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Conserved domains on  [gi|11545863|ref|NP_071415|]
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methylcrotonoyl-CoA carboxylase beta chain, mitochondrial isoform 1 precursor [Homo sapiens]

Protein Classification

carboxyltransferase domain-containing protein( domain architecture ID 1001328)

carboxyltransferase domain-containing protein catalyzes the transcarboxylation from biotin to an acyl-CoA acceptor molecule; similar to methylcrotonyl-CoA carboxylase subunit beta

CATH:  3.90.226.10
Gene Ontology:  GO:0016740|GO:0009374
PubMed:  8102604

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Carboxyl_trans super family cl47203
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
36-563 0e+00

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


The actual alignment was detected with superfamily member PLN02820:

Pssm-ID: 481543 [Multi-domain]  Cd Length: 569  Bit Score: 895.70  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   36 DLGSALYQENYKQMKALVNQLHERVEHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDnEEVP 115
Cdd:PLN02820  37 DRNSDAFSANSKAMEGLLSELRSHVAKVRAGGGPEAVKRHRSRNKLLPRERIDRLLDPGSPFLELSQLAGHELYG-EDLP 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  116 GGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFPDRDHFGRTF 195
Cdd:PLN02820 116 SGGIVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCRLPCIYLVDSGGANLPRQAEVFPDRDHFGRIF 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  196 YNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDH 275
Cdd:PLN02820 196 YNQARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLAGPPLVKAATGEEVSAEDLGGADVHCKVSGVSDH 275
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  276 WALDDHHALHLTRKVVRNL------NYQKKLDVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKA 349
Cdd:PLN02820 276 FAQDELHALAIGRNIVKNLhlaakqGMENTLGSKNPEYKEPLYDVKELRGIVPADHKQSFDVRSVIARIVDGSEFDEFKK 355
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  350 FYGDTLVTGFARIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAV 429
Cdd:PLN02820 356 NYGTTLVTGFARIYGQPVGIIGNNGILFTESALKGAHFIELCAQRGIPLLFLQNITGFMVGSRSEASGIAKAGAKMVMAV 435
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  430 ACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPI 509
Cdd:PLN02820 436 ACAKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKT 515
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 11545863  510 IKKFEEEGNPYYSSARVWDDGIIDPADTRLVLGLSFSAALNAPIEKTDFGIFRM 563
Cdd:PLN02820 516 VEAYEREANPYYSTARLWDDGVIDPADTRRVLGLCLSAALNRSPEDTKFGVFRM 569
 
Name Accession Description Interval E-value
PLN02820 PLN02820
3-methylcrotonyl-CoA carboxylase, beta chain
36-563 0e+00

3-methylcrotonyl-CoA carboxylase, beta chain


Pssm-ID: 178415 [Multi-domain]  Cd Length: 569  Bit Score: 895.70  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   36 DLGSALYQENYKQMKALVNQLHERVEHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDnEEVP 115
Cdd:PLN02820  37 DRNSDAFSANSKAMEGLLSELRSHVAKVRAGGGPEAVKRHRSRNKLLPRERIDRLLDPGSPFLELSQLAGHELYG-EDLP 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  116 GGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFPDRDHFGRTF 195
Cdd:PLN02820 116 SGGIVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCRLPCIYLVDSGGANLPRQAEVFPDRDHFGRIF 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  196 YNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDH 275
Cdd:PLN02820 196 YNQARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLAGPPLVKAATGEEVSAEDLGGADVHCKVSGVSDH 275
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  276 WALDDHHALHLTRKVVRNL------NYQKKLDVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKA 349
Cdd:PLN02820 276 FAQDELHALAIGRNIVKNLhlaakqGMENTLGSKNPEYKEPLYDVKELRGIVPADHKQSFDVRSVIARIVDGSEFDEFKK 355
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  350 FYGDTLVTGFARIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAV 429
Cdd:PLN02820 356 NYGTTLVTGFARIYGQPVGIIGNNGILFTESALKGAHFIELCAQRGIPLLFLQNITGFMVGSRSEASGIAKAGAKMVMAV 435
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  430 ACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPI 509
Cdd:PLN02820 436 ACAKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKT 515
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 11545863  510 IKKFEEEGNPYYSSARVWDDGIIDPADTRLVLGLSFSAALNAPIEKTDFGIFRM 563
Cdd:PLN02820 516 VEAYEREANPYYSTARLWDDGVIDPADTRRVLGLCLSAALNRSPEDTKFGVFRM 569
MmdA COG4799
Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];
48-561 0e+00

Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];


Pssm-ID: 443827 [Multi-domain]  Cd Length: 508  Bit Score: 762.64  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  48 QMKALVNQLHERVEHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSpFLELSQFAGYQLYD-NEEVPGGGIITGIGRV 126
Cdd:COG4799   1 AMRALLAELRARREEALLGGGEKAIERQHARGKLTARERIDLLLDPGS-FLELGALAGHRMYDdDDRVPGDGVVTGIGTV 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863 127 SGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFpdrDHFGRTFYNQAiMSSKNI 206
Cdd:COG4799  80 DGRPVVVVANDFTVKGGSLGPMTAKKILRAQDIALENGLPVIYLVDSGGARLQEGVESF---AGYGRIFYRNA-RSSGGI 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863 207 AQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHL 286
Cdd:COG4799 156 PQISVIMGPCAAGGAYSPALSDFVIMVKGTSQMFLGGPPVVKAATGEEVTAEELGGADVHARVSGVADYLAEDEEEALAL 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863 287 TRKVVRNLNYQKKLDVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFARIFGYP 366
Cdd:COG4799 236 ARRLLSYLPSNNLEDPPRAEPAPPARDPEELYGIVPEDPRKPYDMREVIARLVDGGSFFEFKPLYGPNIVTGFARIDGRP 315
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863 367 VGIVGNN-----GVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAVACAQVPKITLII 441
Cdd:COG4799 316 VGIVANQpmvlaGVLDIDAADKAARFIRLCDAFNIPLVFLVDVPGFMVGTEQERGGIIRHGAKLLYAVAEATVPKITVIL 395
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863 442 GGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAANVLATITKDQraregkqfsSADEAALKEPIIKKFEEEGNPYY 521
Cdd:COG4799 396 RKAYGAGYYAMCGKALGPDFLFAWPTAEIAVMGGEGAANVLYRRELAA---------AEDPEALRAELIAEYEEQANPYY 466
                       490       500       510       520
                ....*....|....*....|....*....|....*....|..
gi 11545863 522 SSARVWDDGIIDPADTRLVLGLSFSAALNAPIEKTD--FGIF 561
Cdd:COG4799 467 AAARGWIDDVIDPRDTRRVLARALEAAANKPEERPPkkHGVI 508
Carboxyl_trans pfam01039
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
77-554 1.25e-178

