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Conserved domains on  [gi|17507075|ref|NP_491024|]
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Anther-specific protein BCP1-like [Caenorhabditis elegans]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PTZ00144 super family cl36517
dihydrolipoamide succinyltransferase; Provisional
 7-83 7.74e-03

dihydrolipoamide succinyltransferase; Provisional


The actual alignment was detected with superfamily member PTZ00144:

Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 33.89  E-value: 7.74e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 17507075    7 TVLVVLSLLAMFVAQEVAEEALTDPEAAEADNAKNNATDAPADATPGSGSDAPAAPEGSGAEAEATTAKSSTAAVTI 83
Cdd:PTZ00144 108 TVEVGAPLSEIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVAR 184
 
Name Accession Description Interval E-value
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 7-83 7.74e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 33.89  E-value: 7.74e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 17507075    7 TVLVVLSLLAMFVAQEVAEEALTDPEAAEADNAKNNATDAPADATPGSGSDAPAAPEGSGAEAEATTAKSSTAAVTI 83
Cdd:PTZ00144 108 TVEVGAPLSEIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVAR 184
 
Name Accession Description Interval E-value
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 7-83 7.74e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 33.89  E-value: 7.74e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 17507075    7 TVLVVLSLLAMFVAQEVAEEALTDPEAAEADNAKNNATDAPADATPGSGSDAPAAPEGSGAEAEATTAKSSTAAVTI 83
Cdd:PTZ00144 108 TVEVGAPLSEIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVAR 184
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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