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Conserved domains on  [gi|90669191|ref|NP_696961|]
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solute carrier family 22 member 7 isoform b [Homo sapiens]

Protein Classification

solute carrier family 22 member 7( domain architecture ID 13024583)

solute carrier family 22 member 7 (SLC22A7) mediates sodium-independent multispecific organic anion transport

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
106-501 0e+00

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 523.91  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 106 DEPATVPCSQGWEYDHSEFSSTIATEsqWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVL 185
Cdd:cd17447   1 SDLPVVPCQNGWVYDHSTFSSTIATE--WDLVCDRKGLNQATATFFFAGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 186 GLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVT 265
Cdd:cd17447  79 GLASAFSVSYVMFAITRTLTGFALTGFSIISMVLCVEWVDIEHRTVAGVLISLFWTVGNMLLALVAYLIRDWRWLILAVT 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 266 LPCAPGILSLWWVPesarwlltqghvkeahryllhcarlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlrH 345
Cdd:cd17447 159 LPCAPGIITWWWVP-----------------------------------------------------------------K 173
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 346 ISLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSS 425
Cdd:cd17447 174 ISLCTGIVWFGVAFTYYGISFNISGFGLNVYLTQFIYGAIELPAKLLAYLLLDRIGRRLTQAGSLILTGLSIGINILIPS 253
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 90669191 426 DMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYGGI 501
Cdd:cd17447 254 EFTVVRTVIAVLGKGFSEAAFTTVFLYTSELYPTVLRQNGMGYTSFIARLGGSLAPLVILLDDVWLSLPQVIFCGV 329
 
Name Accession Description Interval E-value
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
106-501 0e+00

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 523.91  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 106 DEPATVPCSQGWEYDHSEFSSTIATEsqWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVL 185
Cdd:cd17447   1 SDLPVVPCQNGWVYDHSTFSSTIATE--WDLVCDRKGLNQATATFFFAGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 186 GLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVT 265
Cdd:cd17447  79 GLASAFSVSYVMFAITRTLTGFALTGFSIISMVLCVEWVDIEHRTVAGVLISLFWTVGNMLLALVAYLIRDWRWLILAVT 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 266 LPCAPGILSLWWVPesarwlltqghvkeahryllhcarlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlrH 345
Cdd:cd17447 159 LPCAPGIITWWWVP-----------------------------------------------------------------K 173
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 346 ISLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSS 425
Cdd:cd17447 174 ISLCTGIVWFGVAFTYYGISFNISGFGLNVYLTQFIYGAIELPAKLLAYLLLDRIGRRLTQAGSLILTGLSIGINILIPS 253
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 90669191 426 DMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYGGI 501
Cdd:cd17447 254 EFTVVRTVIAVLGKGFSEAAFTTVFLYTSELYPTVLRQNGMGYTSFIARLGGSLAPLVILLDDVWLSLPQVIFCGV 329
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
11-523 0e+00

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 522.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191    11 GGFGPFQLRNVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGApANFSHQDvWLEAHLPREPDGTLSSCLRFAYPQALP 90
Cdd:TIGR00898   1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDA-ANLSSRC-ELNLTLPRLPDGRPESCLRFMVDQWAN 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191    91 NTTLGEERQSRGELEdEPATVPCSQGWEYDHSEFSSTIATEsqWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFG 170
Cdd:TIGR00898  79 PSLLGCEPLKLSDLG-LAATEPCLDGWEYSYDTFSSTIVTE--WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFG 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   171 RRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALV 250
Cdd:TIGR00898 156 RKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLV 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   251 GYLIRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLLHCARLNGRPVCED----SFSQEAVSKVAAge 326
Cdd:TIGR00898 236 AYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEvlslSLEKDLSSSKKQ-- 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   327 rvvrrPSYLDLFRTPRLRHISLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQ 406
Cdd:TIGR00898 314 -----YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTM 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   407 AGTLLGTALAFGTRLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALL 486
Cdd:TIGR00898 389 AASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYL 468
                         490       500       510
                  ....*....|....*....|....*....|....*..
gi 90669191   487 DGVWLSLPKLTYGGIALLAAGTALLLPETRQAQLPET 523
Cdd:TIGR00898 469 GEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPET 505
Sugar_tr pfam00083
Sugar (and other) transporter;
151-482 1.19e-24

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 106.97  E-value: 1.19e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   151 FFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASV---SYVMFAITRTLTGSALAGFTIIVmPLEL-EWLDV 226
Cdd:pfam00083  55 FSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVLQGAAKgkwSVYQLIVGRVLVGIGVGGASVLA-PMYIsEIAPK 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   227 EHRTVAGVLSSTFWTGGVMLLALVGYLIRD------WRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLlh 300
Cdd:pfam00083 134 KLRGALGSLYQLAITFGILLAYIFGLGLNKtsnsdgWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRLEEAREVL-- 211
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   301 cARLNGRPVCEDSFSQEAVSKVAAGERvvRRPSYLDLFRTPRLRHISLCCVVVWFGVNFS------YYG----LSLDVSg 370
Cdd:pfam00083 212 -AKLRGVPDVDRELDEIKDSLEAGQEA--EKASWKELFSTKTRRQRLLIGVMLQIFQQLTginaifYYSttifENLGLS- 287
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   371 lglNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAF-----GTRLLVSSdmKSWSTVLAVMGKAFSEAA 445
Cdd:pfam00083 288 ---DSFLVTIIVGVVNFVFTFIAIFLVDRFGRRPLLLLGAAGMAICFvilgiVALLGVSK--SDWAGIVAIVFIALFIAF 362
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 90669191   446 FTT-----AYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPL 482
Cdd:pfam00083 363 FAMgwgpvPWVIVSELFPLSVRSKAMALATAANWLANFLIGF 404
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
147-480 2.04e-21

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 95.81  E-value: 2.04e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 147 ASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDV 226
Cdd:COG2814  50 VVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPP 129
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 227 EHRTVAGVLSSTFWTGGVMLLALVGYLIRD---WRWLLLAVTLPCAPG-ILSLWWVPESARwlltqghvkeahryllhca 302
Cdd:COG2814 130 ERRGRALGLLGAGLGLGPALGPLLGGLLADlfgWRWVFLVNAVLALLAlLLLLRLLPESRP------------------- 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 303 rlngrpvcedsfsqeavskvaaGERVVRRPSYLDLFRTPRLRHISLCCVVVWFGVNFSYYGLSL---DVSGLGLNVYQTQ 379
Cdd:COG2814 191 ----------------------AARARLRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLPLylqEVLGLSASAAGLL 248
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 380 L-LFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTrLLVSSDMKSWSTVLAVMGKAFSeAAFTTAYLFTSELYP 458
Cdd:COG2814 249 LaLFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLL-LALAGSLWLLLLALFLLGFGFG-LLFPLLQALVAELAP 326
                       330       340
                ....*....|....*....|..
gi 90669191 459 TVLRQTGMGLTALVGRLGGSLA 480
Cdd:COG2814 327 PEARGRASGLYNSAFFLGGPLA 348
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
139-484 8.11e-07

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 51.50  E-value: 8.11e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  139 EQKGLNRAASTFffaGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMP 218
Cdd:PRK11551  50 AQMGWAFSAGIL---GLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIA 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  219 LELEWLDVEHRTVA-GVLSSTFWTGGVM--LLALVGYLIRDWR---WLLLAVTLPCAPgiLSLWWVPESARWLLTQGHVK 292
Cdd:PRK11551 127 LTSEAVGPRLRGTAvSLMYCGVPFGGALasVIGVLAAGDAAWRhifYVGGVGPLLLVP--LLMRWLPESRAFAQAAGAGK 204
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  293 EAHryllhcarlngrPVCEDSFSQEavskvaagervvRRPSYLDLFrtprlrhISLCC--VVVWFGVNFsyygLSLDVSG 370
Cdd:PRK11551 205 QRA------------PVLRALFGEG------------RATATLLLW-------ISYFFtlIVLYFLLNW----LPSLLVG 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  371 LGLNVYQT---QLLF---GAVelpSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMksWSTVLAVMGKAFSEA 444
Cdd:PRK11551 250 QGLSRSQAglvQIAFnigGAL---GSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFA--GMLLAGFAAGLFVVG 324
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 90669191  445 AFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAA 484
Cdd:PRK11551 325 GQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLA 364
 
Name Accession Description Interval E-value
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
106-501 0e+00

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 523.91  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 106 DEPATVPCSQGWEYDHSEFSSTIATEsqWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVL 185
Cdd:cd17447   1 SDLPVVPCQNGWVYDHSTFSSTIATE--WDLVCDRKGLNQATATFFFAGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 186 GLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVT 265
Cdd:cd17447  79 GLASAFSVSYVMFAITRTLTGFALTGFSIISMVLCVEWVDIEHRTVAGVLISLFWTVGNMLLALVAYLIRDWRWLILAVT 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 266 LPCAPGILSLWWVPesarwlltqghvkeahryllhcarlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlrH 345
Cdd:cd17447 159 LPCAPGIITWWWVP-----------------------------------------------------------------K 173
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 346 ISLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSS 425
Cdd:cd17447 174 ISLCTGIVWFGVAFTYYGISFNISGFGLNVYLTQFIYGAIELPAKLLAYLLLDRIGRRLTQAGSLILTGLSIGINILIPS 253
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 90669191 426 DMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYGGI 501
Cdd:cd17447 254 EFTVVRTVIAVLGKGFSEAAFTTVFLYTSELYPTVLRQNGMGYTSFIARLGGSLAPLVILLDDVWLSLPQVIFCGV 329
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
11-523 0e+00

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 522.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191    11 GGFGPFQLRNVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGApANFSHQDvWLEAHLPREPDGTLSSCLRFAYPQALP 90
Cdd:TIGR00898   1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDA-ANLSSRC-ELNLTLPRLPDGRPESCLRFMVDQWAN 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191    91 NTTLGEERQSRGELEdEPATVPCSQGWEYDHSEFSSTIATEsqWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFG 170
Cdd:TIGR00898  79 PSLLGCEPLKLSDLG-LAATEPCLDGWEYSYDTFSSTIVTE--WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFG 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   171 RRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALV 250
Cdd:TIGR00898 156 RKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLV 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   251 GYLIRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLLHCARLNGRPVCED----SFSQEAVSKVAAge 326
Cdd:TIGR00898 236 AYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEvlslSLEKDLSSSKKQ-- 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   327 rvvrrPSYLDLFRTPRLRHISLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQ 406
Cdd:TIGR00898 314 -----YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTM 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   407 AGTLLGTALAFGTRLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALL 486
Cdd:TIGR00898 389 AASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYL 468
                         490       500       510
                  ....*....|....*....|....*....|....*..
gi 90669191   487 DGVWLSLPKLTYGGIALLAAGTALLLPETRQAQLPET 523
Cdd:TIGR00898 469 GEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPET 505
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
107-501 4.50e-111

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 334.26  E-value: 4.50e-111
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 107 EPATVPCSQGWEYDHSEFSSTIATEsqWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLG 186
Cdd:cd17374   2 EADTEPCVDGWVYDRSKFTSTIVTE--WDLVCESQSLKSVAQSIFMAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFG 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 187 LASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTL 266
Cdd:cd17374  80 TCAAFAPTFPVYCVLRFLAGFAVSGISINTLILGTEWTTPRHRALAITLTSCFFSIGQMLLAGLAYAIRDWRLLQLVVSV 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 267 PCAPGILSLWWVPEsarwlltqghvkeahryllhcarlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlrhI 346
Cdd:cd17374 160 PFFLFFLYSWWLPK-----------------------------------------------------------------R 174
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 347 SLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSD 426
Cdd:cd17374 175 TLILSFVWFANSFSYYGLSLDLQHLGLNVFLLQFLFGAVEVPARCLALFLLNHMGRRISQAVLLLLAGLCILANIFVPQE 254
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 90669191 427 MKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYGGI 501
Cdd:cd17374 255 MQTLRTVLAVLGKGSSAAAFTISYVYTAELFPTVLRQTGMGLNSMFARIGGILAPLIMLLGVYSPLLPMIIYGVL 329
MFS_SLC22A6_OAT1_like cd17446
Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar ...
109-500 1.34e-94

Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily; This subfamily includes solute carrier family 22 member 6 (SLC22A6, also called organic anion transporter 1 or OAT1 or para-aminohippurate (PAH) transporter), SLC22A8 (or OAT3), and SLC22A20 (or OAT6). OAT1 and OAT3 are involved in the renal elimination of endogenous and exogenous organic anions (OAs). They function as OA exchangers, coupling the uptake of OAs against an electrochemical gradient with the efflux of intracellular dicarboxylates. SLC22A20 is an OA transporter that mediates the uptake of estrone sulfate. The OAT1-like subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341004 [Multi-domain]  Cd Length: 339  Bit Score: 292.01  E-value: 1.34e-94
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 109 ATVPCSQGWEYDHSEFSSTIATEsqWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLA 188
Cdd:cd17446   2 ATEPCTDGWVYDKSEFPSTIITE--WDLVCNHRALRQLAQSIYMAGVLVGAIVFGGLSDRFGRRPLLIWSYLQMAVSGTC 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 189 SAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPC 268
Cdd:cd17446  80 AAFSPSFPIYCVFRFLTGMALSGIVLNSVSLNVEWMPTRVRAVVGTLLGYCYTLGQLILAGVAYAIRDWRWLQLAVSLPF 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 269 APGILSLWWVPesarwlltqghvkeahryllhcarlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlrHISL 348
Cdd:cd17446 160 FIFFLYSWWFP-----------------------------------------------------------------RITF 174
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 349 CCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMK 428
Cdd:cd17446 175 CLSLVWFSTSFAYYGLAMDLQKFGVSIYLIQIIFGAVDIPAKFISTLTMSYLGRRPTQAAALILAGIMILANIFVPQDLQ 254
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 90669191 429 SWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYGG 500
Cdd:cd17446 255 TVRTALAVFGKGCLAASFNCVYLYTGELYPTVIRQTGMGLGSTMARLGGIVAPLVKMLGEYYPFLPLIIYGA 326
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
116-501 7.80e-88

