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Conserved domains on  [gi|63175654|ref|NP_659496|]
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L-fucose kinase [Homo sapiens]

Protein Classification

fkp and Fucokinase domain-containing protein( domain architecture ID 13490766)

fkp and Fucokinase domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Fucokinase pfam07959
L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated ...
91-496 2.32e-134

L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated by L-fucokinase to form L-fucose-L-phosphate, which is then further converted to GDP-L-fucose in the reaction catalyzed by GDP-L-fucose pyrophosphorylase.


:

Pssm-ID: 462323  Cd Length: 405  Bit Score: 412.43  E-value: 2.32e-134
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654     91 LILHMGRDFPFDDCGRAFTCLPVENPEAPVEALvcnLDCLLDIMTYRLGpGSPPGVWVCSTDMLLSVPANpGISWDSFrG 170
Cdd:pfam07959    1 AGGYSQRLPSASALGKIFTALPLEDPGGPVYQL---LDLKLAIYSDFPS-RMKPGVLVCSTDVILLFDAN-EISFDKP-G 74
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    171 ARVIALPGSPAYAQNHGVYLTDPQ---------GLVLDIYYQGTEAEIQR--CVRPDGRVPLVSGVVFFSVETAERLLAT 239
Cdd:pfam07959   75 VTALAHPSSLAIGTNHGVFVLDPQgssekdleiGLCRDFLHKPSEEELQAsgAVLKDGFVYLDSGIVFFDGKTAEKLLAL 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    240 HVSP-PLDACTYLGldsgarPVQLSLFFDILHCMAENVTREDFLvgRPPELGQGDADvagyLQSARAQLWRELRDQPLTM 318
Cdd:pfam07959  155 YVSPgPLDCETYLG------PLQIDLYGDFLQALGPGATLEYFL--NTANVGKEEAS----LRPAREELWKLLRGTPLNV 222
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    319 AYVSSGSYSYMTSSAsEFLLSLTLPGAPGAQ-----IVHSQVEEQQLLAAGSSVVSCLLEGPVQLGPGSVLQHCHLQGPI 393
Cdd:pfam07959  223 ICLPNSKFYHFGTTA-EYLEHLTGDCSLRVElgltsTAFSVIANARQLKAGASVINSVLEPGVSVGPGSVIEYCHLGGPV 301
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    394 HIGAGCLVTGLDTAHSKAlhGRELR-DLVLQGHHTRLHGSPGHAFTLVGRLDSWERQ---GAGTYLNVPWSEFFKRTGVR 469
Cdd:pfam07959  302 SIGSGCILSGLDLSSSLA--RLELPdDTFLHTLPLKLGGGKLYVTVVFGIHDNLKSSvsdGNLTFLGKPLEDFLSLTGIQ 379
                          410       420
                   ....*....|....*....|....*..
gi 63175654    470 AWDLWDPETlPAEYCLPSARLFPVLHP 496
Cdd:pfam07959  380 PEDLWFSGE-PREKSLWNARLFPVCHD 405
fkp super family cl36248
bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
45-1047 2.13e-64

bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional


The actual alignment was detected with superfamily member PRK13412:

Pssm-ID: 237379 [Multi-domain]  Cd Length: 974  Bit Score: 236.65  E-value: 2.13e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    45 LAVEDP-EKRVGSGGATlnALLVAAEHLSARAGFTVvtSDVLHSAWILILHMG---RDFP-FDDCGRAFTCLPVENPEAP 119
Cdd:PRK13412   52 FCTSDPvGQKLGSGGGT--TWLLEACFRNGSPGGDF--TEWLGKEKRILLHAGgqsRRLPgYAPSGKILTPVPVFRWERG 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   120 vEALVCNLDCLLDIMTYRLGPGSPPGV--WVCSTDMLLSVPAnPGISWdSFRGARVIALPGSPAYAQNHGVYLTDPQGL- 196
Cdd:PRK13412  128 -QRLSQNLLSLQLPLYERIMSKAPEGLhtLIASGDVYIRSEQ-PLQDI-PEADVVCYGLWVDPSLATNHGVFVSSRKSPe 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   197 VLDIYYQGTEAEIQRCVRPDGRVPLVSGVVFFSVETAERLLATHvsppldactylGLDSGARPVQLSLFFDILHCMAENV 276
Cdd:PRK13412  205 RLDFMLQKPSLEELGGLSKTHLFLMDIGIWLLSDRAVELLMKRS-----------GKEDGGKLKYYDLYSDFGLALGTHP 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   277 TREDflvgrppelgqgdadvagylqsaraqlwRELRDQPLTMAYVSSGS-YSYMTSSAsefLLSLTLP----GAPGAQIV 351
Cdd:PRK13412  274 RIGD----------------------------DELNALSVAILPLPGGEfYHYGTSRE---LISSTLAvqnlVTDQRRIM 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   352 HSQVEEQQLLAAGSSVVSclleGPVQLGPGSV-LQHCHLQGPIHIGAGCLVTGLDTAHSK-ALHGRELRDLVLQGHHtrl 429
Cdd:PRK13412  323 HRKVKPHPAMFVQNAVLS----GKLTAENATLwIENSHVGEGWKLASRSIITGVPENSWNlDLPEGVCIDVVPVGDR--- 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   430 hgspGHAFTLVGRLDSW---ERQGAGTYLNVPWSEFFKRTGVrAWdlwdPETLPAEYCLPSARLFPVLHPSRELGPQdLL 506
Cdd:PRK13412  396 ----GFVARPYGLDDVFkgaLADGKTTWFGRPFLEWMEARGL-SW----PDLKGRTDDLQAAHLFPVVTSVEELGAV-LR 465
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   507 WMLdHQEDGGEALRAWRASWRLSWEQLQPCLDRAATLASRrdlffrqalhkarhvlEARqdlslRPLIWAAVREGCPGPL 586
Cdd:PRK13412  466 WML-SEPSLEEGKEIWLRSEKLSADEISAYANLARLYAQR----------------EAF-----RKANWRALAANHEKSV 523
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   587 LATLDQVAAGA-------GDPGVAARALACVADVLGCMAEGRGGLRSGPAANPEWMRPFSYLECGdLAAGVEALAQErdk 659
Cdd:PRK13412  524 FYQLDLADAAEdfvrlllDMPEILPEDAPLMLRIHNRMFRARILKLSGARYREEEQAAFRLLRDG-LLDGAYPRKQT--- 599
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   660 wlsrPALLVRAarhyegagqilirqavmsaqhfvsteqvelpgpGQWVVAECPARVDFSGGWSDTPPLAYELGGAVLGLA 739
Cdd:PRK13412  600 ----PKLEVYS---------------------------------DQIVWGRSPVRIDLAGGWTDTPPYCLYSGGNVVNLA 642
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   740 VRVDGRRPIGARARRIPEPELWLavgpRQDEMTVKIVCRCLADLRDYCQPHAPGALLKAAFICAGIV---HVHSELQLSE 816
Cdd:PRK13412  643 IELNGQPPLQVYVKPCSEPHIVL----RSIDLGAMEVVRTNEELRDYKKVGSPFSIPKAALCLAGFAprfSAESYASLEE 718
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   817 QLLRtFGGGFELHTWSELPHGSGLGTSSILAGTALAALQRAAGRVVGTEALIHAVLHLEQVLTTGGGWQDQVGGLMPGIK 896
Cdd:PRK13412  719 QLKA-FGSGIEITLLAAIPAGSGLGTSSILAATVLGAISDFCGLAWDKNEICNRTLVLEQLLTTGGGWQDQYGGVLPGVK 797
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   897 V---GRSRAQLPLkveveevtvpegfVQKLNDHL----------LLVYTGKTRLARNLLQDVLRSWYARLPAVVQNAHSL 963
Cdd:PRK13412  798 LlqtGAGFAQSPL-------------VRWLPDSLftqpeyrdchLLYYTGITRTAKGILAEIVRSMFLNSTAHLQLLHEM 864
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   964 VRQTEECAEGFRQGSLPLLGQCLTSYWEQKKLMAPGCEPLTVRRMMDVLAPHVHGQSLAGAGGGGFLYLLTKEPQQKEAL 1043
Cdd:PRK13412  865 KAHALDMYEAIQRGEFEEFGRLVGKTWEQNKALDSGTNPAAVEAIIELIKDYTLGYKLPGAGGGGYLYMVAKDPGAAERI 944

                  ....
gi 63175654  1044 EAVL 1047
Cdd:PRK13412  945 RKIL 948
 
Name Accession Description Interval E-value
Fucokinase pfam07959
L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated ...
91-496 2.32e-134

L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated by L-fucokinase to form L-fucose-L-phosphate, which is then further converted to GDP-L-fucose in the reaction catalyzed by GDP-L-fucose pyrophosphorylase.


Pssm-ID: 462323  Cd Length: 405  Bit Score: 412.43  E-value: 2.32e-134
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654     91 LILHMGRDFPFDDCGRAFTCLPVENPEAPVEALvcnLDCLLDIMTYRLGpGSPPGVWVCSTDMLLSVPANpGISWDSFrG 170
Cdd:pfam07959    1 AGGYSQRLPSASALGKIFTALPLEDPGGPVYQL---LDLKLAIYSDFPS-RMKPGVLVCSTDVILLFDAN-EISFDKP-G 74
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    171 ARVIALPGSPAYAQNHGVYLTDPQ---------GLVLDIYYQGTEAEIQR--CVRPDGRVPLVSGVVFFSVETAERLLAT 239
Cdd:pfam07959   75 VTALAHPSSLAIGTNHGVFVLDPQgssekdleiGLCRDFLHKPSEEELQAsgAVLKDGFVYLDSGIVFFDGKTAEKLLAL 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    240 HVSP-PLDACTYLGldsgarPVQLSLFFDILHCMAENVTREDFLvgRPPELGQGDADvagyLQSARAQLWRELRDQPLTM 318
Cdd:pfam07959  155 YVSPgPLDCETYLG------PLQIDLYGDFLQALGPGATLEYFL--NTANVGKEEAS----LRPAREELWKLLRGTPLNV 222
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    319 AYVSSGSYSYMTSSAsEFLLSLTLPGAPGAQ-----IVHSQVEEQQLLAAGSSVVSCLLEGPVQLGPGSVLQHCHLQGPI 393
Cdd:pfam07959  223 ICLPNSKFYHFGTTA-EYLEHLTGDCSLRVElgltsTAFSVIANARQLKAGASVINSVLEPGVSVGPGSVIEYCHLGGPV 301
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    394 HIGAGCLVTGLDTAHSKAlhGRELR-DLVLQGHHTRLHGSPGHAFTLVGRLDSWERQ---GAGTYLNVPWSEFFKRTGVR 469
Cdd:pfam07959  302 SIGSGCILSGLDLSSSLA--RLELPdDTFLHTLPLKLGGGKLYVTVVFGIHDNLKSSvsdGNLTFLGKPLEDFLSLTGIQ 379
                          410       420
                   ....*....|....*....|....*..
gi 63175654    470 AWDLWDPETlPAEYCLPSARLFPVLHP 496
Cdd:pfam07959  380 PEDLWFSGE-PREKSLWNARLFPVCHD 405
fkp PRK13412
bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
45-1047 2.13e-64

bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional


Pssm-ID: 237379 [Multi-domain]  Cd Length: 974  Bit Score: 236.65  E-value: 2.13e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    45 LAVEDP-EKRVGSGGATlnALLVAAEHLSARAGFTVvtSDVLHSAWILILHMG---RDFP-FDDCGRAFTCLPVENPEAP 119
Cdd:PRK13412   52 FCTSDPvGQKLGSGGGT--TWLLEACFRNGSPGGDF--TEWLGKEKRILLHAGgqsRRLPgYAPSGKILTPVPVFRWERG 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   120 vEALVCNLDCLLDIMTYRLGPGSPPGV--WVCSTDMLLSVPAnPGISWdSFRGARVIALPGSPAYAQNHGVYLTDPQGL- 196
Cdd:PRK13412  128 -QRLSQNLLSLQLPLYERIMSKAPEGLhtLIASGDVYIRSEQ-PLQDI-PEADVVCYGLWVDPSLATNHGVFVSSRKSPe 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   197 VLDIYYQGTEAEIQRCVRPDGRVPLVSGVVFFSVETAERLLATHvsppldactylGLDSGARPVQLSLFFDILHCMAENV 276
Cdd:PRK13412  205 RLDFMLQKPSLEELGGLSKTHLFLMDIGIWLLSDRAVELLMKRS-----------GKEDGGKLKYYDLYSDFGLALGTHP 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   277 TREDflvgrppelgqgdadvagylqsaraqlwRELRDQPLTMAYVSSGS-YSYMTSSAsefLLSLTLP----GAPGAQIV 351
Cdd:PRK13412  274 RIGD----------------------------DELNALSVAILPLPGGEfYHYGTSRE---LISSTLAvqnlVTDQRRIM 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   352 HSQVEEQQLLAAGSSVVSclleGPVQLGPGSV-LQHCHLQGPIHIGAGCLVTGLDTAHSK-ALHGRELRDLVLQGHHtrl 429
Cdd:PRK13412  323 HRKVKPHPAMFVQNAVLS----GKLTAENATLwIENSHVGEGWKLASRSIITGVPENSWNlDLPEGVCIDVVPVGDR--- 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   430 hgspGHAFTLVGRLDSW---ERQGAGTYLNVPWSEFFKRTGVrAWdlwdPETLPAEYCLPSARLFPVLHPSRELGPQdLL 506
Cdd:PRK13412  396 ----GFVARPYGLDDVFkgaLADGKTTWFGRPFLEWMEARGL-SW----PDLKGRTDDLQAAHLFPVVTSVEELGAV-LR 465
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   507 WMLdHQEDGGEALRAWRASWRLSWEQLQPCLDRAATLASRrdlffrqalhkarhvlEARqdlslRPLIWAAVREGCPGPL 586
Cdd:PRK13412  466 WML-SEPSLEEGKEIWLRSEKLSADEISAYANLARLYAQR----------------EAF-----RKANWRALAANHEKSV 523
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   587 LATLDQVAAGA-------GDPGVAARALACVADVLGCMAEGRGGLRSGPAANPEWMRPFSYLECGdLAAGVEALAQErdk 659
Cdd:PRK13412  524 FYQLDLADAAEdfvrlllDMPEILPEDAPLMLRIHNRMFRARILKLSGARYREEEQAAFRLLRDG-LLDGAYPRKQT--- 599
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   660 wlsrPALLVRAarhyegagqilirqavmsaqhfvsteqvelpgpGQWVVAECPARVDFSGGWSDTPPLAYELGGAVLGLA 739
Cdd:PRK13412  600 ----PKLEVYS---------------------------------DQIVWGRSPVRIDLAGGWTDTPPYCLYSGGNVVNLA 642
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   740 VRVDGRRPIGARARRIPEPELWLavgpRQDEMTVKIVCRCLADLRDYCQPHAPGALLKAAFICAGIV---HVHSELQLSE 816
Cdd:PRK13412  643 IELNGQPPLQVYVKPCSEPHIVL----RSIDLGAMEVVRTNEELRDYKKVGSPFSIPKAALCLAGFAprfSAESYASLEE 718
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   817 QLLRtFGGGFELHTWSELPHGSGLGTSSILAGTALAALQRAAGRVVGTEALIHAVLHLEQVLTTGGGWQDQVGGLMPGIK 896
Cdd:PRK13412  719 QLKA-FGSGIEITLLAAIPAGSGLGTSSILAATVLGAISDFCGLAWDKNEICNRTLVLEQLLTTGGGWQDQYGGVLPGVK 797
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   897 V---GRSRAQLPLkveveevtvpegfVQKLNDHL----------LLVYTGKTRLARNLLQDVLRSWYARLPAVVQNAHSL 963
Cdd:PRK13412  798 LlqtGAGFAQSPL-------------VRWLPDSLftqpeyrdchLLYYTGITRTAKGILAEIVRSMFLNSTAHLQLLHEM 864
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   964 VRQTEECAEGFRQGSLPLLGQCLTSYWEQKKLMAPGCEPLTVRRMMDVLAPHVHGQSLAGAGGGGFLYLLTKEPQQKEAL 1043
Cdd:PRK13412  865 KAHALDMYEAIQRGEFEEFGRLVGKTWEQNKALDSGTNPAAVEAIIELIKDYTLGYKLPGAGGGGYLYMVAKDPGAAERI 944

                  ....
gi 63175654  1044 EAVL 1047
Cdd:PRK13412  945 RKIL 948
COG2605 COG2605
Predicted kinase related to galactokinase and mevalonate kinase [General function prediction ...
707-999 1.39e-38

Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only];


Pssm-ID: 442017 [Multi-domain]  Cd Length: 328  Bit Score: 146.86  E-value: 1.39e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  707 VVAECPARVDFSGGWSDTPPLAYELGGAVLGLAvrvdgrrpIGARARripepelwLAVGPRQDEmtvKIVCRClADLRDY 786
Cdd:COG2605    1 IISRAPLRISFAGGGTDLPPYYLEHGGAVLNAA--------IDKYAY--------VTLEPRFDG---KIRLSS-SDTERV 60
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  787 CQPHAPGALLKAAFicagivhvhselqlsEQLLRTFG--GGFELHTWSELPHGSGLGTSSILAGTALAALQRAAGRVVGT 864
Cdd:COG2605   61 ETVDEDDDIPHPVI---------------REALKLFGigDGLEITTDSDAPAGSGLGSSSALTVALLNALHALLGLPLSP 125
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  865 EALIHAVLHLEQ-VLTTGGGWQDQVGGLMPGIKVGRSRAQ-------LPLKveveevtvpEGFVQKLNDHLLLVYTGKTR 936
Cdd:COG2605  126 YDLARLAYEIERnDLGEPGGKQDQYAAAFGGFNFIEFGPDgrvivnpLRIS---------PEILNELESNLLLFYTGITR 196
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 63175654  937 LARNLLQDVLRSWYARLPAVVQNAHSLVRQTEECAEGFRQGSLPLLGQCLTSYWEQKKLMAPG 999
Cdd:COG2605  197 ESSDILKEQVKNVEDGDEATLEALHEMKELALEMKEALLKGDLDEFGELLNEGWELKKRLASG 259
PksD COG3321
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
163-716 3.43e-05

Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442550 [Multi-domain]  Cd Length: 1386  Bit Score: 48.33  E-value: 3.43e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  163 ISWDSF---RGARVIALPGSPAYAQNHGVYLTDPqglvldiyyqgteaeiqrcVRPDGRVPLVSGVVFFSVETAERLLAT 239
Cdd:COG3321  847 VDWSALypgRGRRRVPLPTYPFQREDAAAALLAA-------------------ALAAALAAAAALGALLLAALAAALAAA 907
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  240 HVSPPLDACTYLGLDSGARPVQLSLFFDILHCMAENVTREDFLVGRPPELGQGDADVAGYLQSARAQLWRELRDQPLTMA 319
Cdd:COG3321  908 LLALAAAAAAALALAAAALAALLALVALAAAAAALLALAAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAA 987
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  320 YVSSGSYSYMTSSASEFLLSLTLPGAPGAQIVHSQVEEQQLLAAGSSVVSCLLEGPVQLGPGSVLQHCHLQGPIHIGAG- 398
Cdd:COG3321  988 AAAAAAAALAAAAALALLAAAALLLAAAAAAAALLALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAa 1067
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  399 -CLVTGLDTAHSKALHGRELRDLVLQGHHTRLHGSPGHAFTLVGRLDSWERQGAGTYLNVPWSEFFKRTGVRAWDLWDPE 477
Cdd:COG3321 1068 lLLLAALAELALAAAALALAAALAAAALALALAALAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAA 1147
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  478 TLPAEYCLPSARLFPVLHPSRELGPQDLLWMLDHQEDGGEALRAWRASWRLSWEQLQPCLDRAATLASRRDLFFRQALHK 557
Cdd:COG3321 1148 AALALAAAAAALAAALAAALLAAAALLLALALALAAALAAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAA 1227
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  558 ARHVLEARQDLSLRPLIWAAVREGCPGPLLATLDQVAAGAGDPGVAARALACVADVLGCMAEGRGGLRSGPAANPEWMRP 637
Cdd:COG3321 1228 AAAAALALLALAAAAAAVAALAAAAAALLAALAALALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAA 1307
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 63175654  638 FSYLECGDLAAGVEALAQERDKWLSRPALLVRAARHYEGAGQILIRQAVMSAQHFVSTEQVELPGPGQWVVAECPARVD 716
Cdd:COG3321 1308 AAAAAAAAAAAAALAAALLAAALAALAAAVAAALALAAAAAAAAAAAAAAAAAAALAAAAGAAAAAAALALAALAAAVA 1386
GHMP_kinases_N pfam00288
GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and ...
827-894 1.89e-04

GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and mevalonate kinases.


Pssm-ID: 395225 [Multi-domain]  Cd Length: 64  Bit Score: 40.61  E-value: 1.89e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 63175654    827 ELHTWSELPHGSGLGTSSILAGTALAALQRAAGRvvgteALIHAVLHLEQVLTTG-GGWQDQVGGLMPG 894
Cdd:pfam00288    1 DIEIESNIPLGAGLGSSAALAVALLLALNELFGL-----PLAKLALEAEELAGGGrGGGMDVAASLYGG 64
 
Name Accession Description Interval E-value
Fucokinase pfam07959
L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated ...
91-496 2.32e-134

L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated by L-fucokinase to form L-fucose-L-phosphate, which is then further converted to GDP-L-fucose in the reaction catalyzed by GDP-L-fucose pyrophosphorylase.


