|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
221-687 |
2.19e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.19 E-value: 2.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 221 IEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLEIRLCVTIQEANQ 300
Cdd:COG1196 241 LEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 301 LRTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEAN---LQKSQALLEEKQKEEDIEKmketvsrfVQDATI 377
Cdd:COG1196 321 LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEealLEAEAELAEAEEELEELAE--------ELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 378 RTKKEVANTKKQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKLEEMHQRFLVSE 457
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 458 RSKDDLQLRLTRAENRIKQLETDSSEEISRYQEMIQ--KLQNVLESERENCGLVSE------------------------ 511
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEgvKAALLLAGLRGLAGAVAVligveaayeaaleaalaaalqniv 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 512 --------QRLKLQQENKQLRKETESLRKIALEAQKKAKVKISTMEHEFSIKE---RGFEVQLREMEDSNRNSIVELRHL 580
Cdd:COG1196 553 veddevaaAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVAsdlREADARYYVLGDTLLGRTLVAARL 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 581 LATQQKAANRWKEETKKLTESAEIRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQAEE 660
Cdd:COG1196 633 EAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
490 500
....*....|....*....|....*..
gi 153791839 661 RAASASQQLSVITVQRRKAASLMNLEN 687
Cdd:COG1196 713 EEERLEEELEEEALEEQLEAEREELLE 739
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
221-537 |
5.51e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.77 E-value: 5.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 221 IEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKdvvsahgREEASDRRLQQLQSSIKQLEIRLCVTIQEANQ 300
Cdd:TIGR02168 679 IEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRK-------ELEELSRQISALRKDLARLEAEVEQLEERIAQ 751
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 301 LRTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQ--ALLEEKQKEEDIEK-------MKETVSRF 371
Cdd:TIGR02168 752 LSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKAlrEALDELRAELTLLNeeaanlrERLESLER 831
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 372 VQDATIRTKKEVANTKKQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKLE---- 447
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELEskrs 911
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 448 EMHQRFLVSERSKDDLQLRLTRAENRIKQLETDSSEEISRYQEMIQKLQNVLESEREncglvseqrlKLQQENKQLRKET 527
Cdd:TIGR02168 912 ELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEE----------EARRRLKRLENKI 981
|
330
....*....|
gi 153791839 528 ESLRKIALEA 537
Cdd:TIGR02168 982 KELGPVNLAA 991
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
155-662 |
3.24e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.99 E-value: 3.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 155 SQELDRLHKLYQEHMTEAQIHVFESQKQKDQLFDFQQLTKQLHVTNENMEVTNQQFLKTVTEQSVIIEQLRKKLRQAKLE 234
Cdd:PTZ00121 1251 NEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKK 1330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 235 LRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLEiRLCVTIQEANQLRTENTHLEKQTRE 314
Cdd:PTZ00121 1331 ADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAK-KKAEEKKKADEAKKKAEEDKKKADE 1409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 315 LQAKcnELENERYEAIVRARNSMQLLEEAnlqKSQAllEEKQKEEDIEKMKEtvsrfvqdatirTKKEVANTKKQCniQI 394
Cdd:PTZ00121 1410 LKKA--AAAKKKADEAKKKAEEKKKADEA---KKKA--EEAKKADEAKKKAE------------EAKKAEEAKKKA--EE 1468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 395 SRLTEELSAlQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNEsDYRKLEEMHQRFLVSERSKDDLQLRLTRAENRI 474
Cdd:PTZ00121 1469 AKKADEAKK-KAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKAD-EAKKAEEAKKADEAKKAEEAKKADEAKKAEEKK 1546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 475 KQLETDSSEEISRYQEMIQKLQNVLESERENcglvseQRLKLQQENKQLRKETESLRKIALEAQKKAKVKISTMEHEFSI 554
Cdd:PTZ00121 1547 KADELKKAEELKKAEEKKKAEEAKKAEEDKN------MALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKI 1620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 555 KERgfevQLREMEDSnRNSIVELRHLLATQQKAAnrwkEETKKLTESAEIRINNLKSELSRQKLHTQElLSQLEMANEKV 634
Cdd:PTZ00121 1621 KAE----ELKKAEEE-KKKVEQLKKKEAEEKKKA----EELKKAEEENKIKAAEEAKKAEEDKKKAEE-AKKAEEDEKKA 1690
|
490 500
....*....|....*....|....*...
gi 153791839 635 AENEKLILEHQEKANRLQRRLSQAEERA 662
Cdd:PTZ00121 1691 AEALKKEAEEAKKAEELKKKEAEEKKKA 1718
|
|
| CCCAP |
pfam15964 |
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in ... |
56-669 |
2.34e-06 |
|
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in eukaryotes. CCCAP is also known as SDCCAG8, serologically defined colon cancer antigen 8. It is associated with the centrosome.
Pssm-ID: 435040 [Multi-domain] Cd Length: 703 Bit Score: 51.06 E-value: 2.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 56 LAPLVTEYDKHLGELNGQLKYYQKQVGEMKLQLENVIKENERLHSELKD-AVEKKLEAFPLGTEVGT--DIYADDETVRN 132
Cdd:pfam15964 112 LVPIINDQSQYIHHLEAEVKFCKEELSEMKQRVQVVVLENEKLQQELKSqTQEETLREQTLLDSSGNmqNSWCTPEDSRV 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 133 LQEQLQLANQEKTQAVELWQTVSQELDRLHKLYQEHMTEAQIHVFESQkqkdqlfdfqqltkqlhvtnenmevtnqqflk 212
Cdd:pfam15964 192 HQTSKRPASHNLAERLKSATTGEDEKWRLELEKLKLLYEAKTEVLESQ-------------------------------- 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 213 tvteqsviIEQLRKKLrqaklelrvavakvEELTNVTEDLQGQMKKKEKdVVSAHGREEASDRRLQQLQSSIKQLEIRLC 292
Cdd:pfam15964 240 --------VKSLRKDL--------------AESQKTCEDLKERLKHKES-LVAASTSSRVGGLCLKCAQHEAVLAQTHTN 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 293 VTIQEANQLRTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDIEKMKETVSRFV 372
Cdd:pfam15964 297 VHMQTIERLTKERDDLMSALVSVRSSLAEAQQRESSAYEQVKQAVQMTEEANFEKTKALIQCEQLKSELERQKERLEKEL 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 373 QDATIRTKKEVANTKKQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKL-EEMHQ 451
Cdd:pfam15964 377 ASQQEKRAQEKEALRKEMKKEREELGATMLALSQNVAQLEAQVEKVTREKNSLVSQLEEAQKQLASQEMDVTKVcGEMRY 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 452 RFLVSERSKDDLQLRLTRAENR-IKQLETDSSE------EISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLR 524
Cdd:pfam15964 457 QLNQTKMKKDEAEKEHREYRTKtGRQLEIKDQEieklglELSESKQRLEQAQQDAARAREECLKLTELLGESEHQLHLTR 536
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 525 KETESLRKIALEAQKKAKVKISTMEHEFSIKergfevqLREMEDSNRNSIVELRHLLATQQKAANRWKEETKKLTESAEI 604
Cdd:pfam15964 537 LEKESIQQSFSNEAKAQALQAQQREQELTQK-------MQQMEAQHDKTVNEQYSLLTSQNTFIAKLKEECCTLAKKLEE 609
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 153791839 605 RINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQAEERAASASQQL 669
Cdd:pfam15964 610 ITQKSRSEVEQLSQEKEYLQDRLEKLQKRNEELEEQCVQHGRMHERMKQRLRQLDKHCQATAQQL 674
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
69-370 |
2.00e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.59 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 69 ELNGQLKYYQKQVGEMKLQLENVIKENER-------LHSELKDAVEKKLEAFPLGTEVGTDIYADDETVRNLQEQLQLAN 141
Cdd:TIGR02169 671 SEPAELQRLRERLEGLKRELSSLQSELRRienrldeLSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE 750
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 142 QEKTQAVELWQTVSQELDRLhklyqehmtEAQIHvfesqKQKDQLFDFQQLTKQLHVTNENMEVTNQQflKTVTEQSVII 221
Cdd:TIGR02169 751 QEIENVKSELKELEARIEEL---------EEDLH-----KLEEALNDLEARLSHSRIPEIQAELSKLE--EEVSRIEARL 814
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 222 EQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLEIRLcvtiqeaNQL 301
Cdd:TIGR02169 815 REIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRL-------GDL 887
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 153791839 302 RTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQ------ALLEEKQKEEDIEKMKETVSR 370
Cdd:TIGR02169 888 KKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEiedpkgEDEEIPEEELSLEDVQAELQR 962
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
87-288 |
5.25e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 5.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 87 QLENVIKENERLHSELKDAVEKKLEAFPLGTEVGTDIYADDETVRNLQEQLQLANQEKTQAVELWQTVSQELDRLHKLYQ 166
Cdd:COG4942 28 ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 167 EHMTEAQIHvfeSQKQKDQLF----DFQQLTKQLHVTNENMEVTNQQfLKTVTEQSVIIEQLRKKLRQAKLELRVAVAKV 242
Cdd:COG4942 108 ELLRALYRL---GRQPPLALLlspeDFLDAVRRLQYLKYLAPARREQ-AEELRADLAELAALRAELEAERAELEALLAEL 183
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 153791839 243 EELTnvtEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLE 288
Cdd:COG4942 184 EEER---AALEALKAERQKLLARLEKELAELAAELAELQQEAEELE 226
|
|
| CYP51-like |
cd11042 |
cytochrome P450 family 51 and similar cytochrome P450s; This family is composed of cytochrome ... |
56-100 |
7.81e-03 |
|
cytochrome P450 family 51 and similar cytochrome P450s; This family is composed of cytochrome P450 51 (CYP51 or sterol 14alpha-demethylase) and related cytochrome P450s. CYP51 is the only cytochrome P450 enzyme with a conserved function across animals, fungi, and plants, in the synthesis of essential sterols. In mammals, it is expressed in many different tissues, with highest expression in testis, ovary, adrenal gland, prostate, liver, kidney, and lung. In fungi, CYP51 is a significant drug target for treatment of human protozoan infections. In plants, it functions within a specialized defense-related metabolic pathway. CYP51 is also found in several bacterial species. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Pssm-ID: 410668 [Multi-domain] Cd Length: 416 Bit Score: 39.12 E-value: 7.81e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 153791839 56 LAPLVTEYDKHLGELNGQLKYyqKQVGEMKLqLENVIKENERLHS 100
Cdd:cd11042 246 LEALREEQKEVLGDGDDPLTY--DVLKEMPL-LHACIKETLRLHP 287
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
221-687 |
2.19e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.19 E-value: 2.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 221 IEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLEIRLCVTIQEANQ 300
Cdd:COG1196 241 LEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 301 LRTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEAN---LQKSQALLEEKQKEEDIEKmketvsrfVQDATI 377
Cdd:COG1196 321 LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEealLEAEAELAEAEEELEELAE--------ELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 378 RTKKEVANTKKQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKLEEMHQRFLVSE 457
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 458 RSKDDLQLRLTRAENRIKQLETDSSEEISRYQEMIQ--KLQNVLESERENCGLVSE------------------------ 511
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEgvKAALLLAGLRGLAGAVAVligveaayeaaleaalaaalqniv 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 512 --------QRLKLQQENKQLRKETESLRKIALEAQKKAKVKISTMEHEFSIKE---RGFEVQLREMEDSNRNSIVELRHL 580
Cdd:COG1196 553 veddevaaAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVAsdlREADARYYVLGDTLLGRTLVAARL 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 581 LATQQKAANRWKEETKKLTESAEIRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQAEE 660
Cdd:COG1196 633 EAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
490 500
....*....|....*....|....*..
gi 153791839 661 RAASASQQLSVITVQRRKAASLMNLEN 687
Cdd:COG1196 713 EEERLEEELEEEALEEQLEAEREELLE 739
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
224-542 |
3.36e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.42 E-value: 3.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 224 LRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAhgreeasdRRLQQLQSSIKQLEIRLcvTIQEANQLRT 303
Cdd:COG1196 170 YKERKEEAERKLEATEENLERLEDILGELERQLEPLERQAEKA--------ERYRELKEELKELEAEL--LLLKLRELEA 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 304 ENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQksqalLEEKQKEEDIEKMKETVSRFVQDATIRTKKEV 383
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELE-----LEEAQAEEYELLAELARLEQDIARLEERRREL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 384 ANTKKQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKLEEMHQRFLVSERSKDDL 463
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 153791839 464 QLRLTRAENRIKQLETDSSEEISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETESLRKIALEAQKKAK 542
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
221-537 |
5.51e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.77 E-value: 5.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 221 IEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKdvvsahgREEASDRRLQQLQSSIKQLEIRLCVTIQEANQ 300
Cdd:TIGR02168 679 IEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRK-------ELEELSRQISALRKDLARLEAEVEQLEERIAQ 751
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 301 LRTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQ--ALLEEKQKEEDIEK-------MKETVSRF 371
Cdd:TIGR02168 752 LSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKAlrEALDELRAELTLLNeeaanlrERLESLER 831
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 372 VQDATIRTKKEVANTKKQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKLE---- 447
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELEskrs 911
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 448 EMHQRFLVSERSKDDLQLRLTRAENRIKQLETDSSEEISRYQEMIQKLQNVLESEREncglvseqrlKLQQENKQLRKET 527
Cdd:TIGR02168 912 ELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEE----------EARRRLKRLENKI 981
|
330
....*....|
gi 153791839 528 ESLRKIALEA 537
Cdd:TIGR02168 982 KELGPVNLAA 991
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
338-683 |
6.03e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.78 E-value: 6.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 338 QLLEEANLQKSQALLEEKQKEEDIEKMKETVSRFVQDATIRTKKEVANTKKQCNIQISRLTEELSALQMECAEKQGQIER 417
Cdd:TIGR02169 190 DLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 418 VIKEKKAVEEELEKIyREGRGNESDyRKLEEMHQRFLVSERSKDDLQLRLTRAENRIKQLEtdssEEISRYQEMIQKLQN 497
Cdd:TIGR02169 270 IEQLLEELNKKIKDL-GEEEQLRVK-EKIGELEAEIASLERSIAEKERELEDAEERLAKLE----AEIDKLLAEIEELER 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 498 VLESERencglvsEQRLKLQQENKQLRKETESLRKIALEAQKKAKvkisTMEHEFSIKERGFEVQLREMEDSNRnsivEL 577
Cdd:TIGR02169 344 EIEEER-------KRRDKLTEEYAELKEELEDLRAELEEVDKEFA----ETRDELKDYREKLEKLKREINELKR----EL 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 578 RHLLATQQKAANRWKEETKKLtESAEIRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQ 657
Cdd:TIGR02169 409 DRLQEELQRLSEELADLNAAI-AGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSK 487
|
330 340
....*....|....*....|....*...
gi 153791839 658 AEER--AASASQQLSVITVQRRKAASLM 683
Cdd:TIGR02169 488 LQRElaEAEAQARASEERVRGGRAVEEV 515
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
125-655 |
6.83e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 59.18 E-value: 6.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 125 ADDETVRNLQEQLQLANQEKTQAVELWQTVSQELDRLHKLYQEHMTEAQIHVFESQKQKDQLFDFQQLTKQLHVTNENME 204
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 205 VTNQQFLKTVTEQSVIIEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSI 284
Cdd:COG1196 323 EELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQL 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 285 KQLEIRLCVTIQEANQLRTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDIEKM 364
Cdd:COG1196 403 EELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAEL 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 365 KETVSRfvqdatirtKKEVANTKKQcnIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYR 444
Cdd:COG1196 483 LEELAE---------AAARLLLLLE--AEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNI 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 445 KLEEMHQRFLVSERSKDDLQLRLTR-AENRIKQLETDSSEEISRYQEMIQKLQNVLESERENCGLVSEQRLkLQQENKQL 523
Cdd:COG1196 552 VVEDDEVAAAAIEYLKAAKAGRATFlPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTL-LGRTLVAA 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 524 RKETESLRKIALEAQKKAKVKISTMEHEFSIKERGFEVQLREMEDSNRNSIVELRHLLATQQKAANRWKEETKKLTESAE 603
Cdd:COG1196 631 RLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELA 710
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 153791839 604 IRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEH--------------QEKANRLQRRL 655
Cdd:COG1196 711 EAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEaleelpeppdleelERELERLEREI 776
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
180-497 |
5.08e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.60 E-value: 5.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 180 QKQKDQLFDFQQ--LTKQLHVTNENMEVTNQQFLKTVTEQSVIIEQLRK---KLRQAKLELRVAVAKVEELTNVTEDLQG 254
Cdd:TIGR02168 216 KELKAELRELELalLVLRLEELREELEELQEELKEAEEELEELTAELQEleeKLEELRLEVSELEEEIEELQKELYALAN 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 255 QMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLEIRLCVTIQEANQLRTENTHLEKQTRELQAKCNELENERYEAIVRAR 334
Cdd:TIGR02168 296 EISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLE 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 335 NSMQLLEEANLQKSQALLEEKQKEEDIEKMKETVSRfvqdatirTKKEVANTKKQCNIQISRLTE-ELSALQMECAEKQG 413
Cdd:TIGR02168 376 ELEEQLETLRSKVAQLELQIASLNNEIERLEARLER--------LEDRRERLQQEIEELLKKLEEaELKELQAELEELEE 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 414 QIERVIKEKKAVEEELEKIYREGRGNESDYRKLEEMHQRflvserskddlqlrltrAENRIKQLETDSSEEISRYQEMIQ 493
Cdd:TIGR02168 448 ELEELQEELERLEEALEELREELEEAEQALDAAERELAQ-----------------LQARLDSLERLQENLEGFSEGVKA 510
|
....
gi 153791839 494 KLQN 497
Cdd:TIGR02168 511 LLKN 514
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
67-684 |
9.00e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 55.83 E-value: 9.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 67 LGELNGQLKYYQKQV--GEMKLQLENVIKENER--LHSELKDAVEKKLEAFPLGTEVGTDIYADDETVRNLQEQLQLANQ 142
Cdd:TIGR02168 195 LNELERQLKSLERQAekAERYKELKAELRELELalLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 143 EKTQavelwqtVSQELDRLHKLYQEHMTEAQIHVFESQKQKDQLFDFQQLTKQLHVTNENMEVTNQQFLKTVTEQSVIIE 222
Cdd:TIGR02168 275 EVSE-------LEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 223 QLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLEIRLCVTIQEANQLR 302
Cdd:TIGR02168 348 ELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELL 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 303 TENThlEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDIE------KMKETVSRFVQDAT 376
Cdd:TIGR02168 428 KKLE--EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAqlqarlDSLERLQENLEGFS 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 377 iRTKKEVANTKKQCNIQISRLTEELS------------------ALQMECAEKQGQIERVIKEKK----AVEEELEKIYR 434
Cdd:TIGR02168 506 -EGVKALLKNQSGLSGILGVLSELISvdegyeaaieaalggrlqAVVVENLNAAKKAIAFLKQNElgrvTFLPLDSIKGT 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 435 EGRGNESDYRKLEEMHQRFLVSERSKDDL-----------------------QLRLTRAENRIKQLETDS-SEEISRYQE 490
Cdd:TIGR02168 585 EIQGNDREILKNIEGFLGVAKDLVKFDPKlrkalsyllggvlvvddldnaleLAKKLRPGYRIVTLDGDLvRPGGVITGG 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 491 MIQKLQNVLESERENCGLvSEQRLKLQQENKQLRKETESLRKiALEAQKKAKVKISTMEHEFSIKERGFEVQLREMEDSN 570
Cdd:TIGR02168 665 SAKTNSSILERRREIEEL-EEKIEELEEKIAELEKALAELRK-ELEELEEELEQLRKELEELSRQISALRKDLARLEAEV 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 571 RNSIVELRHLLATQQKAANRWKEETKKLTES------AEIRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEH 644
Cdd:TIGR02168 743 EQLEERIAQLSKELTELEAEIEELEERLEEAeeelaeAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANL 822
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 153791839 645 QEKANRLQRRLSQAEERAASASQQLSVITVQRRKAASLMN 684
Cdd:TIGR02168 823 RERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIE 862
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
302-657 |
3.21e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.91 E-value: 3.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 302 RTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDIEKMKETVSRFVQDATirtkk 381
Cdd:TIGR02168 676 RREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIA----- 750
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 382 evantkkQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKLEEMHQRflvserskd 461
Cdd:TIGR02168 751 -------QLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTL--------- 814
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 462 dLQLRLTRAENRIKQLEtdssEEISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETESLrkiaLEAQKKA 541
Cdd:TIGR02168 815 -LNEEAANLRERLESLE----RRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL----LNERASL 885
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 542 KVKISTMEHEFSIKERgfevQLREMEDSNRNSIVELRHLLATQQKAANRWkeetkkltESAEIRINNLKSELSrqklhtQ 621
Cdd:TIGR02168 886 EEALALLRSELEELSE----ELRELESKRSELRRELEELREKLAQLELRL--------EGLEVRIDNLQERLS------E 947
|
330 340 350
....*....|....*....|....*....|....*.
gi 153791839 622 ELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQ 657
Cdd:TIGR02168 948 EYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKE 983
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
155-662 |
3.24e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.99 E-value: 3.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 155 SQELDRLHKLYQEHMTEAQIHVFESQKQKDQLFDFQQLTKQLHVTNENMEVTNQQFLKTVTEQSVIIEQLRKKLRQAKLE 234
Cdd:PTZ00121 1251 NEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKK 1330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 235 LRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLEiRLCVTIQEANQLRTENTHLEKQTRE 314
Cdd:PTZ00121 1331 ADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAK-KKAEEKKKADEAKKKAEEDKKKADE 1409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 315 LQAKcnELENERYEAIVRARNSMQLLEEAnlqKSQAllEEKQKEEDIEKMKEtvsrfvqdatirTKKEVANTKKQCniQI 394
Cdd:PTZ00121 1410 LKKA--AAAKKKADEAKKKAEEKKKADEA---KKKA--EEAKKADEAKKKAE------------EAKKAEEAKKKA--EE 1468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 395 SRLTEELSAlQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNEsDYRKLEEMHQRFLVSERSKDDLQLRLTRAENRI 474
Cdd:PTZ00121 1469 AKKADEAKK-KAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKAD-EAKKAEEAKKADEAKKAEEAKKADEAKKAEEKK 1546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 475 KQLETDSSEEISRYQEMIQKLQNVLESERENcglvseQRLKLQQENKQLRKETESLRKIALEAQKKAKVKISTMEHEFSI 554
Cdd:PTZ00121 1547 KADELKKAEELKKAEEKKKAEEAKKAEEDKN------MALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKI 1620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 555 KERgfevQLREMEDSnRNSIVELRHLLATQQKAAnrwkEETKKLTESAEIRINNLKSELSRQKLHTQElLSQLEMANEKV 634
Cdd:PTZ00121 1621 KAE----ELKKAEEE-KKKVEQLKKKEAEEKKKA----EELKKAEEENKIKAAEEAKKAEEDKKKAEE-AKKAEEDEKKA 1690
|
490 500
....*....|....*....|....*...
gi 153791839 635 AENEKLILEHQEKANRLQRRLSQAEERA 662
Cdd:PTZ00121 1691 AEALKKEAEEAKKAEELKKKEAEEKKKA 1718
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
62-556 |
8.40e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.84 E-value: 8.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 62 EYDKHLGELNGQLKYYQKQVGEMKLQLENVIKENERLHSELKdAVEKKLEAFPLGTE----VGTDIYADDETVRNLQEQL 137
Cdd:PTZ00121 1319 EAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAE-AAEEKAEAAEKKKEeakkKADAAKKKAEEKKKADEAK 1397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 138 QLANQEKTQAVELWQTVS--QELDRLHKLYQE--HMTEAQIHVFESQKQKDQLFDFQQLTKQLHVTNENMEVTNQQFLKT 213
Cdd:PTZ00121 1398 KKAEEDKKKADELKKAAAakKKADEAKKKAEEkkKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKK 1477
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 214 VTEQSVIIEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDrrLQQLQSSIKQLEIRLCV 293
Cdd:PTZ00121 1478 KAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADE--AKKAEEKKKADELKKAE 1555
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 294 TIQEANQLR-TENTHLEKQTRELQAKCNELENERYEAivRARNSMQLLEEANLQKSQALL---EEKQKEEDIEKMKEtvs 369
Cdd:PTZ00121 1556 ELKKAEEKKkAEEAKKAEEDKNMALRKAEEAKKAEEA--RIEEVMKLYEEEKKMKAEEAKkaeEAKIKAEELKKAEE--- 1630
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 370 rfVQDATIRTKKEVANTKKQCNiQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKLEEM 449
Cdd:PTZ00121 1631 --EKKKVEQLKKKEAEEKKKAE-ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEEL 1707
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 450 HQRflVSERSKDDLQLRLTRAENRIKqletdsSEEISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETES 529
Cdd:PTZ00121 1708 KKK--EAEEKKKAEELKKAEEENKIK------AEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEA 1779
|
490 500
....*....|....*....|....*..
gi 153791839 530 LrkiaLEAQKKAKVKISTMEHEFSIKE 556
Cdd:PTZ00121 1780 V----IEEELDEEDEKRRMEVDKKIKD 1802
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
327-532 |
1.49e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.84 E-value: 1.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 327 YEAIVRARNSMQLLEEANlQKSQALLEEKQKEEDIEKMKETVSRFVQdatirtkkevantkkqcNIQISRLTEELSALQM 406
Cdd:COG4913 241 HEALEDAREQIELLEPIR-ELAERYAAARERLAELEYLRAALRLWFA-----------------QRRLELLEAELEELRA 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 407 ECAEKQGQIERVIKEKKAVEEELEKIYREGRGNesDYRKLEEMHQRFLVSERSKDDLQLRLTRAENRIKQLETDSSEEIS 486
Cdd:COG4913 303 ELARLEAELERLEARLDALREELDELEAQIRGN--GGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAE 380
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 153791839 487 RYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETESLRK 532
Cdd:COG4913 381 EFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEA 426
|
|
| CCCAP |
pfam15964 |
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in ... |
56-669 |
2.34e-06 |
|
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in eukaryotes. CCCAP is also known as SDCCAG8, serologically defined colon cancer antigen 8. It is associated with the centrosome.
Pssm-ID: 435040 [Multi-domain] Cd Length: 703 Bit Score: 51.06 E-value: 2.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 56 LAPLVTEYDKHLGELNGQLKYYQKQVGEMKLQLENVIKENERLHSELKD-AVEKKLEAFPLGTEVGT--DIYADDETVRN 132
Cdd:pfam15964 112 LVPIINDQSQYIHHLEAEVKFCKEELSEMKQRVQVVVLENEKLQQELKSqTQEETLREQTLLDSSGNmqNSWCTPEDSRV 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 133 LQEQLQLANQEKTQAVELWQTVSQELDRLHKLYQEHMTEAQIHVFESQkqkdqlfdfqqltkqlhvtnenmevtnqqflk 212
Cdd:pfam15964 192 HQTSKRPASHNLAERLKSATTGEDEKWRLELEKLKLLYEAKTEVLESQ-------------------------------- 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 213 tvteqsviIEQLRKKLrqaklelrvavakvEELTNVTEDLQGQMKKKEKdVVSAHGREEASDRRLQQLQSSIKQLEIRLC 292
Cdd:pfam15964 240 --------VKSLRKDL--------------AESQKTCEDLKERLKHKES-LVAASTSSRVGGLCLKCAQHEAVLAQTHTN 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 293 VTIQEANQLRTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDIEKMKETVSRFV 372
Cdd:pfam15964 297 VHMQTIERLTKERDDLMSALVSVRSSLAEAQQRESSAYEQVKQAVQMTEEANFEKTKALIQCEQLKSELERQKERLEKEL 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 373 QDATIRTKKEVANTKKQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKL-EEMHQ 451
Cdd:pfam15964 377 ASQQEKRAQEKEALRKEMKKEREELGATMLALSQNVAQLEAQVEKVTREKNSLVSQLEEAQKQLASQEMDVTKVcGEMRY 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 452 RFLVSERSKDDLQLRLTRAENR-IKQLETDSSE------EISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLR 524
Cdd:pfam15964 457 QLNQTKMKKDEAEKEHREYRTKtGRQLEIKDQEieklglELSESKQRLEQAQQDAARAREECLKLTELLGESEHQLHLTR 536
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 525 KETESLRKIALEAQKKAKVKISTMEHEFSIKergfevqLREMEDSNRNSIVELRHLLATQQKAANRWKEETKKLTESAEI 604
Cdd:pfam15964 537 LEKESIQQSFSNEAKAQALQAQQREQELTQK-------MQQMEAQHDKTVNEQYSLLTSQNTFIAKLKEECCTLAKKLEE 609
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 153791839 605 RINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQAEERAASASQQL 669
Cdd:pfam15964 610 ITQKSRSEVEQLSQEKEYLQDRLEKLQKRNEELEEQCVQHGRMHERMKQRLRQLDKHCQATAQQL 674
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
118-636 |
5.45e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 49.73 E-value: 5.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 118 EVGTDIYADDETVRNLQEQLQLANQEKTQAVELwqTVSQELDRLHKLYQEHMTEAQIHVFESQKQKDQLFDFQQltkQLH 197
Cdd:pfam15921 228 ELDTEISYLKGRIFPVEDQLEALKSESQNKIEL--LLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQS---QLE 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 198 VTNENMEVTNQQFLKTVTEQSVIIEQLRKKLRQAKlelRVAVAKVEELTN--VTEDLQGQMKKKEKDVVSAHGREeaSDR 275
Cdd:pfam15921 303 IIQEQARNQNSMYMRQLSDLESTVSQLRSELREAK---RMYEDKIEELEKqlVLANSELTEARTERDQFSQESGN--LDD 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 276 RLQQLQSSIKQLEIRLCVTIQEANQLRTENT----HLEKQTRELQAKcnELENERYEAIVRARNSmqlleEANLQKSQAL 351
Cdd:pfam15921 378 QLQKLLADLHKREKELSLEKEQNKRLWDRDTgnsiTIDHLRRELDDR--NMEVQRLEALLKAMKS-----ECQGQMERQM 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 352 LEEKQKEEDIEKMKETVsrfvqdATIRTKKEVantkkqcniqISRLTEELSALQMECAEKqgqiERVIKEKKAVEEELEK 431
Cdd:pfam15921 451 AAIQGKNESLEKVSSLT------AQLESTKEM----------LRKVVEELTAKKMTLESS----ERTVSDLTASLQEKER 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 432 IYREGRGNESDYRKLEEMHQRFLVSERSKDDlQLRLTRAEN---RIKQLETDSSEEISRYQemIQKLQNVLESERENCGL 508
Cdd:pfam15921 511 AIEATNAEITKLRSRVDLKLQELQHLKNEGD-HLRNVQTECealKLQMAEKDKVIEILRQQ--IENMTQLVGQHGRTAGA 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 509 VSEQRLKLQQENKQLRKETESLRkiALEAQKKAKV-----KISTMEHEFSIKERGFEVQLREMEDsnrnsIVELRHLLAT 583
Cdd:pfam15921 588 MQVEKAQLEKEINDRRLELQEFK--ILKDKKDAKIreleaRVSDLELEKVKLVNAGSERLRAVKD-----IKQERDQLLN 660
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 153791839 584 QQKAAnrwKEETKKLTESAEIRINNLKSELSRQKLHTQELLSQLEMANEKVAE 636
Cdd:pfam15921 661 EVKTS---RNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQ 710
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
444-686 |
1.01e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.16 E-value: 1.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 444 RKLEEMHQRFLVSERSKDDLQLRLTRAENRIKQLETDSSEEISRYQEMIQKLQNVLESEREncglvSEQRLKLQQENKQL 523
Cdd:COG1196 239 AELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELAR-----LEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 524 RKETESLRKIALEAQKKAKVKISTMEHEFSIKERGFEVQLREMEDSNRNSIVELRHLLATQQKAANRWKEETKKLTESAE 603
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 604 IRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQAEERAASASQQLSVITVQRRKAASLM 683
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
...
gi 153791839 684 NLE 686
Cdd:COG1196 474 LLE 476
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
353-678 |
4.29e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.66 E-value: 4.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 353 EEKQKEEDIEKMKETVSRFVQDATIRTKKEVANTKKQCN--IQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELE 430
Cdd:pfam17380 234 EKMERRKESFNLAEDVTTMTPEYTVRYNGQTMTENEFLNqlLHIVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 431 KIYREGRGNESDYRKLEEMHQRFLVSERskddLQLRLTRAENRIKQLETDSSEEISRYQEMIQKLQNVLESERencglvs 510
Cdd:pfam17380 314 RRRKLEEAEKARQAEMDRQAAIYAEQER----MAMERERELERIRQEERKRELERIRQEEIAMEISRMRELER------- 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 511 eQRLKLQQENKQLRKETESLRKIAL---EAQKKAKVKISTMEHEFSIKERGFEVQLREMED--------------SNRNS 573
Cdd:pfam17380 383 -LQMERQQKNERVRQELEAARKVKIleeERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEeraremervrleeqERQQQ 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 574 IVELRHLLATQQKAANRWKEETKKLTESAEIRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQR 653
Cdd:pfam17380 462 VERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEE 541
|
330 340
....*....|....*....|....*.
gi 153791839 654 RLSQAE-ERAASASQQLSVITVQRRK 678
Cdd:pfam17380 542 RRKQQEmEERRRIQEQMRKATEERSR 567
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
87-359 |
5.07e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 5.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 87 QLENVIKENERLHSELKDAVEKKLEAFPLGTEVGTDIYADDETVRNLQEQLQLANQEKTQAVELWQTVSQELDRLHKLYQ 166
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE 760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 167 EHMTEAQIHVFESQKQKDQLFD-FQQLTKQLHVTNENMEVTNQQFlktvTEQSVIIEQLRKKLRQAKLELRVAVAKVEEL 245
Cdd:TIGR02168 761 AEIEELEERLEEAEEELAEAEAeIEELEAQIEQLKEELKALREAL----DELRAELTLLNEEAANLRERLESLERRIAAT 836
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 246 TNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLEIRLCVTIQEANQLRTENTHLEKQTRELQAKCNELENE 325
Cdd:TIGR02168 837 ERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRE 916
|
250 260 270
....*....|....*....|....*....|....
gi 153791839 326 RYEAivrarnsMQLLEEANLQKSQALLEEKQKEE 359
Cdd:TIGR02168 917 LEEL-------REKLAQLELRLEGLEVRIDNLQE 943
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
53-549 |
7.46e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 46.26 E-value: 7.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 53 QSFLAPLVTEYDKHLGELNGQLKYYQKQVGEMKLQLEnVIKENERLHSELKDAVEKKLEAF--PLGTEVGTDIYADDETV 130
Cdd:pfam15921 266 QDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLE-IIQEQARNQNSMYMRQLSDLESTvsQLRSELREAKRMYEDKI 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 131 RNLQEQLQLANQEKTQAVELWQTVSQEL----DRLHKLYQE-HMTEAQIHVFESQKQKDQLFDFQQLTKQLHVTNE---- 201
Cdd:pfam15921 345 EELEKQLVLANSELTEARTERDQFSQESgnldDQLQKLLADlHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRElddr 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 202 NMEVTN-QQFLKTVTEQSVIIEQLRKKLRQAKLElrvAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQL 280
Cdd:pfam15921 425 NMEVQRlEALLKAMKSECQGQMERQMAAIQGKNE---SLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDL 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 281 QSS--------------IKQLEIRLCVTIQEANQLRTENTHLEKQTRELQA-KCNELENERYEAIVRAR--NSMQLLEEA 343
Cdd:pfam15921 502 TASlqekeraieatnaeITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEAlKLQMAEKDKVIEILRQQieNMTQLVGQH 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 344 NLQKSQALLEEKQKEEDIEKMKETVSRFvqdATIRTKKEVantkkqcniQISRLTEELSALQMECAEKQGQIERVIKEKK 423
Cdd:pfam15921 582 GRTAGAMQVEKAQLEKEINDRRLELQEF---KILKDKKDA---------KIRELEARVSDLELEKVKLVNAGSERLRAVK 649
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 424 AVEEELEKIYREGRGNESDYRKLEEMHQRFLVSERSKDD----------LQLRLTRAE-----NRIKQLE---------- 478
Cdd:pfam15921 650 DIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEemetttnklkMQLKSAQSEleqtrNTLKSMEgsdghamkva 729
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 479 -------TDSSEEISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETESLR---KIALEAQKKAKVKISTM 548
Cdd:pfam15921 730 mgmqkqiTAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAgelEVLRSQERRLKEKVANM 809
|
.
gi 153791839 549 E 549
Cdd:pfam15921 810 E 810
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
60-428 |
2.17e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.67 E-value: 2.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 60 VTEYDKHLGELNGQLKYYQKQVGEMKLQLENVIK-----ENERLHSELKDAVEKKLEAFPlGTEVGTDIYADDETVRNLQ 134
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQqlerlRREREKAERYQALLKEKREYE-GYELLKEKEALERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 135 EQLQLANQEKTQAVELWQTVSQELDRLHKLYQEhmTEAQIHVFESQKQKDQLFDFQQLTKQLHVTNENMEVTNQQflktv 214
Cdd:TIGR02169 244 RQLASLEEELEKLTEEISELEKRLEEIEQLLEE--LNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERE----- 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 215 teqsviIEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSS-------IKQL 287
Cdd:TIGR02169 317 ------LEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEfaetrdeLKDY 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 288 EIRLCVTIQEANQLRTENTHLEKQTRELQAKCNELENEryeaIVRARNSMQLLEEANLQKSQALLEEKQKEEDIEKMKET 367
Cdd:TIGR02169 391 REKLEKLKREINELKRELDRLQEELQRLSEELADLNAA----IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSK 466
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153791839 368 VSRfvqdatirtkkevantkkqcniQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEE 428
Cdd:TIGR02169 467 YEQ----------------------ELYDLKEEYDRVEKELSKLQRELAEAEAQARASEER 505
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
210-435 |
7.61e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 7.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 210 FLKTVTEQSVIIEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKkkekdvvsahgreeASDRRLQQLQSSIKQLEI 289
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA--------------ALERRIAALARRIRALEQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 290 RLCVTIQEANQLRTENTHLEKQTRELQAKCNELENERY--------------EAIVRARNSMQLLEEANLQKSQALLEEK 355
Cdd:COG4942 77 ELAALEAELAELEKEIAELRAELEAQKEELAELLRALYrlgrqpplalllspEDFLDAVRRLQYLKYLAPARREQAEELR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 356 QKEEDIEKMKETVSRfVQDATIRTKKEVANTKKQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYRE 435
Cdd:COG4942 157 ADLAELAALRAELEA-ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
171-661 |
7.69e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 7.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 171 EAQIHVFESQKQKDQLFDFQQLTKQLHVTNENMEVTNQQFLKTVTEQSVIIEQLRKKLRQAKL--------ELRVA--VA 240
Cdd:PTZ00121 1061 EAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKaedarkaeEARKAedAR 1140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 241 KVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRlqQLQSSIKQLEIRLCVTIQEANQLRTENthlekqtrelqakcn 320
Cdd:PTZ00121 1141 KAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAK--KAEAARKAEEVRKAEELRKAEDARKAE--------------- 1203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 321 elENERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDI-----EKMKETVSRFVQDATIRTKKEVANTK---KQCNI 392
Cdd:PTZ00121 1204 --AARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAkkaeeERNNEEIRKFEEARMAHFARRQAAIKaeeARKAD 1281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 393 QISRLTEELSALQMECAEKQGQIERVIK---EKKAVEEELEKIYREGRGNESDYRKLEEMHQRFLVSERSKDDLQLRLTR 469
Cdd:PTZ00121 1282 ELKKAEEKKKADEAKKAEEKKKADEAKKkaeEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEA 1361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 470 AENRIKQLETDSSEEISRYQEMIQKLQNVLESER-----ENCGLVSEQRLKLQQENK---QLRKETESLRKiALEAQKKA 541
Cdd:PTZ00121 1362 AEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEakkkaEEDKKKADELKKAAAAKKkadEAKKKAEEKKK-ADEAKKKA 1440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 542 KVKISTMEHEFSIKE-RGFEVQLREMEDSNRNSIVELRHLLATQQKAANRWKEETKKLTESAEIRINNLKSELSRQKLHT 620
Cdd:PTZ00121 1441 EEAKKADEAKKKAEEaKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEE 1520
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 153791839 621 QELLSQLEMANEKVAENEKLILEHQEKANRLQR--RLSQAEER 661
Cdd:PTZ00121 1521 AKKADEAKKAEEAKKADEAKKAEEKKKADELKKaeELKKAEEK 1563
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
415-534 |
7.72e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.54 E-value: 7.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 415 IERVIKEKKAVEEELEKIYREGRGNESD-----YRKLEEMHQRfLVSERSkdDLQLRLTRAENRIKQLETDSSE------ 483
Cdd:COG2433 382 LEELIEKELPEEEPEAEREKEHEERELTeeeeeIRRLEEQVER-LEAEVE--ELEAELEEKDERIERLERELSEarseer 458
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 153791839 484 -------EISRYQEMIQKLQNVLESEREncglvseqrlklqqENKQLRKETESLRKIA 534
Cdd:COG2433 459 reirkdrEISRLDREIERLERELEEERE--------------RIEELKRKLERLKELW 502
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
53-544 |
8.53e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.90 E-value: 8.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 53 QSFLAPLVTEYDKHLGELNGQLKYYQKQVGEMKLQLENVI-----KENERLHSELKDAVEKKLEAFPLGTEVGTDiyaDD 127
Cdd:pfam12128 418 QALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATatpelLLQLENFDERIERAREEQEAANAEVERLQS---EL 494
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 128 ETVRNLQEQLQLANQEKTQAVELWQTVSQELdrlhklyqEHMTEAQIHvfesqkqkdQLFDFQQLTKQLHVTNENMEVTN 207
Cdd:pfam12128 495 RQARKRRDQASEALRQASRRLEERQSALDEL--------ELQLFPQAG---------TLLHFLRKEAPDWEQSIGKVISP 557
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 208 QQFLKTVTEQSVIIEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQL 287
Cdd:pfam12128 558 ELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKA 637
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 288 EIRLCVTIQEANQLRTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEediekmket 367
Cdd:pfam12128 638 SREETFARTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQ--------- 708
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 368 vSRFVQDATIRTKKEVANTKKqcnIQISRLTEELSALQMECAEKQGQIERVIK-EKKAVEEELEKIYREGRGNESDYRKL 446
Cdd:pfam12128 709 -KREARTEKQAYWQVVEGALD---AQLALLKAAIAARRSGAKAELKALETWYKrDLASLGVDPDVIAKLKREIRTLERKI 784
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 447 EEMHQRFLVSERSKDDLQLRLTRAENRIKQLETDSSEEISRYQEMIQKLQNvlESERENCGLVSEqrlkLQQENKQLRKE 526
Cdd:pfam12128 785 ERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIA--DTKLRRAKLEME----RKASEKQQVRL 858
|
490
....*....|....*...
gi 153791839 527 TESLRKIALEAQKKAKVK 544
Cdd:pfam12128 859 SENLRGLRCEMSKLATLK 876
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
309-670 |
1.06e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.33 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 309 EKQTRELQAKCNELENERYE--AIVRARNSMQLLEEANLQKSQALLEE-KQKEEDIEKMKETVSRFVQD--ATIRTKKEV 383
Cdd:PRK02224 198 EKEEKDLHERLNGLESELAEldEEIERYEEQREQARETRDEADEVLEEhEERREELETLEAEIEDLRETiaETEREREEL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 384 ANTKKQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRgnesDYRKLEEMHQRFLVSERSK-DD 462
Cdd:PRK02224 278 AEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLE----ECRVAAQAHNEEAESLREDaDD 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 463 LQLRLTRAENRIKQLETD---SSEEISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETESLRKialeaqk 539
Cdd:PRK02224 354 LEERAEELREEAAELESEleeAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRE------- 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 540 kakvkistmehefsiKERGFEVQLREMedsnRNSIVELRHLLAtqqkaANRWKEETKKLTES--------AEIRINNLKS 611
Cdd:PRK02224 427 ---------------REAELEATLRTA----RERVEEAEALLE-----AGKCPECGQPVEGSphvetieeDRERVEELEA 482
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 153791839 612 ELSRQKLHTQELLSQLEMAnEKVAENEKLILEHQEKANRLQRRLSQAEERAASASQQLS 670
Cdd:PRK02224 483 ELEDLEEEVEEVEERLERA-EDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAE 540
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
393-659 |
1.23e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 393 QISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEkiyregrgnesDYRKLEEmhqrFLVSERSKDDLQLRLTRAEN 472
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAELDALQERRE-----------ALQRLAE----YSWDEIDVASAEREIAELEA 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 473 RIKQLETDSSeEISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETESLRKIALEAQKKAKVkistmEHEF 552
Cdd:COG4913 676 ELERLDASSD-DLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARL-----ELRA 749
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 553 SIKERGFEVQLREMEDsnrnsivELRHLLATQQKAANRwkeetkkLTESAEIRINNLKSE-LSRQKLHTQELLSQLEMAN 631
Cdd:COG4913 750 LLEERFAAALGDAVER-------ELRENLEERIDALRA-------RLNRAEEELERAMRAfNREWPAETADLDADLESLP 815
|
250 260 270
....*....|....*....|....*....|..
