|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
398-643 |
3.33e-10 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
:
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 61.18 E-value: 3.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 398 WVAFAKFYEDNGQLDDARVILEKATKVNfkqvDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEyfdgsepvq 477
Cdd:COG0457 11 YNNLGLAYRRLGRYEEAIEDYEKALELD----PDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAE--------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 478 nrvykslkVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFkwpnvSDIW 557
Cdd:COG0457 78 --------ALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELD-----PDDA 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 558 STYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIK 637
Cdd:COG0457 145 DALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLL 224
|
....*.
gi 55770906 638 RAAEIY 643
Cdd:COG0457 225 LALALL 230
|
|
| Spy super family |
cl27809 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
55-187 |
8.47e-04 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
The actual alignment was detected with superfamily member COG3914:
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 43.06 E-value: 8.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 55 QLYERALKLLPCSYKLWYRYLKARRAQVKhrcvtdpaYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFD 134
Cdd:COG3914 99 ALYRRALALNPDNAEALFNLGNLLLALGR--------LEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALR 170
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 55770906 135 RALRALPitQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYL 187
Cdd:COG3914 171 RALELDP--DNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLL 221
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
308-466 |
3.44e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
:
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 39.17 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 308 AAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQtVDP 387
Cdd:COG5010 7 FDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQ-LDP 85
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 55770906 388 FKATgkphtLWVAFAKFYEDNGQLDDARVILEKATKVNfkqvDDLASVWCQCGELELRHENYDEALRLLRKATALPARR 466
Cdd:COG5010 86 NNPE-----LYYNLALLYSRSGDKDEAKEYYEKALALS----PDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSPLK 155
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
398-643 |
3.33e-10 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 61.18 E-value: 3.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 398 WVAFAKFYEDNGQLDDARVILEKATKVNfkqvDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEyfdgsepvq 477
Cdd:COG0457 11 YNNLGLAYRRLGRYEEAIEDYEKALELD----PDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAE--------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 478 nrvykslkVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFkwpnvSDIW 557
Cdd:COG0457 78 --------ALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELD-----PDDA 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 558 STYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIK 637
Cdd:COG0457 145 DALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLL 224
|
....*.
gi 55770906 638 RAAEIY 643
Cdd:COG0457 225 LALALL 230
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
55-187 |
8.47e-04 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 43.06 E-value: 8.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 55 QLYERALKLLPCSYKLWYRYLKARRAQVKhrcvtdpaYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFD 134
Cdd:COG3914 99 ALYRRALALNPDNAEALFNLGNLLLALGR--------LEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALR 170
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 55770906 135 RALRALPitQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYL 187
Cdd:COG3914 171 RALELDP--DNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLL 221
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
396-462 |
2.07e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 37.75 E-value: 2.07e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 55770906 396 TLWVAFAKFYEDNGQLDDARVILEKA----TKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATAL 462
Cdd:pfam13424 4 TALNNLAAVLRRLGRYDEALELLEKAleiaRRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALAL 74
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
308-466 |
3.44e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 39.17 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 308 AAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQtVDP 387
Cdd:COG5010 7 FDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQ-LDP 85
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 55770906 388 FKATgkphtLWVAFAKFYEDNGQLDDARVILEKATKVNfkqvDDLASVWCQCGELELRHENYDEALRLLRKATALPARR 466
Cdd:COG5010 86 NNPE-----LYYNLALLYSRSGDKDEAKEYYEKALALS----PDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSPLK 155
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
398-643 |
3.33e-10 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 61.18 E-value: 3.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 398 WVAFAKFYEDNGQLDDARVILEKATKVNfkqvDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEyfdgsepvq 477
Cdd:COG0457 11 YNNLGLAYRRLGRYEEAIEDYEKALELD----PDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAE--------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 478 nrvykslkVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFkwpnvSDIW 557
Cdd:COG0457 78 --------ALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELD-----PDDA 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 558 STYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIK 637
Cdd:COG0457 145 DALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLL 224
|
....*.