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


Pssm-ID: 426008 [Multi-domain]  Cd Length: 491  Bit Score: 512.96  E-value: 1.25e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863    77 SRGKLLPRERIDNLIDPGSpFLELSQFAGYQLYDN--EEVPGGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQL 154
Cdd:pfam01039   4 PRGKLTARERIDLLLDPGS-FGELEDLFFHRATEFgrKRIPRDGVVTGSGAVIGRAVEVVAQDFTVFGGSLGPAKGEKIL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   155 RAQEIAMQNRLPCIYLVDSGGAylpRQADVFPDRDHFGRTFYNQAIMSSKnIAQIAVVMGSCTAGGAYVPAMADENIIVR 234
Cdd:pfam01039  83 RAMEIAIKTGLPLIGINDSGGA---RIQEGVENLRGSGKIFGRNSLASGV-IPQISLIMGPCAGGGAYLPALGDFVIMVE 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   235 KQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKK---LDVTIEPSEEPL 311
Cdd:pfam01039 159 GTSPMFLTGPPVIKKVTGEEVTSEELGGATQHMTISGVSHLTALDDEDALELIRKWLSYLPKPAPnnrEPVPIVPTKDPP 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   312 FPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFARIFGYPVGIVGNN-----GVLFSESAKKGTH 386
Cdd:pfam01039 239 DRDAPLVSIVPDDPKKPYDVREVIAGIVDEGEFFEIKPGYAKTVVTGFARLGGIPVGVVANQprvgaGVLFPDSADKAAR 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   387 FVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWP 466
Cdd:pfam01039 319 FIRDCDAFNLPLVILADVPGFLPGQRQEYGGILKHGAKLLYALAEATVPKITVIPRKAYGGAYVVMDSKINGADINFAWP 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   467 NARISVMGGEQAANVLATITKDQRAREGKqfssaDEAALKEPIIKKFEEE-GNPYYSSARVWDDGIIDPADTRLVLGLSF 545
Cdd:pfam01039 399 TARIAVMGPEGAVEIKFRKEKAAAEMRGK-----DLAATRKQKIAEYEEElSPPYVAAARGFADAVIDPGRTRAKLVIAL 473

                  ....*....
gi 11545863   546 SAALNAPIE 554
Cdd:pfam01039 474 AALWTKPRF 482
 
Name Accession Description Interval E-value
PLN02820 PLN02820
3-methylcrotonyl-CoA carboxylase, beta chain
36-563 0e+00

3-methylcrotonyl-CoA carboxylase, beta chain


Pssm-ID: 178415 [Multi-domain]  Cd Length: 569  Bit Score: 895.70  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   36 DLGSALYQENYKQMKALVNQLHERVEHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDnEEVP 115
Cdd:PLN02820  37 DRNSDAFSANSKAMEGLLSELRSHVAKVRAGGGPEAVKRHRSRNKLLPRERIDRLLDPGSPFLELSQLAGHELYG-EDLP 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  116 GGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFPDRDHFGRTF 195
Cdd:PLN02820 116 SGGIVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCRLPCIYLVDSGGANLPRQAEVFPDRDHFGRIF 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  196 YNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDH 275
Cdd:PLN02820 196 YNQARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLAGPPLVKAATGEEVSAEDLGGADVHCKVSGVSDH 275
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  276 WALDDHHALHLTRKVVRNL------NYQKKLDVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKA 349
Cdd:PLN02820 276 FAQDELHALAIGRNIVKNLhlaakqGMENTLGSKNPEYKEPLYDVKELRGIVPADHKQSFDVRSVIARIVDGSEFDEFKK 355
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  350 FYGDTLVTGFARIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAV 429
Cdd:PLN02820 356 NYGTTLVTGFARIYGQPVGIIGNNGILFTESALKGAHFIELCAQRGIPLLFLQNITGFMVGSRSEASGIAKAGAKMVMAV 435
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  430 ACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPI 509
Cdd:PLN02820 436 ACAKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKT 515
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 11545863  510 IKKFEEEGNPYYSSARVWDDGIIDPADTRLVLGLSFSAALNAPIEKTDFGIFRM 563
Cdd:PLN02820 516 VEAYEREANPYYSTARLWDDGVIDPADTRRVLGLCLSAALNRSPEDTKFGVFRM 569
MmdA COG4799
Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];
48-561 0e+00

Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];


