NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|11560146|ref|NP_071360|]
View 

protein MANBAL isoform a [Homo sapiens]

Protein Classification

UPF0239 family protein( domain architecture ID 10536069)

UPF0239 family protein similar to Homo sapiens protein MANBAL and Drosophila melanogaster protein anon-73B1

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
UPF0239 pfam06783
Uncharacterized protein family (UPF0239);
7-74 3.86e-31

Uncharacterized protein family (UPF0239);


:

Pssm-ID: 399634  Cd Length: 83  Bit Score: 104.42  E-value: 3.86e-31
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 11560146    7 FSPPEVPEPTFLENLLRYGLFLGAIFQLICVLAIIV-PIPKSHE---AEAEPSEPRSAEVTRKPKAAVPSVN 74
Cdd:pfam06783  1 LSLPEYPEEDFFELLLRYGLFVGAIFQLVCILAAILmPGSKSHDqneEEAEPSEPKSSEQTKKPKGPAPQRL 72
 
Name Accession Description Interval E-value
UPF0239 pfam06783
Uncharacterized protein family (UPF0239);
7-74 3.86e-31

Uncharacterized protein family (UPF0239);


Pssm-ID: 399634  Cd Length: 83  Bit Score: 104.42  E-value: 3.86e-31
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 11560146    7 FSPPEVPEPTFLENLLRYGLFLGAIFQLICVLAIIV-PIPKSHE---AEAEPSEPRSAEVTRKPKAAVPSVN 74
Cdd:pfam06783  1 LSLPEYPEEDFFELLLRYGLFVGAIFQLVCILAAILmPGSKSHDqneEEAEPSEPKSSEQTKKPKGPAPQRL 72
 
Name Accession Description Interval E-value
UPF0239 pfam06783
Uncharacterized protein family (UPF0239);
7-74 3.86e-31

Uncharacterized protein family (UPF0239);


Pssm-ID: 399634  Cd Length: 83  Bit Score: 104.42  E-value: 3.86e-31
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 11560146    7 FSPPEVPEPTFLENLLRYGLFLGAIFQLICVLAIIV-PIPKSHE---AEAEPSEPRSAEVTRKPKAAVPSVN 74
Cdd:pfam06783  1 LSLPEYPEEDFFELLLRYGLFVGAIFQLVCILAAILmPGSKSHDqneEEAEPSEPKSSEQTKKPKGPAPQRL 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH