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Conserved domains on  [gi|229577329|ref|NP_064662|]
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dnaJ homolog subfamily B member 2 isoform 1 [Mus musculus]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 4-108 6.79e-34

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 125.64  E-value: 6.79e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLS--------DRSGPSRSETGGAGPGft 75
Cdd:PRK10767   6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSdpqkraayDQYGHAAFEQGGGGGG-- 82

                         90       100       110
                 ....*....|....*....|....*....|...
gi 229577329  76 ftfrspeevfrefFGSGDPFSELFDDlgVFSEL 108
Cdd:PRK10767  83 -------------FGGGGGFGDIFGD--IFGDI 100
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-108 6.79e-34

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 125.64  E-value: 6.79e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLS--------DRSGPSRSETGGAGPGft 75
Cdd:PRK10767   6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSdpqkraayDQYGHAAFEQGGGGGG-- 82

                         90       100       110
                 ....*....|....*....|....*....|...
gi 229577329  76 ftfrspeevfrefFGSGDPFSELFDDlgVFSEL 108
Cdd:PRK10767  83 -------------FGGGGGFGDIFGD--IFGDI 100
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-114 1.32e-32

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 121.94  E-value: 1.32e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329    3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnKEfAEKKFKEVAEAYEVLS--------DRSGPSRSETGGAGPGF 74
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-KE-AEEKFKEINEAYEVLSdpekraqyDQFGHAGFNGGGGGGGG 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 229577329   75 TFTFrspeEVFREFFGSGDPFSELFDDLGVFSELQNQGPR 114
Cdd:TIGR02349  79 GFNG----FDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPR 114
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-58 3.83e-32

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 112.57  E-value: 3.83e-32
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 229577329    3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-58 6.70e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 109.25  E-value: 6.70e-31
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 229577329     3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSD 58
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSD 57
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 4-58 1.56e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 103.01  E-value: 1.56e-28
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:cd06257    2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPE-AEEKFKEINEAYEVLSD 55
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-58 1.08e-27

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 103.63  E-value: 1.08e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 229577329   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPE-AEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
4-101 2.39e-22

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 95.27  E-value: 2.39e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDRSGPSRSETGGAG-----PGFTFtf 78
Cdd:NF037946   7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDgvdgeGGFGF-- 82

                         90       100
                 ....*....|....*....|...
gi 229577329  79 rSPEEVFREFFGSGDPFSELFDD 101
Cdd:NF037946  83 -DAFDVFSSFFETINKSGAFLDD 104
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-108 6.79e-34

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 125.64  E-value: 6.79e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLS--------DRSGPSRSETGGAGPGft 75
Cdd:PRK10767   6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSdpqkraayDQYGHAAFEQGGGGGG-- 82

                         90       100       110
                 ....*....|....*....|....*....|...
gi 229577329  76 ftfrspeevfrefFGSGDPFSELFDDlgVFSEL 108
Cdd:PRK10767  83 -------------FGGGGGFGDIFGD--IFGDI 100
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-114 1.32e-32

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 121.94  E-value: 1.32e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329    3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnKEfAEKKFKEVAEAYEVLS--------DRSGPSRSETGGAGPGF 74
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-KE-AEEKFKEINEAYEVLSdpekraqyDQFGHAGFNGGGGGGGG 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 229577329   75 TFTFrspeEVFREFFGSGDPFSELFDDLGVFSELQNQGPR 114
Cdd:TIGR02349  79 GFNG----FDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPR 114
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-58 3.83e-32

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 112.57  E-value: 3.83e-32
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 229577329    3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-58 6.70e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 109.25  E-value: 6.70e-31
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 229577329     3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSD 58
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSD 57
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 4-58 1.56e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 103.01  E-value: 1.56e-28
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:cd06257    2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPE-AEEKFKEINEAYEVLSD 55
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 4-116 6.90e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 109.45  E-value: 6.90e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDRSGPSRSETGGA----GPGFTFTFR 79
Cdd:PRK14301   6 YYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPE-AEQKFKEAAEAYEVLRDAEKRARYDRFGHagvnGNGGFGGFS 84

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 229577329  80 SPEEVFREFfgsGDPFSELFddlGVFSELQNQGPRLT 116
Cdd:PRK14301  85 SAEDIFSHF---SDIFGDLF---GFSGGGSRRGPRPQ 115
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-58 1.08e-27

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 103.63  E-value: 1.08e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 229577329   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPE-AEEKFKEINEAYEVLSD 55
PRK14289 PRK14289
molecular chaperone DnaJ;
4-106 3.21e-27