Pssm-ID: 462323  Cd Length: 405  Bit Score: 412.43  E-value: 2.32e-134
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654     91 LILHMGRDFPFDDCGRAFTCLPVENPEAPVEALvcnLDCLLDIMTYRLGpGSPPGVWVCSTDMLLSVPANpGISWDSFrG 170
Cdd:pfam07959    1 AGGYSQRLPSASALGKIFTALPLEDPGGPVYQL---LDLKLAIYSDFPS-RMKPGVLVCSTDVILLFDAN-EISFDKP-G 74
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    171 ARVIALPGSPAYAQNHGVYLTDPQ---------GLVLDIYYQGTEAEIQR--CVRPDGRVPLVSGVVFFSVETAERLLAT 239
Cdd:pfam07959   75 VTALAHPSSLAIGTNHGVFVLDPQgssekdleiGLCRDFLHKPSEEELQAsgAVLKDGFVYLDSGIVFFDGKTAEKLLAL 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    240 HVSP-PLDACTYLGldsgarPVQLSLFFDILHCMAENVTREDFLvgRPPELGQGDADvagyLQSARAQLWRELRDQPLTM 318
Cdd:pfam07959  155 YVSPgPLDCETYLG------PLQIDLYGDFLQALGPGATLEYFL--NTANVGKEEAS----LRPAREELWKLLRGTPLNV 222
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    319 AYVSSGSYSYMTSSAsEFLLSLTLPGAPGAQ-----IVHSQVEEQQLLAAGSSVVSCLLEGPVQLGPGSVLQHCHLQGPI 393
Cdd:pfam07959  223 ICLPNSKFYHFGTTA-EYLEHLTGDCSLRVElgltsTAFSVIANARQLKAGASVINSVLEPGVSVGPGSVIEYCHLGGPV 301
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    394 HIGAGCLVTGLDTAHSKAlhGRELR-DLVLQGHHTRLHGSPGHAFTLVGRLDSWERQ---GAGTYLNVPWSEFFKRTGVR 469
Cdd:pfam07959  302 SIGSGCILSGLDLSSSLA--RLELPdDTFLHTLPLKLGGGKLYVTVVFGIHDNLKSSvsdGNLTFLGKPLEDFLSLTGIQ 379
                          410       420
                   ....*....|....*....|....*..
gi 63175654    470 AWDLWDPETlPAEYCLPSARLFPVLHP 496
Cdd:pfam07959  380 PEDLWFSGE-PREKSLWNARLFPVCHD 405
fkp PRK13412
bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
45-1047 2.13e-64

bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional


Pssm-ID: 237379 [Multi-domain]  Cd Length: 974  Bit Score: 236.65  E-value: 2.13e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654    45 LAVEDP-EKRVGSGGATlnALLVAAEHLSARAGFTVvtSDVLHSAWILILHMG---RDFP-FDDCGRAFTCLPVENPEAP 119
Cdd:PRK13412   52 FCTSDPvGQKLGSGGGT--TWLLEACFRNGSPGGDF--TEWLGKEKRILLHAGgqsRRLPgYAPSGKILTPVPVFRWERG 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   120 vEALVCNLDCLLDIMTYRLGPGSPPGV--WVCSTDMLLSVPAnPGISWdSFRGARVIALPGSPAYAQNHGVYLTDPQGL- 196
Cdd:PRK13412  128 -QRLSQNLLSLQLPLYERIMSKAPEGLhtLIASGDVYIRSEQ-PLQDI-PEADVVCYGLWVDPSLATNHGVFVSSRKSPe 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   197 VLDIYYQGTEAEIQRCVRPDGRVPLVSGVVFFSVETAERLLATHvsppldactylGLDSGARPVQLSLFFDILHCMAENV 276
Cdd:PRK13412  205 RLDFMLQKPSLEELGGLSKTHLFLMDIGIWLLSDRAVELLMKRS-----------GKEDGGKLKYYDLYSDFGLALGTHP 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   277 TREDflvgrppelgqgdadvagylqsaraqlwRELRDQPLTMAYVSSGS-YSYMTSSAsefLLSLTLP----GAPGAQIV 351
Cdd:PRK13412  274 RIGD----------------------------DELNALSVAILPLPGGEfYHYGTSRE---LISSTLAvqnlVTDQRRIM 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   352 HSQVEEQQLLAAGSSVVSclleGPVQLGPGSV-LQHCHLQGPIHIGAGCLVTGLDTAHSK-ALHGRELRDLVLQGHHtrl 429
Cdd:PRK13412  323 HRKVKPHPAMFVQNAVLS----GKLTAENATLwIENSHVGEGWKLASRSIITGVPENSWNlDLPEGVCIDVVPVGDR--- 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   430 hgspGHAFTLVGRLDSW---ERQGAGTYLNVPWSEFFKRTGVrAWdlwdPETLPAEYCLPSARLFPVLHPSRELGPQdLL 506
Cdd:PRK13412  396 ----GFVARPYGLDDVFkgaLADGKTTWFGRPFLEWMEARGL-SW----PDLKGRTDDLQAAHLFPVVTSVEELGAV-LR 465
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   507 WMLdHQEDGGEALRAWRASWRLSWEQLQPCLDRAATLASRrdlffrqalhkarhvlEARqdlslRPLIWAAVREGCPGPL 586
Cdd:PRK13412  466 WML-SEPSLEEGKEIWLRSEKLSADEISAYANLARLYAQR----------------EAF-----RKANWRALAANHEKSV 523
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   587 LATLDQVAAGA-------GDPGVAARALACVADVLGCMAEGRGGLRSGPAANPEWMRPFSYLECGdLAAGVEALAQErdk 659
Cdd:PRK13412  524 FYQLDLADAAEdfvrlllDMPEILPEDAPLMLRIHNRMFRARILKLSGARYREEEQAAFRLLRDG-LLDGAYPRKQT--- 599
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   660 wlsrPALLVRAarhyegagqilirqavmsaqhfvsteqvelpgpGQWVVAECPARVDFSGGWSDTPPLAYELGGAVLGLA 739
Cdd:PRK13412  600 ----PKLEVYS---------------------------------DQIVWGRSPVRIDLAGGWTDTPPYCLYSGGNVVNLA 642
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   740 VRVDGRRPIGARARRIPEPELWLavgpRQDEMTVKIVCRCLADLRDYCQPHAPGALLKAAFICAGIV---HVHSELQLSE 816
Cdd:PRK13412  643 IELNGQPPLQVYVKPCSEPHIVL----RSIDLGAMEVVRTNEELRDYKKVGSPFSIPKAALCLAGFAprfSAESYASLEE 718
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   817 QLLRtFGGGFELHTWSELPHGSGLGTSSILAGTALAALQRAAGRVVGTEALIHAVLHLEQVLTTGGGWQDQVGGLMPGIK 896
Cdd:PRK13412  719 QLKA-FGSGIEITLLAAIPAGSGLGTSSILAATVLGAISDFCGLAWDKNEICNRTLVLEQLLTTGGGWQDQYGGVLPGVK 797
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   897 V---GRSRAQLPLkveveevtvpegfVQKLNDHL----------LLVYTGKTRLARNLLQDVLRSWYARLPAVVQNAHSL 963
Cdd:PRK13412  798 LlqtGAGFAQSPL-------------VRWLPDSLftqpeyrdchLLYYTGITRTAKGILAEIVRSMFLNSTAHLQLLHEM 864
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654   964 VRQTEECAEGFRQGSLPLLGQCLTSYWEQKKLMAPGCEPLTVRRMMDVLAPHVHGQSLAGAGGGGFLYLLTKEPQQKEAL 1043
Cdd:PRK13412  865 KAHALDMYEAIQRGEFEEFGRLVGKTWEQNKALDSGTNPAAVEAIIELIKDYTLGYKLPGAGGGGYLYMVAKDPGAAERI 944

