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Conserved domains on  [gi|25149023|ref|NP_498454|]
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Differentially expressed in FDCP 8 homolog [Caenorhabditis elegans]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
zf-RING_9 pfam13901
Putative zinc-RING and/or ribbon; This is a family of cysteine-rich proteins. Many members ...
259-467 8.36e-76

Putative zinc-RING and/or ribbon; This is a family of cysteine-rich proteins. Many members also carry a pleckstrin-homology domain, pfam00169


:

Pssm-ID: 464030  Cd Length: 205  Bit Score: 236.74  E-value: 8.36e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25149023   259 RLCDYSGELFCPNCHWNDVWSIPARIVHNLDSTPRPVCRAVKQLLAIIDHRPLIDINESTLSLIKFHKELRRVNELRRNF 338
Cdd:pfam13901   1 RLCDYTGKYYCSGCHWNDTSVIPARILHNWDFKKYPVSKFAKQLLDSIYSQPLLNLSDLNPSLYSKVKELAKVRELREQL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25149023   339 LLMKCYFVSCRTARRLRILQYLNAHS--HFVDNSVMYSPKELRELCDGTLLPDLEQIHTVFRKHIeEECETCAGNGFFCE 416
Cdd:pfam13901  81 KLLKDYLKTCRFAAEEELLKLFRLRPrhHLLEDSHLYSLQDLVDIKNGSLLPFLEELVQFAEKHV-TNCELCQGKGFICE 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 25149023   417 LCDDinvdqkNKILYPF-TENTRSCATCLAVYHKKCFERKSLNCPRCERRRK 467
Cdd:pfam13901 160 LCNS------DDIIFPFdIDTTSRCEKCKAVFHKSCFRSGASPCPKCERLQK 205
C1_DEF8 cd20819
protein kinase C conserved region 1 (C1 domain) found in differentially expressed in FDCP 8 ...
160-216 4.53e-21

protein kinase C conserved region 1 (C1 domain) found in differentially expressed in FDCP 8 (DEF-8) and similar proteins; DEF-8 positively regulates lysosome peripheral distribution and ruffled border formation in osteoclasts. It is involved in bone resorption. DEF-8 contains a protein kinase C conserved region 1 (C1) domain followed by a putative zinc-RING and/or ribbon. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.


:

Pssm-ID: 410369  Cd Length: 62  Bit Score: 86.56  E-value: 4.53e-21
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 25149023 160 GHEFVMQPVRGGHNPCCEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVCAGVL 216
Cdd:cd20819   5 GHHFVLQKSKSSSKQYCDKCCGIIWGLLQTWYRCTDCGYRCHSKCLNSITRTCASVK 61
 
Name Accession Description Interval E-value
zf-RING_9 pfam13901
Putative zinc-RING and/or ribbon; This is a family of cysteine-rich proteins. Many members ...
259-467 8.36e-76

Putative zinc-RING and/or ribbon; This is a family of cysteine-rich proteins. Many members also carry a pleckstrin-homology domain, pfam00169


Pssm-ID: 464030  Cd Length: 205  Bit Score: 236.74  E-value: 8.36e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25149023   259 RLCDYSGELFCPNCHWNDVWSIPARIVHNLDSTPRPVCRAVKQLLAIIDHRPLIDINESTLSLIKFHKELRRVNELRRNF 338
Cdd:pfam13901   1 RLCDYTGKYYCSGCHWNDTSVIPARILHNWDFKKYPVSKFAKQLLDSIYSQPLLNLSDLNPSLYSKVKELAKVRELREQL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25149023   339 LLMKCYFVSCRTARRLRILQYLNAHS--HFVDNSVMYSPKELRELCDGTLLPDLEQIHTVFRKHIeEECETCAGNGFFCE 416
Cdd:pfam13901  81 KLLKDYLKTCRFAAEEELLKLFRLRPrhHLLEDSHLYSLQDLVDIKNGSLLPFLEELVQFAEKHV-TNCELCQGKGFICE 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 25149023   417 LCDDinvdqkNKILYPF-TENTRSCATCLAVYHKKCFERKSLNCPRCERRRK 467
Cdd:pfam13901 160 LCNS------DDIIFPFdIDTTSRCEKCKAVFHKSCFRSGASPCPKCERLQK 205
C1_DEF8 cd20819
protein kinase C conserved region 1 (C1 domain) found in differentially expressed in FDCP 8 ...
160-216 4.53e-21

protein kinase C conserved region 1 (C1 domain) found in differentially expressed in FDCP 8 (DEF-8) and similar proteins; DEF-8 positively regulates lysosome peripheral distribution and ruffled border formation in osteoclasts. It is involved in bone resorption. DEF-8 contains a protein kinase C conserved region 1 (C1) domain followed by a putative zinc-RING and/or ribbon. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.