gi 153791839 632 EKVAENEKL----ILEHQEKANRLQRRLSQAE 659
Cdd:COG4913 816 EYLALLDRLeedgLPEYEERFKELLNENSIEF 847
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
344-525 |
1.39e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 42.35 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 344 NLQKSQALLEEKQK-EEDIEKMKETVSRFVQDAT--------IRTKKEVANTKKQCNIQISRLTEELSALQMECAEKQGQ 414
Cdd:TIGR01612 1491 HIDKSKGCKDEADKnAKAIEKNKELFEQYKKDVTellnkysaLAIKNKFAKTKKDSEIIIKEIKDAHKKFILEAEKSEQK 1570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 415 IERVIKEKKAVEEELEKIYREGRGNESDYRKLEEMHQRFL--VSERSKDDLQLRLTRA-ENRIKQLETDSSE-EISRYQE 490
Cdd:TIGR01612 1571 IKEIKKEKFRIEDDAAKNDKSNKAAIDIQLSLENFENKFLkiSDIKKKINDCLKETESiEKKISSFSIDSQDtELKENGD 1650
|
170 180 190
....*....|....*....|....*....|....*
gi 153791839 491 MIQKLQNVLESERENCGLVSEQRLKLQQENKQLRK 525
Cdd:TIGR01612 1651 NLNSLQEFLESLKDQKKNIEDKKKELDELDSEIEK 1685
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
321-679 |
1.46e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 321 ELENERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDIEKMKETVSRfVQDATIRTKKEvantkKQCNIQISRLTEE 400
Cdd:PRK04863 290 ELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNL-VQTALRQQEKI-----ERYQADLEELEER 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 401 LSALQMECAEKQGQIERVIKEKKAVEEELEKIyregRGNESDY-RKLEEMHQRFLVSERSKDDLQlrltraenRIKQLET 479
Cdd:PRK04863 364 LEEQNEVVEEADEQQEENEARAEAAEEEVDEL----KSQLADYqQALDVQQTRAIQYQQAVQALE--------RAKQLCG 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 480 DSSEEISRYQEMIQKLQNVlESERENCGLVSEQRLKLQQE-NKQLRKETESLRKIA-----LEAQKKAKVKISTMEHEFS 553
Cdd:PRK04863 432 LPDLTADNAEDWLEEFQAK-EQEATEELLSLEQKLSVAQAaHSQFEQAYQLVRKIAgevsrSEAWDVARELLRRLREQRH 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 554 IKER--GFEVQLREMEDSNRNSiVELRHLLATQQKAANR---WKEETKKLTESAEIRINNLKSELSRQKLHTQELLSQLE 628
Cdd:PRK04863 511 LAEQlqQLRMRLSELEQRLRQQ-QRAERLLAEFCKRLGKnldDEDELEQLQEELEARLESLSESVSEARERRMALRQQLE 589
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 153791839 629 MANEKVAENEKLI---LEHQEKANRLQRRLSQAEERAASASQQLSVITVQRRKA 679
Cdd:PRK04863 590 QLQARIQRLAARApawLAAQDALARLREQSGEEFEDSQDVTEYMQQLLEREREL 643
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
222-639 |
1.58e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.97 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 222 EQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVvsahgreeasdRRLQQLQSSIKQLEIRLCVTIQEANQL 301
Cdd:PRK03918 189 ENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEV-----------KELEELKEEIEELEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 302 RTENTHLEKQTRELQAKCNELENeryeaIVRARNSMQLLEEANLQKSQALLEEKQKEEDIEKMKETVSRfvQDATIRTKK 381
Cdd:PRK03918 258 EEKIRELEERIEELKKEIEELEE-----KVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEE--EINGIEERI 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 382 EVANTKKQcniQISRLTEELSALQMECAEKQGQiERVIKEKKAVEEELEKIYREGRGNESD--YRKLEEMHQRFLVSERS 459
Cdd:PRK03918 331 KELEEKEE---RLEELKKKLKELEKRLEELEER-HELYEEAKAKKEELERLKKRLTGLTPEklEKELEELEKAKEEIEEE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 460 KDDLQLRLTRAENRIKQLETDSSEEISRYQEMIQKLQNVLESERENcgLVSEQRLKLQQENKQLRKETESLRKIALEaqk 539
Cdd:PRK03918 407 ISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKE--LLEEYTAELKRIEKELKEIEEKERKLRKE--- 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 540 KAKVKISTMEHEFSIKERGFEVQLREMEDsnrnsivELRHLLATQQKAANRWKEETKKLTESAEIRINNLKSELSRQKlh 619
Cdd:PRK03918 482 LRELEKVLKKESELIKLKELAEQLKELEE-------KLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE-- 552
|
410 420
....*....|....*....|
gi 153791839 620 tqELLSQLEMANEKVAENEK 639
Cdd:PRK03918 553 --ELKKKLAELEKKLDELEE 570
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
593-685 |
2.00e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 41.48 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 593 EETKKLTESAEIRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQAEERAASASQQLSVI 672
Cdd:PRK11448 138 EDPENLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQLEQLQEKAAETSQERKQK 217
|
90
....*....|....
gi 153791839 673 TVQR-RKAASLMNL 685
Cdd:PRK11448 218 RKEItDQAAKRLEL 231
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
69-370 |
2.00e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.59 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 69 ELNGQLKYYQKQVGEMKLQLENVIKENER-------LHSELKDAVEKKLEAFPLGTEVGTDIYADDETVRNLQEQLQLAN 141
Cdd:TIGR02169 671 SEPAELQRLRERLEGLKRELSSLQSELRRienrldeLSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE 750
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 142 QEKTQAVELWQTVSQELDRLhklyqehmtEAQIHvfesqKQKDQLFDFQQLTKQLHVTNENMEVTNQQflKTVTEQSVII 221
Cdd:TIGR02169 751 QEIENVKSELKELEARIEEL---------EEDLH-----KLEEALNDLEARLSHSRIPEIQAELSKLE--EEVSRIEARL 814
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 222 EQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLEIRLcvtiqeaNQL 301
Cdd:TIGR02169 815 REIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRL-------GDL 887
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 153791839 302 RTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQ------ALLEEKQKEEDIEKMKETVSR 370
Cdd:TIGR02169 888 KKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEiedpkgEDEEIPEEELSLEDVQAELQR 962
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
243-504 |
2.18e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.43 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 243 EELTNVT-EDLQGQMKKKEKDV-------VSAHGREEASDRRLQQLQSSIKQLEIRLCVTIQEANQLRTENTHLEKQTre 314
Cdd:PLN02939 123 EQLSDFQlEDLVGMIQNAEKNIlllnqarLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILE-- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 315 lqakcNELENERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDIEKMKETVSRFVQdatirTKKEVANTKKQCNIQI 394
Cdd:PLN02939 201 -----EQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAE-----TEERVFKLEKERSLLD 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 395 SRLTE-------------ELSALQMECA-EKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKLEEMHQRFLVSERSK 460
Cdd:PLN02939 271 ASLREleskfivaqedvsKLSPLQYDCWwEKVENLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEANVSKFSS 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 153791839 461 ---DDLQLRLTRAENRIKQLETDSSEEISRYQEMIQKLQNVLESERE 504
Cdd:PLN02939 351 ykvELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKE 397
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
412-682 |
2.38e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.46 E-value: 2.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 412 QGQIERVI--------------------KEKK--------AVEEELEK---IYREGRGN-ES---------DYRKLEEMH 450
Cdd:COG1196 143 QGMIDRIIeakpeerraiieeaagiskyKERKeeaerkleATEENLERledILGELERQlEPlerqaekaeRYRELKEEL 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 451 QRFLVSERSK--DDLQLRLTRAENRIKQLETDSSEEISRYQEmiqklqnvLESEREncglvsEQRLKLQQENKQLRKETE 528
Cdd:COG1196 223 KELEAELLLLklRELEAELEELEAELEELEAELEELEAELAE--------LEAELE------ELRLELEELELELEEAQA 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 529 SLRKIALEAQKKAKVKISTMEhefsiKERGFEVQLREMEDSNRNSIVELRHLLATQQKAANRWKEETKKLtESAEIRINN 608
Cdd:COG1196 289 EEYELLAELARLEQDIARLEE-----RRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEEL-EEAEAELAE 362
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 153791839 609 LKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQAEERAASASQQLSVITVQRRKAASL 682
Cdd:COG1196 363 AEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEE 436
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
580-669 |
2.44e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 2.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 580 LLATQQKAANRWKEETKKLTESAEIRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQAE 659
