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Conserved domains on  [gi|217035105|ref|NP_060668|]
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dnaJ homolog subfamily C member 11 [Homo sapiens]

Protein Classification

dnaJ family chaperone protein( domain architecture ID 10446376)

dnaJ family chaperone protein such as dnaJ homolog subfamily C member 11 (DNAJC11), which associates with the mitochondrial contact site and cristae junction organizing system (MICOS) complex that plays roles in the maintenance of cristae junctions, inner membrane architecture, and formation of contact sites between the inner and outer membranes; contains an N-terminal J-domain and a C-terminal DUF3395 domain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ-like_C11_C pfam11875
DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, ...
 410-549 1.48e-65

DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, including DnaJ homolog subfamily C member 11 (DNAJC11) from mammals and Chaperone protein dnaJ 13 from Arabidopsis. DNAJC11 is a mitochondrial outer membrane protein involved in mitochondrial biogenesis and in the response to microenvironment changes and requirements. The J-domain is mediated its mitochondrial localization, while this domain is critical for protein-protein interactions.


:

Pssm-ID: 463378  Cd Length: 144  Bit Score: 209.75  E-value: 1.48e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105  410 PYLRAQKEKELEKQRESAATDVLQKKQEAESAVRLMQESVRRIIEAEESRMGLIIVNAWYGKFVNDK---SRKSEKVKVI 486
Cdd:pfam11875   1 PRKRRRKKRKLEELREKNKERIAEKRREAEAAIELMKETAERKRAAEEEKGGLVITKALYGNLPAFPdeeSDDDLEPEVI 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 217035105  487 DVTVPLQCLVKDSKLILTEA-SKAGLPGFYDPCVGEEKNLKVLYQFRGVLHQVMVLDSEALRIP 549
Cdd:pfam11875  81 DVTIPLQALVKDSQLILPEGvSKSGLPGFYDPCPGEPKSLRVRYTFRGQLHEVEVDDNEELRLP 144
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 14-79 2.73e-25

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 98.70  E-value: 2.73e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 217035105   14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDpelKSQAERLFNLVHQAYEVLSDPQTRAIYD 79
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPG---DPEAEEKFKEINEAYEVLSDPEKRAIYD 63
 
Name Accession Description Interval E-value
DnaJ-like_C11_C pfam11875
DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, ...
 410-549 1.48e-65

DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, including DnaJ homolog subfamily C member 11 (DNAJC11) from mammals and Chaperone protein dnaJ 13 from Arabidopsis. DNAJC11 is a mitochondrial outer membrane protein involved in mitochondrial biogenesis and in the response to microenvironment changes and requirements. The J-domain is mediated its mitochondrial localization, while this domain is critical for protein-protein interactions.


Pssm-ID: 463378  Cd Length: 144  Bit Score: 209.75  E-value: 1.48e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105  410 PYLRAQKEKELEKQRESAATDVLQKKQEAESAVRLMQESVRRIIEAEESRMGLIIVNAWYGKFVNDK---SRKSEKVKVI 486
Cdd:pfam11875   1 PRKRRRKKRKLEELREKNKERIAEKRREAEAAIELMKETAERKRAAEEEKGGLVITKALYGNLPAFPdeeSDDDLEPEVI 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 217035105  487 DVTVPLQCLVKDSKLILTEA-SKAGLPGFYDPCVGEEKNLKVLYQFRGVLHQVMVLDSEALRIP 549
Cdd:pfam11875  81 DVTIPLQALVKDSQLILPEGvSKSGLPGFYDPCPGEPKSLRVRYTFRGQLHEVEVDDNEELRLP 144
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 14-79 2.73e-25

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 98.70  E-value: 2.73e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 217035105   14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDpelKSQAERLFNLVHQAYEVLSDPQTRAIYD 79
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPG---DPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 14-87 7.35e-25

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 106.15  E-value: 7.35e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 217035105   14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLE 87
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKE----AEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN 70
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 14-101 1.89e-24

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 99.01  E-value: 1.89e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEV 93
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP---EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATEL 77


                 ....*...
gi 217035105  94 VERRRTPA 101
Cdd:COG0484   78 AESAAAEA 85
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 14-90 1.10e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 102.92  E-value: 1.10e-23
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDkhRDPELKSqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEG 90
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPD--RNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGG 78
DnaJ smart00271
DnaJ molecular chaperone homology domain;
13-73 1.05e-20

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 85.75  E-value: 1.05e-20
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 217035105    13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPelKSQAERLFNLVHQAYEVLSDPQ 73
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD--KEEAEEKFKEINEAYEVLSDPE 59
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 14-71 1.78e-20

