|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
532-791 |
2.45e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 91.92 E-value: 2.45e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 532 RLDFDDNNAFSDLHDLEVLDLSHNAhyfsiagVTHRLGFIQNLINLRVLNLSHNGIYTLTEE-SELKsiSLKELVFSGNR 610
Cdd:COG4886 100 ELDLSGNEELSNLTNLESLDLSGNQ-------LTDLPEELANLTNLKELDLSNNQLTDLPEPlGNLT--NLKSLDLSNNQ 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 611 LDRLWNAndgkywsiFKSLQNLIRLDLSYNNLQQIPNgAFLNLPqSLQELLISGNKLRFFNWTLLQyFPHLHLLDLSRNE 690
Cdd:COG4886 171 LTDLPEE--------LGNLTNLKELDLSNNQITDLPE-PLGNLT-NLEELDLSGNQLTDLPEPLAN-LTNLETLDLSNNQ 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 691 LYFLPNcLSKFaHSLETLLLSHNHFSHLPSgfLSEARNLVHLDLSFNTIKMINKSSLQTKMKTNLSILELHGNYFDCTCD 770
Cdd:COG4886 240 LTDLPE-LGNL-TNLEELDLSNNQLTDLPP--LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLI 315
|
250 260
....*....|....*....|.
gi 126723495 771 ISDFRSWLDENLNITIPKLVN 791
Cdd:COG4886 316 LLLLLTTLLLLLLLLKGLLVT 336
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
66-484 |
6.46e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 84.21 E-value: 6.46e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 66 TNIDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQHPNENKNGMNITEGALLSLRNLTVLLLEDNQLYTIPA-GLPESL 144
Cdd:COG4886 19 ELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDlGDLTNL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 145 KELSLIQNNIFqvtknntFGLRNLERLYLGWNcyfkcnqTFKVEDGAFKNLIHLKVLSLSFNNLFYVPPKLPS--SLRKL 222
Cdd:COG4886 99 TELDLSGNEEL-------SNLTNLESLDLSGN-------QLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNltNLKSL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 223 FLSNAKIMNITQEdFKGLENLTLLDLSGNcprcynapfpctpckensSIHIHPLAFQSLTQLLYLNLSSTSLRTIPSTwF 302
Cdd:COG4886 165 DLSNNQLTDLPEE-LGNLTNLKELDLSNN------------------QITDLPEPLGNLTNLEELDLSGNQLTDLPEP-L 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 303 ENLSNLKELHLEFNylvqEIASGAFLTKLPSLQILDLSFNfqykeylQFINISSNfSKLRSLKKLHLRGYVFRELKKKHF 382
Cdd:COG4886 225 ANLTNLETLDLSNN----QLTDLPELGNLTNLEELDLSNN-------QLTDLPPL-ANLTNLKTLDLSNNQLTDLKLKEL 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 383 EHLQSLPNLATINLGINFIEKIDFKAFQNFSKLDVIYLSGNRIASVLDGTDYSSWRNRLRKPLSTDDDEFDPHVNFYHST 462
Cdd:COG4886 293 ELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLL 372
|
410 420
....*....|....*....|..
gi 126723495 463 KPLIKPQCTAYGKALDLSLNNI 484
Cdd:COG4886 373 GLLEATLLTLALLLLTLLLLLL 394
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
871-1007 |
3.10e-14 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 70.82 E-value: 3.10e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 871 YDAYISYdtkdaSVTDWVINELRYHLEESEDKSVLlCLEERDWDPGLPIIDNLMQSINQSKKTIFVLTKKYAKSWNFKTA 950
Cdd:smart00255 2 YDVFISY-----SGKEDVRNEFLSHLLEKLRGYGL-CVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDE 75
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 126723495 951 FYLALQRLMDENMDVIIFILLEPVLQY--SQYLRLRqRICKSSILQWPNNPKAEnlFWQ 1007
Cdd:smart00255 76 LVAALENALEEGGLRVIPIFYEVIPSDvrKQPGKFR-KVFKKNYLKWPEDEKEQ--FWK 131
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
144-720 |
2.06e-10 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 64.87 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 144 LKELSLIQNNIFQVTKNNTFGLRNLERLYLGWNcyfkcNQTFKVEDGAFKNLIHLKVLSLSFNNLF-YVPPKLPSSLRKL 222
Cdd:PLN00113 71 VVSIDLSGKNISGKISSAIFRLPYIQTINLSNN-----QLSGPIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSIPNLETL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 223 FLSNAKIMNITQEDFKGLENLTLLDLSGNCprcynapfpctpckenSSIHIhPLAFQSLTQLLYLNLSSTSLR-TIPSTw 301
Cdd:PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNV----------------LVGKI-PNSLTNLTSLEFLTLASNQLVgQIPRE- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 302 FENLSNLKELHLEFNYLVQEIASGafLTKLPSLQILDLSFNfqykeylqfiNISSNF-SKLRSLKKLHlrgYVF---REL 377
Cdd:PLN00113 208 LGQMKSLKWIYLGYNNLSGEIPYE--IGGLTSLNHLDLVYN----------NLTGPIpSSLGNLKNLQ---YLFlyqNKL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 378 KKKHFEHLQSLPNLATINLGINFIEKIDFKAFQNFSKLDVIYLSGNRIASVLDGTDYSS--------WRNRLRKPLSTDd 449
Cdd:PLN00113 273 SGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLprlqvlqlWSNKFSGEIPKN- 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 450 deFDPHVNFyhstkplikpqctaygKALDLSLNNI----------------FIIGKSQFEGfqDI-----ACLNLS-FNA 507
Cdd:PLN00113 352 --LGKHNNL----------------TVLDLSTNNLtgeipeglcssgnlfkLILFSNSLEG--EIpkslgACRSLRrVRL 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 508 NTQVFNG---TEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHNAHYfsiAGVTHRLGfiqnLINLRVLNLSH 584
Cdd:PLN00113 412 QDNSFSGelpSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFF---GGLPDSFG----SKRLENLDLSR 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 585 NGIYTLTEESELKSISLKELVFSGNRLdrlwnanDGKYWSIFKSLQNLIRLDLSYNNLqqipNGaflNLPQSLQEllisg 664
Cdd:PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKL-------SGEIPDELSSCKKLVSLDLSHNQL----SG---QIPASFSE----- 545
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 126723495 665 nklrffnwtllqyFPHLHLLDLSRNELYF-LPNCLSKfAHSLETLLLSHNHF-SHLPS 720
Cdd:PLN00113 546 -------------MPVLSQLDLSQNQLSGeIPKNLGN-VESLVQVNISHNHLhGSLPS 589
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
267-763 |
1.01e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 62.94 E-value: 1.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 267 ENSSIHIHPLAFQsLTQLLYLNLSSTSLR-TIPSTWFENLSNLKELHLEFNYLVQEIASGAfltkLPSLQILDLSFNFQY 345
Cdd:PLN00113 79 KNISGKISSAIFR-LPYIQTINLSNNQLSgPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGS----IPNLETLDLSNNMLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 346 KEY---------LQFINISSNF---------SKLRSLKKL-----HLRGYVFRELKKkhfehlqsLPNLATINLGINFIE 402
Cdd:PLN00113 154 GEIpndigsfssLKVLDLGGNVlvgkipnslTNLTSLEFLtlasnQLVGQIPRELGQ--------MKSLKWIYLGYNNLS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 403 ---KIDFKAFQNFSKLDVIY--LSGNRIASVLDGTDYSS---WRNRLRKPLstdddefdPHVNFyhSTKPLIkpqctayg 474
Cdd:PLN00113 226 geiPYEIGGLTSLNHLDLVYnnLTGPIPSSLGNLKNLQYlflYQNKLSGPI--------PPSIF--SLQKLI-------- 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 475 kALDLSLNNIFIIGKSQFEGFQDIACLNLSFNANTQVFNGTeFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSH 554
Cdd:PLN00113 288 -SLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA-LTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLST 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 555 NahyfSIAG-VTHRLGFIQNLINLRVLNLSHNGIY--TLTEESELKSISLKELVFSGnrldrlwnandgKYWSIFKSLQN 631
Cdd:PLN00113 366 N----NLTGeIPEGLCSSGNLFKLILFSNSLEGEIpkSLGACRSLRRVRLQDNSFSG------------ELPSEFTKLPL 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 632 LIRLDLSYNNLQ--------QIP---------NGAFLNLPQS-----LQELLISGNKLRFFNWTLLQYFPHLHLLDLSRN 689
Cdd:PLN00113 430 VYFLDISNNNLQgrinsrkwDMPslqmlslarNKFFGGLPDSfgskrLENLDLSRNQFSGAVPRKLGSLSELMQLKLSEN 509
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 126723495 690 ELY-FLPNCLSKfAHSLETLLLSHNHFS-HLPSGFlSEARNLVHLDLSFNTIK---MINKSSLQTKMKTNLSILELHGN 763
Cdd:PLN00113 510 KLSgEIPDELSS-CKKLVSLDLSHNQLSgQIPASF-SEMPVLSQLDLSQNQLSgeiPKNLGNVESLVQVNISHNHLHGS 586
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
108-252 |
2.10e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 58.64 E-value: 2.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 108 NGMNITE-GALLSLRNLTVLLLEDNQLYTIPaGLP--ESLKELSLIQNNIfqvTK-NNTFGLRNLERLYLGwncyfkCNQ 183
Cdd:cd21340 10 NDKNITKiDNLSLCKNLKVLYLYDNKITKIE-NLEflTNLTHLYLQNNQI---EKiENLENLVNLKKLYLG------GNR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 184 TFKVEDgaFKNLIHLKVLSLSFNNLfyvPPKLP------------SSLRKLFLSNAKIMNItqEDFKGLENLTLLDLSGN 251
Cdd:cd21340 80 ISVVEG--LENLTNLEELHIENQRL---PPGEKltfdprslaalsNSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNN 152
|
.
gi 126723495 252 C 252
Cdd:cd21340 153 Q 153
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
874-985 |
5.27e-09 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 55.01 E-value: 5.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 874 YISYDTKDASVTDWVINELryhleesEDKSVLLCLEERDWDPGLPIIDNLMQSINQSKKTIFVLTKKYAKSWNFKTAFYL 953
Cdd:pfam13676 2 FISYAGEDRAWAEWLADAL-------EAAGYRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEA 74
|
90 100 110
....*....|....*....|....*....|....*..
gi 126723495 954 ALQRLMDENmdVIIFILLE-----PVLQYSQYLRLRQ 985
Cdd:pfam13676 75 ALADPEGRK--RLIPVRLEcdlelPGLAGLQYIDLRD 109
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
546-765 |
2.35e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 53.90 E-value: 2.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 546 DLEVLDLSHNAHYFSIAGVTHRLGFIQNLINLRVLNLSHNGIYTLTE---ESELKSISLKELVFSGNRLDrlwnanDGKY 622
Cdd:cd00116 52 SLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCgvlESLLRSSSLQELKLNNNGLG------DRGL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 623 WSIFKSLQ----NLIRLDLSYNNLQQ---IPNGAFLNLPQSLQELLISGNKLRFFNWTLL----QYFPHLHLLDLSRNEL 691
Cdd:cd00116 126 RLLAKGLKdlppALEKLVLGRNRLEGascEALAKALRANRDLKELNLANNGIGDAGIRALaeglKANCNLEVLDLNNNGL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 692 -----YFLPNCLSKFAhSLETLLLSHNHF-----SHLPSGFLSEARNLVHLDLSFNTIKMINKSSLQTKMKTNLSI--LE 759
Cdd:cd00116 206 tdegaSALAETLASLK-SLEVLNLGDNNLtdagaAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLleLD 284
|
....*.
gi 126723495 760 LHGNYF 765
Cdd:cd00116 285 LRGNKF 290
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
600-667 |
3.16e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 48.29 E-value: 3.16e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 126723495 600 SLKELVFSGNRLDRLwnandgkYWSIFKSLQNLIRLDLSYNNLQQIPNGAFLNLPqSLQELLISGNKL 667
Cdd:pfam13855 2 NLRSLDLSNNRLTSL-------DDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLP-SLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
501-555 |
3.92e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 3.92e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 126723495 501 LNLSFNaNTQVFNGTEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHN 555
Cdd:pfam13855 6 LDLSNN-RLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
282-342 |
2.16e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.98 E-value: 2.16e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 126723495 282 TQLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYLvQEIASGAFlTKLPSLQILDLSFN 342
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAF-SGLPSLRYLDLSGN 59
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
532-791 |
2.45e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 91.92 E-value: 2.45e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 532 RLDFDDNNAFSDLHDLEVLDLSHNAhyfsiagVTHRLGFIQNLINLRVLNLSHNGIYTLTEE-SELKsiSLKELVFSGNR 610
Cdd:COG4886 100 ELDLSGNEELSNLTNLESLDLSGNQ-------LTDLPEELANLTNLKELDLSNNQLTDLPEPlGNLT--NLKSLDLSNNQ 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 611 LDRLWNAndgkywsiFKSLQNLIRLDLSYNNLQQIPNgAFLNLPqSLQELLISGNKLRFFNWTLLQyFPHLHLLDLSRNE 690
Cdd:COG4886 171 LTDLPEE--------LGNLTNLKELDLSNNQITDLPE-PLGNLT-NLEELDLSGNQLTDLPEPLAN-LTNLETLDLSNNQ 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 691 LYFLPNcLSKFaHSLETLLLSHNHFSHLPSgfLSEARNLVHLDLSFNTIKMINKSSLQTKMKTNLSILELHGNYFDCTCD 770
Cdd:COG4886 240 LTDLPE-LGNL-TNLEELDLSNNQLTDLPP--LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLI 315
|
250 260
....*....|....*....|.
gi 126723495 771 ISDFRSWLDENLNITIPKLVN 791
Cdd:COG4886 316 LLLLLTTLLLLLLLLKGLLVT 336
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
66-484 |
6.46e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 84.21 E-value: 6.46e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 66 TNIDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQHPNENKNGMNITEGALLSLRNLTVLLLEDNQLYTIPA-GLPESL 144
Cdd:COG4886 19 ELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDlGDLTNL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 145 KELSLIQNNIFqvtknntFGLRNLERLYLGWNcyfkcnqTFKVEDGAFKNLIHLKVLSLSFNNLFYVPPKLPS--SLRKL 222
Cdd:COG4886 99 TELDLSGNEEL-------SNLTNLESLDLSGN-------QLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNltNLKSL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 223 FLSNAKIMNITQEdFKGLENLTLLDLSGNcprcynapfpctpckensSIHIHPLAFQSLTQLLYLNLSSTSLRTIPSTwF 302
Cdd:COG4886 165 DLSNNQLTDLPEE-LGNLTNLKELDLSNN------------------QITDLPEPLGNLTNLEELDLSGNQLTDLPEP-L 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 303 ENLSNLKELHLEFNylvqEIASGAFLTKLPSLQILDLSFNfqykeylQFINISSNfSKLRSLKKLHLRGYVFRELKKKHF 382
Cdd:COG4886 225 ANLTNLETLDLSNN----QLTDLPELGNLTNLEELDLSNN-------QLTDLPPL-ANLTNLKTLDLSNNQLTDLKLKEL 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 383 EHLQSLPNLATINLGINFIEKIDFKAFQNFSKLDVIYLSGNRIASVLDGTDYSSWRNRLRKPLSTDDDEFDPHVNFYHST 462
Cdd:COG4886 293 ELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLL 372
|
410 420
....*....|....*....|..
gi 126723495 463 KPLIKPQCTAYGKALDLSLNNI 484
Cdd:COG4886 373 GLLEATLLTLALLLLTLLLLLL 394
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
475-830 |
2.55e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 82.67 E-value: 2.55e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 475 KALDLSLNNIFIIGKSQFEGFQDIACLNLSFNantqvfngTEFSSMPHIKYLDLTNNRLDfDDNNAFSDLHDLEVLDLSH 554
Cdd:COG4886 75 LLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN--------EELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSN 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 555 NahyfsiaGVTHRLGFIQNLINLRVLNLSHNGIYTLTEE-SELKSisLKELVFSGNRLDRLWNAndgkywsiFKSLQNLI 633
Cdd:COG4886 146 N-------QLTDLPEPLGNLTNLKSLDLSNNQLTDLPEElGNLTN--LKELDLSNNQITDLPEP--------LGNLTNLE 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 634 RLDLSYNNLQQIPNgAFLNLPqSLQELLISGNKLRFFNWtlLQYFPHLHLLDLSRNELYFLPNCLSkfAHSLETLLLSHN 713
Cdd:COG4886 209 ELDLSGNQLTDLPE-PLANLT-NLETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQLTDLPPLAN--LTNLKTLDLSNN 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 714 HFSHLPSGFLSEARNLVHLDLSFNTIKMINKSSLQTKMKTNLSILELHGNYFDCTCDISDFRSWLDENLNITIPKLVNVI 793
Cdd:COG4886 283 QLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLL 362
|
330 340 350
....*....|....*....|....*....|....*..
gi 126723495 794 CSNPGDQKSKSIMSLDLTTCVSDTTAAVLFFLTFLTT 830
Cdd:COG4886 363 LTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAG 399
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
104-555 |
5.34e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 78.44 E-value: 5.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 104 NENKNGMNITEGALLSLRNLTVLLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTFGLRNLERLYLGWNCYFKCN- 182
Cdd:COG4886 2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 183 -QTFKVEDGAFKNLIHLKVLSLSFNNLFYVPpklpSSLRKLFLSNAKIMNITqEDFKGLENLTLLDLSGNcprcynapfp 261
Cdd:COG4886 82 lSLLLLGLTDLGDLTNLTELDLSGNEELSNL----TNLESLDLSGNQLTDLP-EELANLTNLKELDLSNN---------- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 262 ctpckensSIHIHPLAFQSLTQLLYLNLSSTSLRTIPStWFENLSNLKELHLEFNYLvQEIasGAFLTKLPSLQILDLSF 341
Cdd:COG4886 147 --------QLTDLPEPLGNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQI-TDL--PEPLGNLTNLEELDLSG 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 342 NfqykeylQFINISSNFSKLRSLKKLHLRGYVFRELkkkhfEHLQSLPNLATINLGINFIEKIDFKAfqNFSKLDVIYLS 421
Cdd:COG4886 215 N-------QLTDLPEPLANLTNLETLDLSNNQLTDL-----PELGNLTNLEELDLSNNQLTDLPPLA--NLTNLKTLDLS 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 422 GNRIASVLDGTDYSSWRNRLRKPLSTDDDEFDPHVNFYHSTKPLIKpqctayGKALDLSLNNIFIIGKSQFEGFQDIACL 501
Cdd:COG4886 281 NNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLL------LLLLKGLLVTLTTLALSLSLLALLTLLL 354
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 126723495 502 NLSFNANTQVFNGTEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHN 555
Cdd:COG4886 355 LLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALL 408
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
58-418 |
2.30e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.51 E-value: 2.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 58 PQTIGKYVTNIDLSDNAITHITKESFQKLQNLTKIDLNHNAkqqhpnenkngmnitegALLSLRNLTVLLLEDNQLYTIP 137
Cdd:COG4886 67 LLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-----------------ELSNLTNLESLDLSGNQLTDLP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 138 AGLPEslkelsliqnnifqvtknntfgLRNLERLYLGWNcyfkcnqTFKVEDGAFKNLIHLKVLSLSFNNLFYVPPKLP- 216
Cdd:COG4886 130 EELAN----------------------LTNLKELDLSNN-------QLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGn 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 217 -SSLRKLFLSNAKIMNITQEdFKGLENLTLLDLSGNcprcynapfpctpckENSSIhihPLAFQSLTQLLYLNLSSTSLR 295
Cdd:COG4886 181 lTNLKELDLSNNQITDLPEP-LGNLTNLEELDLSGN---------------QLTDL---PEPLANLTNLETLDLSNNQLT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 296 TIPstWFENLSNLKELHLEFNylvqEIASGAFLTKLPSLQILDLSFNFQYKEYLQFINISSNFSKLRSLKKLHLRGYVFR 375
Cdd:COG4886 242 DLP--ELGNLTNLEELDLSNN----QLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLI 315
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 126723495 376 ELKKKHFEHLQSLPNLATINLGINFIEKIDFKAFQNFSKLDVI 418
Cdd:COG4886 316 LLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNL 358
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
871-1007 |
3.10e-14 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 70.82 E-value: 3.10e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 871 YDAYISYdtkdaSVTDWVINELRYHLEESEDKSVLlCLEERDWDPGLPIIDNLMQSINQSKKTIFVLTKKYAKSWNFKTA 950
Cdd:smart00255 2 YDVFISY-----SGKEDVRNEFLSHLLEKLRGYGL-CVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDE 75
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 126723495 951 FYLALQRLMDENMDVIIFILLEPVLQY--SQYLRLRqRICKSSILQWPNNPKAEnlFWQ 1007
Cdd:smart00255 76 LVAALENALEEGGLRVIPIFYEVIPSDvrKQPGKFR-KVFKKNYLKWPEDEKEQ--FWK 131
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
481-852 |
3.79e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 75.74 E-value: 3.79e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 481 LNNIFIIGKSQFEGFQDIACLNLSFNANTQVFNGTEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHNAHYFS 560
Cdd:COG4886 2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 561 IAGVTHRLGFIQNLINLRVLNLSHN-GIYTLTEESEL---------------KSISLKELVFSGNRLDRLWNAndgkyws 624
Cdd:COG4886 82 LSLLLLGLTDLGDLTNLTELDLSGNeELSNLTNLESLdlsgnqltdlpeelaNLTNLKELDLSNNQLTDLPEP------- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 625 iFKSLQNLIRLDLSYNNLQQIPNgAFLNLPQsLQELLISGNKLRFFNWTLLQyFPHLHLLDLSRNELYFLPNCLSKFaHS 704
Cdd:COG4886 155 -LGNLTNLKSLDLSNNQLTDLPE-ELGNLTN-LKELDLSNNQITDLPEPLGN-LTNLEELDLSGNQLTDLPEPLANL-TN 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 705 LETLLLSHNHFSHLPSgfLSEARNLVHLDLSFNTIKMINKSSLqtkmKTNLSILELHGNYFDCTCDISDFRSWLDENLNI 784
Cdd:COG4886 230 LETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQLTDLPPLAN----LTNLKTLDLSNNQLTDLKLKELELLLGLNSLLL 303
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 126723495 785 TIPKLVNVICSNPGDQKSKSIMSLDLTTCVSDTTAAVLFFLTFLTTSMVMLAALVHHLFYWDVWFIYH 852
Cdd:COG4886 304 LLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGL 371
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
144-720 |
2.06e-10 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 64.87 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 144 LKELSLIQNNIFQVTKNNTFGLRNLERLYLGWNcyfkcNQTFKVEDGAFKNLIHLKVLSLSFNNLF-YVPPKLPSSLRKL 222
Cdd:PLN00113 71 VVSIDLSGKNISGKISSAIFRLPYIQTINLSNN-----QLSGPIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSIPNLETL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 223 FLSNAKIMNITQEDFKGLENLTLLDLSGNCprcynapfpctpckenSSIHIhPLAFQSLTQLLYLNLSSTSLR-TIPSTw 301
Cdd:PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNV----------------LVGKI-PNSLTNLTSLEFLTLASNQLVgQIPRE- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 302 FENLSNLKELHLEFNYLVQEIASGafLTKLPSLQILDLSFNfqykeylqfiNISSNF-SKLRSLKKLHlrgYVF---REL 377
Cdd:PLN00113 208 LGQMKSLKWIYLGYNNLSGEIPYE--IGGLTSLNHLDLVYN----------NLTGPIpSSLGNLKNLQ---YLFlyqNKL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 378 KKKHFEHLQSLPNLATINLGINFIEKIDFKAFQNFSKLDVIYLSGNRIASVLDGTDYSS--------WRNRLRKPLSTDd 449
Cdd:PLN00113 273 SGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLprlqvlqlWSNKFSGEIPKN- 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 450 deFDPHVNFyhstkplikpqctaygKALDLSLNNI----------------FIIGKSQFEGfqDI-----ACLNLS-FNA 507
Cdd:PLN00113 352 --LGKHNNL----------------TVLDLSTNNLtgeipeglcssgnlfkLILFSNSLEG--EIpkslgACRSLRrVRL 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 508 NTQVFNG---TEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHNAHYfsiAGVTHRLGfiqnLINLRVLNLSH 584
Cdd:PLN00113 412 QDNSFSGelpSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFF---GGLPDSFG----SKRLENLDLSR 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 585 NGIYTLTEESELKSISLKELVFSGNRLdrlwnanDGKYWSIFKSLQNLIRLDLSYNNLqqipNGaflNLPQSLQEllisg 664
Cdd:PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKL-------SGEIPDELSSCKKLVSLDLSHNQL----SG---QIPASFSE----- 545
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 126723495 665 nklrffnwtllqyFPHLHLLDLSRNELYF-LPNCLSKfAHSLETLLLSHNHF-SHLPS 720
Cdd:PLN00113 546 -------------MPVLSQLDLSQNQLSGeIPKNLGN-VESLVQVNISHNHLhGSLPS 589
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
267-763 |
1.01e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 62.94 E-value: 1.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 267 ENSSIHIHPLAFQsLTQLLYLNLSSTSLR-TIPSTWFENLSNLKELHLEFNYLVQEIASGAfltkLPSLQILDLSFNFQY 345
Cdd:PLN00113 79 KNISGKISSAIFR-LPYIQTINLSNNQLSgPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGS----IPNLETLDLSNNMLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 346 KEY---------LQFINISSNF---------SKLRSLKKL-----HLRGYVFRELKKkhfehlqsLPNLATINLGINFIE 402
Cdd:PLN00113 154 GEIpndigsfssLKVLDLGGNVlvgkipnslTNLTSLEFLtlasnQLVGQIPRELGQ--------MKSLKWIYLGYNNLS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 403 ---KIDFKAFQNFSKLDVIY--LSGNRIASVLDGTDYSS---WRNRLRKPLstdddefdPHVNFyhSTKPLIkpqctayg 474
Cdd:PLN00113 226 geiPYEIGGLTSLNHLDLVYnnLTGPIPSSLGNLKNLQYlflYQNKLSGPI--------PPSIF--SLQKLI-------- 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 475 kALDLSLNNIFIIGKSQFEGFQDIACLNLSFNANTQVFNGTeFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSH 554
Cdd:PLN00113 288 -SLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA-LTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLST 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 555 NahyfSIAG-VTHRLGFIQNLINLRVLNLSHNGIY--TLTEESELKSISLKELVFSGnrldrlwnandgKYWSIFKSLQN 631
Cdd:PLN00113 366 N----NLTGeIPEGLCSSGNLFKLILFSNSLEGEIpkSLGACRSLRRVRLQDNSFSG------------ELPSEFTKLPL 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 632 LIRLDLSYNNLQ--------QIP---------NGAFLNLPQS-----LQELLISGNKLRFFNWTLLQYFPHLHLLDLSRN 689
Cdd:PLN00113 430 VYFLDISNNNLQgrinsrkwDMPslqmlslarNKFFGGLPDSfgskrLENLDLSRNQFSGAVPRKLGSLSELMQLKLSEN 509
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 126723495 690 ELY-FLPNCLSKfAHSLETLLLSHNHFS-HLPSGFlSEARNLVHLDLSFNTIK---MINKSSLQTKMKTNLSILELHGN 763
Cdd:PLN00113 510 KLSgEIPDELSS-CKKLVSLDLSHNQLSgQIPASF-SEMPVLSQLDLSQNQLSgeiPKNLGNVESLVQVNISHNHLHGS 586
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
108-252 |
2.10e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 58.64 E-value: 2.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 108 NGMNITE-GALLSLRNLTVLLLEDNQLYTIPaGLP--ESLKELSLIQNNIfqvTK-NNTFGLRNLERLYLGwncyfkCNQ 183
Cdd:cd21340 10 NDKNITKiDNLSLCKNLKVLYLYDNKITKIE-NLEflTNLTHLYLQNNQI---EKiENLENLVNLKKLYLG------GNR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 184 TFKVEDgaFKNLIHLKVLSLSFNNLfyvPPKLP------------SSLRKLFLSNAKIMNItqEDFKGLENLTLLDLSGN 251
Cdd:cd21340 80 ISVVEG--LENLTNLEELHIENQRL---PPGEKltfdprslaalsNSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNN 152
|
.
gi 126723495 252 C 252
Cdd:cd21340 153 Q 153
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
273-718 |
3.39e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 60.33 E-value: 3.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 273 IHPLAFQSLTQLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYLVQEIASGAFLTKLPSLQILDLSFNfqykeylqfi 352
Cdd:COG4886 37 LLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN---------- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 353 nisSNFSKLRSLKKLHLRGYVFRELkkkhFEHLQSLPNLATINLGINFIEKIDfKAFQNFSKLDVIYLSGNRIASVldgt 432
Cdd:COG4886 107 ---EELSNLTNLESLDLSGNQLTDL----PEELANLTNLKELDLSNNQLTDLP-EPLGNLTNLKSLDLSNNQLTDL---- 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 433 dysswrnrlrkplstdDDEFDPHVNFyhstkplikpqctaygKALDLSLNNIfiigksqfegfQDIaclnlsfnantqvf 512
Cdd:COG4886 175 ----------------PEELGNLTNL----------------KELDLSNNQI-----------TDL-------------- 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 513 nGTEFSSMPHIKYLDLTNNRLDfDDNNAFSDLHDLEVLDLSHNAhyfsiagVTHrLGFIQNLINLRVLNLSHNGIYTLTE 592
Cdd:COG4886 198 -PEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQ-------LTD-LPELGNLTNLEELDLSNNQLTDLPP 267
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 593 ESELKsiSLKELVFSGNRLDRLWNANDGKYWSIFKSLQNLIRLDLSYNNLQQIPNGAFLNLPQSLQELLISGNKLRFFNW 672
Cdd:COG4886 268 LANLT--NLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLS 345
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 126723495 673 TLLQYFPHLHLLDLSRNELYFLPNCLSKFAHSLETLLLSHNHFSHL 718
Cdd:COG4886 346 LLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLL 391
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
50-234 |
3.91e-09 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 60.87 E-value: 3.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 50 NHRQLHEVPQTIGKYVTNIDLSDNAITHITKESFQKLQNLtkiDLNHNAKQQHPNenkngmNITEGallsLRNLTVLlle 129
Cdd:PRK15370 228 NSNQLTSIPATLPDTIQEMELSINRITELPERLPSALQSL---DLFHNKISCLPE------NLPEE----LRYLSVY--- 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 130 DNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTFGLRNLErlylgwncyfkcnqtfkVEDGAFKNL-----IHLKVLSLS 204
Cdd:PRK15370 292 DNSIRTLPAHLPSGITHLNVQSNSLTALPETLPPGLKTLE-----------------AGENALTSLpaslpPELQVLDVS 354
|
170 180 190
....*....|....*....|....*....|
gi 126723495 205 FNNLFYVPPKLPSSLRKLFLSNAKIMNITQ 234
Cdd:PRK15370 355 KNQITVLPETLPPTITTLDVSRNALTNLPE 384
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
874-985 |
5.27e-09 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 55.01 E-value: 5.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 874 YISYDTKDASVTDWVINELryhleesEDKSVLLCLEERDWDPGLPIIDNLMQSINQSKKTIFVLTKKYAKSWNFKTAFYL 953
Cdd:pfam13676 2 FISYAGEDRAWAEWLADAL-------EAAGYRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEA 74
|
90 100 110
....*....|....*....|....*....|....*..
gi 126723495 954 ALQRLMDENmdVIIFILLE-----PVLQYSQYLRLRQ 985
Cdd:pfam13676 75 ALADPEGRK--RLIPVRLEcdlelPGLAGLQYIDLRD 109
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
871-989 |
5.28e-09 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 56.22 E-value: 5.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 871 YDAYISYDTKDasVTDWVINELRYHLEEsedKSVLLCLEERDWDPGLPIIDNLMQSINQSKKTIFVLTKKYAKS-WN--- 946
Cdd:pfam01582 1 YDVFLSFRGSD--TREWFVSHLLKELKQ---KGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSgWClde 75
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 126723495 947 FKTAFYLALQRLMdenmdVIIFILLEPVLQYSQ-----YLRLRQRICK 989
Cdd:pfam01582 76 LVKILECALDLGQ-----KVIPIFYEVDPSDVRkqtgsFGKAFKKHKK 118
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
49-359 |
8.35e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 55.71 E-value: 8.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 49 CNHRQLHEVPQTIGKYV--TNIDLSDNAITHITkESFQKLQNLTKIDLNHNakqqhpnenkngmNITE--GALLSLRNLT 124
Cdd:COG4886 143 LSNNQLTDLPEPLGNLTnlKSLDLSNNQLTDLP-EELGNLTNLKELDLSNN-------------QITDlpEPLGNLTNLE 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 125 VLLLEDNQLYTIPAGLPeslkelsliqnnifqvtknntfGLRNLERLYLGWNcyfkcnqtfKVED-GAFKNLIHLKVLSL 203
Cdd:COG4886 209 ELDLSGNQLTDLPEPLA----------------------NLTNLETLDLSNN---------QLTDlPELGNLTNLEELDL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 204 SFNNLFYVPPKLP-SSLRKLFLSNAKIMNITQEDFKGLENLTLLDLSGNcpRCYNAPFPCTPCKENSSIHIHPLAFQSLT 282
Cdd:COG4886 258 SNNQLTDLPPLANlTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLL--LLNLLELLILLLLLTTLLLLLLLLKGLLV 335
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 126723495 283 QLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYLVQEIASGAFLTKLPSLQILDLSFNFQYKEYLQFINISSNFS 359
Cdd:COG4886 336 TLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVN 412
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
32-252 |
2.21e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 53.90 E-value: 2.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 32 RSYPCDEIRHNSLVIAECNHRQLHEVPQTIGKYV--TNIDLSDNAITHITKESFQKLQ---NLTKIDLNHNAkqqhpnEN 106
Cdd:cd00116 48 RPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCglQELDLSDNALGPDGCGVLESLLrssSLQELKLNNNG------LG 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 107 KNGMNITEGALLSLR-NLTVLLLEDNQLY---TIPAG--LPE--SLKELSLIQNNIfqvtknNTFGLR----------NL 168
Cdd:cd00116 122 DRGLRLLAKGLKDLPpALEKLVLGRNRLEgasCEALAkaLRAnrDLKELNLANNGI------GDAGIRalaeglkancNL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 169 ERLYLgWNCYFKCNQTFKVEdGAFKNLIHLKVLSLSFNNLFYVP--------PKLPSSLRKLFLSNAKimnITQEDFKGL 240
Cdd:cd00116 196 EVLDL-NNNGLTDEGASALA-ETLASLKSLEVLNLGDNNLTDAGaaalasalLSPNISLLTLSLSCND---ITDDGAKDL 270
|
250
....*....|....*....
gi 126723495 241 -------ENLTLLDLSGNC 252
Cdd:cd00116 271 aevlaekESLLELDLRGNK 289
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
546-765 |
2.35e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 53.90 E-value: 2.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 546 DLEVLDLSHNAHYFSIAGVTHRLGFIQNLINLRVLNLSHNGIYTLTE---ESELKSISLKELVFSGNRLDrlwnanDGKY 622
Cdd:cd00116 52 SLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCgvlESLLRSSSLQELKLNNNGLG------DRGL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 623 WSIFKSLQ----NLIRLDLSYNNLQQ---IPNGAFLNLPQSLQELLISGNKLRFFNWTLL----QYFPHLHLLDLSRNEL 691
Cdd:cd00116 126 RLLAKGLKdlppALEKLVLGRNRLEGascEALAKALRANRDLKELNLANNGIGDAGIRALaeglKANCNLEVLDLNNNGL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 692 -----YFLPNCLSKFAhSLETLLLSHNHF-----SHLPSGFLSEARNLVHLDLSFNTIKMINKSSLQTKMKTNLSI--LE 759
Cdd:cd00116 206 tdegaSALAETLASLK-SLEVLNLGDNNLtdagaAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLleLD 284
|
....*.
gi 126723495 760 LHGNYF 765
Cdd:cd00116 285 LRGNKF 290
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
600-667 |
3.16e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 48.29 E-value: 3.16e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 126723495 600 SLKELVFSGNRLDRLwnandgkYWSIFKSLQNLIRLDLSYNNLQQIPNGAFLNLPqSLQELLISGNKL 667
Cdd:pfam13855 2 NLRSLDLSNNRLTSL-------DDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLP-SLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
68-585 |
3.41e-07 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 54.47 E-value: 3.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 68 IDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQHpnenkngmniTEGALLSLRNLTVLLLEDNQLYtipAGLPESLKEL 147
Cdd:PLN00113 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGK----------IPNSLTNLTSLEFLTLASNQLV---GQIPRELGQM 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 148 sliqnnifqvtknntfglRNLERLYLGWNcyfKCNQTFKVEDGAFKNLIHLkvlSLSFNNLF-YVPPKLP--SSLRKLFL 224
Cdd:PLN00113 212 ------------------KSLKWIYLGYN---NLSGEIPYEIGGLTSLNHL---DLVYNNLTgPIPSSLGnlKNLQYLFL 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 225 SNAKIMNITQEDFKGLENLTLLDLSGNcprcynapfpctpckeNSSIHIHPLAFQsLTQLLYLNLSSTSLR-TIPSTwFE 303
Cdd:PLN00113 268 YQNKLSGPIPPSIFSLQKLISLDLSDN----------------SLSGEIPELVIQ-LQNLEILHLFSNNFTgKIPVA-LT 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 304 NLSNLKELHLEFNYLVQEIAsgAFLTKLPSLQILDLSFNFQYKEYLQFINISSNFSKLrSLKKLHLRGyvfrELKKKhfe 383
Cdd:PLN00113 330 SLPRLQVLQLWSNKFSGEIP--KNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKL-ILFSNSLEG----EIPKS--- 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 384 hLQSLPNLATINLGINfieKIDFKAFQNFSKLDVIY---LSGNRIASVLDGtdySSWRNRLRKPLSTDDDEFDPHVNFYH 460
Cdd:PLN00113 400 -LGACRSLRRVRLQDN---SFSGELPSEFTKLPLVYfldISNNNLQGRINS---RKWDMPSLQMLSLARNKFFGGLPDSF 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 461 STKPLikpqctaygKALDLSLNNIFIIGKSQFEGFQDIACLNLSFNANTQVFNgTEFSSMPHIKYLDLTNNRLDFDDNNA 540
Cdd:PLN00113 473 GSKRL---------ENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIP-DELSSCKKLVSLDLSHNQLSGQIPAS 542
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 126723495 541 FSDLHDLEVLDLSHNahyfSIAG-VTHRLGFIQNLINlrvLNLSHN 585
Cdd:PLN00113 543 FSEMPVLSQLDLSQN----QLSGeIPKNLGNVESLVQ---VNISHN 581
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
121-342 |
3.58e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 54.32 E-value: 3.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 121 RNLTVLLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNntfgLR-NLERLYLGWNCYFKCNQTFKVEdgafknlihLK 199
Cdd:PRK15370 178 NNKTELRLKILGLTTIPACIPEQITTLILDNNELKSLPEN----LQgNIKTLYANSNQLTSIPATLPDT---------IQ 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 200 VLSLSFNNLFYVPPKLPSSLRKLFLSNAKIMNITQEDFKGLENLTLLDlsgNCPRCYNAPFPctpckenSSIhihplafq 279
Cdd:PRK15370 245 EMELSINRITELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYD---NSIRTLPAHLP-------SGI-------- 306
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 126723495 280 sltqlLYLNLSSTSLRTIPSTWFENLSNLkelhlefnylvqeIASGAFLTKL-----PSLQILDLSFN 342
Cdd:PRK15370 307 -----THLNVQSNSLTALPETLPPGLKTL-------------EAGENALTSLpaslpPELQVLDVSKN 356
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
501-555 |
3.92e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 3.92e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 126723495 501 LNLSFNaNTQVFNGTEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHN 555
Cdd:pfam13855 6 LDLSNN-RLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
42-217 |
4.47e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 53.93 E-value: 4.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 42 NSLVIAECNHRQLHEVPQTIGKYVTNIDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQHPNENKNGMNITEGALLSL- 120
Cdd:PRK15370 241 DTIQEMELSINRITELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTALp 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 121 ----RNLTVLLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTFGLrnlerlylgwncyfkcnQTFKVEDGAFKNLI 196
Cdd:PRK15370 321 etlpPGLKTLEAGENALTSLPASLPPELQVLDVSKNQITVLPETLPPTI-----------------TTLDVSRNALTNLP 383
|
170 180
....*....|....*....|....*.
gi 126723495 197 H-----LKVLSLSFNNLFYVPPKLPS 217
Cdd:PRK15370 384 EnlpaaLQIMQASRNNLVRLPESLPH 409
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
630-691 |
5.74e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.52 E-value: 5.74e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 126723495 630 QNLIRLDLSYNNLQQIPNGAFLNLPqSLQELLISGNKLRFFNWTLLQYFPHLHLLDLSRNEL 691
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLS-NLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
122-320 |
8.62e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 53.16 E-value: 8.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 122 NLTVLLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTFGLRNLErlylgwncyFKCNQTFKVEDgafkNLIH-LKV 200
Cdd:PRK15370 221 NIKTLYANSNQLTSIPATLPDTIQEMELSINRITELPERLPSALQSLD---------LFHNKISCLPE----NLPEeLRY 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 201 LSLSFNNLFYVPPKLPSSLRKLFLSNAKIMNITQEDFKGLENLTLLDlsgNCPRCYNAPFPctPCKENSS-----IHIHP 275
Cdd:PRK15370 288 LSVYDNSIRTLPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGE---NALTSLPASLP--PELQVLDvsknqITVLP 362
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 126723495 276 LAFQSLTQLLYlnLSSTSLRTIPstwfENL-SNLKELHLEFNYLVQ 320
Cdd:PRK15370 363 ETLPPTITTLD--VSRNALTNLP----ENLpAALQIMQASRNNLVR 402
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
282-342 |
2.16e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.98 E-value: 2.16e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 126723495 282 TQLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYLvQEIASGAFlTKLPSLQILDLSFN 342
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAF-SGLPSLRYLDLSGN 59
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
571-763 |
2.46e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 49.78 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 571 IQNLI---NLRVLNLSHNGIYTLTEESELKSisLKELVFSGNRLDRLWNandgkywsiFKSLQNLIRLDLSYNNLQQIPN 647
Cdd:cd21340 17 IDNLSlckNLKVLYLYDNKITKIENLEFLTN--LTHLYLQNNQIEKIEN---------LENLVNLKKLYLGGNRISVVEG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 648 gafLNLPQSLQELLISGNKLRffnwtllqyfphlhlldlSRNELYFLPNCLSKFAHSLETLLLSHNHFSHLpsGFLSEAR 727
Cdd:cd21340 86 ---LENLTNLEELHIENQRLP------------------PGEKLTFDPRSLAALSNSLRVLNISGNNIDSL--EPLAPLR 142
|
170 180 190
....*....|....*....|....*....|....*.
gi 126723495 728 NLVHLDLSFNTIKMINKSSLQTKMKTNLSILELHGN 763
Cdd:cd21340 143 NLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
65-133 |
4.82e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.82 E-value: 4.82e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 126723495 65 VTNIDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQhpnenkngmnITEGALLSLRNLTVLLLEDNQL 133
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT----------LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
272-318 |
5.07e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.82 E-value: 5.07e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 126723495 272 HIHPLAFQSLTQLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYL 318
Cdd:pfam13855 15 SLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
521-587 |
5.43e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.82 E-value: 5.43e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 126723495 521 PHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHNahyfSIAGVthRLGFIQNLINLRVLNLSHNGI 587
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNN----LLTTL--SPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
218-371 |
1.65e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 47.09 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 218 SLRKLFLSNAKIMNItqEDFKGLENLTLLDLSGNCPRCYnapfpctpckENssihihplaFQSLTQLLYLNLSSTSLRTI 297
Cdd:cd21340 25 NLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQIEKI----------EN---------LENLVNLKKLYLGGNRISVV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 298 PStwFENLSNLKELHLEFnylvQEIASGAFLTKLP--------SLQILDLSFN-------FQYKEYLQFINISSN----- 357
Cdd:cd21340 84 EG--LENLTNLEELHIEN----QRLPPGEKLTFDPrslaalsnSLRVLNISGNnidslepLAPLRNLEQLDASNNqisdl 157
|
170 180
....*....|....*....|
gi 126723495 358 ------FSKLRSLKKLHLRG 371
Cdd:cd21340 158 eelldlLSSWPSLRELDLTG 177
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
630-767 |
2.16e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 48.54 E-value: 2.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 630 QNLIRLDLSYNNLQQIPNgaflNLPQSLQELLISGNKLRFFNWTLlqyfPH-LHLLDLSRNELYFLPNCLSKfahSLETL 708
Cdd:PRK15370 199 EQITTLILDNNELKSLPE----NLQGNIKTLYANSNQLTSIPATL----PDtIQEMELSINRITELPERLPS---ALQSL 267
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 126723495 709 LLSHNHFSHLPSGFLSEARNL-----------VHLDLSFNTIKMINKS--SLQTKMKTNLSILELHGNYFDC 767
Cdd:PRK15370 268 DLFHNKISCLPENLPEELRYLsvydnsirtlpAHLPSGITHLNVQSNSltALPETLPPGLKTLEAGENALTS 339
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
166-251 |
7.47e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.36 E-value: 7.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 166 RNLERLYLGwncyfkCNQTFKVEDGAFKNLIHLKVLSLSFNNLFYVPPklpsslrklflsnakimnitqEDFKGLENLTL 245
Cdd:pfam13855 1 PNLRSLDLS------NNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSP---------------------GAFSGLPSLRY 53
|
....*.
gi 126723495 246 LDLSGN 251
Cdd:pfam13855 54 LDLSGN 59
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
517-665 |
7.96e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 45.16 E-value: 7.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 517 FSSMPHIKYLDLTNNRLDFDDNnaFSDLHDLEVLDLSHNahyfSIAgvthRLGFIQNLINLRVLNLSHNgiyTLTEESEL 596
Cdd:cd21340 42 LEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGN----RIS----VVEGLENLTNLEELHIENQ---RLPPGEKL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 597 -------KSI--SLKELVFSGNRLDRLwnandgkywSIFKSLQNLIRLDLSYNNLQQIPN--GAFLNLPQsLQELLISGN 665
Cdd:cd21340 109 tfdprslAALsnSLRVLNISGNNIDSL---------EPLAPLRNLEQLDASNNQISDLEEllDLLSSWPS-LRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
217-294 |
9.83e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.97 E-value: 9.83e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 126723495 217 SSLRKLFLSNAKIMNITQEDFKGLENLTLLDLSGNCPRcynapfpctpckenssiHIHPLAFQSLTQLLYLNLSSTSL 294
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT-----------------TLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
348-531 |
1.97e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 44.01 E-value: 1.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 348 YLQFINISS--NFSKLRSLKKLHLRGYVFRELkkkhfEHLQSLPNLATINLGINFIEKIDFkaFQNFSKLDVIYLSGNRI 425
Cdd:cd21340 8 YLNDKNITKidNLSLCKNLKVLYLYDNKITKI-----ENLEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGNRI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 426 aSVLDGTDYSSW-------RNRLRKPLSTdddEFDPHVNFYHSTKPLIkpqctaygkaLDLSLNNIFIIgkSQFEGFQDI 498
Cdd:cd21340 81 -SVVEGLENLTNleelhieNQRLPPGEKL---TFDPRSLAALSNSLRV----------LNISGNNIDSL--EPLAPLRNL 144
|
170 180 190
....*....|....*....|....*....|....*..
gi 126723495 499 ACLNLSFNantQVFNGTE----FSSMPHIKYLDLTNN 531
Cdd:cd21340 145 EQLDASNN---QISDLEElldlLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
362-425 |
2.73e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.82 E-value: 2.73e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 126723495 362 RSLKKLHLRGYVFRELKKKHFEHLqslPNLATINLGINFIEKIDFKAFQNFSKLDVIYLSGNRI 425
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGL---SNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
574-761 |
5.56e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 43.63 E-value: 5.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 574 LINLRVLNLSHNGIYTLTEESElKSISLKELVFSGNRLDrlwnaNDGKYwSIFKSLQNLIR---LDLSYNnlqQIPNGAF 650
Cdd:COG5238 184 TVYLGCNQIGDEGIEELAEALT-QNTTVTTLWLKRNPIG-----DEGAE-ILAEALKGNKSlttLDLSNN---QIGDEGV 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 651 LNLPQSLQE------LLISGNKL-----RFFNwTLLQYFPHLHLLDLSRNELYF-----LPNCLSKfAHSLETLLLSHNH 714
Cdd:COG5238 254 IALAEALKNnttvetLYLSGNQIgaegaIALA-KALQGNTTLTSLDLSVNRIGDegaiaLAEGLQG-NKTLHTLNLAYNG 331
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 126723495 715 FSHLPSGFLSEA----RNLVHLDLSFNTIKMINKSSLQTKMKTNLSILELH 761
Cdd:COG5238 332 IGAQGAIALAKAlqenTTLHSLDLSDNQIGDEGAIALAKYLEGNTTLRELN 382
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
477-533 |
1.08e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.27 E-value: 1.08e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 126723495 477 LDLSLNNIFIIGKSQFEGFQDIACLNLSFNaNTQVFNGTEFSSMPHIKYLDLTNNRL 533
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNN-LLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
306-371 |
1.53e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.89 E-value: 1.53e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 126723495 306 SNLKELHLEFNYLvQEIASGAFlTKLPSLQILDLSFNfqykeYLQFINISSnFSKLRSLKKLHLRG 371
Cdd:pfam13855 1 PNLRSLDLSNNRL-TSLDDGAF-KGLSNLKVLDLSNN-----LLTTLSPGA-FSGLPSLRYLDLSG 58
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
679-737 |
1.65e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.50 E-value: 1.65e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 126723495 679 PHLHLLDLSRNELYFLPNCLSKFAHSLETLLLSHNHFSHLPSGFLSEARNLVHLDLSFN 737
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
66-206 |
2.84e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 40.54 E-value: 2.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 66 TNIDLSDNAITHItkESFQKLQNLTKIDLNHNakqqhpnenkngmNIT--EGaLLSLRNLTVLLLEDNQL---------- 133
Cdd:cd21340 49 THLYLQNNQIEKI--ENLENLVNLKKLYLGGN-------------RISvvEG-LENLTNLEELHIENQRLppgekltfdp 112
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 126723495 134 YTIpAGLPESLKELSLIQNNIfqVTKNNTFGLRNLERLYLGWNCYfkcnQTFKVEDGAFKNLIHLKVLSLSFN 206
Cdd:cd21340 113 RSL-AALSNSLRVLNISGNNI--DSLEPLAPLRNLEQLDASNNQI----SDLEELLDLLSSWPSLRELDLTGN 178
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
518-667 |
5.46e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 40.03 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 518 SSMPHIKYLDLTNNRLD----FDDNNAFSDLHDLEVLDLSHNAhyFSIAGVTHRLGFIQNLINLRVLNLSHNGIytlTEE 593
Cdd:cd00116 134 DLPPALEKLVLGRNRLEgascEALAKALRANRDLKELNLANNG--IGDAGIRALAEGLKANCNLEVLDLNNNGL---TDE 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 594 -----SE-LKS-ISLKELVFSGNRLDrlwNANDGKYWSIFKSL-QNLIRLDLSYNNLQQIPNGAFLN-LPQ--SLQELLI 662
Cdd:cd00116 209 gasalAEtLASlKSLEVLNLGDNNLT---DAGAAALASALLSPnISLLTLSLSCNDITDDGAKDLAEvLAEkeSLLELDL 285
|
....*
gi 126723495 663 SGNKL 667
Cdd:cd00116 286 RGNKF 290
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
704-765 |
6.25e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.96 E-value: 6.25e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 126723495 704 SLETLLLSHNHFSHLPSGFLSEARNLVHLDLSFNTIKMINKSSLQtKMKtNLSILELHGNYF 765
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFS-GLP-SLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
277-428 |
8.76e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 39.65 E-value: 8.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 277 AFQSLTQLLYLNLSSTSLRTIPSTWFENL---SNLKELHLEFNYLvqEIASGAFLTK-----LPSLQILDLSFNFQYKEY 348
Cdd:cd00116 76 GLTKGCGLQELDLSDNALGPDGCGVLESLlrsSSLQELKLNNNGL--GDRGLRLLAKglkdlPPALEKLVLGRNRLEGAS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126723495 349 LqfINISSNFSKLRSLKKLHL-----RGYVFRELkkkhFEHLQSLPNLATINLGINFIEKIDFKA----FQNFSKLDVIY 419
Cdd:cd00116 154 C--EALAKALRANRDLKELNLanngiGDAGIRAL----AEGLKANCNLEVLDLNNNGLTDEGASAlaetLASLKSLEVLN 227
|
....*....
gi 126723495 420 LSGNRIASV 428
Cdd:cd00116 228 LGDNNLTDA 236
|
|
| |