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 274.07  E-value: 7.80e-88
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 116 GWEYDHSEFSSTIATEsqWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSY 195
Cdd:cd17317   1 GWEFDYSVSESTIVTE--WDLVCDRDWLVALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSY 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 196 VMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCAPGILSL 275
Cdd:cd17317  79 ELFLVLRFLVGVTSAGIFTVGFVLGMEIVGPKYRSFVGILFGLFWALGYMLLALLAYLIRDWRWLQLAISLPGLLFLLLL 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 276 WWVPesarwlltqghvkeahryllhcarlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlRHIsLCCVVVWF 355
Cdd:cd17317 159 WWLP----------------------------------------------------------------RRT-IIVGLIWF 173
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 356 GVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMKSWSTVLA 435
Cdd:cd17317 174 VTSLVYYGLSLNSSNLGGNLYLNFFLSGLVEIPAYFLALLLLDRLGRRWTLSGSLLLAGLACLVTALLPDDENTLALTLA 253
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 90669191 436 VMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYGGI 501
Cdd:cd17317 254 LVGKFAISAAFSVIYLYTAELYPTVVRNTGVGLCSTVARVGAILAPFIVLLGKIGPLLPLIIFGVL 319
MFS_SLC22A16_CT2 cd17375
Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major ...
111-499 9.66e-58

Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 16 (SLC22A16) is also called carnitine transporter 2 (CT2), fly-like putative transporter 2 (FLIPT2), organic cation transporter OKB1, or organic cation/carnitine transporter 6 (OCT6). It is a partially sodium-ion dependent high affinity carnitine transporter. It also transports organic cations such as tetraethylammonium (TEA) and doxorubicin. It is one of several organic cation transporters (OCTs) that falls into the SLC22 (solute carrier 22) family. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. SLC22A16 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340933 [Multi-domain]  Cd Length: 341  Bit Score: 196.12  E-value: 9.66e-58
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 111 VPCSQGWEYDHSEFSSTIATesQWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASA 190
Cdd:cd17375   6 FSCSDGFVYDQSKWESSIVT--DWDLVCDREWLAKLIQPIFMLGVLLGAVIFGDIADRIGRRPVLWFTSTGQFVFGIAVA 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 191 ASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCAP 270
Cdd:cd17375  84 FTFDYYSFVIVRFLLAMVSSGYLVVVFVYVTEFTGIKARTWASMHVHAFFAVGIMVVALVGYLVRTWWIYQIILSLVTIP 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 271 GILSLWWVPesarwlltqghvkeahryllhcarlngrpvcedsfsqeavskvaagervvRRpsyldlfrtprlrhiSLCC 350
Cdd:cd17375 164 FILCCWMLP--------------------------------------------------KR---------------TITV 178
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 351 VVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMKSW 430
Cdd:cd17375 179 WLIWFTGSLGYYVFSLGSVNLGGNEYLNLFLVGAVEIPSYIIACIGMDKLGRRNTLAPFLLLSALACMLIMVIPQDYEVL 258
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 90669191 431 STVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYG 499
Cdd:cd17375 259 TIVLSMTGKFAIAIAFGLIYLYTAELYPTIVRSLAVGSGSMMCRVGSVVAPFCVYLSDVWIFLPQLLVG 327
MFS_SLC22A4_5_OCTN1_2 cd17376
Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 ...
102-501 4.02e-48

Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 and 2) of the Major Facilitator Superfamily of transporters; This subfamily is composed of solute carrier family 22 members 4 (SLC22A4) and 5 (SLC22A5), and similar proteins. SLC22A4 is also called ergothioneine transporter (ETT) or organic cation/carnitine transporter 1 (OCTN1). It is a sodium-ion dependent, low affinity carnitine transporter, and a highly specific transporter for the uptake of ergothioneine (ET), a thiolated derivative of histidine with antioxidant properties. ET is a natural compound produced only by certain fungi and bacteria and must be absorbed from the diet by humans and other vetebrates. SLC22A5, also called organic cation/carnitine transporter 2 (OCTN2), is a sodium-ion dependent, high affinity carnitine transporter involved in the active cellular uptake of carnitine. SLC22A4/5 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340934 [Multi-domain]  Cd Length: 342  Bit Score: 170.34  E-value: 4.02e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 102 GELEDEPatvpCSQGWEYDHSEFSSTIATEsqWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVS 181
Cdd:cd17376   1 TQIEQEP----CLDGWEYSQDVYLSTIVTE--WNLVCEDDWKVPLTTSLFFVGVLLGSFISGQLSDRFGRKKVLFATMAV 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 182 TLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSS-TFWTGGVMLLALVGYLIRDWRWL 260
Cdd:cd17376  75 QTGFSFLQIFSPSWEMFTVLFVIVGMGQISNYVVAFVLGTEILGKSVRILFSTLGVcIFYAIGYMLLPLFAYFIRDWRML 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 261 LLAVTLP---CAPgilsLWWVpesarwlltqghvkeahryllhcarlngrpvcedsfsqeavskvaagervvrrpsyldl 337
Cdd:cd17376 155 LLALTLPgvlCVP----LWWF----------------------------------------------------------- 171
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 338 frTPRlrhISLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTL-LGTALA 416
Cdd:cd17376 172 --IPI---TTIMSLLLWMAISVGYFGLSLNTPNLHGDPYLNCFLSAVIEVPAYIIAWLLLRSLPRRYSIAATLvLGGGVL 246
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 417 FGTRlLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKL 496
Cdd:cd17376 247 LFIQ-LVPTDLQVLATALVMLGKFGITAAFSMVYVYTAELYPTVVRNMGVGVCSTASRIGSIISPYFVYLGAYDRYLPYI 325

                ....*
gi 90669191 497 TYGGI 501
Cdd:cd17376 326 LMGSL 330
MFS_SLC22A15 cd17377
Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; ...
119-499 5.87e-46

Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 15 (SLC22A15) is also called fly-like putative transporter 1 (FLIPT1). It is expressed at the highest levels in the kidney and brain. It is a member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A15 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340935 [Multi-domain]  Cd Length: 353  Bit Score: 164.95  E-value: 5.87e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 119 YDHSEFSSTIateSQWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMF 198
Cdd:cd17377  19 HFSSSFTSIV---SEWFLVGNAAYKVSLASSFFFAGVLIGVVSFGQLSDRFGRKPVYLTGLALDILFAYFNALAPSYEFF 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 199 AITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPcapGILslwwv 278
Cdd:cd17377  96 AVSRFLVGVMNGGMSLVAFVLLNECVGKSYWALAGSLGGLFFAVGIAQYALLGYFIRSWRTLAVVVNLQ---GTL----- 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 279 pesarwlltqghvkeahrYLLHCARLNGRpvcedsfsqeavskvaagervvrrpsyldlfrtprlrhiSLCCVVVWFGVN 358
Cdd:cd17377 168 ------------------VFLLSLFIPGR---------------------------------------TLILMYVWFVCS 190
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 359 FSYYGLSLDVSGLGLNVYQTQLLFGAVELPS-KLLVYL-SVRYAGRRLTQAGTLL--GTALAFGTRLLVSSDMKSW---- 430
Cdd:cd17377 191 LVYYGLTLNAGDLGGNIYLNLALSGLVELPAyPLCIYLiNQKWSGRRRTLAGFLFlgGIACLLVMFVPEKKDSGVFavvn 270
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 90669191 431 STVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYG 499
Cdd:cd17377 271 STSLSLLGKLTISAAFNIVYIYTSELYPTVVRNAGLGVCSMFSRVGGIIAPFIPSLKSVQWSLPFIVFG 339
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
106-499 6.88e-40

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 147.88  E-value: 6.88e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 106 DEPATVPCSQGWEYDhsEFSSTIATEsqWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVL 185
Cdd:cd17379   1 SMLPLSPCQDGWVYN--TPRSSIVTE--FNLVCEDAWKLDLFQSSLNLGFLIGSIVIGYLADRFGRKVCFLISILGNGVS 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 186 GLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVT 265
Cdd:cd17379  77 GVLMAFSPNYPWFLIFRFLQGLFGKGGWMTGYVLVTEFVGSKYRRTVGIVYQMFFTLGLLILPGIAYFIPHWRWLQLAVT 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 266 LPCAPGILSLWWVPEsarwlltqghvkeaHRYLLHCArlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlrh 345
Cdd:cd17379 157 LPNFLFLLYYWFIPK--------------HTFILMYA------------------------------------------- 179
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 346 islccvvvWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSS 425
Cdd:cd17379 180 --------WFTSAVVYQGLIMRLGITGGNLYLDFFISALVELPAAFIILLTIDRIGRRLPFAASNIVAGAACLITAFIPP 251
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 90669191 426 DMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAP-LAALLDGVWLSLPKLTYG 499
Cdd:cd17379 252 DLHWLKTTIACVGRLGITMAFEIVCLVNTELYPTFLRNLGVSVCSSLCDIGGIIAPfLLYRLAEIWLELPLIVFG 326
MFS_OCT_plant cd17378
Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of ...
114-486 6.73e-33

Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of transporters; Plant organic cation/carnitine transporters (OCTs) are sequence-similar to their animal counterparts, which are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. Little is know about plant OCTs. In Arabidopsis, there are six genes belonging to this family that show distinct, organ-specific expression pattern of the individual genes. AtOCT1 has been found to affect root development and carnitine-related responses in Arabidopsis. AtOCT4, 5 and 6 are up-regulated during drought stress, AtOCT3 and 5 during cold stress and AtOCT5 and 6 during salt stress treatments. Plant OCTs belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340936 [Multi-domain]  Cd Length: 342  Bit Score: 128.63  E-value: 6.73e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 114 SQGWEYDHSEFSSTIateSQWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSD-RFGRRRLLLVAYVSTLVLGLASAAS 192
Cdd:cd17378   8 RSSWEWDGGSKVSIV---SEWGLICAGSFLVGLPQSSFFVGCLIGSGVLGHLADsSLGRKNLLFLSCLLMALSGIATAFS 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 193 VSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLI-RDWRWLLLAVTLPcaPG 271
Cdd:cd17378  85 PNYWVYAFLRFLTGFGRSGIGTCALVLATEPVGPKWRGQVGMSTFFFFVLGFMSLPGIAYLNgSSWRVLYFWTSIP--AL 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 272 ILSLWWVPESARWLLTqghvkeahryllhcarlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlrhislccV 351
Cdd:cd17378 163 IYCILVYLFARRLLAV---------------------------------------------------------------M 179
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 352 VVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMKSW- 430
Cdd:cd17378 180 VIGFGIGMVYYGIPLAVGNLKFNIYLSVALNALSELPAFVITAFLLDRFGRRPSLLGFTLLSGASCLLCFVLSIGGTTSl 259
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 90669191 431 STVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALL 486
Cdd:cd17378 260 QIALELVGFFGAAGAFNLLYIYTVELFPTCVRNAALGMLRQALVVGGIFAPFIVSL 315
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
129-484 1.58e-30

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 122.64  E-value: 1.58e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 129 ATESQWDLVCEQKGLnraASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSA 208
Cdd:cd17372  24 AVQCEWNLSAWQVAL---ITSVVFAGMMIGSYLWGIVSDKYGRRKGLIISALWTFYAGFLSAFAPNYMWLIILRCLVGLG 100
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 209 LAGFTIIVMpLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIR---DWRWLLLAVTLPCAPGILSLWWVPESarwl 285
Cdd:cd17372 101 LGGGPQLAS-WYLEFLPAKSRGTWMVLFSVFWTVGTIFEASLAWLVMprlGWRWLLAFSSVPSSLLLVFYRWTPKT---- 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 286 ltqghvkeahryllhcarlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlrhiSLCCVVVWFGVNFSYYGLS 365
Cdd:cd17372 176 -------------------------------------------------------------TLLLWVIWFGNAFAYYGVV 194
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 366 L---------DVSGLGLNV------------------YQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFg 418
Cdd:cd17372 195 LlttelnnshNVCGSKSDSdsgesptekqcrnsndvdYRDVFIATFAEFPGLLISAAMIDRLGRKASMASMLFTCCIFL- 273
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 90669191 419 tRLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAA 484
Cdd:cd17372 274 -LLLLICQSPFILTVLLFGGRACISAAFTVVYIYTPEVYPTAVRALGVGTGSSVGRIGAILCPFIA 338
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
150-470 1.94e-25

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 109.35  E-value: 1.94e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   150 FFFAGVLVGAVAFGYLSDRFGRRRLLL---VAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVmPLEL-EWLD 225
Cdd:TIGR00879  79 IFLVGGFIGALFAGWLSDRFGRKKSLLiiaLLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALV-PMYLsEIAP 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   226 VEHRTVAGVLSSTFWTGGVMLLALVGYLIRD------WRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLl 299
Cdd:TIGR00879 158 KALRGALTSLYQLAITFGILVAYGFGSGKVSlnntlgWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSL- 236
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   300 hcARLNGRPVCEDSFSQEAVSKVAAGERVVRR-----PSYLDLFRTPRLRHISLCCVVV--WF-GVN-FSYYGL----SL 366
Cdd:TIGR00879 237 --ARLRGTSGEDKELLDELELIDIKRSIEKRSvqpswGSLFSSTRRIRRRLFLGVVLQWfqQFtGINaIMYYSPtifeNA 314
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   367 DVSGLgLNVYQTqLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAF--GTRLLVSSDMKSWSTV-------LAVM 437
Cdd:TIGR00879 315 GVSTD-HAFLVS-IIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLfvLGILGASFVTGSSKSSgnvaivfILLF 392
                         330       340       350
                  ....*....|....*....|....*....|...
gi 90669191   438 GKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTA 470
Cdd:TIGR00879 393 IAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAV 425
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
124-483 4.79e-25

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 106.53  E-value: 4.79e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 124 FSSTIATESQWDLVCEQKGLNRAAStffFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRT 203
Cdd:cd17316  21 VAPVLAAEFSLGLSLLQTGLLFAAG---FLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRF 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 204 LTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRD-------WRWLLLavtLPCAPGILSLW 276
Cdd:cd17316  98 LQGIGIGGEYPGASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIPllsgdwgWRILFL---IGALPALLALL 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 277 wvpesarwlltqghvkeahryllhcarlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprLRHISLCCVVVWFG 356
Cdd:cd17316 175 ------------------------------------------------------------------LRRRTLLLILLWFF 188
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 357 VNFSYYGL-----SLDVSGLGLNVYQTQ---LLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMK 428
Cdd:cd17316 189 ISFGYYGLttflpTYLQTVLGLSPATSSlylLLISLGALVGALIAGLLSDRIGRKKTLVIGLILSGILALPLFYLLSGSP 268
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*
gi 90669191 429 SWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLA 483
Cdd:cd17316 269 TLLLLLLFILSFFVGGVWGALYAYLAELFPTEVRATGVGLSYNLGRLGGGGAPPL 323
Sugar_tr pfam00083
Sugar (and other) transporter;
151-482 1.19e-24

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 106.97  E-value: 1.19e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   151 FFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASV---SYVMFAITRTLTGSALAGFTIIVmPLEL-EWLDV 226
Cdd:pfam00083  55 FSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVLQGAAKgkwSVYQLIVGRVLVGIGVGGASVLA-PMYIsEIAPK 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   227 EHRTVAGVLSSTFWTGGVMLLALVGYLIRD------WRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLlh 300
Cdd:pfam00083 134 KLRGALGSLYQLAITFGILLAYIFGLGLNKtsnsdgWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRLEEAREVL-- 211
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   301 cARLNGRPVCEDSFSQEAVSKVAAGERvvRRPSYLDLFRTPRLRHISLCCVVVWFGVNFS------YYG----LSLDVSg 370
Cdd:pfam00083 212 -AKLRGVPDVDRELDEIKDSLEAGQEA--EKASWKELFSTKTRRQRLLIGVMLQIFQQLTginaifYYSttifENLGLS- 287
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   371 lglNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAF-----GTRLLVSSdmKSWSTVLAVMGKAFSEAA 445
Cdd:pfam00083 288 ---DSFLVTIIVGVVNFVFTFIAIFLVDRFGRRPLLLLGAAGMAICFvilgiVALLGVSK--SDWAGIVAIVFIALFIAF 362
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 90669191   446 FTT-----AYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPL 482
Cdd:pfam00083 363 FAMgwgpvPWVIVSELFPLSVRSKAMALATAANWLANFLIGF 404
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
153-484 2.29e-23

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 102.43  E-value: 2.29e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   153 AGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHR-TV 231
Cdd:TIGR00895  63 IGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRgTA 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   232 AGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCAPGILSLW---WVPESARWLLTQGHVKEAHRYllhcARLNGRP 308
Cdd:TIGR00895 143 VGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLlmrFLPESIDFLVSKRPETVRRIV----NAIAPQM 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   309 VCEDSFSQEAVSKVAAGERVVRrpsylDLFRTPRLRHISLCCVVVWFGVNFSYYGL-------------SLDVSGLGLNV 375
Cdd:TIGR00895 219 QAEAQSALPEQKSTQGTKRSVF-----KALFQGKTARITVLLWLLYFMLLVGVYFLtnwlpklmvelgfSLSLAATGGAL 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   376 YQTQLLFGAVelpskLLVYLSVRYaGRRLTQAGTLLGTALAFGTRLLVSSDmkswsTVLAVMG---KAFSEAAFTTAYLF 452
Cdd:TIGR00895 294 FNFGGVIGSI-----IFGWLADRL-GPRVTALLLLLGAVFAVLVGSTLFSP-----TLLLLLGaiaGFFVNGGQSGLYAL 362
                         330       340       350
                  ....*....|....*....|....*....|..
gi 90669191   453 TSELYPTVLRQTGMGLTALVGRLGGSLAPLAA 484
Cdd:TIGR00895 363 MALFYPTAIRATGVGWAIGIGRLGAIIGPILA 394
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
154-480 5.92e-22

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 98.42  E-value: 5.92e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 154 GVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSAlAGFTIIVMPLEL-EWLDVEHRTVA 232
Cdd:cd17358  53 GALIGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGFG-GGAASVVVPVYIaEIAPKNVRGAL 131
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 233 GVLSSTFWTGGVMLLALVGYLIRdWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLlhcARLNGRPVCED 312
Cdd:cd17358 132 GSLNQLLVNIGILLGYVLGSFLP-WRTLALIGAIPPVVFLILLFFIPESPRWLAKKGREEEAEKSL---QFLRGKDADIS 207
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 313 SFSQEAVSKVAAGERVVRRPSYLDLFRTPRLRHISLCCVVVWF----GVN-FSYYGLS-LDVSGLGLNVYQTQLLFGAVE 386
Cdd:cd17358 208 KEAAEIQEELAELEKEAKESSFSDLFQRKYLKPLVIGLGLMLFqqlsGINaVIFYASSiFDEAGSGLDPNTATIIIGVVQ 287
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 387 LPSKLLVYLSVRYAGRRL----TQAGTLLGT-ALAFGTRLLVSSDMKSWSTVLAVMGKAFSEAAFTTAY-----LFTSEL 456
Cdd:cd17358 288 VVGTLVATLLVDRLGRRPlllvSAIGMGIGLlALGLYFYLQEHGALLSSVSWLPLVGLVIYIISFSIGLgplpwVIMSEI 367
                       330       340
                ....*....|....*....|....
gi 90669191 457 YPTVLRQTGMGLTALVGRLGGSLA 480
Cdd:cd17358 368 FPAKIKGLAGSLVTLVNWLFAFIV 391
MFS_1 pfam07690
Major Facilitator Superfamily;
147-481 8.22e-22

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 96.72  E-value: 8.22e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   147 ASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDV 226
Cdd:pfam07690  37 LLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGAGALFPAALALIADWFPP 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   227 EHRTVAGVLSSTFWTGGVMLLALVGYLI---RDWRWLLLAVTLPCAPGILsLWWVPESARwlltqghvkeahryllhcar 303
Cdd:pfam07690 117 EERGRALGLVSAGFGLGAALGPLLGGLLaslFGWRAAFLILAILSLLAAV-LLLLPRPPP-------------------- 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   304 lngrpvcedsfsqEAVSKVAAGERVVRRPSYLDLFRTPRLRHISLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFG 383
Cdd:pfam07690 176 -------------ESKRPKPAEEARLSLIVAWKALLRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLG 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   384 AVELPSKLLV----YLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPT 459
Cdd:pfam07690 243 LGGLLGAIGRlllgRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDLAPK 322
                         330       340
                  ....*....|....*....|..
gi 90669191   460 VLRQTGMGLTALVGRLGGSLAP 481
Cdd:pfam07690 323 EERGTASGLYNTAGSLGGALGP 344
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
147-480 2.04e-21

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 95.81  E-value: 2.04e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 147 ASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDV 226
Cdd:COG2814  50 VVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPP 129
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 227 EHRTVAGVLSSTFWTGGVMLLALVGYLIRD---WRWLLLAVTLPCAPG-ILSLWWVPESARwlltqghvkeahryllhca 302
Cdd:COG2814 130 ERRGRALGLLGAGLGLGPALGPLLGGLLADlfgWRWVFLVNAVLALLAlLLLLRLLPESRP------------------- 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 303 rlngrpvcedsfsqeavskvaaGERVVRRPSYLDLFRTPRLRHISLCCVVVWFGVNFSYYGLSL---DVSGLGLNVYQTQ 379
Cdd:COG2814 191 ----------------------AARARLRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLPLylqEVLGLSASAAGLL 248
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 380 L-LFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTrLLVSSDMKSWSTVLAVMGKAFSeAAFTTAYLFTSELYP 458
Cdd:COG2814 249 LaLFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLL-LALAGSLWLLLLALFLLGFGFG-LLFPLLQALVAELAP 326
                       330       340
                ....*....|....*....|..
gi 90669191 459 TVLRQTGMGLTALVGRLGGSLA 480
Cdd:COG2814 327 PEARGRASGLYNSAFFLGGPLA 348
MFS_SLC22A31 cd17443
Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier ...
110-277 2.88e-21

Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier family 22, member 31 (SLC22A31) is an uncharacterized member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A31 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341001 [Multi-domain]  Cd Length: 343  Bit Score: 95.23  E-value: 2.88e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 110 TVPCSQGWEYDHSEFSSTIATeSQWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLAS 189
Cdd:cd17443   5 AVLCTGGWPFSAAAGLGSNLV-TEWNLVCDDGWKVPLEKISYLLGWLLGYIILGAGCDRLGRRAAFVLSLVLATLLGVSV 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 190 AASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCa 269
Cdd:cd17443  84 ALSASPPTFLVLRLLQGGTLAGVFLSLYIARLELCDPSHRLMVSMGAGFFSVAGELLLPGLAVLCRDWRVLQGVGTLPL- 162

                ....*...
gi 90669191 270 pGILSLWW 277
Cdd:cd17443 163 -LLLLLYW 169
MFS_SVOP cd17441
Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic ...
133-500 1.77e-20

Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein (SVOP) is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. This SVOP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340999 [Multi-domain]  Cd Length: 372  Bit Score: 93.34  E-value: 1.77e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 133 QWDLVCEQKGLnraASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGF 212
Cdd:cd17441  28 EWRLPSWQVAL---LTSVVFIGMMLSSSLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPIYSWILVLRGLVGFGIGGV 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 213 TIIVMpLELEWLDVEHRTVAGVLSSTFWTGGV---MLLALVGYLIRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTqg 289
Cdd:cd17441 105 PQSVT-LYAEFLPMKSRAKCILLIEVFWALGTvfeVLLAVFVMPTLGWRWLLILSALPLLIFAVLCFWLPESARYWTT-- 181
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 290 hvkeahrYLLHCarlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlrhislccvvVWFGVNFSYYGLSL--- 366
Cdd:cd17441 182 -------ILLWF---------------------------------------------------IWFSNAFSYYGLVLltt 203
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 367 ------DVSGLGLNV-----------------YQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAgtLLGTALAFGTRLLV 423
Cdd:cd17441 204 elfqagDVCSGSSGKkvegkcsleceylttsdYMDLLWTTLSEFPGLLVTLWIIDRFGRKKTMA--LCFFVFSFCTLLLF 281
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 90669191 424 SSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAA--LLDGVwLSLPKLTYGG 500
Cdd:cd17441 282 SCVGRFSLTVLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAqvMLESS-VYLTLSVYSG 359
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
147-484 2.38e-20

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 92.87  E-value: 2.38e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 147 ASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDV 226
Cdd:cd06174  36 LFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSFWLLLLGRFLLGLGSGLIDPAVLALIADLFPE 115
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 227 EHRTVAGVLSSTFWTGGVMLLALVGYLI-----RDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLLHc 301
Cdd:cd06174 116 RERGRALGLLQAFGSVGGILGPLLGGILasslgFGWRAVFLIAAALALLAAILLLLVVPDPPESARAKNEEASSKSVLK- 194
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 302 arlngrpvcedsfsqeavskvaagervvrrpSYLDLFRTPRLrhisLCCVVVWFGVNFSYYGLSL--------DVSGLGL 373
Cdd:cd06174 195 -------------------------------LLKRVLKNPGL----WLLLLAIFLVNLAYYSFSTllplflldLGGLSVA 239
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 374 NVYQTQLLFGAVELPSKLL-VYLSVRYAGRRLTQAGTLLGTALAFGtrLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLF 452
Cdd:cd06174 240 VAGLLLSLFGLAGALGSLLlGLLSDRLIGRKPLLLIGLLLMALGLA--LLLLAPSLLLLLLLLLLLGFGLGGLLPLSFAL 317
                       330       340       350
                ....*....|....*....|....*....|..
gi 90669191 453 TSELYPTVLRQTGMGLTALVGRLGGSLAPLAA 484
Cdd:cd06174 318 IAELFPPEIRGTAFGLLNTFGFLGGAIGPLLA 349
MFS_SVOPL cd17442
Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; ...
148-484 3.57e-20

Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) or SVOP-like protein is a transporter-like protein that shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. It belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341000 [Multi-domain]  Cd Length: 375  Bit Score: 92.56  E-value: 3.57e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 148 STFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMpLELEWLDVE 227
Cdd:cd17442  42 TTMVFFGYMVFSILLGLLADRYGRWKILLLSFVWGAYFSLLTSFAPSYIWFVFLRCMVGCGVSGHSQGLI-IKTEFLPTK 120
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 228 HRTVAGVLSSTFWTGGVMLLALVGYLI---RDWRWLLLAVTLPCAPGILSLWWVPESA--RWLLTQGHVKEAHRYLLHCA 302
Cdd:cd17442 121 YRGYMLPLSQIFWLAGSLLIIGLASVViptLGWRWLIRFASIPGIILIVVFKFIPRTTlqIWVIWLGISFAYYGVILASS 200
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 303 RLNGRPVCEDSFSQEAVSKVAAGERvvRRPSYLDLFrtprlrhislccvvvwfgvnfsyyglsldvsglGLNVYQTQLLF 382
Cdd:cd17442 201 ELLERNLLCGSDPSDEEAGIKHIES--ESPCYCHMF---------------------------------NPSDYQTMIIS 245
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 383 GAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFgtrLLVSSDMKSWS-TVLAVMGKAFSEAAFTTAYLFTSELYPTVL 461
Cdd:cd17442 246 TLGEIALNPLNILGINFLGRRLSLVITMGLTAIFF---LLLNICTSSAGlTIFLFMLRALVSANFNTVYIYTAEVYPTTM 322
                       330       340
                ....*....|....*....|...
gi 90669191 462 RQTGMGLTALVGRLGGSLAPLAA 484
Cdd:cd17442 323 RALGMGTSGSLCRIGAMVAPFIS 345
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
149-481 7.10e-20

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 91.59  E-value: 7.10e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 149 TFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEH 228
Cdd:cd17371  41 TVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQLLILRALAGLGFGGEWAAGAALMAEYVPARH 120
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 229 RTVAGVLSSTFWTGGVMLLALVGYLI-------RDWRWLLLAVTLPCAPGILSLWWVPESARWlltqghvkEAHRyllhc 301
Cdd:cd17371 121 RGKALGYVQSGWAVGWLLATLLAALLfpllppeIAWRVLFLLGALPALLVLFIRRFVKEPPQW--------QAAR----- 187
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 302 arlngrpvcedsfsqeavskvAAGERVVRRPSYLDLFRtPRLRHISLCCVVVWFGVNFSYYGLS----------LDVSGL 371
Cdd:cd17371 188 ---------------------AARRHFADRPSLRELFS-PPLLRTTLLASLLATGALGGYYGITtwlpsyltgeRGLSFE 245
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 372 GLNVYQTQLLFGAVeLPSKLLVYLSVRYaGRRLTQAGTLLGTALAfgtrLLVSSDMKSWSTVLAVMGKA---FSEAAFTT 448
Cdd:cd17371 246 GSAGYLVVTILGGF-LGYLAGGFLADRI-GRRNNFALFALGSAIS----ILLYFFLPLSPTLILILGFPlgfFASGPFSG 319
                       330       340       350
                ....*....|....*....|....*....|...
gi 90669191 449 AYLFTSELYPTVLRQTGMGLTALVGRLGGSLAP 481
Cdd:cd17371 320 MGAYLTELFPTAVRATAQGFCYNVGRIIGALFP 352
MFS_SLC22A17_like cd17373
Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; ...
126-485 8.80e-20

Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; This group is composed of Solute carrier family 22, members 17, 23, and 31. They are members of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). SLC22A17 functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. SLC22A23 and SLC22A31 are orphan members of the SLC22 family. SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22A17-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340931 [Multi-domain]  Cd Length: 348  Bit Score: 90.65  E-value: 8.80e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 126 STIATESQWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLT 205
Cdd:cd17373   9 LVQNAVSKWDLVCDNGWKVHLEQFSLLLGLIFGYLILGCIADRFGRRPVLLFSLILILIFGLTVALAVSVTMFSTLRFLE 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 206 GSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCAPgILSLWWVPesARWL 285
Cdd:cd17373  89 GFCLAGIILTLYLLRLELCDPGKRLMITMVASLVAVAGQFLMPGLAALCRDWRVLQALIICPFLL-MLLYWSIF--PKNI 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 286 LTQGHVKEAHRYLLHCARLNGRPVCEDSFsqeavskvaagervvrrpsYLDLFRTPRLRHISLC--CVVVWFGVNFSYYG 363
Cdd:cd17373 166 LILGFNSLTGYGIRHCFARSMMGHEPENF-------------------YLDYYLTAGIAAVACVflCVTVDFLGRRGGLL 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 364 LSLDVSGLGlnvyqTQLLFGAVELPSKllvYLSVRYAGrrltqagtllgtalafgtrllVSSDMKSW-STVLAVMGKAFS 442
Cdd:cd17373 227 LFMILTGLA-----SLLLLGLLNLIGK---YSQHPDSG---------------------MSDSVKDKfSIAFSVLGLFAS 277
                       330       340       350       360
                ....*....|....*....|....*....|....*....|...
gi 90669191 443 EAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAAL 485
Cdd:cd17373 278 HAVGSLSVLFAAEVTPTVIRGGGLGLVLASGGLGMLTGPIIEL 320
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
151-472 1.85e-18

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 88.09  E-value: 1.85e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 151 FFAGVLVGAVAFGYLSDRFGRRRLLL----VAYVSTLVLGLASAASvSYVMFAITRTLTGSAlAGFTIIVMPLEL-EWLD 225
Cdd:cd17357  58 FFIGGAIGSFISAFLANRFGRKNGLLisnaLLVVSSLLMFLSKSAK-SPELLIFGRFLVGIA-CGLSTGFVPMYLqEISP 135
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 226 VEHRTVAGVLSSTFWTGGVMLLALVG--YLI---RDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLLh 300
Cdd:cd17357 136 SELRGALGSLTQIGVTLGILLGQVFGlpSVLgteTLWPYLLFFPGIPALLQLAALPFFPESPKFLLISKGDEEEAEKSL- 214
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 301 cARLNGRPVCEDSFSQEAVsKVAAGERVVRRPSYLDLFRTPRLRHISLCCVVVWFGVNFS------YYGLSLdVSGLGLN 374
Cdd:cd17357 215 -KFLRGIEDDVDQELEEIK-KESEQMGDQKQVSLMQLLRDPSLRLPLLLVLVVSASQQFSginaifFYSTFI-FENAGFS 291
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 375 VYQTQ---LLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALA-----FGTRLLVSSDMKSWSTVLAVMGKAFSeaaF 446
Cdd:cd17357 292 PQLAEwanLGIGIVNVLSTIVGPFLIEKVGRRPLLLISLSVCAVAlllmsVFLFLSEQNSWMSYGCIVAIFLFIFF---F 368
                       330       340       350
                ....*....|....*....|....*....|.
gi 90669191 447 TT-----AYLFTSELYPTVLRQTGMGLTALV 472
Cdd:cd17357 369 AIglgpiPWFIGAELFPQAPRSAAQSLGSSV 399
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
147-484 4.47e-18

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 86.08  E-value: 4.47e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 147 ASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDV 226
Cdd:COG2271  50 LASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFPP 129
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 227 EHRTVAGVLSSTFWTGGVMLLALVGYLI---RDWRWLLLAVTLPCAP-GILSLWWVpesarWLltqghvkeahryllhca 302
Cdd:COG2271 130 KERGRALGIFNAGGPLGGALAPPLLGWLlaaFGWRAAFLILGLPGLLlALLRFWLL-----AL----------------- 187
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 303 rlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlrhISLCCVVVWFGVNF-------SYYGLSLDVSGLGLNV 375
Cdd:COG2271 188 -------------------------------------------AYFLVYFALYGFLTwlptylvEVRGLSLAQAGLLLSL 224
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 376 YQTQLLFGAVelpskLLVYLSVRY-AGRRLTQAGTLLGTALAFGTRLLVSSDMksWSTVLAVMGKAFSEAAFTTAYLFTS 454
Cdd:COG2271 225 PFLAGIVGSL-----LGGWLSDRLgRRRKLVLAIGLLLAALALLLLALLPSPA--LAIALLFLAGFGLGGAFGLLWALAA 297
                       330       340       350
                ....*....|....*....|....*....|
gi 90669191 455 ELYPTVLRQTGMGLTALVGRLGGSLAPLAA 484
Cdd:COG2271 298 ELFPKKARGTASGLVNTFGFLGGALGPLLV 327
MFS_SLC22A17 cd17445
Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier ...
108-485 1.52e-17

Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier family 22, member 17 (SLC22A17) is also called 24p3 receptor (24p3R), lipocalin-2 receptor, or neutrophil gelatinase-associated lipocalin (NGAL) receptor (NGALR). It functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. LCN2 is a secreted protein of the lipocalin family that induces apoptosis in some types of cells and inhibits bacterial growth by sequestration of the iron-laden bacterial siderophore. Over-expressions of NGAL and NGALR have been found to be correlated with unfavorable clinicopathologic features and poor prognosis of patients with hepatocellular carcinoma. SLC22A17 is a member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341003 [Multi-domain]  Cd Length: 346  Bit Score: 84.06  E-value: 1.52e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 108 PATVPCSQGWEYDHSEFSSTIATeSQWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGL 187
Cdd:cd17445   3 TGVRHCDAGWNYTGLPGLTNNIV-TEWDLVCSRYWLVPLEQVCFILGFASGYLCLGYTADRLGRRRTLLLSLTLAVPFGV 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 188 ASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLP 267
Cdd:cd17445  82 LVAVAASPSLFMAMRFLLGAALAGVYLTLYLTRLELCDPPQRLLVAMAGGLTMVGGHFLLLGLALGCGSWRVLQGTITAP 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 268 CapgILSLWWVPESARWLLTQGHVKEAHRYLLHC---ARLNGRPVCEDSFSQEAVSKVAAGervvrrpsyldlfrtprlr 344
Cdd:cd17445 162 L---SLFLCYGCPGVKNLLILGFTTFIAHAISHCyqsFSDDVRGTPSTFYLSYLLSTGTAG------------------- 219
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 345 hisLCCVVVWFGVNfsyyglsldvsglglnvyqtqllfgavelpskllvylsvRYaGRR--LTQAGTLLGTA--LAFGtr 420
Cdd:cd17445 220 ---LACLFLCATVD---------------------------------------RF-GRRgiLLLAMTLTGIAslILLG-- 254
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 90669191 421 lLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAAL 485
Cdd:cd17445 255 -LMDYLNDAAIKTFSILGLFSSQAAASLSILFAAEVIPTVIRGSGLGLIMALGSLGGLSSPLMRL 318
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
152-366 9.81e-16

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 80.41  E-value: 9.81e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   152 FAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTV 231
Cdd:TIGR01299 212 YLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGE 291
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   232 AGVLSSTFWT-GGV----MLLALV-----------GYLIRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAH 295
Cdd:TIGR01299 292 HLSWLCMFWMiGGIyaaaMAWAIIphygwsfqmgsAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAW 371
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   296 RYL--LHCARLNGRPVCEDSFSQEAVSKVAAGERVVRRPS--------------------YLDLFR--TPRLRHISLCCV 351
Cdd:TIGR01299 372 MILklIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESdtgtwyqrcfvralsegggiWGNFLRcfNPEVREITIKLM 451
                         250
                  ....*....|....*
gi 90669191   352 VVWFGVNFSYYGLSL 366
Cdd:TIGR01299 452 GVWFTLSFGYYGLSV 466
MFS_SV2B cd17438
Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; ...
152-366 8.22e-15

Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2B is a key modulator of amyloid toxicity at the synaptic site and also has an essential role in the formation and maintenance of the glomerular capillary wall. SV2B belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340996 [Multi-domain]  Cd Length: 477  Bit Score: 76.89  E-value: 8.22e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 152 FAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTV 231
Cdd:cd17438  44 YLGMMAGAFIWGGLADKLGRKRCLIISLAINASFAFLSSFVQGYGAFLFCRLISGFGIGGSLPIVFAYFSEFLAREKRGE 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 232 AGVLSSTFW-TGGVMLLAL---------------VGYLIRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAH 295
Cdd:cd17438 124 HLSWLCMFWmIGGLYASAMawsiiphygwgfsmgTNYHFHSWRVFVIICALPCIASIIALKFMPESPRFLLEMGKHDEAW 203
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 90669191 296 RYL--LHCARLNGRPVCEDSFSqeaVSKVAagervvrrpsyldlfrtprlRHISLCCVVVWFGVNFSYYGLSL 366
Cdd:cd17438 204 MILknIHDTNMRAKGTPEKVFT---VSNIK--------------------RKNTLFLAVVWFTMAFSYYGLTV 253
MFS_SV2 cd17363
Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic ...
152-365 2.53e-14

Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. The SV2 family belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340921 [Multi-domain]  Cd Length: 474  Bit Score: 75.22  E-value: 2.53e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 152 FAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTV 231
Cdd:cd17363  44 YLGMMVGAFVWGGLADKLGRKQCLLIALSVNGVFAFLSSFVQGYGFFLFCRLLSGIGIGGSIPIVFSYFAEFLAREKRGE 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 232 AGVLSSTFW-TGGV----MLLALV-----------GYLIRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAH 295
Cdd:cd17363 124 HLSWLCMFWmIGGLyasaMAWAIIphygwgfsmgtAYQFHSWRVFVIVCALPSVASVVALTFMPESPRFLLEVGKHDEAW 203
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 90669191 296 RYL--LHCARLNGRPVCEDSFSqeaVSKVAagervvrrpsyldlfrtprlRHISLCCVVVWFGVNFSYYGLS 365
Cdd:cd17363 204 MILkqVHDTNMRAKGHPERVFT---VSHIK--------------------RMNTLFLAIVWFTMSFSYYGLT 252
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
122-472 2.54e-13

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 71.45  E-value: 2.54e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 122 SEFSSTIATESQWDLVCEQKGLNRAAstfFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAIT 201
Cdd:cd17315  17 NGALLYIAKDLGFGLSTSLQGLVVSS---LLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVG 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 202 RTLTGSALaGFTIIVMPLEL-EWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLI-----RDWRWLLLAVTLPCAPGILSL 275
Cdd:cd17315  94 RFLLGLGV-GLASVLVPLYIsEIAPAKIRGALGTLNQLMITFGILLAYLLGLALslsppGWWRLMFALAAVPALLQLLLM 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 276 WWVPESarwlltqghvkeahRYLLHCARLNGrpvcedsFSQeavskvaagervvrrpsyldlfrtprlrhisLCcvvvwf 355
Cdd:cd17315 173 FFLPES--------------RALLVGVGLQL-------LQQ-------------------------------LT------ 194
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 356 GVN-FSYYGLS-LDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTA-----LAFGTRLLVSSDMK 428
Cdd:cd17315 195 GINaVMYYAPTiFKSAGGGTASILASIIVGVVNLLATLVAIRLVDKVGRRPLLLIGFAGMAaslllLAIAFLLPALAKAA 274
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*.
gi 90669191 429 SWSTVLAVMG--KAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALV 472
Cdd:cd17315 275 GWLALLGILLyiAAFAMGAGPVPWLLLSEIFPLRIRGKGMAIATLV 320
MFS_SV2A cd17439
Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; ...
152-366 2.63e-13

Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. It is unclear how SV2A is involved in correct SV function, but it has been suggested to either act as a transporter or a regulator of exocytosis by mediating Ca2+ dynamics. SV2A has been identified as the molecular target of the antiepileptic drug levetiracetam (LEV). Its expression is decreased in patients with epilepsy and in epileptic animal models. SV2A belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340997 [Multi-domain]  Cd Length: 478  Bit Score: 71.98  E-value: 2.63e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 152 FAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTV 231
Cdd:cd17439  44 YLGMMVGAFLWGGLADRIGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGE 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 232 AGVLSSTFWT-GGVMLLALV---------------GYLIRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAH 295
Cdd:cd17439 124 HLSWLCMFWMiGGIYASAMAwaiiphygwsfqmgsAYQFHSWRVFVLVCAFPSVFAIGALTTMPESPRFFLENGKHDEAW 203
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 90669191 296 RYL--LHCARLNGRPVCEDSFSQEAVSkvaagervvrrpsyldlfrtprlRHISLCCVVVWFGVNFSYYGLSL 366
Cdd:cd17439 204 MVLkqVHDTNMRAKGHPERVFSVTHIK-----------------------RRITLMMMAVWFTMSFSYYGLTV 253
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
154-290 2.92e-13

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 71.44  E-value: 2.92e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 154 GVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVmPLEL-EWLDVEHRTVA 232
Cdd:cd17359  48 GAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGGLAVGGASALV-PMYIaEVAPAEIRGRL 126
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 90669191 233 GVLSSTFWTGGVMLLALVGYLIRD-----------WRWLLLAVTLPCAPGILSLWWVPESARWLLTQGH 290
Cdd:cd17359 127 VSLNQLMIVFGQLLAYIVNYLIANaggadwlgaegWRWMLGLEAIPAILFLLGMLFIPESPRWLVSKGK 195
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
151-286 4.98e-13

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 69.84  E-value: 4.98e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 151 FFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRT 230
Cdd:COG0477  58 YLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLAPSPELLIAARALQGIGAGGLMPGALALIAELFPARERG 137
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 90669191 231 VAGVLSSTFWTGGVMLLALVGYLIRD---WRWLLLAVTLPCAPGILSLWWVPESARWLL 286
Cdd:COG0477 138 RALGLWGAAIGLGLALGPLLGGLLVAalgWRWIFLINAPLGLLALVLRLRLPESRGLLL 196
MFS_SLC22A23 cd17444
Solute carrier family 22, member 23 of the Major Facilitator Superfamily; Solute carrier ...
132-278 1.20e-12

Solute carrier family 22, member 23 of the Major Facilitator Superfamily; Solute carrier family 22, member 23 (SLC22A23) is an orphan member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It is abundantly expressed in brain and is also found in liver. Single-nucleotide polymorphisms in SLC22A23 are associated with inflammatory bowel disease (IBD) in a Canadian white population. SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A23 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341002 [Multi-domain]  Cd Length: 364  Bit Score: 69.49  E-value: 1.20e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 132 SQWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAG 211
Cdd:cd17444  26 SKWDLVCDSSWKVHIAKFSLLVGLIFGYLITGCLADWFGRRPVLLFSVVFILIFGLTVALSVNVTMFSTLRFFEGFCLAG 105
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 90669191 212 FTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCAPgILSLWWV 278
Cdd:cd17444 106 IILSLYALRIELCPPGHRFMITMVASFIAMAGQFLMPGLAALCRDWQVLQAVIICPFLL-MLSYWCI 171
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
140-484 1.36e-12