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 107.99  E-value: 3.21e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDRSGPSRSE------TGGA--GPGFT 75
Cdd:PRK14289   7 YYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKE-AEEKFKEAAEAYDVLSDPDKRSRYDqfghagVGGAagGGGFS 85

                         90       100       110
                 ....*....|....*....|....*....|.
gi 229577329  76 FTFRSPEEVFREFfgsGDPFSELFDDLGVFS 106
Cdd:PRK14289  86 GEGMSMEDIFSMF---GDIFGGHGGGFGGFG 113
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 4-92 9.97e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 104.12  E-value: 9.97e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD-----------RSGPSRSETGGAGP 72
Cdd:PRK14281   5 YYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKE-AEEHFKEVNEAYEVLSNddkrrrydqfgHAGVGSSAASGGGP 83

                         90       100
                 ....*....|....*....|...
gi 229577329  73 GFT---FTFRSPEEVFREFFGSG 92
Cdd:PRK14281  84 GYGgggGDFNDIFSAFNDMFGGG 106
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 4-114 1.07e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 101.02  E-value: 1.07e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLS--------DRSG-----PSRSETGGA 70
Cdd:PRK14282   6 YYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSdpqkramyDRFGyvgeqPPYQETESG 85

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 229577329  71 GPGFtftfrspEEVFREF--FGSGDPFSELFDDLGVFSELQNQGPR 114
Cdd:PRK14282  86 GGFF-------EDIFKDFenIFNRDIFDIFFGERRTQEEQREYARR 124
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 4-92 1.56e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 100.22  E-value: 1.56e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDR-----------SGPSRSETGGAGp 72
Cdd:PRK14294   6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKE-AEELFKEAAEAYEVLSDPkkrgiydqyghEGLSGTGFSGFS- 83

                         90       100
                 ....*....|....*....|
gi 229577329  73 GFTFTFRSPEEVFREFFGSG 92
Cdd:PRK14294  84 GFDDIFSSFGDIFEDFFGFG 103
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 2-103 4.42e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 99.53  E-value: 4.42e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   2 ASYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD-----------RSGPSRSETGGA 70
Cdd:PRK14284   1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAE-AEKRFKEVSEAYEVLSDaqkresydrygKDGPFAGAGGFG 79

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 229577329  71 GPGFTftfrSPEEVFREFFG--------SGDPFSELFDDLG 103
Cdd:PRK14284  80 GAGMG----NMEDALRTFMGafggefggGGSFFEGLFGGLG 116
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 4-103 7.14e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 98.46  E-value: 7.14e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDrsgPSR----SETG-----GAGPGF 74
Cdd:PRK14290   5 YYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSD---PQKrrqyDQTGtvdfgAGGSNF 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 229577329  75 T---FT-FRSPEEVFREFFGsGDPFSELFDDLG 103
Cdd:PRK14290  82 NwdnFThFSDINDIFNQIFG-GNFGSDFFSGFG 113
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 4-114 1.76e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 97.56  E-value: 1.76e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLS--------DRSGPSRSETGGAGPGfT 75
Cdd:PRK14277   7 YYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKE-AEQKFKEINEAYEILSdpqkraqyDQFGHAAFDPGGFGQG-G 84

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 229577329  76 FTFRSPEEVFREF-FGS-GDPFSELFDD-LGVFSELQNQGPR 114
Cdd:PRK14277  85 FGQGGFGGGGFDFdFGGfGDIFEDIFGDfFGTGRRRAETGPQ 126
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 4-58 2.06e-23

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 89.67  E-value: 2.06e-23
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:COG5407    2 PYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPK-AEERFKEINEAYELLSD 55
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 4-99 8.21e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 95.83  E-value: 8.21e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLS--------DRSGPSRSETGGAGPGFT 75
Cdd:PRK14285   5 YYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKE-AESIFKEATEAYEVLIddnkraqyDRFGHTAFEGGGGFEGFS 83

                         90       100
                 ....*....|....*....|....
gi 229577329  76 FTFRSPEEVFREFfgsGDPFSELF 99
Cdd:PRK14285  84 GGFSGFSDIFEDF---GDIFDSFF 104
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-58 1.98e-22

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 88.24  E-value: 1.98e-22
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 229577329   1 MASYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSD 58
Cdd:COG2214    4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSD 61
PRK14297 PRK14297
molecular chaperone DnaJ;
1-92 2.08e-22

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 94.85  E-value: 2.08e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   1 MAS--YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDRSGPSRSE---------TGG 69
Cdd:PRK14297   1 MASkdYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKE-AEEKFKEINEAYQVLSDPQKKAQYDqfgtadfngAGG 79

                         90       100
                 ....*....|....*....|....*...
gi 229577329  70 AGP----GFTFT-FRSPEEVFREFFGSG 92
Cdd:PRK14297  80 FGSggfgGFDFSdMGGFGDIFDSFFGGG 107
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
4-101 2.39e-22

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 95.27  E-value: 2.39e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDRSGPSRSETGGAG-----PGFTFtf 78
Cdd:NF037946   7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDgvdgeGGFGF-- 82

                         90       100
                 ....*....|....*....|...
gi 229577329  79 rSPEEVFREFFGSGDPFSELFDD 101
Cdd:NF037946  83 -DAFDVFSSFFETINKSGAFLDD 104
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 1-92 2.84e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 94.35  E-value: 2.84e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   1 MAS-YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnkEFAEKKFKEVAEAYEVLS--------DRSGPSRSETGGAG 71
Cdd:PRK14278   1 MARdYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSdpekrrivDLGGDPLESAGGGG 78

                         90       100
                 ....*....|....*....|.
gi 229577329  72 PGFTFTFRSPEEVFREFFGSG 92
Cdd:PRK14278  79 GGFGGGFGGLGDVFEAFFGGG 99
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 4-114 8.87e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 92.99  E-value: 8.87e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKefAEKKFKEVAEAYEVLSDRSGPSRSET-GGAGPGFTFtfrSPE 82
Cdd:PRK14298   7 YYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPD--AEEKFKEISEAYAVLSDAEKRAQYDRfGHAGIDNQY---SAE 81

                         90       100       110
                 ....*....|....*....|....*....|....
gi 229577329  83 EVFR--EFFGSGDPFSELFddlGVFSELQNQGPR 114
Cdd:PRK14298  82 DIFRgaDFGGFGDIFEMFF---GGGGRRGRMGPR 112
PRK14280 PRK14280
molecular chaperone DnaJ;
4-99 9.04e-22

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 92.86  E-value: 9.04e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDRSGPSR-SETGGAGPGFTF-TFRSP 81
Cdd:PRK14280   6 YYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN--KEEGADEKFKEISEAYEVLSDDQKRAQyDQFGHAGPNQGFgGGGFG 83

                         90
                 ....*....|....*...
gi 229577329  82 EEVFREFFGSGDPFSELF 99
Cdd:PRK14280  84 GGDFGGGFGFEDIFSSFF 101
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 4-106 4.99e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 90.98  E-value: 4.99e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPdNKEfAEKKFKEVAEAYEVLSDrsgPSR----SETGGAGPGFTFTFR 79
Cdd:PRK14291   5 YYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPE-AEEKFKEINEAYQVLSD---PEKrklyDQFGHAAFSGSGQQQ 79

                         90       100
                 ....*....|....*....|....*....
gi 229577329  80 SPEEVFREFFGS--GDPFSELFDDLGVFS 106
Cdd:PRK14291  80 QGQEGFSDFGGGniEDILEDVFDIFGFGD 108
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 3-92 2.76e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 88.89  E-value: 2.76e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD-----------RSGPSrSETGGAG 71
Cdd:PRK14286   5 SYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKE-SEEKFKEATEAYEILRDpkkrqaydqfgKAGVN-AGAGGFG 82

                         90       100
                 ....*....|....*....|....*
gi 229577329  72 PG----FTFTFRSPEEVFREFFGSG 92
Cdd:PRK14286  83 QGaytdFSDIFGDFGDIFGDFFGGG 107
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 4-114 3.35e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 88.34  E-value: 3.35e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnkEFAEKKFKEVAEAYEVLSDRSGPSR-SETGGAG-PGFtftfrSP 81
Cdd:PRK14283   7 YYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRyDQFGHAGmDGF-----SQ 79

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 229577329  82 EEVFRE------FFGSGDPFSELFDDLGvFSELQNQGPR 114
Cdd:PRK14283  80 EDIFNNinfediFQGFGFGIGNIFDMFG-FGGGSRHGPQ 117
PRK14293 PRK14293
molecular chaperone DnaJ;
1-92 2.51e-19

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 85.81  E-value: 2.51e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   1 MASYYEILDVPRSASPDDIKKAYRKKALQWHPDKnpdNKEF-AEKKFKEVAEAYEVLSDRSGPSRSE-------TGGAGP 72
Cdd:PRK14293   2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEPgAEDRFKEINRAYEVLSDPETRARYDqfgeagvSGAAGF 78

                         90       100
                 ....*....|....*....|....*..
gi 229577329  73 -------GFTFTFrspEEVFREFFGSG 92
Cdd:PRK14293  79 pdmgdmgGFADIF---ETFFSGFGGAG 102
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 4-92 6.16e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 84.75  E-value: 6.16e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKN--PDnkefAEKKFKEVAEAYEVLS--------DRSGPSRSET--GGAG 71
Cdd:PRK14276   6 YYDRLGVSKDASQDEIKKAYRKLSKKYHPDINkePG----AEEKYKEVQEAYETLSdpqkraayDQYGAAGANGgfGGGA 81

                         90       100
                 ....*....|....*....|....*.
gi 229577329  72 PGFT-FT----FRSPEEVFREFFGSG 92
Cdd:PRK14276  82 GGFGgFDgsggFGGFEDIFSSFFGGG 107
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-92 4.24e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 82.63  E-value: 4.24e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   1 MASYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnkEFAEKKFKEVAEAYEVLS--------DRSGPSRSETGGAGP 72
Cdd:PRK14292   1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSdaekrahyDRFGTAPGAGMPGGD 78

                         90       100
                 ....*....|....*....|
gi 229577329  73 GFTFTFRSPEEVFREFFGSG 92
Cdd:PRK14292  79 PFGGMGFDPMDIFEQLFGGA 98
PRK14295 PRK14295
molecular chaperone DnaJ;
4-118 6.37e-18

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 82.20  E-value: 6.37e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD----------RS--GPSRSETG-GA 70
Cdd:PRK14295  11 YYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAK-AEERFKEISEAYDVLSDekkrkeydeaRSlfGNGGFRPGpGG 89

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 229577329  71 GPGFTFTFRspeevFREFFGSGDPFSELFDDLG----VFSELQNQGPRLTGP 118
Cdd:PRK14295  90 GGGGGFNFD-----LGDLFGGGAQGGGGAGGGGglgdVFGGLFNRGGRRTQP 136
PRK14279 PRK14279
molecular chaperone DnaJ;
4-99 4.91e-17

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 79.78  E-value: 4.91e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD-----------------RSGPSRSE 66
Cdd:PRK14279  11 FYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPA-AEERFKAVSEAHDVLSDpakrkeydetrrlfaggGFGGRRFD 89

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 229577329  67 TGGAGPGFTFTFRSPEEVFREFFGS---------GDPFSELF 99
Cdd:PRK14279  90 GGGGFGGFGTGGDGAEFNLNDLFDAagrgggggiGDLFGGLF 131
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 4-105 1.45e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 74.59  E-value: 1.45e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKefAEKKFKEVAEAYEVLS--------DRSGPSRSETGGAGP--- 72
Cdd:PRK14299   6 YYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPG--AEEKFKEINEAYTVLSdpekrriyDTYGTTAASAGWQGPppg 83

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 229577329  73 ---GFTFTFRSPEEvFREFfgsgdpFSELFDDLGVF 105
Cdd:PRK14299  84 ppgGGDFSGFNVGD-FSDF------FQQLFGGRGGF 112
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 4-92 4.51e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 73.89  E-value: 4.51e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDRSGPSRSET----------GGAGPG 73
Cdd:PRK14287   6 YYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQfghtdpnqgfGGGGAG 83

                         90
                 ....*....|....*....
gi 229577329  74 ftfTFRSPEEVFREFFGSG 92
Cdd:PRK14287  84 ---DFGGFSDIFDMFFGGG 99
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-61 3.64e-14

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 65.59  E-value: 3.64e-14
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 229577329   1 MASYYEILDVPRSASPDDIKKAYRKKALQWHPDK-----NPDNKEFAEKKFKEVAEAYEVLSDRSG 61
Cdd:COG1076    3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRG 68
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-92 4.05e-14

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 71.39  E-value: 4.05e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnkefaEKKFKEVAEAYEVLSDrsgPSR----SETGGAGPGFTFTFR 79
Cdd:PTZ00037  30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSD---PEKrkiyDEYGEEGLEGGEQPA 101

                         90
                 ....*....|...
gi 229577329  80 SPEEVFREFFGSG 92
Cdd:PTZ00037 102 DASDLFDLIFGGG 114
PRK14288 PRK14288
molecular chaperone DnaJ;
3-107 3.54e-13

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 68.18  E-value: 3.54e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDRSGPSRSEtggagpgftftfRSPE 82
Cdd:PRK14288   4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKE-AEEKFKLINEAYGVLSDEKKRALYD------------RYGK 70

