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Conserved domains on  [gi|28416911|ref|NP_775088|]
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interferon lambda receptor 1 isoform 3 precursor [Homo sapiens]

Protein Classification

Tissue_fac domain-containing protein( domain architecture ID 10471408)

Tissue_fac domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Tissue_fac pfam01108
Tissue factor; This family is found in metazoa, and is very similar to the fibronectin type ...
 10-111 7.16e-32

Tissue factor; This family is found in metazoa, and is very similar to the fibronectin type III domain. The family is found in cytokine receptors, interleukin and interferon receptors and coagulation factor III proteins. It occurs multiple times, as does fn3, family pfam00041.


:

Pssm-ID: 460067  Cd Length: 107  Bit Score: 112.86  E-value: 7.16e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28416911    10 LLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSpTRRRWREVEECAGTKELLCSMMCLKK 89
Cdd:pfam01108   8 LLLLALASAAGGPSLPAPQNVTFQSTNFKNILTWEPGPNSPPDVVYTVQYKIY-GSGDWKNVPNCTNITRTECDLTDETS 86

                          90       100
                  ....*....|....*....|..
gi 28416911    90 qDLYNKFKGRVRTVSPSSKSPW 111
Cdd:pfam01108  87 -DLTETYYARVRAVSGGGTSSW 107
 
Name Accession Description Interval E-value
Tissue_fac pfam01108
Tissue factor; This family is found in metazoa, and is very similar to the fibronectin type ...
 10-111 7.16e-32

Tissue factor; This family is found in metazoa, and is very similar to the fibronectin type III domain. The family is found in cytokine receptors, interleukin and interferon receptors and coagulation factor III proteins. It occurs multiple times, as does fn3, family pfam00041.


Pssm-ID: 460067  Cd Length: 107  Bit Score: 112.86  E-value: 7.16e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28416911    10 LLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSpTRRRWREVEECAGTKELLCSMMCLKK 89
Cdd:pfam01108   8 LLLLALASAAGGPSLPAPQNVTFQSTNFKNILTWEPGPNSPPDVVYTVQYKIY-GSGDWKNVPNCTNITRTECDLTDETS 86

                          90       100
                  ....*....|....*....|..
gi 28416911    90 qDLYNKFKGRVRTVSPSSKSPW 111
Cdd:pfam01108  87 -DLTETYYARVRAVSGGGTSSW 107
 
Name Accession Description Interval E-value
Tissue_fac pfam01108
Tissue factor; This family is found in metazoa, and is very similar to the fibronectin type ...
 10-111 7.16e-32

Tissue factor; This family is found in metazoa, and is very similar to the fibronectin type III domain. The family is found in cytokine receptors, interleukin and interferon receptors and coagulation factor III proteins. It occurs multiple times, as does fn3, family pfam00041.


Pssm-ID: 460067  Cd Length: 107  Bit Score: 112.86  E-value: 7.16e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28416911    10 LLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSpTRRRWREVEECAGTKELLCSMMCLKK 89
Cdd:pfam01108   8 LLLLALASAAGGPSLPAPQNVTFQSTNFKNILTWEPGPNSPPDVVYTVQYKIY-GSGDWKNVPNCTNITRTECDLTDETS 86

                          90       100
                  ....*....|....*....|..
gi 28416911    90 qDLYNKFKGRVRTVSPSSKSPW 111
Cdd:pfam01108  87 -DLTETYYARVRAVSGGGTSSW 107
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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