAKLLLQQLSELESQLAEARAEL 235

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 586 SELllfTERLTSKNAQLQSESNSLQSQFDkvscsESQLQSQCEQMKQTNINLeSRLLKEEELRKEEVQTLQAELAcrqtE 665
Cdd:COG3206 236 AEA---EARLAALRAQLGSGPDALPELLQ-----SPVIQQLRAQLAELEAEL-AELSARYTPNHPDVIALRAQIA----A 302

                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 36031016 666 VKA-LSTQVEELKDELVTQRRKHASSIKDLTKQLQQARRKLDQV 708
Cdd:COG3206 303 LRAqLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAEL 346

PRK04778

septation ring formation regulator EzrA; Provisional

220-579

2.53e-03

septation ring formation regulator EzrA; Provisional

Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 41.36 E-value: 2.53e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  220 QELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLiaqdvtaKNAVQQLHKEMAQrMEQANK 299
Cdd:PRK04778 111 ESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRELRKSLLANRFSF-------GPALDELEKQLEN-LEEEFS 182

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  300 KCEEARQEKEamvmkYVRGEKESLDLRKEKETLEKK-------LRDANKELEKNTNKIK----QLSQEKGRLHQLyeTKE 368
Cdd:PRK04778 183 QFVELTESGD-----YVEAREILDQLEEELAALEQImeeipelLKELQTELPDQLQELKagyrELVEEGYHLDHL--DIE 255

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  369 GETTRLIREIDKLKEDINShvIKVKWAQNKLKA--------------EMDSHKETKDKLKETTTKLTQAKEEADQIRKNC 434
Cdd:PRK04778 256 KEIQDLKEQIDENLALLEE--LDLDEAEEKNEEiqeridqlydilerEVKARKYVEKNSDTLPDFLEHAKEQNKELKEEI 333

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  435 QDMIKTYQ--ESEEIKSNELDAKLRvtkgELEKQMQEKSDQLEMHHAK----IKELEDLKRTFKEGMDELRTLRTKVKCL 508
Cdd:PRK04778 334 DRVKQSYTlnESELESVRQLEKQLE----SLEKQYDEITERIAEQEIAyselQEELEEILKQLEEIEKEQEKLSEMLQGL 409

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  509 EDERLRTEDELSKYKEIIN--RQKAEIQNL-------LDKVKTAD----QLQEQLQRGKQEIENLKEEVESLNSLINDLQ 575
Cdd:PRK04778 410 RKDELEAREKLERYRNKLHeiKRYLEKSNLpglpedyLEMFFEVSdeieALAEELEEKPINMEAVNRLLEEATEDVETLE 489


                 ....
gi 36031016  576 KDIE 579
Cdd:PRK04778 490 EETE 493

PLN02939

transferase, transferring glycosyl groups

327-541

2.69e-03

transferase, transferring glycosyl groups

Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.43 E-value: 2.69e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  327 KEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIK---VKWAQNKLKAEM 403
Cdd:PLN02939 163 TEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKEldvLKEENMLLKDDI 242

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  404 DSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEE--------------IKSNELDAKLRVTKGELEK---- 465
Cdd:PLN02939 243 QFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEdvsklsplqydcwwEKVENLQDLLDRATNQVEKaalv 322

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 36031016  466 --QMQEKSDQLEMHHAKIKEledlKRTFKEGMDELRTLRTKVKCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVK 541
Cdd:PLN02939 323 ldQNQDLRDKVDKLEASLKE----ANVSKFSSYKVELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLK 396

Spc7

smart00787

Spc7 kinetochore protein; This domain is found in cell division proteins which are required ...

467-607

3.30e-03

Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.

Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 40.77 E-value: 3.30e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016    467 MQEKSDQLEMHHAKIKEL-EDLKRTFKEGMDELRTLRTKVKCLEDERlrtEDELSKYKEIINRQKAEIQNLLDKVktaDQ 545
Cdd:smart00787 156 LKEDYKLLMKELELLNSIkPKLRDRKDALEEELRQLKQLEDELEDCD---PTELDRAKEKLKKLLQEIMIKVKKL---EE 229

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 36031016    546 LQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRK-RESELllftERLTSKNAQLQSESN 607
Cdd:smart00787 230 LEEELQELESKIEDLTNKKSELNTEIAEAEKKLEQCRGfTFKEI----EKLKEQLKLLQSLTG 288

SCP-1

pfam05483

Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ...