gi 55770906 638 RAAEIY 643
Cdd:COG0457 225 LALALL 230
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
259-584 |
5.27e-10 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 61.28 E-value: 5.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 259 WCSLADYYIRSGHFEKARDVYEEAIrtvmtvrdftQVFDSYAqfeesmiaakmETASELGReeeddvdLELRLARFEQLI 338
Cdd:COG2956 11 WYFKGLNYLLNGQPDKAIDLLEEAL----------ELDPETV-----------EAHLALGN-------LYRRRGEYDRAI 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 339 SrrpLLLNsvLLRQNPHHVHEWHK--RVALHQGRPREIINTYTEAVQTvDPFKATgkphtLWVAFAKFYEDNGQLDDARV 416
Cdd:COG2956 63 R---IHQK--LLERDPDRAEALLElaQDYLKAGLLDRAEELLEKLLEL-DPDDAE-----ALRLLAEIYEQEGDWEKAIE 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 417 ILEKATKVNfkqvDDLASVWCQCGELELRHENYDEALRLLRKATALparraeyfdgsEPvqnrvyKSLKVWSMLADLEES 496
Cdd:COG2956 132 VLERLLKLG----PENAHAYCELAELYLEQGDYDEAIEALEKALKL-----------DP------DCARALLLLAELYLE 190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 497 LGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFkwPNVSDIwsTYLTKFIARYGGrkLERA 576
Cdd:COG2956 191 QGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELD--PSDDLL--LALADLLERKEG--LEAA 264
|
....*...
gi 55770906 577 RDLFEQAL 584
Cdd:COG2956 265 LALLERQL 272
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
431-656 |
3.94e-07 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 53.84 E-value: 3.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 431 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEyfdgsepvqnrvykslkVWSMLADLEESLGTFQSTKAVYDRI 510
Cdd:COG3914 76 LLAALLELAALLLQALGRYEEALALYRRALALNPDNAE-----------------ALFNLGNLLLALGRLEEALAALRRA 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 511 LDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFkwPNVSDIWSTyLTKFIARYGgrKLERARDLFEQALDGCPPK 590
Cdd:COG3914 139 LALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELD--PDNAEALNN-LGNALQDLG--RLEEAIAAYRRALELDPDN 213
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 55770906 591 -YAKTLYLLYAQLEEEWGLA---RHAMAVYERATRAVEP-AQQYDMFN--IYIKRAAEIYGVTHTRGIYQKAI 656
Cdd:COG3914 214 aDAHSNLLFALRQACDWEVYdrfEELLAALARGPSELSPfALLYLPDDdpAELLALARAWAQLVAAAAAPELP 286
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
398-547 |
4.12e-07 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 50.19 E-value: 4.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 398 WVAFAKFYEDNGQLDDARVILEKATKVNfkqvDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYfdgsepvq 477
Cdd:COG4783 7 LYALAQALLLAGDYDEAEALLEKALELD----PDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEA-------- 74
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 478 nrvykslkvWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISL 547
Cdd:COG4783 75 ---------RLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALEL 135
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
431-657 |
6.95e-07 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 51.55 E-value: 6.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 431 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEyfdgsepvqnrvykslkVWSMLADLEESLGTFQSTKAVYDRI 510
Cdd:COG0457 6 DDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAE-----------------ALYNLGLAYLRLGRYEEALADYEQA 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 511 LDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFkwPNVSDIWSTYLtkfIARYGGRKLERARDLFEQALDGCpPK 590
Cdd:COG0457 69 LELDPDDAEALNNLGLALQALGRYEEALEDYDKALELD--PDDAEALYNLG---LALLELGRYDEAIEAYERALELD-PD 142
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 55770906 591 YAKTLYLLyAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIE 657
Cdd:COG0457 143 DADALYNL-GIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALR 208
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
300-544 |
1.87e-06 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 51.53 E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 300 AQFEESMIAAKMETASELGREEEDdvdLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRvalhQGRPREIINTYT 379
Cdd:COG3914 30 AELEAAALAAALGLALLLLAALAE---AAAAALLALAAGEAAAAAAALLLLAALLELAALLLQA----LGRYEEALALYR 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 380 EAVQtVDPfkatgKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNfkqvDDLASVWCQCGELELRHENYDEALRLLRKA 459
Cdd:COG3914 103 RALA-LNP-----DNAEALFNLGNLLLALGRLEEALAALRRALALN----PDFAEAYLNLGEALRRLGRLEEAIAALRRA 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 460 TALPARRAEyfdgsepvqnrvykslkVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFL------EEHKY 533
Cdd:COG3914 173 LELDPDNAE-----------------ALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALrqacdwEVYDR 235
|
250
....*....|.