Cdd:COG4942 10 LLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELE 89
|
90
....*....|
gi 153791839 660 ERAASASQQL 669
Cdd:COG4942 90 KEIAELRAEL 99
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
226-618 |
3.47e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.82 E-value: 3.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 226 KKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDvvsahgREEASDRRLQQLQSSIKQLEIRLCVTIQEANQLRTEN 305
Cdd:PRK03918 341 EELKKKLKELEKRLEELEERHELYEEAKAKKEELERL------KKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARI 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 306 THLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQALLE--EKQKEEDIEKMKETVSRFVQDATIRTKKEV 383
Cdd:PRK03918 415 GELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKriEKELKEIEEKERKLRKELRELEKVLKKESE 494
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 384 ANTKKQCNIQISRLTEELSALQMEcaekqgQIERVIKEKKAVEEELEKIYREGRGNESDYRKLEEMHQRFLVSERSKDDL 463
Cdd:PRK03918 495 LIKLKELAEQLKELEEKLKKYNLE------ELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDEL 568
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 464 QLRLTRAENRIKQLETDSSEEI-SRYQEM----------------IQKLQNVLESERENCGLVSEQRLKLQQENKQLRKE 526
Cdd:PRK03918 569 EEELAELLKELEELGFESVEELeERLKELepfyneylelkdaekeLEREEKELKKLEEELDKAFEELAETEKRLEELRKE 648
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 527 TESLRKI-ALEAQKKAKVKISTMEHEFSIKERGFEvQLREMEDSNRNSIVELRHLLATQQKAANRWKEETKKLTESAEIR 605
Cdd:PRK03918 649 LEELEKKySEEEYEELREEYLELSRELAGLRAELE-ELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELR 727
|
410
....*....|....*
gi 153791839 606 --INNLKSELSRQKL 618
Cdd:PRK03918 728 ekVKKYKALLKERAL 742
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
277-679 |
3.66e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 40.59 E-value: 3.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 277 LQQLQSSIKQLEIRLCvtiqeanQLRTENTHLEKQTRELQAKCNELENERYEAIVRARNSM-QLLEEANLQKSQALLEEK 355
Cdd:pfam12128 246 LQQEFNTLESAELRLS-------HLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWkEKRDELNGELSAADAAVA 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 356 QKEEDIEKMKETVSRFvQDATIRTKKEVANTKKQCNIQISRLTEELSALQmecaEKQGQIERVIKEKKAVEEELEKiyRE 435
Cdd:pfam12128 319 KDRSELEALEDQHGAF-LDADIETAAADQEQLPSWQSELENLEERLKALT----GKHQDVTAKYNRRRSKIKEQNN--RD 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 436 GRGNESDYRKLEEMHQRFLVSERskDDLQLRLTRAENRIKQLETDSSEEISRYQEMIQKLQNVLESerencgLVSEQRLK 515
Cdd:pfam12128 392 IAGIKDKLAKIREARDRQLAVAE--DDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQ------ATATPELL 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 516 LQQENKQLRKETeslrkiALEAQKKAKVKISTMEHEFSIKERGFEVQLREMEDSN------RNSIVELRH--------LL 581
Cdd:pfam12128 464 LQLENFDERIER------AREEQEAANAEVERLQSELRQARKRRDQASEALRQASrrleerQSALDELELqlfpqagtLL 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 582 ATQQKAANRWKEETKKLTESAEIRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQ--EKANRLQRRLSQAE 659
Cdd:pfam12128 538 HFLRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRIDVPEWAASEEElrERLDKAEEALQSAR 617
|
410 420
....*....|....*....|
gi 153791839 660 ERAASASQQLSVITVQRRKA 679
Cdd:pfam12128 618 EKQAAAEEQLVQANGELEKA 637
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
87-288 |
5.25e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 5.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 87 QLENVIKENERLHSELKDAVEKKLEAFPLGTEVGTDIYADDETVRNLQEQLQLANQEKTQAVELWQTVSQELDRLHKLYQ 166
Cdd:COG4942 28 ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 167 EHMTEAQIHvfeSQKQKDQLF----DFQQLTKQLHVTNENMEVTNQQfLKTVTEQSVIIEQLRKKLRQAKLELRVAVAKV 242
Cdd:COG4942 108 ELLRALYRL---GRQPPLALLlspeDFLDAVRRLQYLKYLAPARREQ-AEELRADLAELAALRAELEAERAELEALLAEL 183
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 153791839 243 EELTnvtEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLE 288
Cdd:COG4942 184 EEER---AALEALKAERQKLLARLEKELAELAAELAELQQEAEELE 226
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
221-660 |
5.56e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.00 E-value: 5.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 221 IEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLEIRLCVTIQeaNQ 300
Cdd:TIGR04523 234 IEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWN--KE 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 301 LRTENTHLEKQTRELQ---AKCNELENERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDIEKMKEtvsrfvqdati 377
Cdd:TIGR04523 312 LKSELKNQEKKLEEIQnqiSQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQ----------- 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 378 rtkkEVANTKKQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKLEEmhqrflvse 457
Cdd:TIGR04523 381 ----SYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTN--------- 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 458 rSKDDLQLRLTRAENRIKQLETdsseEISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETESLRK---IA 534
Cdd:TIGR04523 448 -QDSVKELIIKNLDNTRESLET----QLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKkisSL 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 535 LEAQKKAKVKISTMEHEFSIKERGFE--------VQLREMEDSNRNSIVELRHllatQQKAANRWKEETKKLTESAEIRI 606
Cdd:TIGR04523 523 KEKIEKLESEKKEKESKISDLEDELNkddfelkkENLEKEIDEKNKEIEELKQ----TQKSLKKKQEEKQELIDQKEKEK 598
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 153791839 607 NNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQAEE 660
Cdd:TIGR04523 599 KDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKE 652
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
393-639 |
6.70e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.36 E-value: 6.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 393 QISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYRegrgnesdyrKLEEMHQRFLVSERSKDDLQLRLTRAEN 472
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALER----------RIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 473 RIKQLETDSSEEISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETESLRKIAlEAQKKAKVKIStmehef 552
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQA-EELRADLAELA------ 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153791839 553 sikergfevQLREMEDSNRNSIVELRHLLATQQKAANRWKEETKKLTESAEIRINNLKSELSRQKLHTQELLSQLEMANE 632
Cdd:COG4942 164 ---------ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
....*..
gi 153791839 633 KVAENEK 639
Cdd:COG4942 235 EAAAAAE 241
|
|
| CYP51-like |
cd11042 |
cytochrome P450 family 51 and similar cytochrome P450s; This family is composed of cytochrome ... |
56-100 |
7.81e-03 |
|
cytochrome P450 family 51 and similar cytochrome P450s; This family is composed of cytochrome P450 51 (CYP51 or sterol 14alpha-demethylase) and related cytochrome P450s. CYP51 is the only cytochrome P450 enzyme with a conserved function across animals, fungi, and plants, in the synthesis of essential sterols. In mammals, it is expressed in many different tissues, with highest expression in testis, ovary, adrenal gland, prostate, liver, kidney, and lung. In fungi, CYP51 is a significant drug target for treatment of human protozoan infections. In plants, it functions within a specialized defense-related metabolic pathway. CYP51 is also found in several bacterial species. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Pssm-ID: 410668 [Multi-domain] Cd Length: 416 Bit Score: 39.12 E-value: 7.81e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 153791839 56 LAPLVTEYDKHLGELNGQLKYyqKQVGEMKLqLENVIKENERLHS 100
Cdd:cd11042 246 LEALREEQKEVLGDGDDPLTY--DVLKEMPL-LHACIKETLRLHP 287
|
|
| |