208-731

3.44e-03

Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 41.25 E-value: 3.44e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   208 IIKKLIKENKKHQELFVDICSE---KDNLREELKKRTETEKQHMNTIkQLESRIEELNKEVKASRDQLIAQDVTAKNAVQ 284
Cdd:pfam05483  79 LYSKLYKEAEKIKKWKVSIEAElkqKENKLQENRKIIEAQRKAIQEL-QFENEKVSLKLEEEIQENKDLIKENNATRHLC 157

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   285 QLHKEMAQRMEQANKKCEEARQEKEAMVMKYVRG-EKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEkgrLHQL 363
Cdd:pfam05483 158 NLLKETCARSAEKTKKYEYEREETRQVYMDLNNNiEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEE---YKKE 234

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   364 YETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQE 443
Cdd:pfam05483 235 INDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKA 314

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   444 SEEIKSNELDAKLRVTKgELEKQMQEKSDQLEMHHAKIKELE----DLKRTFKEGMDELRTLRTKVKCLEDERLRTEDEL 519
Cdd:pfam05483 315 LEEDLQIATKTICQLTE-EKEAQMEELNKAKAAHSFVVTEFEattcSLEELLRTEQQRLEKNEDQLKIITMELQKKSSEL 393

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   520 SKYKEIINRQKAEIQNLldkvKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLqkdIEGSRKRESELLLFTERLTSKN 599
Cdd:pfam05483 394 EEMTKFKNNKEVELEEL----KKILAEDEKLLDEKKQFEKIAEELKGKEQELIFL---LQAREKEIHDLEIQLTAIKTSE 466

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016   600 AQLQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLesrlLKEEELRKEEVQTLQAELACRQTEVKALSTQVEELKDE 679
Cdd:pfam05483 467 EHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKEL----TQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEK 542

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|..
gi 36031016   680 LVTQRRKHASSIKDLTKQLQQARRKLDQVESGSYDKEVSSMGSRSSSSGSLN 731
Cdd:pfam05483 543 EMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILEN 594

CwlO1

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ...

377-612

3.57e-03

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];

Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.58 E-value: 3.57e-03

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 377 EIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNcqdmIKTYQESEEIKSNELDAKL 456
Cdd:COG3883  17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAE----IAEAEAEIEERREELGERA 92

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 457 RVTK------------------GELEKQMQEKSDQLEMHHAKIKELEDLKrtfkegmDELRTLRTKVKCLEDERLRTEDE 518
Cdd:COG3883  93 RALYrsggsvsyldvllgsesfSDFLDRLSALSKIADADADLLEELKADK-------AELEAKKAELEAKLAELEALKAE 165

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 519 LSKYKEIINRQKAEIQNLLdkvktaDQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSK 598
Cdd:COG3883 166 LEAAKAELEAQQAEQEALL------AQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 239

                       250
                ....*....|....
gi 36031016 599 NAQLQSESNSLQSQ 612
Cdd:COG3883 240 AAAAASAAGAGAAG 253

PRK00106

ribonuclease Y;

203-372

3.57e-03

ribonuclease Y;

Pssm-ID: 178867 [Multi-domain] Cd Length: 535 Bit Score: 41.01 E-value: 3.57e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  203 LQQEHIIKKLIKENKKHQ-ELFVDICSEKDNLREELKKRTETEKQHMntiKQLESRIEELNKEVKASRDQLIAQDVTAKN 281
Cdd:PRK00106  53 RDAEHIKKTAKRESKALKkELLLEAKEEARKYREEIEQEFKSERQEL---KQIESRLTERATSLDRKDENLSSKEKTLES 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  282 AVQQL---HKEMAQRMEQAnKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEK----KLRDANKELEKNTNKIKQ-- 352
Cdd:PRK00106 130 KEQSLtdkSKHIDEREEQV-EKLEEQKKAELERVAALSQAEAREIILAETENKLTHeiatRIREAEREVKDRSDKMAKdl 208