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 84.90  E-value: 1.78e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksQAERLFNLVHQAYEVLSD 71
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDP---EAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
14-90 1.53e-18

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 88.34  E-value: 1.53e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEG 90
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPD----AAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEG 78
 
Name Accession Description Interval E-value
DnaJ-like_C11_C pfam11875
DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, ...
 410-549 1.48e-65

DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, including DnaJ homolog subfamily C member 11 (DNAJC11) from mammals and Chaperone protein dnaJ 13 from Arabidopsis. DNAJC11 is a mitochondrial outer membrane protein involved in mitochondrial biogenesis and in the response to microenvironment changes and requirements. The J-domain is mediated its mitochondrial localization, while this domain is critical for protein-protein interactions.


Pssm-ID: 463378  Cd Length: 144  Bit Score: 209.75  E-value: 1.48e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105  410 PYLRAQKEKELEKQRESAATDVLQKKQEAESAVRLMQESVRRIIEAEESRMGLIIVNAWYGKFVNDK---SRKSEKVKVI 486
Cdd:pfam11875   1 PRKRRRKKRKLEELREKNKERIAEKRREAEAAIELMKETAERKRAAEEEKGGLVITKALYGNLPAFPdeeSDDDLEPEVI 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 217035105  487 DVTVPLQCLVKDSKLILTEA-SKAGLPGFYDPCVGEEKNLKVLYQFRGVLHQVMVLDSEALRIP 549
Cdd:pfam11875  81 DVTIPLQALVKDSQLILPEGvSKSGLPGFYDPCPGEPKSLRVRYTFRGQLHEVEVDDNEELRLP 144
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 14-79 2.73e-25

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 98.70  E-value: 2.73e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 217035105   14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDpelKSQAERLFNLVHQAYEVLSDPQTRAIYD 79
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPG---DPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 14-87 7.35e-25

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 106.15  E-value: 7.35e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 217035105   14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLE 87
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKE----AEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN 70
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 14-101 1.89e-24

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 99.01  E-value: 1.89e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEV 93
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP---EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATEL 77


                 ....*...
gi 217035105  94 VERRRTPA 101
Cdd:COG0484   78 AESAAAEA 85
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 14-90 1.10e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 102.92  E-value: 1.10e-23
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDkhRDPELKSqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEG 90
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPD--RNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGG 78
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
11-79 8.24e-22

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 89.78  E-value: 8.24e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 217035105  11 DNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDkhRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYD 79
Cdd:COG2214    3 DLKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPD--RGGELKALAEELFQRLNEAYEVLSDPERRAEYD 69
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 1-87 8.24e-21

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 94.89  E-value: 8.24e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105   1 MATALSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqaerLFNLVHQAYEVLSDPQTRAIYDI 80
Cdd:PTZ00037  16 FDGGRRKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPE-------KFKEISRAYEVLSDPEKRKIYDE 88


                 ....*..
gi 217035105  81 YGKRGLE 87
Cdd:PTZ00037  89 YGEEGLE 95
DnaJ smart00271
DnaJ molecular chaperone homology domain;
13-73 1.05e-20

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 85.75  E-value: 1.05e-20
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 217035105    13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPelKSQAERLFNLVHQAYEVLSDPQ 73
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD--KEEAEEKFKEINEAYEVLSDPE 59
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 14-91 1.05e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 94.06  E-value: 1.05e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDkhRDPELKsQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGW 91
Cdd:PRK14294   5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPD--RNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGF 79
PRK14293 PRK14293
molecular chaperone DnaJ;
14-86 1.09e-20

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 93.90  E-value: 1.09e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPelksQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGL 86
Cdd:PRK14293   4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEP----GAEDRFKEINRAYEVLSDPETRARYDQFGEAGV 72
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 14-71 1.78e-20

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 84.90  E-value: 1.78e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksQAERLFNLVHQAYEVLSD 71
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDP---EAEEKFKEINEAYEVLSD 55
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 13-85 1.31e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 90.62  E-value: 1.31e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 217035105  13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHrdPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRG 85
Cdd:PRK14282   4 KDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRH--PENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG 74
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 14-90 1.67e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 90.60  E-value: 1.67e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEG 90
Cdd:PRK14291   4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPE----AEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSG 76
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
14-90 1.53e-18