                         90       100
                 ....*....|....*....|....*
gi 229577329  83 EVFREFFGSGDPFSELFDDLGVFSE 107
Cdd:PRK14288  71 KGLNQAGASQSDFSDFFEDLGSFFE 95
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 4-102 4.06e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 68.05  E-value: 4.06e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPD--KNPDnkefAEKKFKEVAEAYEVLSDRSGPSRSETGG-----AGPGFTF 76
Cdd:PRK14296   6 YYEVLGVSKTASEQEIRQAYRKLAKQYHPDlnKSPD----AHDKMVEINEAADVLLDKDKRKQYDQFGhaafdGSSGFSS 81

                         90       100
                 ....*....|....*....|....*..
gi 229577329  77 TFRSPEEVFREFFGSG-DPFSELFDDL 102
Cdd:PRK14296  82 NFGDFEDLFSNMGSSGfSSFTNIFSDF 108
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 4-58 1.77e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 66.19  E-value: 1.77e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDkNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:PRK14300   5 YYQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKD-AEKKFKEINAAYDVLKD 57
PRK10266 PRK10266
curved DNA-binding protein;
4-90 2.43e-11

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 62.53  E-value: 2.43e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   4 YYEILDVPRSASPDDIKKAYRKKALQWHPD--KNPDnkefAEKKFKEVAEAYEVLSD-------------RSGPSRSETG 68
Cdd:PRK10266   6 YYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDeqrraeydqlwqhRNDPQFNRQF 81

                         90       100
                 ....*....|....*....|..
gi 229577329  69 GAGPGFTFTFRSPEEVFREFFG 90
Cdd:PRK10266  82 QHGDGQSFNAEDFDDIFSSIFG 103
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 4-101 2.74e-11

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 63.29  E-value: 2.74e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329    4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKefAEKKFKEVAEAYEVLSDRSGPSRSETGG-----AGPGFTFTf 78
Cdd:TIGR03835   4 YYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPD--AASIFAEINEANDVLSNPKKRANYDKYGhdgvdREDDFDFQ- 80

                          90       100
                  ....*....|....*....|....*.
gi 229577329   79 rspEEVFREFF---GSGDPFSELFDD 101
Cdd:TIGR03835  81 ---ADVFNSFFeeiNKSGEFDNITDD 103
PHA03102 PHA03102
Small T antigen; Reviewed
 6-99 2.99e-07

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 48.90  E-value: 2.99e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   6 EILDVPRSASPD--DIKKAYRKKALQWHPDKNPDnkefaEKKFKEVAEAYEVLSDRSGPSRSETGGagpgftFTFRSPEE 83
Cdd:PHA03102   9 DLLGLPRSAWGNlpLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRESVKSLRDLDGE------EDSSSEEE 77

                         90       100
                 ....*....|....*....|.
gi 229577329  84 -----VFREFFGSGdpFSELF 99
Cdd:PHA03102  78 dvpsgYVGATFGDR--VNALY 96
PHA02624 PHA02624
large T antigen; Provisional
 6-99 2.31e-06

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 48.44  E-value: 2.31e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229577329   6 EILDVPRSA--SPDDIKKAYRKKALQWHPDKNPDnkefaEKKFKEVAEAYEVLSDRSGPSRSETGGAGPGFTFTFRSP-- 81
Cdd:PHA02624  15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQEGVKSARQSFGTQDSSEIPTYGTPew 89

                         90
                 ....*....|....*...
gi 229577329  82 EEVFREFFGSGDPfsELF 99
Cdd:PHA02624  90 EQWWEEFNEKWDE--DLF 105
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-58 1.77e-05

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 45.93  E-value: 1.77e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 229577329    4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFaeKKFKEVAEAYEVLSD 58
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGF--HKFKKINEAYQILGD 627
djlA PRK09430
co-chaperone DjlA;
5-56 2.73e-05

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 44.42  E-value: 2.73e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 229577329   5 YEILDVPRSASPDDIKKAYRKKALQWHPDK------NPDNKEFAEKKFKEVAEAYEVL 56
Cdd:PRK09430 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELI 260
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-59 4.87e-04

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 40.79  E-value: 4.87e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 229577329   2 ASYYEILDVPR---SASPDDIKKAYRKKALQWHPDK-----NPDNKEFaekkFKEVAEAYEVLSDR 59
Cdd:COG5269   43 VDLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKtaaggNKGCDEF----FKLIQKAREVLGDR 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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