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Conserved domains on  [gi|612407788|ref|NP_077292|]
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leukocyte receptor cluster member 1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FdhE super family cl19312
Protein involved in formate dehydrogenase formation; The function of these proteins is unknown. ...
 192-262 3.88e-03

Protein involved in formate dehydrogenase formation; The function of these proteins is unknown. They may possibly be involved in the formation of formate dehydrogenase.


The actual alignment was detected with superfamily member pfam04216:

Pssm-ID: 450291  Cd Length: 286  Bit Score: 37.99  E-value: 3.88e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 612407788  192 EPPSLDQLRAERLRREAAERSRAE-----ALLARVQGRALQEGQPEEDETDDRRRRYNSQFNPQLARRPRQQDPHL 262
Cdd:pfam04216  10 DPATLFARRAARLRQLAEGHPLADylrflAGLADAQQAALAGLPAPAPPDAEAIERAREHGMPPLDAAGLIRDPAW 85
 
Name Accession Description Interval E-value
FdhE pfam04216
Protein involved in formate dehydrogenase formation; The function of these proteins is unknown. ...
 192-262 3.88e-03

Protein involved in formate dehydrogenase formation; The function of these proteins is unknown. They may possibly be involved in the formation of formate dehydrogenase.


Pssm-ID: 427792  Cd Length: 286  Bit Score: 37.99  E-value: 3.88e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 612407788  192 EPPSLDQLRAERLRREAAERSRAE-----ALLARVQGRALQEGQPEEDETDDRRRRYNSQFNPQLARRPRQQDPHL 262
Cdd:pfam04216  10 DPATLFARRAARLRQLAEGHPLADylrflAGLADAQQAALAGLPAPAPPDAEAIERAREHGMPPLDAAGLIRDPAW 85
 
Name Accession Description Interval E-value
FdhE pfam04216
Protein involved in formate dehydrogenase formation; The function of these proteins is unknown. ...
 192-262 3.88e-03

Protein involved in formate dehydrogenase formation; The function of these proteins is unknown. They may possibly be involved in the formation of formate dehydrogenase.


Pssm-ID: 427792  Cd Length: 286  Bit Score: 37.99  E-value: 3.88e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 612407788  192 EPPSLDQLRAERLRREAAERSRAE-----ALLARVQGRALQEGQPEEDETDDRRRRYNSQFNPQLARRPRQQDPHL 262
Cdd:pfam04216  10 DPATLFARRAARLRQLAEGHPLADylrflAGLADAQQAALAGLPAPAPPDAEAIERAREHGMPPLDAAGLIRDPAW 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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