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 69.52  E-value: 1.36e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 140 QKGLnrAASTFFFAGVLvGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPL 219
Cdd:COG2223  41 QLGL--LFAIPVLVGAL-LRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGIGGGGSFAVGIAL 117
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 220 ELEWLDVEHR-TVAGVLSSTFWTGGVMLLALVGYLIR--DWRWLLLAVTLPCAPGILSLWWvpesarwlltqghvkeahr 296
Cdd:COG2223 118 VSKWFPPDRRgLALGLAAGGGNLGAAVAAFLAPLLIAafGWRNAFLILGILLLVVAVLAWL------------------- 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 297 yllhcarlngrpvcedsFSQEAVSKVAAGERVVRRpSYLDLFRTPRLRHISLCCvvvwFGVNFSYYGLSLDVSGLGLNVY 376
Cdd:COG2223 179 -----------------FLRDPPAGAAAAAKASLR-DQLEALRDPRFWLLSLLY----FGTFGSFIGFSSWLPPYLVDQF 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 377 QTQL--------LFGAVELPSKLLV-YLSVRYAGRRLTQAGTLLGTALAFGtrLLVSSDMKSWSTVLAVMGKAFSEAAFT 447
Cdd:COG2223 237 GLSAatagllaaLFALLGALGRPLGgWLSDRIGGRRVLLIVFALMALGLLL--LALALGSLWLFLVLFLLLGLALGGGNG 314
                       330       340       350
                ....*....|....*....|....*....|....*..
gi 90669191 448 TAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAA 484
Cdd:COG2223 315 AVFALVPDIFPTKNAGAVYGLVGAAGGLGGFLGPLLF 351
MFS_GLUT8_Class3 cd17433
Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
143-471 1.42e-12

Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 8 (GLUT8) is also called Solute carrier family 2, facilitated glucose transporter member 8 (SLC2A8) or glucose transporter type X1 (GLUTX1). It is classified as a Class 3 GLUT protein and is an insulin-regulated facilitative glucose transporter predominantly expressed in testis and brain. It can also transport fructose and galactose. SLC2A8 knockout mice were viable, developed normally, and display only a very mild phenotype, including mild alterations in the brain (increased proliferation of hippocampal neurons), heart (impaired transmission of electrical wave through the atrium), and sperm cells (reduced number of motile sperm cells). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340991 [Multi-domain]  Cd Length: 416  Bit Score: 69.52  E-value: 1.42e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 143 LNRAASTFFFAGVLVGAVAFG----YLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSAlAGFTIIVMP 218
Cdd:cd17433  38 LDDAAASWFGSVVTLGAAAGGvlggWIVDRAGRKLSLMLCSVPFIAGFTVITAAQNVWMLYVGRLLTGLA-SGVTSLVVP 116
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 219 LELEwlDVEHRTVAGVLSSTFWTGGV--MLLALVGYLIRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAH- 295
Cdd:cd17433 117 VYIS--EIAHPRVRGTLGSCVQLMVVigIMGAYLAGLVLDWRWLAVLGSIPPTLMLLLMCFMPETPRFLLTQHRRQEAMa 194
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 296 --RYLL--------HCARLngrpvcEDSFSQEAVSKVAAgerVVRRPSyldlFRTPRLRHISLCCVVVWFGVN-FSYYGL 364
Cdd:cd17433 195 alRFLRgpdqgwewECIGI------EQSFHLEEQSFSLA---LLKQPG----IYKPLIIGVSLMAFQQLTGINaVMFYAE 261
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 365 SL-------DVSGLGLNVYQTQLLFGAVelpskllVYLSVRYAGRRLTQagTLLGTALAFGTRLLvssdmkSWstvLAVM 437
Cdd:cd17433 262 TIfeeakfkDSSVASVIVAAIQVLFTAV-------AALIMDRAGRKVLL--VLSGVVMVFSTAAF------GW---LAVG 323
                       330       340       350
                ....*....|....*....|....*....|....*....
gi 90669191 438 GKAFSEAAFT-----TAYLFTSELYPTVLRQTGMGLTAL 471
Cdd:cd17433 324 SMGFFIAGFAvgwgpIPWLVMSEIFPLHVRGVASGICVL 362
MFS_GLUT_Class2 cd17432
Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
148-344 2.77e-12

Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT5, also called Solute carrier family 2, facilitated glucose transporter member 5 (SLC2A5), is a well-established fructose transporter found in the small intestine. GLUT7 (or SLC2A7) is a high-affinity glucose and fructose transporter expressed in the small intestine and colon. GLUT9 (or SLC2A9) transports urate and fructose, and is most strongly expressed in the basolateral membranes of proximal renal tubular cells, liver and placenta. It may play a role in urate reabsorption by proximal tubules. GLUT11 (or SLC2A11) is a facilitative glucose transporter expressed in heart and skeletal muscle. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340990 [Multi-domain]  Cd Length: 452  Bit Score: 68.80  E-value: 2.77e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 148 STFFFAGvLVGAVAFGYLSDRFGRRRLLLV----AYVSTLVLGLASAASvSYVMFAITRTLTGsALAGFTIIVMPLELEW 223
Cdd:cd17432  57 SIFPLGG-LFGSLLVGPLVIRLGRKGTLLLnnifAIVAAILMGLSKIAK-SFEMIIVGRFLVG-INAGISLNVVPMYLGE 133
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 224 LDVEH-RTVAGVLSSTFWTGGVMLLALVGY---LIRDWRW-LLLAVT-LPCAPGILSLWWVPESARWLLTQGHVKEAHRY 297
Cdd:cd17432 134 SAPKNlRGAVGLVPAIFITLGILLGQVLGLrelLGNEEGWpLLLALTgVPALLQLLTLPFFPESPRYLLIEKGDEEAARK 213
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 90669191 298 LLHcaRLNGRPVCEDSFsqEAVSKVAAGERVVRRPSYLDLFRTPRLR 344
Cdd:cd17432 214 ALQ--RLRGKEDVDDEM--EEMLEEQRAEKGVGTVSVLELFRDRSVR 256
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
142-484 2.98e-12

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 68.00  E-value: 2.98e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 142 GLNRAASTFFFA----GVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVM 217
Cdd:cd17365  30 GLSPAQLGPVGSaalfGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLGLGAAMPNAI 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 218 PLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRD---WRWLLLA------VTLPCAPGILSLWWVpesarwlltq 288
Cdd:cd17365 110 TLVSEYAPARRRSLAVTLMFCGYPLGAALGGFLAAALIPafgWRSVFLLggvpplILLPLLRGTLLLWVT---------- 179
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 289 ghvkeahryllhcarlngrpvcedsfsqeavskvaagervvrrpsyldlfrtprlrhiSLCCVVVWFGVN------FSYY 362
Cdd:cd17365 180 ----------------------------------------------------------FFMGLLLVYLLNswlpklMVEA 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 363 GLSLDVSGLGLNVYQTQLLFGAVelpskLLVYLSVRYAGRRLTQAGTLLGTALAFGtrLLVSSDMKSWSTVLAVMGKAFS 442
Cdd:cd17365 202 GYSLSQALTITLLLNIGGVIGSL-----LLGWLADRFGPKRVLALFFALGAVSLAL--LGVSPASLVLLYVLVFLAGACV 274
                       330       340       350       360
                ....*....|....*....|....*....|....*....|..
gi 90669191 443 EAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAA 484
Cdd:cd17365 275 NGAQVGLYALAARFYPTEVRATGVGWALGVGRLGAILGPLLG 316
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
151-484 1.62e-11

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 66.06  E-value: 1.62e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 151 FFAGVLVGAVAFGYLSDRFGRRRLLLvayVSTLVLGLAS---AASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVE 227
Cdd:cd17325  40 YALAQLLFSPPAGRLSDRFGRKRLLL---LGLLLLAVSTllfAFATSYWQLLLARFLQGLASAAVWPAAMALIADIAPPE 116
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 228 HRTVAGVLSSTFWTGGVMLLALVG---YLIRDWRWLLLAVT-LPCAPGILSLWWVPESARwlltqghvkeahryllhcar 303
Cdd:cd17325 117 ERGRAMGIFSSAIGLGFLIGPLLGgllADALGYRAPFLVCAaLALLALVLALLLLPEPRP-------------------- 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 304 lngrpvcedsfsqeaVSKVAAGERVVRRPSYLDLFRTPRLRHISLCCVVVWFGVNFSYYGLSLDVSGL-GLNVYQTQLLF 382
Cdd:cd17325 177 ---------------PPNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLPLYAAELgGLSPAQIGLLF 241
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 383 GAVELPSKLLVYLSVRYA---GRRLTQAGTLLGTALAFGTrLLVSSDMKSWSTVLAVMGKAFSeAAFTTAYLFTSELYPT 459
Cdd:cd17325 242 GAQGLASALSQPPAGKLSdriGRKPLILIGLLLSAVALLL-LPLATSFWLLLLLLALLGLGLG-LVFPATLALLADIVPP 319
                       330       340
                ....*....|....*....|....*
gi 90669191 460 VLRQTGMGLTALVGRLGGSLAPLAA 484
Cdd:cd17325 320 EGRGTAMGLFNTAFSLGMVLGPLLG 344
MFS_SV2C cd17440
Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; ...
152-366 7.40e-11

Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2C exhibits enriched expression in several basal ganglia nuclei, and has been found to be involved in normal operation of the basal ganglia network and could be also be involved in system adaptation in basal ganglia pathological conditions. SV2C belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340998 [Multi-domain]  Cd Length: 479  Bit Score: 64.55  E-value: 7.40e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 152 FAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTV 231
Cdd:cd17440  44 YLGMMVGAFFWGGLADKVGRRQSLLICMSVNGFFAFLSSFVQGYGLFLFCRLLSGFGIGGAVPTVFSYFAEVLAREKRGE 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 232 AGVLSSTFWT-GGV----MLLALV-----------GYLIRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAH 295
Cdd:cd17440 124 HLSWLCMFWMiGGIyasaMAWAIIphygwsfsmgsAYQFHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAW 203
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 90669191 296 RYL--LHCARLNGRPVCEDSFSQEAVSKVAagervvrrpsyldlfrtprlrhiSLCCVVVWFGVNFSYYGLSL 366
Cdd:cd17440 204 MILkqIHDTNMRARGQPEKVFTVNRIKKDN-----------------------TIKLTIVWLTLSFGYYGLSV 253
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
149-484 1.45e-10

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 62.95  E-value: 1.45e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 149 TFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEH 228
Cdd:cd17324  41 SAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAHGGFWAIAAAYAADLVPPEK 120
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 229 RTVA-GVLSSTFWTG---GVMLLALVGYLIrDWRWLLLAVTLPCAPGILSLWwvpesaRWLLTQGHVKEAHRYLLHcarl 304
Cdd:cd17324 121 RGRAiGLVFSGLTLGlvlGRPLGGLLGQLL-GWRAAFLAIAVLALLAALLLW------RLLPSLPPKKPGSLGLLS---- 189
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 305 ngrpvcedsfsqeavskvaagervvrrpSYLDLFRTPRLRHISL--CCVVVWFGVNFSYYGLSLdVSGLGLNVYQTQLLF 382
Cdd:cd17324 190 ----------------------------SLLLLLRNPRLRLAYLitFLLFGGFFALYTYLAPFL-TDVPGFSSSAIIGLL 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 383 GAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMKSWSTVLA--VMGKAFSeAAFTTAYLFTSELYPTV 460
Cdd:cd17324 241 LLFGVAGVVGSPLAGRLADRGGRRALLIALLLLAAALLLLTLLGPSPLLLLVGlvLWGLGFF-AAHSALQTRVLRLAPEA 319
                       330       340
                ....*....|....*....|....
gi 90669191 461 lRQTGMGLTALVGRLGGSLAPLAA 484
Cdd:cd17324 320 -RGLASSLYLAAYNLGGALGAALG 342
MFS_GLUT_Class1 cd17431
Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
151-472 2.48e-09

Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-4 are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT1, also called solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1), displays broad substrate specificity and can transport a wide range of pentoses and hexoses including glucose, galactose, mannose, and glucosamine. It is found in the brain, erythrocytes, and in many fetal tissues. GLUT2 (or SLC2A2) is found in the liver, islet of Langerhans, intestine, and kidney, and is the isoform that likely mediates the bidirectional transfer of glucose across the plasma membrane of hepatocytes and is responsible for uptake of glucose by beta cells. GLUT3 (or SLC2A3) is found in the brain and can mediates the uptake of glucose, 2-deoxyglucose, galactose, mannose, xylose and fucose, and dehydroascorbate. GLUT4 (or SLC2A4) is an insulin-regulated facilitative glucose transporter found in adipose tissues, and in skeletal and cardiac muscle. GLUT14 (or SLC2A14) is an orphan transporter expressed mainly in the testis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340989 [Multi-domain]  Cd Length: 445  Bit Score: 59.66  E-value: 2.48e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 151 FFAGVLVGAVAFGYLSDRFGRRRLLLV----AYVSTLVLGLASAASvSYVMFAITRTLTGsALAGFTIIVMPLEL-EWLD 225
Cdd:cd17431  59 FSVGGMIGSFSVGLFVNRFGRRNSMLYnnllAFAGAALMGLSKLAK-SYEMLILGRFIIG-LYCGLTTGLVPMYIgEISP 136
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 226 VEHRTVAGVLSSTFWTGGVML---LALVGYLIRDWRW-LLLAVTLpcAPGILS---LWWVPESARWLL-TQGHVKEAHRY 297
Cdd:cd17431 137 TALRGALGTLHQLGIVVGILIsqiFGLEFILGTEELWpLLLGFTI--VPAILQlalLPFCPESPRYLLiNRNEEEEAKSV 214
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 298 LlhcARLNG-RPVCEDSFSQEAVSKVAAGErvvRRPSYLDLFRTPRLRHISLCCVVVWFGVNFS------YYGLSL-DVS 369
Cdd:cd17431 215 L---KKLRGtTDVSEDIQEMKEESRQMMRE---KKVTILELFRSSSYRQPIIIAIVLQLSQQLSginavfYYSTSIfEKA 288
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 370 GLGLNVYQTqLLFGAVELPSKLLVYLSVRYAGRR-LTQAGtLLGTAL--AFGTRLLVSSDMKSWSTVLAvMGKAFSEAAF 446
Cdd:cd17431 289 GVQQPVYAT-IGAGVVNTIFTVVSLFLVERAGRRtLHLIG-LGGMAIcaILMTIALLLLEGYPWMSYVS-IVAIFGFVAF 365
                       330       340       350
                ....*....|....*....|....*....|..
gi 90669191 447 ------TTAYLFTSELYPTVLRQTGMGLTALV 472
Cdd:cd17431 366 feigpgPIPWFIVAELFSQGPRPAAMAVAGFS 397
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
153-284 1.00e-08