                        170       180
                 ....*....|....*....|
gi 36031016  353 LSQEKGRLHQLYETKEGETT 372
Cdd:PRK00106 209 LAQAMQRLAGEYVTEQTITT 228

GumC

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

534-710

3.66e-03

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 3.66e-03

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 534 QNLLDKVKTADQLQEQLQrgkQEIENLKEEVESLNSLINDLQKDiEGSRKRESELLLFTERLTSKNAQL---QSESNSLQ 610
Cdd:COG3206 164 QNLELRREEARKALEFLE---EQLPELRKELEEAEAALEEFRQK-NGLVDLSEEAKLLLQQLSELESQLaeaRAELAEAE 239

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 611 SQFDKVscsESQLQSQCEQMKQTninLESRLLKEEELRKEEVQTLQAELACRQTE----VKALSTQVEELKDELVTQRRK 686
Cdd:COG3206 240 ARLAAL---RAQLGSGPDALPEL---LQSPVIQQLRAQLAELEAELAELSARYTPnhpdVIALRAQIAALRAQLQQEAQR 313

                       170       180
                ....*....|....*....|....*...
gi 36031016 687 HASSIKD----LTKQLQQARRKLDQVES 710
Cdd:COG3206 314 ILASLEAeleaLQAREASLQAQLAQLEA 341

PRK12704

phosphodiesterase; Provisional

279-433

3.70e-03

phosphodiesterase; Provisional

Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.92 E-value: 3.70e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  279 AKNAVQQLHKEMAQRMEQANKKCEEARQE-----KEAMVMKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQL 353
Cdd:PRK12704  29 AEAKIKEAEEEAKRILEEAKKEAEAIKKEalleaKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKR 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016  354 SQEkgrlhqlYETKEGETTRLIREIDKLKEDINShviKVKWAQNKLK--AEMDSH-------KETKDKLKETTTKL---- 420
Cdd:PRK12704 109 EEE-------LEKKEKELEQKQQELEKKEEELEE---LIEEQLQELEriSGLTAEeakeillEKVEEEARHEAAVLikei 178

                        170
                 ....*....|....
gi 36031016  421 -TQAKEEADQIRKN 433
Cdd:PRK12704 179 eEEAKEEADKKAKE 192

YhaN

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

203-559

3.91e-03

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 3.91e-03

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 203 LQQEHIIKKLIKENKKHQELFVDICSEKDNLREELKKRTETEKQ---HMNTIKQLESRIEELNKEVKASRDQLIAQDVTA 279
Cdd:COG4717 121 LEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEEleeLEAELAELQEELEELLEQLSLATEEELQDLAEE 200

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 280 KNAVQQLHKEMAQRMEQANKKCEEARQEKEAMVMKYVRGEKE-------------------------------------- 321
Cdd:COG4717 201 LEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEerlkearlllliaaallallglggsllsliltiagvlf 280

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 322 ---------SLDLRKEKETLEKKLRDANKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINshvikv 392
Cdd:COG4717 281 lvlgllallFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLR------ 354

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 393 KWAQNKLKAEMDSHKETKDKLketttkLTQAKEEADQIRKNCQDMIKTYQESEEiKSNELDAKLRVTKGELEKQMQEKS- 471
Cdd:COG4717 355 EAEELEEELQLEELEQEIAAL------LAEAGVEDEEELRAALEQAEEYQELKE-ELEELEEQLEELLGELEELLEALDe 427

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 36031016 472 DQLEmhhakiKELEDLKRTFKEGMDELRTLRTKVKCLEDE--RLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQ 549
Cdd:COG4717 428 EELE------EELEELEEELEELEEELEELREELAELEAEleQLEEDGELAELLQELEELKAELRELAEEWAALKLALEL 501

                       410
                ....*....|
gi 36031016 550 LQRGKQEIEN 559
Cdd:COG4717 502 LEEAREEYRE 511

SMC_prok_B