Pssm-ID: 443827 [Multi-domain]  Cd Length: 508  Bit Score: 762.64  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863  48 QMKALVNQLHERVEHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSpFLELSQFAGYQLYD-NEEVPGGGIITGIGRV 126
Cdd:COG4799   1 AMRALLAELRARREEALLGGGEKAIERQHARGKLTARERIDLLLDPGS-FLELGALAGHRMYDdDDRVPGDGVVTGIGTV 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863 127 SGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFpdrDHFGRTFYNQAiMSSKNI 206
Cdd:COG4799  80 DGRPVVVVANDFTVKGGSLGPMTAKKILRAQDIALENGLPVIYLVDSGGARLQEGVESF---AGYGRIFYRNA-RSSGGI 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863 207 AQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHL 286
Cdd:COG4799 156 PQISVIMGPCAAGGAYSPALSDFVIMVKGTSQMFLGGPPVVKAATGEEVTAEELGGADVHARVSGVADYLAEDEEEALAL 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863 287 TRKVVRNLNYQKKLDVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFARIFGYP 366
Cdd:COG4799 236 ARRLLSYLPSNNLEDPPRAEPAPPARDPEELYGIVPEDPRKPYDMREVIARLVDGGSFFEFKPLYGPNIVTGFARIDGRP 315
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863 367 VGIVGNN-----GVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAVACAQVPKITLII 441
Cdd:COG4799 316 VGIVANQpmvlaGVLDIDAADKAARFIRLCDAFNIPLVFLVDVPGFMVGTEQERGGIIRHGAKLLYAVAEATVPKITVIL 395
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863 442 GGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAANVLATITKDQraregkqfsSADEAALKEPIIKKFEEEGNPYY 521
Cdd:COG4799 396 RKAYGAGYYAMCGKALGPDFLFAWPTAEIAVMGGEGAANVLYRRELAA---------AEDPEALRAELIAEYEEQANPYY 466
                       490       500       510       520
                ....*....|....*....|....*....|....*....|..
gi 11545863 522 SSARVWDDGIIDPADTRLVLGLSFSAALNAPIEKTD--FGIF 561
Cdd:COG4799 467 AAARGWIDDVIDPRDTRRVLARALEAAANKPEERPPkkHGVI 508
Carboxyl_trans pfam01039
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
77-554 1.25e-178

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


Pssm-ID: 426008 [Multi-domain]  Cd Length: 491  Bit Score: 512.96  E-value: 1.25e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863    77 SRGKLLPRERIDNLIDPGSpFLELSQFAGYQLYDN--EEVPGGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQL 154
Cdd:pfam01039   4 PRGKLTARERIDLLLDPGS-FGELEDLFFHRATEFgrKRIPRDGVVTGSGAVIGRAVEVVAQDFTVFGGSLGPAKGEKIL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   155 RAQEIAMQNRLPCIYLVDSGGAylpRQADVFPDRDHFGRTFYNQAIMSSKnIAQIAVVMGSCTAGGAYVPAMADENIIVR 234
Cdd:pfam01039  83 RAMEIAIKTGLPLIGINDSGGA---RIQEGVENLRGSGKIFGRNSLASGV-IPQISLIMGPCAGGGAYLPALGDFVIMVE 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   235 KQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKK---LDVTIEPSEEPL 311
Cdd:pfam01039 159 GTSPMFLTGPPVIKKVTGEEVTSEELGGATQHMTISGVSHLTALDDEDALELIRKWLSYLPKPAPnnrEPVPIVPTKDPP 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   312 FPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFARIFGYPVGIVGNN-----GVLFSESAKKGTH 386
Cdd:pfam01039 239 DRDAPLVSIVPDDPKKPYDVREVIAGIVDEGEFFEIKPGYAKTVVTGFARLGGIPVGVVANQprvgaGVLFPDSADKAAR 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   387 FVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWP 466
Cdd:pfam01039 319 FIRDCDAFNLPLVILADVPGFLPGQRQEYGGILKHGAKLLYALAEATVPKITVIPRKAYGGAYVVMDSKINGADINFAWP 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11545863   467 NARISVMGGEQAANVLATITKDQRAREGKqfssaDEAALKEPIIKKFEEE-GNPYYSSARVWDDGIIDPADTRLVLGLSF 545
Cdd:pfam01039 399 TARIAVMGPEGAVEIKFRKEKAAAEMRGK-----DLAATRKQKIAEYEEElSPPYVAAARGFADAVIDPGRTRAKLVIAL 473

                  ....*....
gi 11545863   546 SAALNAPIE 554
Cdd:pfam01039 474 AALWTKPRF 482
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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