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Conserved domains on  [gi|54873602|ref|NP_787081|]
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protein FAM181B [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FAM181 super family cl24280
FAM181; This family of proteins is found in eukaryotes. Proteins in this family are typically ...
63-235 8.14e-17

FAM181; This family of proteins is found in eukaryotes. Proteins in this family are typically between 256 and 426 amino acids in length.


The actual alignment was detected with superfamily member pfam15238:

Pssm-ID: 434560  Cd Length: 285  Bit Score: 80.41  E-value: 8.14e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54873602    63 TRDLLSFIDSASSNIKLALDKPGKSKRKVNHRKYLQKQIKRCSGLMGAAPPGPPSPSAADTPAKRPLAAPSAPTVAAPAH 142
Cdd:pfam15238   7 VKTLLNFVNLASSDIKAALDKSAPCRRSVDHRKYLQKQLKRFSQKYSRLPRGLPGRGAEPSLKRRPEDKPGNSGGCKSEK 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54873602   143 GKAAPRREASQAAAAASLQSRSLAALFDSLRHVPGGAEPAggevaapaaglggagtggaggdvagpagataipGARKVPL 222
Cdd:pfam15238  87 SLGTEFRPTSRRDSHIGALSKSEEALKKEQTLQRQAPEAA---------------------------------RPDQVPM 133
                         170
                  ....*....|...
gi 54873602   223 RARNLPPSFFTEP 235
Cdd:pfam15238 134 RKRQLPASFWEEP 146
 
Name Accession Description Interval E-value
FAM181 pfam15238
FAM181; This family of proteins is found in eukaryotes. Proteins in this family are typically ...
63-235 8.14e-17

FAM181; This family of proteins is found in eukaryotes. Proteins in this family are typically between 256 and 426 amino acids in length.


Pssm-ID: 434560  Cd Length: 285  Bit Score: 80.41  E-value: 8.14e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54873602    63 TRDLLSFIDSASSNIKLALDKPGKSKRKVNHRKYLQKQIKRCSGLMGAAPPGPPSPSAADTPAKRPLAAPSAPTVAAPAH 142
Cdd:pfam15238   7 VKTLLNFVNLASSDIKAALDKSAPCRRSVDHRKYLQKQLKRFSQKYSRLPRGLPGRGAEPSLKRRPEDKPGNSGGCKSEK 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54873602   143 GKAAPRREASQAAAAASLQSRSLAALFDSLRHVPGGAEPAggevaapaaglggagtggaggdvagpagataipGARKVPL 222
Cdd:pfam15238  87 SLGTEFRPTSRRDSHIGALSKSEEALKKEQTLQRQAPEAA---------------------------------RPDQVPM 133
                         170
                  ....*....|...
gi 54873602   223 RARNLPPSFFTEP 235
Cdd:pfam15238 134 RKRQLPASFWEEP 146
 
Name Accession Description Interval E-value
FAM181 pfam15238
FAM181; This family of proteins is found in eukaryotes. Proteins in this family are typically ...
63-235 8.14e-17

FAM181; This family of proteins is found in eukaryotes. Proteins in this family are typically between 256 and 426 amino acids in length.


Pssm-ID: 434560  Cd Length: 285  Bit Score: 80.41  E-value: 8.14e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54873602    63 TRDLLSFIDSASSNIKLALDKPGKSKRKVNHRKYLQKQIKRCSGLMGAAPPGPPSPSAADTPAKRPLAAPSAPTVAAPAH 142
Cdd:pfam15238   7 VKTLLNFVNLASSDIKAALDKSAPCRRSVDHRKYLQKQLKRFSQKYSRLPRGLPGRGAEPSLKRRPEDKPGNSGGCKSEK 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54873602   143 GKAAPRREASQAAAAASLQSRSLAALFDSLRHVPGGAEPAggevaapaaglggagtggaggdvagpagataipGARKVPL 222
Cdd:pfam15238  87 SLGTEFRPTSRRDSHIGALSKSEEALKKEQTLQRQAPEAA---------------------------------RPDQVPM 133
                         170
                  ....*....|...
gi 54873602   223 RARNLPPSFFTEP 235
Cdd:pfam15238 134 RKRQLPASFWEEP 146
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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