gi 55770906 534 FEESFKAYERG 544
Cdd:COG3914 236 FEELLAALARG 246
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
432-689 |
4.54e-05 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 46.26 E-value: 4.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 432 LASVWCQCGELELRHENYDEALRLLRKATALPA-------------RRAEYFDGSEpvqnRVYKSL--------KVWSML 490
Cdd:COG2956 7 AALGWYFKGLNYLLNGQPDKAIDLLEEALELDPetveahlalgnlyRRRGEYDRAI----RIHQKLlerdpdraEALLEL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 491 ADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFkwPNVSDIWSTYLTKFIARygg 570
Cdd:COG2956 83 AQDYLKAGLLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLG--PENAHAYCELAELYLEQ--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 571 RKLERARDLFEQALDGCpPKYAKTLYLLyAQLEEEWGLARHAMAVYERAtravepAQQYDMFNIYIKRAAEIYgvtHTRG 650
Cdd:COG2956 158 GDYDEAIEALEKALKLD-PDCARALLLL-AELYLEQGDYEEAIAALERA------LEQDPDYLPALPRLAELY---EKLG 226
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 55770906 651 IYQKAIEVL----SDEHAREMCLRFADMECKLGEIDRARAIYS 689
Cdd:COG2956 227 DPEEALELLrkalELDPSDDLLLALADLLERKEGLEAALALLE 269
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
398-513 |
6.20e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 40.76 E-value: 6.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 398 WVAFAKFYEDNGQLDDARVILEKATKVNfkqvDDLASVWCQCGELELRHENYDEALRLLRKATALparraeyfdgsEPvq 477
Cdd:COG4235 20 WLLLGRAYLRLGRYDEALAAYEKALRLD----PDNADALLDLAEALLAAGDTEEAEELLERALAL-----------DP-- 82
|
90 100 110
....*....|....*....|....*....|....*.
gi 55770906 478 nrvyKSLKVWSMLADLEESLGTFQSTKAVYDRILDL 513
Cdd:COG4235 83 ----DNPEALYLLGLAAFQQGDYAEAIAAWQKLLAL 114
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
55-187 |
8.47e-04 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 43.06 E-value: 8.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 55 QLYERALKLLPCSYKLWYRYLKARRAQVKhrcvtdpaYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFD 134
Cdd:COG3914 99 ALYRRALALNPDNAEALFNLGNLLLALGR--------LEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALR 170
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 55770906 135 RALRALPitQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYL 187
Cdd:COG3914 171 RALELDP--DNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLL 221
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
349-462 |
1.34e-03 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 39.79 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 349 LLRQNPHHVHEWHKR--VALHQGRPREIINTYTEAVQtVDPfkatgKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNf 426
Cdd:COG4783 30 ALELDPDNPEAFALLgeILLQLGDLDEAIVLLHEALE-LDP-----DEPEARLNLGLALLKAGDYDEALALLEKALKLD- 102
|
90 100 110
....*....|....*....|....*....|....*.
gi 55770906 427 kqvDDLASVWCQCGELELRHENYDEALRLLRKATAL 462
Cdd:COG4783 103 ---PEHPEAYLRLARAYRALGRPDEAIAALEKALEL 135
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
431-622 |
1.51e-03 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 41.05 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 431 DLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLAD---LEESLGTFQSTKAVY 507
Cdd:COG4785 17 AAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRALALPDLAQLYYErgvAYDSLGDYDLAIADF 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 508 DRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFkwPNVSDIwstYLTKFIARYGGRKLERARDLFEQA--LD 585
Cdd:COG4785 97 DQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELD--PDYAYA---YLNRGIALYYLGRYELAIADLEKAleLD 171
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 55770906 586 GCPPKYAKTLYLLYAQ---------LEEEWGLARHAMAVYERATRA 622
Cdd:COG4785 172 PNDPERALWLYLAERKldpekalalLLEDWATAYLLQGDTEEAREL 217
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
396-462 |
2.07e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 37.75 E-value: 2.07e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 55770906 396 TLWVAFAKFYEDNGQLDDARVILEKA----TKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATAL 462
Cdd:pfam13424 4 TALNNLAAVLRRLGRYDEALELLEKAleiaRRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALAL 74
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
308-466 |
3.44e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 39.17 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 308 AAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQtVDP 387
Cdd:COG5010 7 FDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQ-LDP 85
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 55770906 388 FKATgkphtLWVAFAKFYEDNGQLDDARVILEKATKVNfkqvDDLASVWCQCGELELRHENYDEALRLLRKATALPARR 466
Cdd:COG5010 86 NNPE-----LYYNLALLYSRSGDKDEAKEYYEKALALS----PDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSPLK 155
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
486-688 |
9.96e-03 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 38.83 E-value: 9.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 486 VWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLfkwpNVSDIWsTYLTKFI 565
Cdd:COG0457 10 AYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALEL----DPDDAE-ALNNLGL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55770906 566 ARYGGRKLERARDLFEQALDgCPPKYAKTLYLLyAQLEEEWGLARHAMAVYERATravepAQQYDMFNIYIKRAAeiygV 645
Cdd:COG0457 85 ALQALGRYEEALEDYDKALE-LDPDDAEALYNL-GLALLELGRYDEAIEAYERAL-----ELDPDDADALYNLGI----A 153
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 55770906 646 THTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIY 688
Cdd:COG0457 154 LEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVL 196
|
|
| |
