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Conserved domains on  [gi|16077284|ref|NP_388097|]
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conserved protein of unknown function [Bacillus subtilis subsp. subtilis str. 168]

Protein Classification

YbeF family protein( domain architecture ID 10566809)

YbeF family protein is a DUF2651 domain-containing protein; similar to Bacillus subtilis protein YbeF

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2651 pfam10852
Protein of unknown function (DUF2651); This family of proteins with unknown function appears ...
 6-78 5.56e-18

Protein of unknown function (DUF2651); This family of proteins with unknown function appears to be restricted to Bacillus spp.


:

Pssm-ID: 371270  Cd Length: 73  Bit Score: 70.43  E-value: 5.56e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16077284    6 IAFFILPLGIMLLSIVGTCICKNPYLMPMLSLVISLVLTFTIFNQSFLGWAVVYSLVSLALSYITLIVVRKRK 78
Cdd:pfam10852  1 LILFILPLLIFIISIVGTALFKTPYIMPMITFAISLILTFAYFNPSFFFWVIMYTILSFITSYITLIIVRKYK 73
 
Name Accession Description Interval E-value
DUF2651 pfam10852
Protein of unknown function (DUF2651); This family of proteins with unknown function appears ...
 6-78 5.56e-18

Protein of unknown function (DUF2651); This family of proteins with unknown function appears to be restricted to Bacillus spp.


Pssm-ID: 371270  Cd Length: 73  Bit Score: 70.43  E-value: 5.56e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16077284    6 IAFFILPLGIMLLSIVGTCICKNPYLMPMLSLVISLVLTFTIFNQSFLGWAVVYSLVSLALSYITLIVVRKRK 78
Cdd:pfam10852  1 LILFILPLLIFIISIVGTALFKTPYIMPMITFAISLILTFAYFNPSFFFWVIMYTILSFITSYITLIIVRKYK 73
 
Name Accession Description Interval E-value
DUF2651 pfam10852
Protein of unknown function (DUF2651); This family of proteins with unknown function appears ...
 6-78 5.56e-18

Protein of unknown function (DUF2651); This family of proteins with unknown function appears to be restricted to Bacillus spp.


Pssm-ID: 371270  Cd Length: 73  Bit Score: 70.43  E-value: 5.56e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16077284    6 IAFFILPLGIMLLSIVGTCICKNPYLMPMLSLVISLVLTFTIFNQSFLGWAVVYSLVSLALSYITLIVVRKRK 78
Cdd:pfam10852  1 LILFILPLLIFIISIVGTALFKTPYIMPMITFAISLILTFAYFNPSFFFWVIMYTILSFITSYITLIIVRKYK 73
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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