NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|13775178|ref|NP_112563|]
View 

testis-expressed protein 13B [Homo sapiens]

Protein Classification

TEX13 domain-containing protein( domain architecture ID 10633546)

TEX13 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
TEX13 pfam15186
Testis-expressed sequence 13 protein family; The function of this family of proteins has not, ...
 5-154 9.62e-94

Testis-expressed sequence 13 protein family; The function of this family of proteins has not, as yet, been determined. However, members are thought to be encoded for by spermatogonially-expressed, germ-cell-specific genes. This family of proteins is found in eukaryotes. Proteins in this family are typically between 177 and 384 amino acids in length. There are two conserved sequence motifs: FIN and LAL.


:

Pssm-ID: 464551 [Multi-domain]  Cd Length: 150  Bit Score: 274.54  E-value: 9.62e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13775178     5 PEDPSSGFRHGNVVAFIIEKMARHTKGPEFYFENISLSWEEVEDKLRAILEDSEVPSEVKEACTWGSLALGVRFAHRQGQ 84
Cdd:pfam15186   1 FGDPSSGFRHGEVVAFINEEVLRNGGGPEFYLENRSLSWEEVEDKLRAILEDPEVPREAKEACAWSALALGVRFAARQRE 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13775178    85 LQNRRVQWLQGFAKLHRSAALVLASNLTELKEQQEMECNEATFQLQLTETSLAEVQRERDMLRWKLFHAE 154
Cdd:pfam15186  81 LQARRVQWLQDQAEEHESATWALASELQRLREQQEMERKEAAFQLQLTQAALAQVQKERDLLRWKLLQAE 150
 
Name Accession Description Interval E-value
TEX13 pfam15186
Testis-expressed sequence 13 protein family; The function of this family of proteins has not, ...
 5-154 9.62e-94

Testis-expressed sequence 13 protein family; The function of this family of proteins has not, as yet, been determined. However, members are thought to be encoded for by spermatogonially-expressed, germ-cell-specific genes. This family of proteins is found in eukaryotes. Proteins in this family are typically between 177 and 384 amino acids in length. There are two conserved sequence motifs: FIN and LAL.


Pssm-ID: 464551 [Multi-domain]  Cd Length: 150  Bit Score: 274.54  E-value: 9.62e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13775178     5 PEDPSSGFRHGNVVAFIIEKMARHTKGPEFYFENISLSWEEVEDKLRAILEDSEVPSEVKEACTWGSLALGVRFAHRQGQ 84
Cdd:pfam15186   1 FGDPSSGFRHGEVVAFINEEVLRNGGGPEFYLENRSLSWEEVEDKLRAILEDPEVPREAKEACAWSALALGVRFAARQRE 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13775178    85 LQNRRVQWLQGFAKLHRSAALVLASNLTELKEQQEMECNEATFQLQLTETSLAEVQRERDMLRWKLFHAE 154
Cdd:pfam15186  81 LQARRVQWLQDQAEEHESATWALASELQRLREQQEMERKEAAFQLQLTQAALAQVQKERDLLRWKLLQAE 150
 
Name Accession Description Interval E-value
TEX13 pfam15186
Testis-expressed sequence 13 protein family; The function of this family of proteins has not, ...
 5-154 9.62e-94

Testis-expressed sequence 13 protein family; The function of this family of proteins has not, as yet, been determined. However, members are thought to be encoded for by spermatogonially-expressed, germ-cell-specific genes. This family of proteins is found in eukaryotes. Proteins in this family are typically between 177 and 384 amino acids in length. There are two conserved sequence motifs: FIN and LAL.


Pssm-ID: 464551 [Multi-domain]  Cd Length: 150  Bit Score: 274.54  E-value: 9.62e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13775178     5 PEDPSSGFRHGNVVAFIIEKMARHTKGPEFYFENISLSWEEVEDKLRAILEDSEVPSEVKEACTWGSLALGVRFAHRQGQ 84
Cdd:pfam15186   1 FGDPSSGFRHGEVVAFINEEVLRNGGGPEFYLENRSLSWEEVEDKLRAILEDPEVPREAKEACAWSALALGVRFAARQRE 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13775178    85 LQNRRVQWLQGFAKLHRSAALVLASNLTELKEQQEMECNEATFQLQLTETSLAEVQRERDMLRWKLFHAE 154
Cdd:pfam15186  81 LQARRVQWLQDQAEEHESATWALASELQRLREQQEMERKEAAFQLQLTQAALAQVQKERDLLRWKLLQAE 150
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH