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Conserved domains on  [gi|19115533|ref|NP_594621|]
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uncharacterized protein SPOM_SPAC637.03 [Schizosaccharomyces pombe]

Protein Classification

DUF1774 domain-containing protein( domain architecture ID 10554345)

DUF1774 domain-containing protein similar to Schizosaccharomyces pombe protein C637.03

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1774 pfam08611
Fungal protein of unknown function (DUF1774); This is a fungal family of unknown function.
 172-260 3.03e-24

Fungal protein of unknown function (DUF1774); This is a fungal family of unknown function.


:

Pssm-ID: 430105  Cd Length: 95  Bit Score: 93.04  E-value: 3.03e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115533   172 RVFSNVFIWFFAAMYLVPILGFHDWALSLVSAYLFLSIGIGQMFIHLFALQHIFAFIIAGLMTLFAALLFLLPYRQR--- 248
Cdd:pfam08611   1 RILANVFIWVILVVGLFFILAYKDYTLGFSLSYLTLSLGVGQFFTKVIALQWIFAFVIAAVLFVLSLVVAVPKYTGRdri 80

                          90
                  ....*....|....*
gi 19115533   249 ---RAALTGESAPLL 260
Cdd:pfam08611  81 aepEPSTDRERAPLL 95
 
Name Accession Description Interval E-value
DUF1774 pfam08611
Fungal protein of unknown function (DUF1774); This is a fungal family of unknown function.
 172-260 3.03e-24

Fungal protein of unknown function (DUF1774); This is a fungal family of unknown function.


Pssm-ID: 430105  Cd Length: 95  Bit Score: 93.04  E-value: 3.03e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115533   172 RVFSNVFIWFFAAMYLVPILGFHDWALSLVSAYLFLSIGIGQMFIHLFALQHIFAFIIAGLMTLFAALLFLLPYRQR--- 248
Cdd:pfam08611   1 RILANVFIWVILVVGLFFILAYKDYTLGFSLSYLTLSLGVGQFFTKVIALQWIFAFVIAAVLFVLSLVVAVPKYTGRdri 80

                          90
                  ....*....|....*
gi 19115533   249 ---RAALTGESAPLL 260
Cdd:pfam08611  81 aepEPSTDRERAPLL 95
MscK COG3264
Small-conductance mechanosensitive channel MscK [Cell wall/membrane/envelope biogenesis];
174-233 1.98e-03

Small-conductance mechanosensitive channel MscK [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442495 [Multi-domain]  Cd Length: 281  Bit Score: 39.03  E-value: 1.98e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 19115533 174 FSNVFIWFFAAMYLVPILGFhDW-ALSLVSAylFLSIGIGqmfihlFALQHIFAFIIAGLM 233
Cdd:COG3264  65 LIRYLIIVLGLLIALSALGI-DLtALAALAG--ALGVGIG------FGLQDIVSNFISGLI 116
 
Name Accession Description Interval E-value
DUF1774 pfam08611
Fungal protein of unknown function (DUF1774); This is a fungal family of unknown function.
 172-260 3.03e-24

Fungal protein of unknown function (DUF1774); This is a fungal family of unknown function.


Pssm-ID: 430105  Cd Length: 95  Bit Score: 93.04  E-value: 3.03e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115533   172 RVFSNVFIWFFAAMYLVPILGFHDWALSLVSAYLFLSIGIGQMFIHLFALQHIFAFIIAGLMTLFAALLFLLPYRQR--- 248
Cdd:pfam08611   1 RILANVFIWVILVVGLFFILAYKDYTLGFSLSYLTLSLGVGQFFTKVIALQWIFAFVIAAVLFVLSLVVAVPKYTGRdri 80

                          90
                  ....*....|....*
gi 19115533   249 ---RAALTGESAPLL 260
Cdd:pfam08611  81 aepEPSTDRERAPLL 95
MscK COG3264
Small-conductance mechanosensitive channel MscK [Cell wall/membrane/envelope biogenesis];
174-233 1.98e-03

Small-conductance mechanosensitive channel MscK [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442495 [Multi-domain]  Cd Length: 281  Bit Score: 39.03  E-value: 1.98e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 19115533 174 FSNVFIWFFAAMYLVPILGFhDW-ALSLVSAylFLSIGIGqmfihlFALQHIFAFIIAGLM 233
Cdd:COG3264  65 LIRYLIIVLGLLIALSALGI-DLtALAALAG--ALGVGIG------FGLQDIVSNFISGLI 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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