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 57.28  E-value: 1.00e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 153 AGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALaGFTIIVMPLEL-EWLDVEHRTV 231
Cdd:cd17360  46 AGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVGLGV-GIASMTVPLYIaEAAPPRIRGR 124
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 90669191 232 AGVLSSTFWTGGVMLLALVG----YLIRDWRWLLLAVTLPCAPGILSLWWVPESARW 284
Cdd:cd17360 125 LVTINVLFITGGQFVAYVINgafsYLPGGWRWMLGLAAVPAVLQFIGLLFLPESPRW 181
MFS_GLUT6_Class3 cd17434
Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
143-477 1.20e-08

Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 6 (GLUT6) is also called Solute carrier family 2, facilitated glucose transporter member 6 (SLC2A6). It is classified as a Class 3 GLUT protein, and is a facilitative glucose transporter that binds cytochalasin B with low affinity. It is found in the brain, spleen, and leucocytes. GLUT6 may function in oxalate secretion. SLC2A6 has been identified as an oxalate nephrolithiasis gene in mice; its deletion causes spontaneous calcium oxalate nephrolithiasis in the setting of hyperoxalaemia, hyperoxaluria, and nephrocalcinosis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340992 [Multi-domain]  Cd Length: 417  Bit Score: 57.15  E-value: 1.20e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 143 LNRAASTFFFAGVLVGAVAFG----YLSDRFGRRRLLLVAYVSTlVLGLASAASVSYV-MFAITRTLTGSAlAGFTIIVM 217
Cdd:cd17434  38 LNVHQISWFGSVFTLGAAAGGlsamFLNDRLGRKLSIMFSAVPS-ALGYLLMGSAQGIwMLLLGRFLTGFA-GGITAASI 115
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 218 PLELEwlDVEHRTVAGVLSST---FWTGGVMLLALVGyLIRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEA 294
Cdd:cd17434 116 PVYVS--EISHPGVRGALGACpqiMAVFGSLALYALG-LLLPWRWLAVAGEVPVVIMILLLCFMPNSPRFLISKGKDEKA 192
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 295 HRYLlhcARLNGRPV--------CEDSFSQEA--VSKVAAGERVVRRPSYLDLFRTPRLRHISLCCVVVWFGVNFsyygl 364
Cdd:cd17434 193 LKAL---AWLRGPNTdymtefeqIKDNIRKQSsrLSWAELKTPSYYKPILIAVVMRFLQQLTGITPILVYLEPIF----- 264
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 365 slDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRL---TQAGTLLGTALAFGTRLLVssdmkswSTVLAVMGKAF 441
Cdd:cd17434 265 --HLTAVILEPKYDAALVGAVRLLSVAIAASLMDKAGRKIllfTSAFLMFAANLSMGLIPLI-------AAMLFIMGYAM 335
                       330       340       350
                ....*....|....*....|....*....|....*.
gi 90669191 442 SEAAFTtaYLFTSELYPTVLRQTGMGLTALVGRLGG 477
Cdd:cd17434 336 GWGPIT--WLLMSEILPLKARGVASGLCVVVSWITA 369
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
150-286 3.00e-08

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 56.10  E-value: 3.00e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 150 FFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASV-SYVMFAITRTLTGSALAGFTIIVMPLELEwldVEH 228
Cdd:cd17356  53 IVNLGSFFGALISSFLSDRIGRKKSIQIGCVIYIIGAIIQVAAIgKWYQLIVGRIIAGLGVGFASVLVPVYQSE---VAP 129
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 90669191 229 RTVAGVLSSTF---WTGGVMLLALVGYLIRDWR---WLLLAVTLPCAPGIL---SLWWVPESARWLL 286
Cdd:cd17356 130 KHIRGTLVSLYqlaITIGILVAYCINYGTHKLDgsaQWRIPLGLQIVWGLLlliGMFFLPESPRWLY 196
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
147-279 3.21e-08

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 55.65  E-value: 3.21e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 147 ASTFFFAGVLVGAVAFGYLSDRFGRRR--LLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWL 224
Cdd:COG2271 221 LLSLPFLAGIVGSLLGGWLSDRLGRRRklVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELF 300
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 90669191 225 DVEHR-TVAGVLSSTFWTGGVMLLALVGYLIR--DWRWLLLAVTLPCAPGILSLWWVP 279
Cdd:COG2271 301 PKKARgTASGLVNTFGFLGGALGPLLVGYLLDatGYQAAFLLLAALALLAALLALLLL 358
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
154-283 7.96e-08

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 54.50  E-value: 7.96e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 154 GVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRT-VA 232
Cdd:cd17473  47 FIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGIGVAGIMTLATALIGDYFEGEERAkML 126
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 90669191 233 GVLSSTFWTGGVMLLALVGYLIR-DWRW--LLLAVTLPCAPgiLSLWWVPESAR 283
Cdd:cd17473 127 GLQSAAMSLGGVVFLLLGGALAEiGWRApfLVYLLALPVLI--LVLLFLPEPAR 178
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
146-276 1.40e-07

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 53.71  E-value: 1.40e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 146 AASTFFFAGVlVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAAS---VSYVMFAITRTLTGSALAgfTIIVMPLEle 222
Cdd:cd17478 235 LLSLFLFAGA-IGTLIGGPLSDRFGRRRVIIASLLLAAPFLLLFLLTpgiWSYILLVLAGFLLFASFP--VTVVLAQE-- 309
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 90669191 223 wLDVEHRTVAGVLSSTF-WTGGVMLLALVGYLIRDW--RWLLLAVTLPCAPGILSLW 276
Cdd:cd17478 310 -LLPGNVGLASGLMMGLsFGLGGIGAPVLGALADAFglESVLLILALLPLLGALLAF 365
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
151-484 2.13e-07

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 53.34  E-value: 2.13e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 151 FFAGVLVGAVA---FGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVE 227
Cdd:cd17474  40 ITAFTLPAAVLmpvAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLAGRALQGIGAAGLGPLALTLIGDLFEGG 119
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 228 HRTVAGVLSSTFWTGGVMLLALVGYLIR--DWRWLLLAVTLPCAPGILS-LWWVPESARwlltqghvkeahryllhcarl 304
Cdd:cd17474 120 ERAKAMGLYEAALGLGIAVGPLLGGLLAaiSWRYPFFLLAALIPVAFLAiLFLLPEPKE--------------------- 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 305 ngrpvcedsfsqEAVSKVAAGERVVRRpsyldLFRTPRLRHISL--CCVVVWFGVNFSYYGLSLDVSgLGLNVYQTQLLF 382
Cdd:cd17474 179 ------------KAKSSSATKLRDLKK-----ALRGRGLLTFLVsaFLYFFLYFAFLTYLPFLLELL-YGISPIIIGLLF 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 383 G----AVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGtrLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYP 458
Cdd:cd17474 241 AgwsvLLALGSLFVGRLLKKRFGARRILVIGLLLYALSLL--LLGFVPSLALLLIAIVLFGLGLGLNLPLLTTLVTELAP 318
                       330       340
                ....*....|....*....|....*.
gi 90669191 459 TVLRQTGMGLTALVGRLGGSLAPLAA 484
Cdd:cd17474 319 EEERGTASSLYNFVRFLGQAVGPLLF 344
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
157-484 2.16e-07

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 53.34  E-value: 2.16e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 157 VGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLS 236
Cdd:COG2807  68 LFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGAGIAVGNVLLPGLIKRWFPDRVGLMTGLYT 147
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 237 STFWTGGVMLLALVGYLIR--DWRWLLLAVTLPCAPGILSLWWVpesarwlltqghvkeahryllhcarlngrpvcedsf 314
Cdd:COG2807 148 AAMGLGAALAAGLTVPLAAalGWRGALAVWALLALLALLLWLPL------------------------------------ 191
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 315 sqeAVSKVAAGERVVRRPSYLDLFRTPRLRHISLC---------CVVVWFGVNFSYYGLSLDVSGLGLnvyqtqLLFGAV 385
Cdd:COG2807 192 ---LRRRPAAAAAAPAAASLRSLWRSPLAWLLTLFfglqsllyyAVVAWLPPILRDAGLSAATAGLLL------SLFQLA 262
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 386 ELPSKLLV-YLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSdmkSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVlRQT 464
Cdd:COG2807 263 GIPGSLLVpLLADRLGDRRPLLLLLGLLGLAGLLGLLLAPG---SLPWLWAVLLGLGQGGLFPLALTLIGLRARTP-AEA 338
                       330       340
                ....*....|....*....|..
gi 90669191 465 G--MGLTALVGRLGGSLAPLAA 484
Cdd:COG2807 339 AalSGMAQSVGYLLAALGPLLV 360
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
149-482 2.29e-07

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 52.93  E-value: 2.29e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 149 TFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALaGFTIIVMPLELewLDVEH 228
Cdd:COG0738  50 FAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALAPSYPLLLLALFLLGLGL-GLLDVAANPYV--AALGP 126
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 229 RTVAGVLSST--FWTGGVMLLALVG-YLIR-----DWRWLLLAVTLPCAPGILSLWWVPesarwlltqghvkeahryllh 300
Cdd:COG0738 127 ETAASRLNLLhaFFSLGALLGPLLGgLLILlglslSWHLPYLILAVLLLLLALLFLRSK--------------------- 185
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 301 carlngRPVCEDsfsqeavskvAAGERVVRRPSYLDLFRTPRLRHISLCC-------VVVW-FGVNF--SYYGLSLDVSG 370
Cdd:COG0738 186 ------LPEIEE----------EEEEAAGSAASLKSLLKNPRLLLGGLAIflyvgaeGAIGdWLPLYlkDVLGLSEATAA 249
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 371 LGLNVYQTQLLFGAVelpskLLVYLSVRYAGRRLTQAGTLLGTALAFGTrLLVSSdmkSWSTVLAVMGKAFSEAA-FTTA 449
Cdd:COG0738 250 LGLSLFWGGMTIGRF-----LGGFLLKRFGPVRLLRLSALLAAVGLLLA-LLAPG---PWLALIGLALVGLGLSLmFPTI 320
                       330       340       350
                ....*....|....*....|....*....|...
gi 90669191 450 YLFTSELYPTvLRQTGMGLTALVGRLGGSLAPL 482
Cdd:COG0738 321 FSLALDGLGK-RTAAAVSAVLIMGIVGGAIGPP 352
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
136-284 3.10e-07

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 52.74  E-value: 3.10e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 136 LVCEQKGLNRAASTFffaGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALaGFTII 215
Cdd:cd17362  36 LSSLQSGLVVSGSLL---GALLGSLVAGALIDRLGRRKELILAALLYLVGSLVTGLAPSYPVLLVGRLIYGVGI-GLAMH 111
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 90669191 216 VMPLEL-EWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRD----WRWLLLAVTLPCAPGILSLWWVPESARW 284
Cdd:cd17362 112 AAPVYIaETSPSHIRGLLVSLKELFIVLGILLGYVSGYAFADvvggWRYMYGLAAPPALLLGIGMWFLPPSPRW 185
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
146-283 5.84e-07

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 51.81  E-value: 5.84e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 146 AASTFFFAGVLVGAVA---FGYLSDRFGRRRLLLVAY-VSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLEL 221
Cdd:COG2223 242 TAGLLAALFALLGALGrplGGWLSDRIGGRRVLLIVFaLMALGLLLLALALGSLWLFLVLFLLLGLALGGGNGAVFALVP 321
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 90669191 222 EWLDVEHR-TVAGVLSSTFWTGGVMLLALVGYLIR---DWRWLLLAVTLPCAPGILSLWWVPESAR 283
Cdd:COG2223 322 DIFPTKNAgAVYGLVGAAGGLGGFLGPLLFGALLDatgSYTAAFLVFAVLALVALVLTLLLYRRPR 387
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
139-484 8.11e-07

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 51.50  E-value: 8.11e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  139 EQKGLNRAASTFffaGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMP 218
Cdd:PRK11551  50 AQMGWAFSAGIL---GLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIA 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  219 LELEWLDVEHRTVA-GVLSSTFWTGGVM--LLALVGYLIRDWR---WLLLAVTLPCAPgiLSLWWVPESARWLLTQGHVK 292
Cdd:PRK11551 127 LTSEAVGPRLRGTAvSLMYCGVPFGGALasVIGVLAAGDAAWRhifYVGGVGPLLLVP--LLMRWLPESRAFAQAAGAGK 204
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  293 EAHryllhcarlngrPVCEDSFSQEavskvaagervvRRPSYLDLFrtprlrhISLCC--VVVWFGVNFsyygLSLDVSG 370
Cdd:PRK11551 205 QRA------------PVLRALFGEG------------RATATLLLW-------ISYFFtlIVLYFLLNW----LPSLLVG 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  371 LGLNVYQT---QLLF---GAVelpSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMksWSTVLAVMGKAFSEA 444
Cdd:PRK11551 250 QGLSRSQAglvQIAFnigGAL---GSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFA--GMLLAGFAAGLFVVG 324
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 90669191  445 AFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAA 484
Cdd:PRK11551 325 GQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLA 364
2_A_01_02 TIGR00880
Multidrug resistance protein;
153-281 8.64e-07

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 48.41  E-value: 8.64e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   153 AGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVA 232
Cdd:TIGR00880   9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVA 88
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 90669191   233 GVLSSTFWTGGVMLLALVGYLIRD---WRWLLLAVTLPC-APGILSLWWVPES 281
Cdd:TIGR00880  89 LGLMSAGIALGPLLGPPLGGVLAQflgWRAPFLFLAILAlAAFILLAFLLPET 141
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
146-486 1.12e-06

