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Conserved domains on  [gi|16905135|ref|NP_473440|]
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UPF0488 protein C8orf33 homolog isoform 2 [Mus musculus]

Protein Classification

DUF4615 domain-containing protein( domain architecture ID 10634119)

DUF4615 domain-containing protein similar to Homo sapiens UPF0488 protein C8orf33

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4615 pfam15393
Domain of unknown function (DUF4615); This protein family is a domain of unknown function, ...
 40-159 1.23e-48

Domain of unknown function (DUF4615); This protein family is a domain of unknown function, which is found in eukaryotes. Proteins in this family are typically between 161 and 229 amino acids in length. There is a single completely conserved residue F that may be functionally important.


:

Pssm-ID: 464700  Cd Length: 132  Bit Score: 153.26  E-value: 1.23e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16905135    40 QLARELAWCVEQLELGLKTQRPTPKQKEQAVGAIRTLRSEKTPLPRKRQLMRSLFGDYRAQMDAEWREALRALKAATHSA 119
Cdd:pfam15393   1 QFERELCWCVEQLELGLKTQKLTPKQVEEASKALKTLRSPKAPLVKKRQLMRTTFGDYRKKMAEEERKQLRLAQSAIKFA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 16905135   120 QVqlvsEATRKKSGRVCRPRPAERAKTTP----------------DLTSEEFRFNF 159
Cdd:pfam15393  81 QV----ESPRKKSKRVFRKKAALLSGGKDfrfsakeasntdsfvfTPSDEEFKFNF 132
 
Name Accession Description Interval E-value
DUF4615 pfam15393
Domain of unknown function (DUF4615); This protein family is a domain of unknown function, ...
 40-159 1.23e-48

Domain of unknown function (DUF4615); This protein family is a domain of unknown function, which is found in eukaryotes. Proteins in this family are typically between 161 and 229 amino acids in length. There is a single completely conserved residue F that may be functionally important.


Pssm-ID: 464700  Cd Length: 132  Bit Score: 153.26  E-value: 1.23e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16905135    40 QLARELAWCVEQLELGLKTQRPTPKQKEQAVGAIRTLRSEKTPLPRKRQLMRSLFGDYRAQMDAEWREALRALKAATHSA 119
Cdd:pfam15393   1 QFERELCWCVEQLELGLKTQKLTPKQVEEASKALKTLRSPKAPLVKKRQLMRTTFGDYRKKMAEEERKQLRLAQSAIKFA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 16905135   120 QVqlvsEATRKKSGRVCRPRPAERAKTTP----------------DLTSEEFRFNF 159
Cdd:pfam15393  81 QV----ESPRKKSKRVFRKKAALLSGGKDfrfsakeasntdsfvfTPSDEEFKFNF 132
 
Name Accession Description Interval E-value
DUF4615 pfam15393
Domain of unknown function (DUF4615); This protein family is a domain of unknown function, ...
 40-159 1.23e-48

Domain of unknown function (DUF4615); This protein family is a domain of unknown function, which is found in eukaryotes. Proteins in this family are typically between 161 and 229 amino acids in length. There is a single completely conserved residue F that may be functionally important.


Pssm-ID: 464700  Cd Length: 132  Bit Score: 153.26  E-value: 1.23e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16905135    40 QLARELAWCVEQLELGLKTQRPTPKQKEQAVGAIRTLRSEKTPLPRKRQLMRSLFGDYRAQMDAEWREALRALKAATHSA 119
Cdd:pfam15393   1 QFERELCWCVEQLELGLKTQKLTPKQVEEASKALKTLRSPKAPLVKKRQLMRTTFGDYRKKMAEEERKQLRLAQSAIKFA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 16905135   120 QVqlvsEATRKKSGRVCRPRPAERAKTTP----------------DLTSEEFRFNF 159
Cdd:pfam15393  81 QV----ESPRKKSKRVFRKKAALLSGGKDfrfsakeasntdsfvfTPSDEEFKFNF 132
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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