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 88.34  E-value: 1.53e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEG 90
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPD----AAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEG 78
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 10-85 1.72e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 87.45  E-value: 1.72e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 217035105  10 LDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRG 85
Cdd:PRK14276   1 MNNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPG----AEEKYKEVQEAYETLSDPQKRAAYDQYGAAG 72
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 14-87 3.39e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 86.44  E-value: 3.39e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLE 87
Cdd:PRK14298   6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPD----AEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID 75
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 14-86 4.51e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 86.44  E-value: 4.51e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDpelKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGL 86
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPG---DAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP 71
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 13-92 8.29e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 84.22  E-value: 8.29e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105  13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEmEGWE 92
Cdd:PRK14299   4 KDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPG----AEEKFKEINEAYTVLSDPEKRRIYDTYGTTAAS-AGWQ 78
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 11-90 3.21e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 83.70  E-value: 3.21e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105  11 DNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKhrDPELKsQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEG 90
Cdd:PRK14277   3 AKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDL--NPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGG 79
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 14-82 7.41e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 82.41  E-value: 7.41e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksQAERlFNLVHQAYEVLSDPQTRAIYDIYG 82
Cdd:PRK14278   4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEE---AQEK-FKEISVAYEVLSDPEKRRIVDLGG 68
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 13-82 1.52e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 81.52  E-value: 1.52e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105  13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHrdPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYG 82
Cdd:PRK14290   3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLH--PGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTG 70
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 10-90 1.85e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 81.33  E-value: 1.85e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105  10 LDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRD-PElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEM 88
Cdd:PRK14301   1 MSQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDnPE----AEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNG 76


                 ..
gi 217035105  89 EG 90
Cdd:PRK14301  77 NG 78
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 14-90 3.89e-16

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 81.78  E-value: 3.89e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 217035105   14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEG 90
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPD----AASIFAEINEANDVLSNPKKRANYDKYGHDGVDRED 75
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 14-82 8.55e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 79.16  E-value: 8.55e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPelksQAERLFNLVHQAYEVLSDPQTRAIYDIYG 82
Cdd:PRK14292   3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEK----GAAEKFAQINEAYAVLSDAEKRAHYDRFG 67
PRK14297 PRK14297
molecular chaperone DnaJ;
12-82 8.79e-16

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 79.06  E-value: 8.79e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 217035105  12 NEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDpelKSQAERLFNLVHQAYEVLSDPQTRAIYDIYG 82
Cdd:PRK14297   3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKG---NKEAEEKFKEINEAYQVLSDPQKKAQYDQFG 70
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 14-86 9.26e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 79.47  E-value: 9.26e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDpelKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGL 86
Cdd:PRK14281   4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPD---NKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 10-86 1.77e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 78.11  E-value: 1.77e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 217035105  10 LDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDpelKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGL 86
Cdd:PRK14286   1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKG---NKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGV 74
PRK14280 PRK14280
molecular chaperone DnaJ;
14-85 2.01e-15

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 78.22  E-value: 2.01e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRG 85
Cdd:PRK14280   5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEG----ADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72
PRK14289 PRK14289
molecular chaperone DnaJ;
14-86 2.45e-15

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 77.95  E-value: 2.45e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKhrDPELKsQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGL 86
Cdd:PRK14289   6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDK--NPGDK-EAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGV 75
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 11-91 5.30e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 76.79  E-value: 5.30e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105  11 DNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGleMEG 90
Cdd:PRK14283   3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEG----AEEKFKEISEAYAVLSDDEKRQRYDQFGHAG--MDG 76


                 .
gi 217035105  91 W 91
Cdd:PRK14283  77 F 77
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 10-82 3.18e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 74.28  E-value: 3.18e-14
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 217035105  10 LDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYG 82
Cdd:PRK14287   1 MSKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPD----AEDKFKEVKEAYDTLSDPQKKAHYDQFG 69
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 13-87 7.84e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 73.10  E-value: 7.84e-14
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 217035105  13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLE 87
Cdd:PRK14285   3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK---EAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFE 74
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
10-77 3.32e-13

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 64.82  E-value: 3.32e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 217035105  10 LDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKH---RDPELKSQAERLFNLVHQAYEVLSDPQTRAI 77
Cdd:COG1076    1 MQLDDAFELLGLPPDADDAELKRAYRKLQREHHPDRLaagLPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PRK14288 PRK14288
molecular chaperone DnaJ;
15-90 4.50e-13

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 70.87  E-value: 4.50e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 217035105  15 YYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEG 90
Cdd:PRK14288   5 YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK---EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAG 77
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 14-76 5.24e-13