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 51.06  E-value: 1.12e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 146 AASTFFFAGVLVGAVA---FGYLSD----RFGRRRLLLVayVSTLVLGLASAA---------SVSYVMFAITRTLTGSAL 209
Cdd:COG2211  47 LVGLILLVARLWDAITdplIGALSDrtrtRWGRRRPWIL--IGAIPLALSFVLlftapdlspTGKLIYALVTYLLLGLAY 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 210 AGFTIIVMPLELEWL-DVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDW------RWLLLAVTLPCAPGILSLWWVpesa 282
Cdd:COG2211 125 TLVNIPYSALGAELTpDYEERTRLSSWRFAFAGLGGLLASVLPPPLVAAfggdaaLGYRLTALIFAVLGLLAFLLT---- 200
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 283 rWLLTQGHVkeahryllhcarlngrpvcedsfsqeavskVAAGERVVRRPSYLDLFRTPRLRHISLCCVVVWFGVN---- 358
Cdd:COG2211 201 -FFGTKERP------------------------------VPEEEKVSLKESLKALLKNRPFLLLLLAYLLFFLALAlvaa 249
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 359 -FSYY-----GLSLDVSGLGLNVYQTQLLFGAVelpskLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMKSWST 432
Cdd:COG2211 250 lLLYYfkyvlGLSAALVGLLLALYFLAALLGAP-----LWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLGPGNLWLLLV 324
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 90669191 433 VLAVMGKAFSeAAFTTAYLFTSEL-----YPTVLRQTG--MGLTALVGRLGGSLAPLAALL 486
Cdd:COG2211 325 LAALAGIGLG-AILVLPWAMLADVvdydeWKTGRRREGlyFGIFTFAIKLGQALAGALAGL 384
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
147-279 1.20e-06

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 50.65  E-value: 1.20e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 147 ASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDV 226
Cdd:cd17319  43 IASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVAEAGFFPGAIKALAEWFPA 122
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 90669191 227 EHRTVAGVLSSTFWTGGVMLLA-LVGYLI--RDWRWLLLAVTLP-CAPGILSLWWVP 279
Cdd:cd17319 123 RERGRATGLFNSGAPLGAAIGPpLSGWLLllFGWRWAFIIEGLLgLLLAVLWWFYLR 179
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
149-287 1.40e-06

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 50.63  E-value: 1.40e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 149 TFFFAGVLVgavAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEH 228
Cdd:cd17321  41 LLAFAALLL---LAGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARALQGIGAAAIMPASLALIAATFPGER 117
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 90669191 229 RTVA-GVLSSTFWTGGVMLLALVGYLIR--DWRWLLLaVTLPcaPGILSLWWVPESARWLLT 287
Cdd:cd17321 118 RGRAlGLWGAVVGIGAALGPLLGGLLLElfGWRWIFL-INVP--IGLVALLLARTFSGAVLA 176
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
149-277 2.81e-06

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 49.50  E-value: 2.81e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 149 TFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEH 228
Cdd:cd17325 242 GAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLVFPATLALLADIVPPEG 321
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 90669191 229 RTVAGVLSSTFWTGGVMLLALVGYLIRD---WRWLLLAVTLPCAPGILSLWW 277
Cdd:cd17325 322 RGTAMGLFNTAFSLGMVLGPLLGGFLYDafgFATPFLAAAALLLLAAVLFLL 373
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
146-280 5.64e-06

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 48.74  E-value: 5.64e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 146 AASTFFFAGVLVGAVAfGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLD 225
Cdd:cd17489  36 VVGLFTLAALLARPFA-GRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIGWGAFTTAAATLVADIIP 114
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 90669191 226 VEHRTVAGVLSSTFWTGGVMLLALVGYLIRDW---RWLLLAVTLPCAPGILSLWWVPE 280
Cdd:cd17489 115 PSRRGEGIGYYGLATTLAMALGPALGLFLYQHlgfAVLFIVAAVLALLALLLVFLVKD 172
xylE PRK10077
D-xylose transporter XylE; Provisional
154-306 5.95e-06

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 48.92  E-value: 5.95e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  154 GVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASA-----------ASVSYV-MFAITRTLTGSALaGFTIIVMPL-- 219
Cdd:PRK10077  67 GCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAwpefgftsigpDNTGYVpEFVIYRIIGGIGV-GLASMLSPMyi 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  220 -ELEWLDVEHRTVA-GVLSSTFwtgGVMLLALVGYLIRD-----------WRWLLLAVTLPCAPGILSLWWVPESARWLL 286
Cdd:PRK10077 146 aEIAPAHIRGKLVSfNQFAIIF---GQLVVYFVNYFIARsgdaswlntdgWRYMFASEAIPALLFLMLLYFVPETPRYLM 222
                        170       180
                 ....*....|....*....|
gi 90669191  287 TQGHVKEAHRYLLHcarLNG 306
Cdd:PRK10077 223 SRGKQEQAEGILRK---IMG 239
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
156-273 1.16e-05

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 47.57  E-value: 1.16e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 156 LVGAVA---FGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVA 232
Cdd:cd17504  42 LVGAVStpiLGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLIAGRALQGIGGAVFPLAFALVREEFPPERVPVAQ 121
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 90669191 233 GVLSSTFwtGGVMLLALV--GYLIR--DWRWLLLAVTLPCAPGIL 273
Cdd:cd17504 122 GILSATF--GIGAGIGLPlgGWIVQhlGWRWIFWTAAPVAVLLAA 164
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
139-243 1.84e-05

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 46.89  E-value: 1.84e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 139 EQKGLNRAASTFFFA----GVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTI 214
Cdd:COG2814 236 EVLGLSASAAGLLLAlfglGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLFP 315
                        90       100       110
                ....*....|....*....|....*....|
gi 90669191 215 IVMPLELEWLDVEHR-TVAGVLSSTFWTGG 243
Cdd:COG2814 316 LLQALVAELAPPEARgRASGLYNSAFFLGG 345
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
149-287 1.93e-05

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 46.80  E-value: 1.93e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 149 TFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGsALAGFTIIVMPLELEWLDVEH 228
Cdd:cd17330  41 SSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWLLFLARFLDG-LTGGNVSVAQAYIADITDEEE 119
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 90669191 229 RTVA-GVLSSTFWTGGVMLLALVGYLIRDWRW---LLLAVTLPCAPGILSLWWVPESARWLLT 287
Cdd:cd17330 120 RAKAfGIISAAFGLGFILGPALGGFLSTPYGYalpFLVAAALALLNLVLVLFFLPPLRRLLLV 182
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
149-300 2.01e-05

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 46.85  E-value: 2.01e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 149 TFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEH 228
Cdd:cd17328  41 TVFIISYMVLSPIFGYLGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLFRALVGIGEASYSPIAPTIIADLFPKEK 120
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 90669191 229 RTVA-GVLSSTFWTG---GVMLLALVGYLIRDWRWLLLAVTLPCA-PGILSLWWVPESARwlltqGHVKEAHRYLLH 300
Cdd:cd17328 121 RTRAlGVFYFAIPLGsglGYVVGGLVAQATGGWRWAFRVTGVLGVlLAILLLLFVREPPR-----GAAEGGVMAKST 192
MFS_FEN2_like cd17327
Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; ...
147-446 5.03e-05

Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; This family is composed of Saccharomyces cerevisiae pantothenate transporter FEN2 (or fenpropimorph resistance protein 2) and similar proteins from fungi and bacteria including fungal vitamin H transporter, allantoate permease, and high-affinity nicotinic acid transporter, as well as Pseudomonas putida phthalate transporter and nicotinate degradation protein T (nicT). These proteins are involved in the uptake into the cell of specific substrates such as pathothenate, biotin, allantoate, and nicotinic acid, among others. The FEN2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340885 [Multi-domain]  Cd Length: 406  Bit Score: 45.70  E-value: 5.03e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 147 ASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDV 226
Cdd:cd17327  46 GNTVFYVGYIIFELPGNLLLQRFPPSKWLSVFIVLWGLLTLLTAAVKNFGGLIALRFFLGLFESGVFPGFILYLGMWYKR 125
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 227 EHRTVAgvlsSTFWTGGVMLLALVGYLI-------------RDWRWLLL---AVTLPCapGILSLWWVPE--SARWLLTQ 288
Cdd:cd17327 126 EEQAKR----IAFFYAAAGLGSIFGGLLaygvfkilgvgglAGWRWLFIiegLITIII--GLVIFFWLPDnpSKAWFLTE 199
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 289 GHVKEAHRYLLhcARLNGRPVCEDSFSQeavskvaagervvrrpsYLDLFRTPRLrhisLCCVVVWFGVNFSYYGLS--- 365
Cdd:cd17327 200 EEKELAVERLR--ANQTGKGDQKFKWKQ-----------------IKEAFKDPRT----WLLFLFFFCSQITNNGISnfl 256
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 366 -LDVSGLGLNVYQTQLL---FGAVELPSKLLV-YLSVRYAGRRLTQAGTLLgTALAFGTrLLVSSDMKSWSTVLAVMGKA 440
Cdd:cd17327 257 pLILKSLGFYSLQTNLLsvpIGALGAVSLLIAaLLSDRFKKRGLFAIFACV-LALVGSI-ILLAAPNPPGAYFAAYILGG 334

                ....*.
gi 90669191 441 FSEAAF 446
Cdd:cd17327 335 GSYAGF 340
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
124-280 9.62e-05

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 44.87  E-value: 9.62e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 124 FSSTIATESQwDLVCEQKGLNRAAS----TFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFA 199
Cdd:cd17323  13 FGSSIYSPAL-PQIAEDFHVSEEVAnlgvSLFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGCALAPNIAMLI 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 200 ITRTLTGS------ALAGFTIIVMplelewLDVEHRTVAgvlsSTFWTGGVMLLALVGYLI-------RDWRW---LLLA 263
Cdd:cd17323  92 ILRFLQGFfgssplAIGAGTIADL------FTPEERGKA----MGVYSLGPLLGPALGPIIggfitqsLGWRWifwFLAI 161
                       170
                ....*....|....*..
gi 90669191 264 VTLPCApgILSLWWVPE 280
Cdd:cd17323 162 ISGFCL--ILIFLFLPI 176
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
149-491 1.43e-04

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 44.10  E-value: 1.43e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 149 TFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIV--MPLELewldV 226
Cdd:cd17320  41 SAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLIARFLQGLGAAAGSVVAraIVRDL----Y 116
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 227 EHRTVAGVLSstfWTGGVMLLALV------GYLIR--DWR---WLLLAVTLPCApgILSLWWVPESarwlLTQGHVKEAH 295
Cdd:cd17320 117 SGAELAKIFS---LLMMILAIAPAlapllgGLLLLffGWRaifVFLALLGLLLL--LLVLLFLPET----LPEEKRKPLL 187
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 296 RYLLHcarlngrpvcedsfsqeavskvaagervvrrpSYLDLFRTPRLRHISLCCVVVwFGVNFSYYGLS--LDVSGLGL 373
Cdd:cd17320 188 SSLLR--------------------------------AYKRVLKNRRFLGYALALGLS-FAGLFAYLAAApfIYIEQLGL 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 374 NVYQTQLLFG----AVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVS-SDMKSWSTVLAVMGKAFSEA-AFT 447
Cdd:cd17320 235 SPAQFGLLFAlnaiALILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAALlGGLSLWPLVAPLFLIFFGFGlIFP 314
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*
gi 90669191 448 TAYLFTSELYPTVlRQTGMGLTALVGRLGGSLA-PLAALLDGVWL 491
Cdd:cd17320 315 NATSLALEPFPHV-AGTASALLGFLQFLIGALAgALVGLLPNGTA 358
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
157-486 1.51e-04

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 44.44  E-value: 1.51e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 157 VGAVAFGYLSDRFGRRRLLLVAY----VSTLVLG-LASAASVSY---VMFAITRTLTGSALAGftiivmplelEW----- 223
Cdd:cd17369  59 LGGVVFGHFGDRIGRKKTLVLTLllmgIATFLIGlLPTYAQIGIlapILLVLLRLLQGLALGG----------EWggavl 128
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 224 LDVEHrtvAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCA---------PGILSLWWVpesARWLLTQGHVKEA 294
Cdd:cd17369 129 MAVEH---APPKRRGFYGSFPQLGAPVGLLLATGVFLLLSALLSDEaflswgwriPFLLSAVLV---AVGLYIRLRLEET 202
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 295 hryllhcarlngrPVCEDSfsQEAVSKVAAGERVVRRPSYLDLFRTPRLRhisLCCVVVWFGVNFsyYGLSLDVSGLGLN 374
Cdd:cd17369 203 -------------PVFRRA--KEAGQVVRAPLVEVLRRHWRALLLAIGLR---LAENVLFYLFTT--FALSYATQTLGVD 262
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 375 ---VYQTQLLFGAVELPSKLLV-YLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMKSWSTVLAVMGKAFSEAAF---T 447
Cdd:cd17369 263 rstVLLAVLIASVVAAITIPLFgWLSDRVGRRPVYLAGALLAALFAFPFFWLLDTGSTWLIVLAAVVVLGVLHGMMygpQ 342
                       330       340       350       360
                ....*....|....*....|....*....|....*....|
gi 90669191 448 TAYLftSELYPTVLRQTGMGLTALVGR-LGGSLAPLAALL 486
Cdd:cd17369 343 AAFL--AELFPTRVRYTGASLGYQLGAiLGGGFAPLIATA 380
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
152-483 1.56e-04

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 44.33  E-value: 1.56e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   152 FAGVLVGAVAFGYLSDRFGRRRL----LLVAYVSTLVLGLASAASVSYVMFAIT--RTLTGSALAG---FTIIVMPlelE 222
Cdd:TIGR00887  66 SIGTLAGQLFFGWLADKLGRKRVygmeLIIMIIATVASGLSPGSSPKSVMATLCfwRFWLGVGIGGdypLSAIITS---E 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   223 WLDVEHR--TVAGVLSSTFW---TGGVMLLAL------------------------VGYLirdWRWLLLAVTLPcapGIL 273
Cdd:TIGR00887 143 FATKKWRgaMMAAVFAMQGFgilAGAIVALIVlagfkhsleaaadeasctgscvpaVDYM---WRILIGFGAVP---ALL 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   274 SLWW---VPESARWLLTQGH-VKEA--HRYllhcARLNGRPVCEDSFSQEAVSKVAagervVRRPSYLDLFRTPRL-RH- 345
Cdd:TIGR00887 217 ALYFrltIPETPRYTADVAKdVEQAasDMS----AVLQVKIEAEPDEVEKASTAVE-----VPKASWSDFFTHFFKwRHg 287
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   346 -ISLCCVVVWFGVNFSYYGLSLDVS-----------GLGLNVYQT-------QLLF---GAVelPSKLLVYLSVRYAGRR 403
Cdd:TIGR00887 288 kHLLGTAGSWFLLDIAFYGVNLNQKvilsaigysppAATNNAYEElyktavgNLIIalaGTV--PGYWVTVFLVDIIGRK 365
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191   404 LTQAG-----TLLGTALAFGtrllvssdMKSWST--VLAVMGKAFSEAAF---TTAYLFTSELYPTVLRQTGMGLTALVG 473
Cdd:TIGR00887 366 PIQLMgffilTVLFFVLGFA--------YNHLSThgFLAIYVLAQFFANFgpnATTFIVPGEVFPTRYRSTAHGISAASG 437
                         410
                  ....*....|
gi 90669191   474 RLGGSLAPLA 483
Cdd:TIGR00887 438 KAGAIIGQFG 447
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
148-276 6.25e-04

