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Conserved domains on  [gi|17158011|ref|NP_478062|]
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small integral membrane protein 11 [Homo sapiens]

Protein Classification

FAM165 domain-containing protein( domain architecture ID 10633178)

FAM165 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FAM165 pfam14981
FAM165 family; This family of proteins known as FAM165 are found in eukaryotes. Members of ...
6-53 9.07e-13

FAM165 family; This family of proteins known as FAM165 are found in eukaryotes. Members of this family are as yet uncharacterized. Proteins in this family are typically short membrane proteins between 55 and 70 amino acids in length.


:

Pssm-ID: 464419  Cd Length: 49  Bit Score: 55.67  E-value: 9.07e-13
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 17158011    6 LEHVPLLLYILAAKTLILCLTFAGVKMYQRKRLEAKQQKLEAERKKQS 53
Cdd:pfam14981  2 LENFPLLLYILAAKTLILCLAFAGVKMYQSKKLEAQLKKKLEEKQKKT 49
 
Name Accession Description Interval E-value
FAM165 pfam14981
FAM165 family; This family of proteins known as FAM165 are found in eukaryotes. Members of ...
6-53 9.07e-13

FAM165 family; This family of proteins known as FAM165 are found in eukaryotes. Members of this family are as yet uncharacterized. Proteins in this family are typically short membrane proteins between 55 and 70 amino acids in length.


Pssm-ID: 464419  Cd Length: 49  Bit Score: 55.67  E-value: 9.07e-13
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 17158011    6 LEHVPLLLYILAAKTLILCLTFAGVKMYQRKRLEAKQQKLEAERKKQS 53
Cdd:pfam14981  2 LENFPLLLYILAAKTLILCLAFAGVKMYQSKKLEAQLKKKLEEKQKKT 49
 
Name Accession Description Interval E-value
FAM165 pfam14981
FAM165 family; This family of proteins known as FAM165 are found in eukaryotes. Members of ...
6-53 9.07e-13

FAM165 family; This family of proteins known as FAM165 are found in eukaryotes. Members of this family are as yet uncharacterized. Proteins in this family are typically short membrane proteins between 55 and 70 amino acids in length.


Pssm-ID: 464419  Cd Length: 49  Bit Score: 55.67  E-value: 9.07e-13
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 17158011    6 LEHVPLLLYILAAKTLILCLTFAGVKMYQRKRLEAKQQKLEAERKKQS 53
Cdd:pfam14981  2 LENFPLLLYILAAKTLILCLAFAGVKMYQSKKLEAQLKKKLEEKQKKT 49
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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