                  ....
gi 63175654  1044 EAVL 1047
Cdd:PRK13412  945 RKIL 948
COG2605 COG2605
Predicted kinase related to galactokinase and mevalonate kinase [General function prediction ...
707-999 1.39e-38

Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only];


Pssm-ID: 442017 [Multi-domain]  Cd Length: 328  Bit Score: 146.86  E-value: 1.39e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  707 VVAECPARVDFSGGWSDTPPLAYELGGAVLGLAvrvdgrrpIGARARripepelwLAVGPRQDEmtvKIVCRClADLRDY 786
Cdd:COG2605    1 IISRAPLRISFAGGGTDLPPYYLEHGGAVLNAA--------IDKYAY--------VTLEPRFDG---KIRLSS-SDTERV 60
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  787 CQPHAPGALLKAAFicagivhvhselqlsEQLLRTFG--GGFELHTWSELPHGSGLGTSSILAGTALAALQRAAGRVVGT 864
Cdd:COG2605   61 ETVDEDDDIPHPVI---------------REALKLFGigDGLEITTDSDAPAGSGLGSSSALTVALLNALHALLGLPLSP 125
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  865 EALIHAVLHLEQ-VLTTGGGWQDQVGGLMPGIKVGRSRAQ-------LPLKveveevtvpEGFVQKLNDHLLLVYTGKTR 936
Cdd:COG2605  126 YDLARLAYEIERnDLGEPGGKQDQYAAAFGGFNFIEFGPDgrvivnpLRIS---------PEILNELESNLLLFYTGITR 196
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 63175654  937 LARNLLQDVLRSWYARLPAVVQNAHSLVRQTEECAEGFRQGSLPLLGQCLTSYWEQKKLMAPG 999
Cdd:COG2605  197 ESSDILKEQVKNVEDGDEATLEALHEMKELALEMKEALLKGDLDEFGELLNEGWELKKRLASG 259
PksD COG3321
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
163-716 3.43e-05

Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442550 [Multi-domain]  Cd Length: 1386  Bit Score: 48.33  E-value: 3.43e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  163 ISWDSF---RGARVIALPGSPAYAQNHGVYLTDPqglvldiyyqgteaeiqrcVRPDGRVPLVSGVVFFSVETAERLLAT 239
Cdd:COG3321  847 VDWSALypgRGRRRVPLPTYPFQREDAAAALLAA-------------------ALAAALAAAAALGALLLAALAAALAAA 907
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  240 HVSPPLDACTYLGLDSGARPVQLSLFFDILHCMAENVTREDFLVGRPPELGQGDADVAGYLQSARAQLWRELRDQPLTMA 319
Cdd:COG3321  908 LLALAAAAAAALALAAAALAALLALVALAAAAAALLALAAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAA 987
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  320 YVSSGSYSYMTSSASEFLLSLTLPGAPGAQIVHSQVEEQQLLAAGSSVVSCLLEGPVQLGPGSVLQHCHLQGPIHIGAG- 398
Cdd:COG3321  988 AAAAAAAALAAAAALALLAAAALLLAAAAAAAALLALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAa 1067
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  399 -CLVTGLDTAHSKALHGRELRDLVLQGHHTRLHGSPGHAFTLVGRLDSWERQGAGTYLNVPWSEFFKRTGVRAWDLWDPE 477
Cdd:COG3321 1068 lLLLAALAELALAAAALALAAALAAAALALALAALAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAA 1147
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  478 TLPAEYCLPSARLFPVLHPSRELGPQDLLWMLDHQEDGGEALRAWRASWRLSWEQLQPCLDRAATLASRRDLFFRQALHK 557
Cdd:COG3321 1148 AALALAAAAAALAAALAAALLAAAALLLALALALAAALAAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAA 1227
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  558 ARHVLEARQDLSLRPLIWAAVREGCPGPLLATLDQVAAGAGDPGVAARALACVADVLGCMAEGRGGLRSGPAANPEWMRP 637
Cdd:COG3321 1228 AAAAALALLALAAAAAAVAALAAAAAALLAALAALALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAA 1307
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 63175654  638 FSYLECGDLAAGVEALAQERDKWLSRPALLVRAARHYEGAGQILIRQAVMSAQHFVSTEQVELPGPGQWVVAECPARVD 716
Cdd:COG3321 1308 AAAAAAAAAAAAALAAALLAAALAALAAAVAAALALAAAAAAAAAAAAAAAAAAALAAAAGAAAAAAALALAALAAAVA 1386
GHMP_kinases_N pfam00288
GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and ...
827-894 1.89e-04

GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and mevalonate kinases.


Pssm-ID: 395225 [Multi-domain]  Cd Length: 64  Bit Score: 40.61  E-value: 1.89e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 63175654    827 ELHTWSELPHGSGLGTSSILAGTALAALQRAAGRvvgteALIHAVLHLEQVLTTG-GGWQDQVGGLMPG 894
Cdd:pfam00288    1 DIEIESNIPLGAGLGSSAALAVALLLALNELFGL-----PLAKLALEAEELAGGGrGGGMDVAASLYGG 64
ERG12 COG1577
Mevalonate kinase [Lipid transport and metabolism]; Mevalonate kinase is part of the Pathway ...
799-1034 3.65e-03

Mevalonate kinase [Lipid transport and metabolism]; Mevalonate kinase is part of the Pathway/BioSystem: Isoprenoid biosynthesis


Pssm-ID: 441185 [Multi-domain]  Cd Length: 277  Bit Score: 40.60  E-value: 3.65e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  799 AFICAGIVHVHSELQLSEQllrtfggGFELHTWSELPHGSGLGTSSILAGTALAALQRAAGRVVGTEALIHAVLHLEQ-V 877
Cdd:COG1577   62 RYIKAAIEAALEYLGLPLK-------GFDIEIDSEIPRKRGLGSSAAVAVAVIRALAAFYGVELSKEELFKLALEAEKiV 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  878 LTTGGGwQDQV----GGLmpgIKVGRSRAQLPLKVeveevtvpegfvqKLNDHLLLVYTGKTRLARNLLQDVlRSWYARL 953
Cdd:COG1577  135 HGNPSG-LDTAastyGGP---IYYQRGDRAEPLEL-------------PKNLPLVVGDTGVPASTKELVAKV-RKLKERN 196
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63175654  954 PAVVQNA-HSLVRQTEECAEGFRQGSLPLLGQCLTSYweQKKLMAPGCEPLTVRRMMDVLAPH-VHGQSLAGAGGGGFLY 1031
Cdd:COG1577  197 PELYEAFlEEIGDLVEEAIEALEEGDLEALGELMNEN--HGLLRALGVSTPELDRLVEAARKAgALGAKLTGAGGGGCVI 274

                 ...
gi 63175654 1032 LLT 1034
Cdd:COG1577  275 ALA 277
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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