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 42.16  E-value: 6.25e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 148 STFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVE 227
Cdd:cd17477  37 ASAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWFLLRFVMGIGLAGLFVVSESWLNALATNE 116
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 90669191 228 HRTVAGVLSSTFWTGGV----MLLALVGylIRDWRWLLLAVTLPCAPGILSLW 276
Cdd:cd17477 117 NRGRVLGLYSTVLGLGFalgpLLLALVG--TAGALPFLIAAVLLLLALVPLLL 167
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
149-284 6.39e-04

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 42.15  E-value: 6.39e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 149 TFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEH 228
Cdd:COG0738 253 SLFWGGMTIGRFLGGFLLKRFGPVRLLRLSALLAAVGLLLALLAPGPWLALIGLALVGLGLSLMFPTIFSLALDGLGKRT 332
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 90669191 229 RTVAGVLSSTFWTGGVMLLALVGYLIR--DWRWLLLAVTLPCAPGILSLWWVPESARW 284
Cdd:COG0738 333 AAAVSAVLIMGIVGGAIGPPLIGFLADafGLRAAFLVPLVCYLLILLLALALKRKRRK 390
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
150-419 8.36e-04

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 41.76  E-value: 8.36e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 150 FFFAGVLVGAVA----FGYLSDR-FGRRRLLLVAyvstlvlglASAASVSYVMFAITRT-----LTGSALAGFTIIVMPL 219
Cdd:cd17471  36 IFMTLSALSGIVvsqwLGRLSDRgGDRKPLILLA---------LLAGALGYLLFAFLRNywvllLVGVVLLSLGAAAFPQ 106
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 220 EL----EWLDVEHRTVAGVLSSTF-------WTGG----VMLLALVGYlirdwRWL-LLAVTLPCAPGILSLWWVPESAR 283
Cdd:cd17471 107 LFalarEYADRSSGRDATLFNSVLraafslaWVIGpplaFLLLDVLGF-----TGLfLLAALLYLVVALLVLFLLPSVKP 181
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 284 wlltqghvkeahryllhcarlngrpvcedsfsQEAVSKVAAGERVVRRPSYLDLFrtprlrhisLCCVVVWFGVNFSY-Y 362
Cdd:cd17471 182 --------------------------------PAQKATPASSLVKAPVNRRLLLL---------FAAFTLLFAANSMYiI 220
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 90669191 363 GLSLDVS-GLGLNVYQTQLLFG---AVELPSKLLV-YLSVRYAGRRLTQAGTLLGTALAFGT 419
Cdd:cd17471 221 AMPLYVTnELGGSESWVGLLFGlaaALEIPIMLLAgLLAKRFGKRRLLLAGFLAGVLFYLGL 282
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
149-277 8.59e-04

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 41.83  E-value: 8.59e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 149 TFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEH 228
Cdd:cd06173 251 AAFGVGALLGALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTLLQLRVPDEL 330
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 90669191 229 RT-VAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCAPGILSLWW 277
Cdd:cd06173 331 RGrVFSVYNALNSGAMPLGALLAGLLADALGLSAVFLLAGALLLLAALLL 380
PRK12307 PRK12307
MFS transporter;
148-493 9.08e-04

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 41.84  E-value: 9.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  148 STFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLV-LGLASAASVSYvMFAITRTLTGSALAGFTIIVMPLELE-WLD 225
Cdd:PRK12307  59 ATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVgTGLSGLASGVI-MLTLSRFIVGMGMAGEYACASTYAVEsWPK 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  226 VEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWlLLAVTLPCAPGILSLWW---VPESARWLltqghvkeahryllhca 302
Cdd:PRK12307 138 HLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW-RAAFFVGLLPVLLVIYIrarAPESKEWE----------------- 199
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  303 rlngrpvcEDSFSqeAVSKVAAGERVVRRPSYLDLFRTPRLRhISLCCVVVW---FGVNFSYYG-LSLDVSGLGLNVYQT 378
Cdd:PRK12307 200 --------EAKLS--GKGKHSQSAWSVFSLSMKGLFNRAQFP-LTLCVFIVLfsiFGANWPIFGlLPTYLAGEGFDTGVV 268
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191  379 QLLFGAVELPSkLLVYLSVRYAGRRLTQAGTL---LGTALAFGTRLLVSSDMKSWSTVLAVMGKAFSE---AAFTTAYLF 452
Cdd:PRK12307 269 SNLMTAAAFGT-VLGNIVWGLCADRIGLKKTFsigLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNvgvGGLVPKFLY 347
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 90669191  453 tsELYPTVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSL 493
Cdd:PRK12307 348 --DYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGL 386
MFS_YjiJ cd06180
Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of ...
152-283 1.25e-03

Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340869 [Multi-domain]  Cd Length: 371  Bit Score: 41.14  E-value: 1.25e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 152 FAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRT- 230
Cdd:cd06180  44 YAGYLVGALLASFLRRRGRARRLIRGGLLLTVLLLAAMALTSGFAALLALRFLAGAASAFVFVFGSNLVLHHATAAGRGh 123
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 90669191 231 -----VAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVtLPCAPGILSLWWVPESAR 283
Cdd:cd06180 124 ligllFAGVGLGIALSGLLVPAGLGGGLSWRAGWLALAL-LSAVLLLLSFLLLRRGPS 180
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
140-275 1.58e-03

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 41.00  E-value: 1.58e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 140 QKGLNRAASTFFFAGVLVGAVAF----GYLSDRFGRRRLLLVAYVSTLV--LGLASAASVSYVMFAITrTLTGSALAGFT 213
Cdd:cd17477 217 RLGLSVAQAALLLAAFVLGGLLLqwplGWLADRFDRRRVLLGCALLGALaaLLLPLVPGLPLALLVLL-FLWGGAAGPLY 295
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 90669191 214 IIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDW---RWLLLAVTLPCAPGILSL 275
Cdd:cd17477 296 TLALALAGDRLPGDELVAANAALLLLYGLGSVIGPLLAGALMDAfgpHGLFLFLAAVALLFLLFL 360
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
149-276 1.69e-03

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 40.87  E-value: 1.69e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 149 TFFFAGVLVGAVAFGYLSDR-FGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVE 227
Cdd:cd06174 246 SLFGLAGALGSLLLGLLSDRlIGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFALIAELFPPE 325
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 90669191 228 HR-TVAGVLSSTFWTGGVMLLALVGYLIR---DWRWLLLAVTLPCAPGILSLW 276
Cdd:cd06174 326 IRgTAFGLLNTFGFLGGAIGPLLAGFLLAatfGLTGAFLVLAVLLLLAAILLL 378
MFS_PLT cd17437
Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The ...
156-475 1.94e-03

Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The plant Polyol transporter (PLT) subfamily includes PLT1-6 from Arabidopsis thaliana and similar transporters. The best characterized member of the group is Polyol transporter 5, also called Sugar-proton symporter PLT5, which mediates the H+-symport of numerous substrates including linear polyols (such as sorbitol, xylitol, erythritol or glycerol), cyclic polyol myo-inositol, and different hexoses, pentoses (including ribose), tetroses, and sugar alcohols. It functions to transport a wide range of substrates into specific sink tissues in the plant. The PLT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340995 [Multi-domain]  Cd Length: 387  Bit Score: 40.85  E-value: 1.94e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 156 LVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALaGFTIIVMPL-ELEWLDVEHRTVAGV 234
Cdd:cd17437  46 LVGSLAAGRTSDWIGRRYTIALAALIFFVGALLMGVAPNYPVLMVGRFVAGIGV-GFALMIAPVyTAEVAPASSRGFLTS 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 235 LSSTFWTGGVMLLALVGYLIR------DWRWLLLAVTLPC---APGILSLwwvPESARWlltqghvkeahryllhcarln 305
Cdd:cd17437 125 FPEIFINIGILLGYVSNYAFSglplhvGWRLMLGVGAVPSlflAIGVLAM---PESPRW--------------------- 180
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 306 grpvcedsfsqeavskvaagervvrrpsyldlfrTPRLRHIslccVVVWFGVNFSYYglsldVSGLGLNVYQTQLLFGAV 385
Cdd:cd17437 181 ----------------------------------TPAVRRM----LIAALGIHFFQQ-----ASGIDAVVLYSPRIFKKA 217
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 386 ELPSK---LLVYLSVRYA---------------GRR---LTQAG--TLLGTALAFGTRLLVSSDMKS-WSTVLAVMG--- 438
Cdd:cd17437 218 GIKSKdklLLATVAVGVTktlfilvatflldkvGRRpllLTSTGgmTLSLTALATSLTFIDRNGGGLtWALVLAITAvcs 297
                       330       340       350
                ....*....|....*....|....*....|....*....
gi 90669191 439 --KAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRL 475
Cdd:cd17437 298 fvAFFSIGAGPITWVYSSEIFPLRLRAQGASLGVVVNRL 336
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
152-278 2.29e-03

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 40.25  E-value: 2.29e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 152 FAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTI-----IVMPLELEWLDV 226
Cdd:cd17320 247 AIALILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAALLGGLSLWPLVAPLFLIFFGFglifpNATSLALEPFPH 326
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 90669191 227 EHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCAPGILSLWWV 278
Cdd:cd17320 327 VAGTASALLGFLQFLIGALAGALVGLLPNGTALPMGLLILVLGLLALLLLIL 378
MFS_SLC17 cd17318
Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The ...
151-259 2.36e-03

Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The Solute carrier 17 (SLC17) family is primarily involved in the transport of organic anions. There are nime human proteins belonging to this family including: the type I phosphate transporters (SLC17A1-4) that were initially identified as sodium-dependent inorganic phosphate (Pi) transporters but are now known to be involved in tha transport of organic anions; lysosomal acidic sugar transporter (SLC17A5 or sialin), vesicular glutamate transporters (VGluT1#3 or SLC17A7, SLC17A6, and SLC17A8, respectively), and a vesicular nucleotide transporter (VNUT or SLC17A9). SLC17A1 and SLC17A3 have roles in the transport of urate and para-aminohippurate, respectively. The SLC17 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340876 [Multi-domain]  Cd Length: 389  Bit Score: 40.29  E-value: 2.36e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 151 FFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGL--ASAASVSYVMFAITRTLTGSAL-----AGFTIIVmplelEW 223
Cdd:cd17318  65 FFYGYILTQIPGGYLAEKYGAKRVLGYSILITALLTLltPLAARGGYGALIVLRILQGLAQgvtfpAMHALWA-----KW 139
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 90669191 224 LDVEHRTVAGVLS-STFWTGGVMLLALVGYLIRDWRW 259
Cdd:cd17318 140 APPLERSRLTSIAySGSQFGTVIAMPLSGFLCESLGW 176
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
162-278 2.52e-03

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 40.24  E-value: 2.52e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 162 FGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAG-----FTIIVMPLELEwldvEHRTVAGVLS 236
Cdd:cd17502  50 YGKLSDLFGRKWVLLIAIVIFELGSLLCGLAPNMTMLIVGRAIQGIGGGGlmslaFIIIADLVPPR----ERGKYQGYIG 125
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 90669191 237 STFWTGGVMlLALVGYLIRD---WRWLLL------AVTLPCAPGILSLWWV 278
Cdd:cd17502 126 AVFGIASVA-GPLIGGAFTDhlsWRWCFYinlpigGLALALLRTILLSSIF 175
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
146-269 3.90e-03

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 39.56  E-value: 3.90e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 146 AASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAyVSTLVLGLA-SAASVSYVMFAITRTLTGSALAGFTIIVMPLEL--E 222
Cdd:cd17355  42 LAFTVGLLAFGLAQPFVGRLLDRFGPRRVMLLG-LLLLAAGLVlLALATSLWQLYLLWGLLGGGGAGTLAAVAFATVaaW 120
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 90669191 223 WLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIR--DWRWLLLAVTLPCA 269
Cdd:cd17355 121 WFERRRGLALGILTAGGGLGSLVFLPLGAALIEafGWRTALLVLALLAL 169
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
113-278 5.22e-03

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 39.23  E-value: 5.22e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 113 CSQGWEYDHSEFSSTIATESQwdLVCEQKGLNRAasTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAAS 192
Cdd:cd17333 210 LYVGAETAFSSWVPSYLVEKK--HVSDGLAGYLL--SGFWVGITIGRLLGGPISRRIKPHTLLVLSGSGALLGLLILLLA 285
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 193 VSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGylirdwrWLLLAVTLPCAPGI 272
Cdd:cd17333 286 PTLVVGLVATALLGLFMAALFPTILSLGISNLPYAKGKGTSVLLAAGSIGGAIIPFIMG-------FIAEAVGIQTAMLL 358

                ....*.
gi 90669191 273 LSLWWV 278
Cdd:cd17333 359 ITILYA 364
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
143-281 5.37e-03

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 39.18  E-value: 5.37e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90669191 143 LNRAASTFFFAgVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSAL-AGFTIIVMPLEl 221
Cdd:cd17312  40 LGIIGSAFLIA-YAVGKFISGFLSDRSNIRRFMSAGLLLSALANIFMGFSTSLWFFAVLWGLNGLFQsMGWPPCVKLLG- 117
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 90669191 222 EWLDVEHR-TVAGVLS--STFWTGGVMLLALVGYLIRDWRW-LLLAVTLPCAPGILSLWWVPES 281
Cdd:cd17312 118 NWFSKKERgTVYGIWStsHNFGGILAPILAASLASYYGWRAaFLVPGIVGLVVAIILFFFLRDS 181
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
146-213 8.21e-03

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 38.77  E-value: 8.21e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 90669191 146 AASTFFFAGVLvgavafGYLSDRFGRRRLLLVAyvstlvlgLASAAsVSYVMFAITRTL----TGSALAGFT 213
Cdd:cd17388  48 ALMQFIFAPIL------GALSDRFGRRPVLLLS--------LAGAA-LDYLLMAFAPTLwwlyLGRIIAGIT 104
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
152-205 9.48e-03

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 38.41  E-value: 9.48e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 90669191 152 FAGVLVGAVAFGYLSDRFGRRRLLLVAyVSTLVLG-LASAASVSYVMFAITRTLT 205
Cdd:cd17364  49 LVGTIIGQLFFGFLGDRFGRKRVYGVE-LIIMIIGtILSALSPGSTPLGVMGWLI 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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