Pssm-ID: 410369  Cd Length: 62  Bit Score: 86.56  E-value: 4.53e-21
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 25149023 160 GHEFVMQPVRGGHNPCCEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVCAGVL 216
Cdd:cd20819   5 GHHFVLQKSKSSSKQYCDKCCGIIWGLLQTWYRCTDCGYRCHSKCLNSITRTCASVK 61
C1 smart00109
Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains); Some bind phorbol ...
166-212 1.44e-08

Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains); Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains.


Pssm-ID: 197519  Cd Length: 50  Bit Score: 50.93  E-value: 1.44e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 25149023    166 QPVRGGHNPCCEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVC 212
Cdd:smart00109   4 VFRTFTKPTFCCVCRKSIWGSFKQGLRCSECKVKCHKKCADKVPKAC 50
C1_1 pfam00130
Phorbol esters/diacylglycerol binding domain (C1 domain); This domain is also known as the ...
176-212 9.81e-03

Phorbol esters/diacylglycerol binding domain (C1 domain); This domain is also known as the Protein kinase C conserved region 1 (C1) domain.


Pssm-ID: 395079  Cd Length: 53  Bit Score: 34.34  E-value: 9.81e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 25149023   176 CEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVC 212
Cdd:pfam00130  14 CDHCGEFLWGLGKQGLKCSWCKLNVHKRCHEKVPPEC 50
 
Name Accession Description Interval E-value
zf-RING_9 pfam13901
Putative zinc-RING and/or ribbon; This is a family of cysteine-rich proteins. Many members ...
259-467 8.36e-76

Putative zinc-RING and/or ribbon; This is a family of cysteine-rich proteins. Many members also carry a pleckstrin-homology domain, pfam00169


Pssm-ID: 464030  Cd Length: 205  Bit Score: 236.74  E-value: 8.36e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25149023   259 RLCDYSGELFCPNCHWNDVWSIPARIVHNLDSTPRPVCRAVKQLLAIIDHRPLIDINESTLSLIKFHKELRRVNELRRNF 338
Cdd:pfam13901   1 RLCDYTGKYYCSGCHWNDTSVIPARILHNWDFKKYPVSKFAKQLLDSIYSQPLLNLSDLNPSLYSKVKELAKVRELREQL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25149023   339 LLMKCYFVSCRTARRLRILQYLNAHS--HFVDNSVMYSPKELRELCDGTLLPDLEQIHTVFRKHIeEECETCAGNGFFCE 416
Cdd:pfam13901  81 KLLKDYLKTCRFAAEEELLKLFRLRPrhHLLEDSHLYSLQDLVDIKNGSLLPFLEELVQFAEKHV-TNCELCQGKGFICE 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 25149023   417 LCDDinvdqkNKILYPF-TENTRSCATCLAVYHKKCFERKSLNCPRCERRRK 467
Cdd:pfam13901 160 LCNS------DDIIFPFdIDTTSRCEKCKAVFHKSCFRSGASPCPKCERLQK 205
C1_DEF8 cd20819
protein kinase C conserved region 1 (C1 domain) found in differentially expressed in FDCP 8 ...
160-216 4.53e-21

protein kinase C conserved region 1 (C1 domain) found in differentially expressed in FDCP 8 (DEF-8) and similar proteins; DEF-8 positively regulates lysosome peripheral distribution and ruffled border formation in osteoclasts. It is involved in bone resorption. DEF-8 contains a protein kinase C conserved region 1 (C1) domain followed by a putative zinc-RING and/or ribbon. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.


Pssm-ID: 410369  Cd Length: 62  Bit Score: 86.56  E-value: 4.53e-21
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 25149023 160 GHEFVMQPVRGGHNPCCEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVCAGVL 216
Cdd:cd20819   5 GHHFVLQKSKSSSKQYCDKCCGIIWGLLQTWYRCTDCGYRCHSKCLNSITRTCASVK 61
C1 smart00109
Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains); Some bind phorbol ...
166-212 1.44e-08

Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains); Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains.


Pssm-ID: 197519  Cd Length: 50  Bit Score: 50.93  E-value: 1.44e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 25149023    166 QPVRGGHNPCCEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVC 212
Cdd:smart00109   4 VFRTFTKPTFCCVCRKSIWGSFKQGLRCSECKVKCHKKCADKVPKAC 50
C1 cd00029
protein kinase C conserved region 1 (C1 domain) superfamily; The C1 domain is a cysteine-rich ...
161-212 1.46e-06

protein kinase C conserved region 1 (C1 domain) superfamily; The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains. It contains the motif HX12CX2CXnCX2CX4HX2CX7C, where C and H are cysteine and histidine, respectively; X represents other residues; and n is either 13 or 14. C1 has a globular fold with two separate Zn(2+)-binding sites. It was originally discovered as lipid-binding modules in protein kinase C (PKC) isoforms. C1 domains that bind and respond to phorbol esters (PE) and diacylglycerol (DAG) are referred to as typical, and those that do not respond to PE and DAG are deemed atypical. A C1 domain may also be referred to as PKC or non-PKC C1, based on the parent protein's activity. Most C1 domain-containing non-PKC proteins act as lipid kinases and scaffolds, except PKD which acts as a protein kinase. PKC C1 domains play roles in membrane translocation and activation of the enzyme.


