NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|153791662|ref|NP_075054|]
View 

coiled-coil domain-containing protein 71 [Homo sapiens]

Protein Classification

CCDC71L domain-containing protein( domain architecture ID 10634080)

CCDC71L domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
CCDC71L pfam15374
Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing ...
8-461 0e+00

Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing protein 71L, is a domain of unknown function, which is found in eukaryotes.


:

Pssm-ID: 464682  Cd Length: 383  Bit Score: 538.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662    8 VEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSATEAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTANPPSQTKLQ 87
Cdd:pfam15374   1 VEEKAVHSWSRISSAGQKALEEALRVFNPMSKDLSDTETQLVAFLQGLREEGYQPTILRSKDVYGYSSCTARTPSQTKLS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662   88 ARAPNPTATSPPASAPRTAMRLPAGRATLLPMPLSGRLAKASTPALAKHATTNLLLSSLKQSSASHARGAAVGFPTHLYP 167
Cdd:pfam15374  81 ARDTSPAATSTPAKAPATAARLPMAKATLLPMALSVSLAKGSTPPLSKHASTNLLLNSLKQTSASTSKGATVGFPAHLYP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662  168 GVYPAMRLSVVLEALVPLKTPMPCLGAKHKAQSLQLSLADSPLKLRKSSgkgpGNPRPKAPRKTTSKGPKCLTRKGPGA- 246
Cdd:pfam15374 161 GVYPAMRLSVVLEALVPLKTPTSCLEAKHKAGSLQLGLANSPLKLRKAS----GNPRPKASGKTTSKGPKALTKKGPSSa 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662  247 --------GPRRGSGHQSKTNRATGSPSVRrmkggsaLGTKTAQAKVARTLAKAARAQAkvartqakaakarakakaaqv 318
Cdd:pfam15374 237 tlalvllkGPNGGVLQESNACKASGVLNGR-------ISTSSSQACAGASVAKALRIKA--------------------- 288
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662  319 kakakakaaqvkakakvmaawakakakakavrakakvartqprgrgrpKGSAKARTTRKGQKNRPETVGQKRKRAEEAKD 398
Cdd:pfam15374 289 ------------------------------------------------KESVVGRTGWKDQSSDQETVGQKRKRAEEVKE 320
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 153791662  399 LPPKKRTRLGPRSPKAWLGPGTAKLLKFRAIKVDRRSSDDEVRQRAQRILRVNLSPVIRLQPL 461
Cdd:pfam15374 321 LPPKKKTRSVPQSPKSWLGPGTLNLLKFKAIKVDRSSSDDEVRRKAQKILRVNLSPVIRIQPL 383
 
Name Accession Description Interval E-value
CCDC71L pfam15374
Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing ...
8-461 0e+00

Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing protein 71L, is a domain of unknown function, which is found in eukaryotes.


Pssm-ID: 464682  Cd Length: 383  Bit Score: 538.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662    8 VEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSATEAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTANPPSQTKLQ 87
Cdd:pfam15374   1 VEEKAVHSWSRISSAGQKALEEALRVFNPMSKDLSDTETQLVAFLQGLREEGYQPTILRSKDVYGYSSCTARTPSQTKLS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662   88 ARAPNPTATSPPASAPRTAMRLPAGRATLLPMPLSGRLAKASTPALAKHATTNLLLSSLKQSSASHARGAAVGFPTHLYP 167
Cdd:pfam15374  81 ARDTSPAATSTPAKAPATAARLPMAKATLLPMALSVSLAKGSTPPLSKHASTNLLLNSLKQTSASTSKGATVGFPAHLYP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662  168 GVYPAMRLSVVLEALVPLKTPMPCLGAKHKAQSLQLSLADSPLKLRKSSgkgpGNPRPKAPRKTTSKGPKCLTRKGPGA- 246
Cdd:pfam15374 161 GVYPAMRLSVVLEALVPLKTPTSCLEAKHKAGSLQLGLANSPLKLRKAS----GNPRPKASGKTTSKGPKALTKKGPSSa 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662  247 --------GPRRGSGHQSKTNRATGSPSVRrmkggsaLGTKTAQAKVARTLAKAARAQAkvartqakaakarakakaaqv 318
Cdd:pfam15374 237 tlalvllkGPNGGVLQESNACKASGVLNGR-------ISTSSSQACAGASVAKALRIKA--------------------- 288
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662  319 kakakakaaqvkakakvmaawakakakakavrakakvartqprgrgrpKGSAKARTTRKGQKNRPETVGQKRKRAEEAKD 398
Cdd:pfam15374 289 ------------------------------------------------KESVVGRTGWKDQSSDQETVGQKRKRAEEVKE 320
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 153791662  399 LPPKKRTRLGPRSPKAWLGPGTAKLLKFRAIKVDRRSSDDEVRQRAQRILRVNLSPVIRLQPL 461
Cdd:pfam15374 321 LPPKKKTRSVPQSPKSWLGPGTLNLLKFKAIKVDRSSSDDEVRRKAQKILRVNLSPVIRIQPL 383
 
Name Accession Description Interval E-value
CCDC71L pfam15374
Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing ...
8-461 0e+00

Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing protein 71L, is a domain of unknown function, which is found in eukaryotes.


Pssm-ID: 464682  Cd Length: 383  Bit Score: 538.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662    8 VEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSATEAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTANPPSQTKLQ 87
Cdd:pfam15374   1 VEEKAVHSWSRISSAGQKALEEALRVFNPMSKDLSDTETQLVAFLQGLREEGYQPTILRSKDVYGYSSCTARTPSQTKLS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662   88 ARAPNPTATSPPASAPRTAMRLPAGRATLLPMPLSGRLAKASTPALAKHATTNLLLSSLKQSSASHARGAAVGFPTHLYP 167
Cdd:pfam15374  81 ARDTSPAATSTPAKAPATAARLPMAKATLLPMALSVSLAKGSTPPLSKHASTNLLLNSLKQTSASTSKGATVGFPAHLYP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662  168 GVYPAMRLSVVLEALVPLKTPMPCLGAKHKAQSLQLSLADSPLKLRKSSgkgpGNPRPKAPRKTTSKGPKCLTRKGPGA- 246
Cdd:pfam15374 161 GVYPAMRLSVVLEALVPLKTPTSCLEAKHKAGSLQLGLANSPLKLRKAS----GNPRPKASGKTTSKGPKALTKKGPSSa 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662  247 --------GPRRGSGHQSKTNRATGSPSVRrmkggsaLGTKTAQAKVARTLAKAARAQAkvartqakaakarakakaaqv 318
Cdd:pfam15374 237 tlalvllkGPNGGVLQESNACKASGVLNGR-------ISTSSSQACAGASVAKALRIKA--------------------- 288
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791662  319 kakakakaaqvkakakvmaawakakakakavrakakvartqprgrgrpKGSAKARTTRKGQKNRPETVGQKRKRAEEAKD 398
Cdd:pfam15374 289 ------------------------------------------------KESVVGRTGWKDQSSDQETVGQKRKRAEEVKE 320
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 153791662  399 LPPKKRTRLGPRSPKAWLGPGTAKLLKFRAIKVDRRSSDDEVRQRAQRILRVNLSPVIRLQPL 461
Cdd:pfam15374 321 LPPKKKTRSVPQSPKSWLGPGTLNLLKFKAIKVDRSSSDDEVRRKAQKILRVNLSPVIRIQPL 383
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH