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Conserved domains on  [gi|19112376|ref|NP_595584|]
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uncharacterized protein SPBC17A3.02 [Schizosaccharomyces pombe]

Protein Classification

Aim19 domain-containing protein( domain architecture ID 10563384)

Aim19 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Aim19 pfam10315
Altered inheritance of mitochondria protein 19; This is a family of conserved proteins found ...
 18-116 2.12e-34

Altered inheritance of mitochondria protein 19; This is a family of conserved proteins found in fungi. The function is not known.


:

Pssm-ID: 402092  Cd Length: 111  Bit Score: 114.74  E-value: 2.12e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112376    18 YIPAYAFGGALIASVPRAFKRPYG---------GPFVPGCLLCGGFNAIGGLAIASGDLTNGSGICTAWSIAYLMINATK 88
Cdd:pfam10315   1 PYPAWALSGALLATLPTSPRKPPGlsfskpaliGPTRKSCLLFGAAFALGGYMIYDGDLENGSGFTTAWSLLYLLVNGRK 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 19112376    89 SIKSFR---LYPIALTTFATANAVGYGKTFM 116
Cdd:pfam10315  81 SIKSLRrgrVWPLALSGLALGNAILYGKRFF 111
 
Name Accession Description Interval E-value
Aim19 pfam10315
Altered inheritance of mitochondria protein 19; This is a family of conserved proteins found ...
 18-116 2.12e-34

Altered inheritance of mitochondria protein 19; This is a family of conserved proteins found in fungi. The function is not known.


Pssm-ID: 402092  Cd Length: 111  Bit Score: 114.74  E-value: 2.12e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112376    18 YIPAYAFGGALIASVPRAFKRPYG---------GPFVPGCLLCGGFNAIGGLAIASGDLTNGSGICTAWSIAYLMINATK 88
Cdd:pfam10315   1 PYPAWALSGALLATLPTSPRKPPGlsfskpaliGPTRKSCLLFGAAFALGGYMIYDGDLENGSGFTTAWSLLYLLVNGRK 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 19112376    89 SIKSFR---LYPIALTTFATANAVGYGKTFM 116
Cdd:pfam10315  81 SIKSLRrgrVWPLALSGLALGNAILYGKRFF 111
 
Name Accession Description Interval E-value
Aim19 pfam10315
Altered inheritance of mitochondria protein 19; This is a family of conserved proteins found ...
 18-116 2.12e-34

Altered inheritance of mitochondria protein 19; This is a family of conserved proteins found in fungi. The function is not known.


Pssm-ID: 402092  Cd Length: 111  Bit Score: 114.74  E-value: 2.12e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112376    18 YIPAYAFGGALIASVPRAFKRPYG---------GPFVPGCLLCGGFNAIGGLAIASGDLTNGSGICTAWSIAYLMINATK 88
Cdd:pfam10315   1 PYPAWALSGALLATLPTSPRKPPGlsfskpaliGPTRKSCLLFGAAFALGGYMIYDGDLENGSGFTTAWSLLYLLVNGRK 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 19112376    89 SIKSFR---LYPIALTTFATANAVGYGKTFM 116
Cdd:pfam10315  81 SIKSLRrgrVWPLALSGLALGNAILYGKRFF 111
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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