Pssm-ID: 410341  Cd Length: 50  Bit Score: 45.20  E-value: 1.46e-06
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 25149023 161 HEFVMQPVRGGHNpcCEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVC 212
Cdd:cd00029   1 HRFVPTTFSSPTF--CDVCGKLIWGLFKQGLKCSDCGLVCHKKCLDKAPSPC 50
C1_Sbf-like cd20827
protein kinase C conserved region 1 (C1 domain) found in the myotubularin-related protein Sbf ...
176-213 7.05e-04

protein kinase C conserved region 1 (C1 domain) found in the myotubularin-related protein Sbf and similar proteins; This group includes Drosophila melanogaster SET domain binding factor (Sbf), the single homolog of human MTMR5/MTMR13, and similar proteins, that show high sequence similarity to vertebrate myotubularin-related proteins (MTMRs) which may function as guanine nucleotide exchange factors (GEFs). Sbf is a pseudophosphatase that coordinates both phosphatidylinositol 3-phosphate (PI(3)P) turnover and Rab21 GTPase activation in an endosomal pathway that controls macrophage remodeling. It also functions as a GEF that promotes Rab21 GTPase activation associated with PI(3)P endosomes. Vertebrate MTMR5 and MTMR13 contain an N-terminal DENN domain, a PH-GRAM domain, an inactive PTP domain, a SET interaction domain, a coiled-coil domain, and a C-terminal PH domain. Members of this family contain these domains and have an additional C1 domain. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.


Pssm-ID: 410377  Cd Length: 53  Bit Score: 37.78  E-value: 7.05e-04
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 25149023 176 CEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVCA 213
Cdd:cd20827  15 CDYCSSLLWGLVKTGMRCADCGYSCHEKCLEHVPKNCT 52
C1_CHN cd20806
protein kinase C conserved region 1 (C1 domain) found in the chimaerin family; Chimaerins are ...
161-212 2.05e-03

protein kinase C conserved region 1 (C1 domain) found in the chimaerin family; Chimaerins are a family of phorbolester- and diacylglycerol-responsive GTPase activating proteins (GAPs) specific for the Rho-like GTPase Rac. Alpha1-chimerin (formerly known as N-chimerin) and alpha2-chimerin are alternatively spliced products of a single gene, as are beta1- and beta2-chimerin. Alpha1- and beta1-chimerin have a relatively short N-terminal region that does not encode any recognizable domains, whereas alpha2- and beta2-chimerin both include a functional SH2 domain that can bind to phosphotyrosine motifs within receptors. All the isoforms contain a GAP domain with specificity in vitro for Rac1 and a diacylglycerol (DAG)-binding C1 domain which allows them to translocate to membranes in response to DAG signaling and anchors them in close proximity to activated Rac. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.


Pssm-ID: 410356  Cd Length: 53  Bit Score: 36.13  E-value: 2.05e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 25149023 161 HEFVMQPVRGGHnpCCEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVC 212
Cdd:cd20806   2 HNFKVHTFKGPH--WCDYCGNFMWGLIAQGVKCEDCGFNAHKQCSKLVPHDC 51
C1_PKD3_rpt1 cd20841
first protein kinase C conserved region 1 (C1 domain) found in protein kinase D3 (PKD3) and ...
176-219 2.43e-03

first protein kinase C conserved region 1 (C1 domain) found in protein kinase D3 (PKD3) and similar proteins; PKD3 is also called PRKD3, PRKCN, serine/threonine-protein kinase D3 (nPKC-D3), protein kinase C nu type (nPKC-nu), or protein kinase EPK2. It converts transient diacylglycerol (DAG) signals into prolonged physiological effects, downstream of PKC. It is involved in the regulation of the cell cycle by modulating microtubule nucleation and dynamics. PKD3 acts as a key mediator in several cancer development signaling pathways. PKD3 contains N-terminal tandem cysteine-rich zinc binding C1 (PKC conserved region 1), central PH (Pleckstrin Homology), and C-terminal catalytic kinase domains. This model corresponds to the first C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.


