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Conserved domains on  [gi|19743854|ref|NP_598014|]
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decorin isoform e precursor [Homo sapiens]

Protein Classification

LRRNT domain-containing protein( domain architecture ID 10477771)

LRRNT domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LRRNT pfam01462
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 54-71 1.29e-03

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


:

Pssm-ID: 396168 [Multi-domain]  Cd Length: 28  Bit Score: 32.60  E-value: 1.29e-03
                         10
                 ....*....|....*...
gi 19743854   54 CPFRCQCHLRVVQCSDLG 71
Cdd:pfam01462  2 CPVPCHCSATVVNCSDRG 19
 
Name Accession Description Interval E-value
LRRNT pfam01462
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 54-71 1.29e-03

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 396168 [Multi-domain]  Cd Length: 28  Bit Score: 32.60  E-value: 1.29e-03
                         10
                 ....*....|....*...
gi 19743854   54 CPFRCQCHLRVVQCSDLG 71
Cdd:pfam01462  2 CPVPCHCSATVVNCSDRG 19
LRRNT smart00013
Leucine rich repeat N-terminal domain;
54-71 1.94e-03

Leucine rich repeat N-terminal domain;


Pssm-ID: 214470 [Multi-domain]  Cd Length: 33  Bit Score: 32.29  E-value: 1.94e-03
                          10
                  ....*....|....*...
gi 19743854    54 CPFRCQCHLRVVQCSDLG 71
Cdd:smart00013  2 CPAPCNCSGTAVDCSGRG 19
 
Name Accession Description Interval E-value
LRRNT pfam01462
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 54-71 1.29e-03

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 396168 [Multi-domain]  Cd Length: 28  Bit Score: 32.60  E-value: 1.29e-03
                         10
                 ....*....|....*...
gi 19743854   54 CPFRCQCHLRVVQCSDLG 71
Cdd:pfam01462  2 CPVPCHCSATVVNCSDRG 19
LRRNT smart00013
Leucine rich repeat N-terminal domain;
54-71 1.94e-03

Leucine rich repeat N-terminal domain;


Pssm-ID: 214470 [Multi-domain]  Cd Length: 33  Bit Score: 32.29  E-value: 1.94e-03
                          10
                  ....*....|....*...
gi 19743854    54 CPFRCQCHLRVVQCSDLG 71
Cdd:smart00013  2 CPAPCNCSGTAVDCSGRG 19
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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