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 63.87  E-value: 5.24e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 217035105  14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKhrdPELKSQAERLFNLVHQAYEVLSDPQTRA 76
Cdd:COG5407    1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDR---NKGDPKAEERFKEINEAYELLSDAEKRA 60
PRK10266 PRK10266
curved DNA-binding protein;
13-79 8.35e-13

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 69.46  E-value: 8.35e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 217035105  13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYD 79
Cdd:PRK10266   4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPD----AEARFKEVAEAWEVLSDEQRRAEYD 66
PRK14295 PRK14295
molecular chaperone DnaJ;
5-79 2.12e-12

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 68.72  E-value: 2.12e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 217035105   5 LSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDpelKSQAERLFNLVHQAYEVLSDPQTRAIYD 79
Cdd:PRK14295   1 MSTKDYIEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKG---DAKAEERFKEISEAYDVLSDEKKRKEYD 72
PRK14279 PRK14279
molecular chaperone DnaJ;
5-79 3.64e-12

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 68.22  E-value: 3.64e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 217035105   5 LSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHrdPELKSQAERlFNLVHQAYEVLSDPQTRAIYD 79
Cdd:PRK14279   1 MAQREWVEKDFYKELGVSSDASAEEIKKAYRKLARELHPDAN--PGDPAAEER-FKAVSEAHDVLSDPAKRKEYD 72
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 12-82 2.19e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 65.81  E-value: 2.19e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 217035105  12 NEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRdpelKSQAERLFNLVHQAYEVLSDPQTRAIYDIYG 82
Cdd:PRK14300   2 SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD----AKDAEKKFKEINAAYDVLKDEQKRAAYDRFG 68
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 13-82 1.16e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 60.35  E-value: 1.16e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105  13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPElksqAERLFNLVHQAYEVLSDPQTRAIYDIYG 82
Cdd:PRK14296   4 KDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPD----AHDKMVEINEAADVLLDKDKRKQYDQFG 69
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 14-79 5.45e-06

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 48.88  E-value: 5.45e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 217035105  14 DYYSLLNV---RREASSEELKAAYRRLCMLYHPDKHRDPELKSQAErLFNLVHQAYEVLSDPQTRAIYD 79
Cdd:COG5269   44 DLYALLGLskyRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDE-FFKLIQKAREVLGDRKLRLQYD 111
djlA PRK09430
co-chaperone DjlA;
13-45 1.91e-04

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 43.26  E-value: 1.91e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 217035105  13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDK 45
Cdd:PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
PHA02624 PHA02624
large T antigen; Provisional
 1-92 1.64e-03

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 41.12  E-value: 1.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217035105   1 MATALSEEELdnEDYYSLLNVRREA--SSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFN-LVHQAYEVLSDPQTRAI 77
Cdd:PHA02624   1 MDKTLSREES--KELMDLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKkLQEGVKSARQSFGTQDS 78

                         90
                 ....*....|....*..
gi 217035105  78 YDI--YGKRGLEmEGWE 92
Cdd:PHA02624  79 SEIptYGTPEWE-QWWE 94
hscB PRK03578
Fe-S protein assembly co-chaperone HscB;
12-78 2.09e-03

Fe-S protein assembly co-chaperone HscB;


Pssm-ID: 235133 [Multi-domain]  Cd Length: 176  Bit Score: 39.23  E-value: 2.09e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 217035105  12 NEDYYSL--LNVRREASSEELKAAYRRLCMLYHPDKHRDpelKSQAERLFNL-----VHQAYEVLSDPQTRAIY 78
Cdd:PRK03578   5 KDDHFSLfgLPARFALDEAALDAAYRTVQAQVHPDRFAA---AGDAEKRVAMqwatrANEAYQTLRDPLKRARY 75
PHA03102 PHA03102
Small T antigen; Reviewed
 17-51 2.89e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 38.50  E-value: 2.89e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 217035105  17 SLLNVRREA--SSEELKAAYRRLCMLYHPDKHRDPEL 51
Cdd:PHA03102   9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGDEEK 45
hscB PRK05014
co-chaperone HscB; Provisional
 14-78 5.23e-03

co-chaperone HscB; Provisional


Pssm-ID: 179914 [Multi-domain]  Cd Length: 171  Bit Score: 37.97  E-value: 5.23e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 217035105  14 DYYSLLN--VRREASSEELKAAYRRLCMLYHPDKHRDpelKSQAERLFNL-----VHQAYEVLSDPQTRAIY 78
Cdd:PRK05014   2 DYFTLFGlpARYDIDTQLLASRYQELQRQFHPDKFAN---ASERERLLAVqqaatINDAYQTLKHPLKRAEY 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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