Pssm-ID: 410391  Cd Length: 75  Bit Score: 36.94  E-value: 2.43e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
gi 25149023 176 CEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVCAGVLSTR 219
Cdd:cd20841  24 CDYCGEMLWGLVRQGLKCEGCGLNYHKRCAFKIPNNCSGVRKRR 67
C1_SpBZZ1-like cd20824
protein kinase C conserved region 1 (C1 domain) found in Schizosaccharomyces pombe protein ...
176-214 3.03e-03

protein kinase C conserved region 1 (C1 domain) found in Schizosaccharomyces pombe protein BZZ1 and similar proteins; BZZ1 is a syndapin-like F-BAR protein that plays a role in endocytosis and trafficking to the vacuole. It functions with type I myosins to restore polarity of the actin cytoskeleton after NaCl stress. BZZ1 contains an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs), a central coiled-coil, and two C-terminal SH3 domains. Schizosaccharomyces pombe BZZ1 also harbors a C1 domain, but Saccharomyces cerevisiae BZZ1 doesn't have any. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.


Pssm-ID: 410374  Cd Length: 53  Bit Score: 35.75  E-value: 3.03e-03
                        10        20        30
                ....*....|....*....|....*....|....*....
gi 25149023 176 CEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVCAG 214
Cdd:cd20824  15 CDYCGEKIWGLSKKGLSCKDCGFNCHIKCELKVPPECPG 53
C1_betaCHN cd20857
protein kinase C conserved region 1 (C1 domain) found in beta-chimaerin and similar proteins; ...
161-212 3.85e-03

protein kinase C conserved region 1 (C1 domain) found in beta-chimaerin and similar proteins; Beta-chimaerin, also called beta-chimerin (BCH) or Rho GTPase-activating protein 3 (ARHGAP3), is a GTPase-activating protein (GAP) for p21-rac. Insufficient expression of beta-2 chimaerin is expected to lead to higher Rac activity and could therefore play a role in the progression from low-grade to high-grade tumors. Beta-chimaerin contains a functional SH2 domain that can bind to phosphotyrosine motifs within receptors, a GAP domain with specificity in vitro for Rac1 and a diacylglycerol (DAG)-binding C1 domain which allows them to translocate to membranes in response to DAG signaling and anchors them in close proximity to activated Rac. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.


Pssm-ID: 410407  Cd Length: 61  Bit Score: 35.79  E-value: 3.85e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 25149023 161 HEFVMQPVRGGHnpCCEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVC 212
Cdd:cd20857   6 HNFKVHTFRGPH--WCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDC 55
C1_cPKC_nPKC_rpt2 cd20793
second protein kinase C conserved region 1 (C1 domain) found in classical (or conventional) ...
176-212 4.01e-03

second protein kinase C conserved region 1 (C1 domain) found in classical (or conventional) protein kinase C (cPKC), novel protein kinase C (nPKC), and similar proteins; PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. nPKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs (aPKCs) only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. This family includes classical PKCs (cPKCs) and novel PKCs (nPKCs). There are four cPKC isoforms (named alpha, betaI, betaII, and gamma) and four nPKC isoforms (delta, epsilon, eta, and theta). Members of this family contain two copies of C1 domain. This model corresponds to the second one. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.


Pssm-ID: 410343  Cd Length: 50  Bit Score: 35.33  E-value: 4.01e-03
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 25149023 176 CEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVC 212
Cdd:cd20793  14 CDHCGSLLYGLVRQGLKCKDCGMNVHHRCKENVPHLC 50
C1_MTMR-like cd20828
protein kinase C conserved region 1 (C1 domain) found in uncharacterized proteins similar to ...
176-212 4.95e-03

protein kinase C conserved region 1 (C1 domain) found in uncharacterized proteins similar to myotubularin-related proteins; The family includes a group of uncharacterized proteins that show high sequence similarity to vertebrate myotubularin-related proteins (MTMRs), such as MTMR5 and MTMR13. MTMRs may function as guanine nucleotide exchange factors (GEFs). Vertebrate MTMR5 and MTMR13 contain an N-terminal DENN domain, a PH-GRAM domain, an inactive PTP domain, a SET interaction domain, a coiled-coil domain, and a C-terminal PH domain. Members of this family contain these domains and have an additional C1 domain. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.


Pssm-ID: 410378  Cd Length: 57  Bit Score: 35.50  E-value: 4.95e-03
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 25149023 176 CEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVC 212
Cdd:cd20828  19 CDYCLQILWGIVKKGMKCSECGYNCHEKCQPQVPKQC 55
C1_1 pfam00130
Phorbol esters/diacylglycerol binding domain (C1 domain); This domain is also known as the ...
176-212 9.81e-03

Phorbol esters/diacylglycerol binding domain (C1 domain); This domain is also known as the Protein kinase C conserved region 1 (C1) domain.


Pssm-ID: 395079  Cd Length: 53  Bit Score: 34.34  E-value: 9.81e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 25149023   176 CEVCMHTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVC 212
Cdd:pfam00130  14 CDHCGEFLWGLGKQGLKCSWCKLNVHKRCHEKVPPEC 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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