coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Danio rerio]
Protein Classification
coiled-coil-helix-coiled-coil-helix domain-containing protein( domain architecture ID 10535875)
coiled-coil-helix-coiled-coil-helix (CHCH) domain-containing protein carries (CX9C) type motifs and is imported into the mitochondrion with the help of the disulfide relay-dependent MIA import pathway
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| CHCH | pfam06747 | CHCH domain; we have identified a conserved motif in the LOC118487 protein that we have called ... |
103-134 | 1.32e-04 | ||
CHCH domain; we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterized proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesize the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit. The CHCH domain was previously called DUF657. : Pssm-ID: 429096 Cd Length: 35 Bit Score: 37.22 E-value: 1.32e-04
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| COG3416 super family | cl47320 | Uncharacterized conserved protein, DUF2076 domain [Function unknown]; |
44-87 | 2.56e-04 | ||
Uncharacterized conserved protein, DUF2076 domain [Function unknown]; The actual alignment was detected with superfamily member COG3416: Pssm-ID: 442642 [Multi-domain] Cd Length: 237 Bit Score: 39.24 E-value: 2.56e-04
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| Name | Accession | Description | Interval | E-value | ||
| CHCH | pfam06747 | CHCH domain; we have identified a conserved motif in the LOC118487 protein that we have called ... |
103-134 | 1.32e-04 | ||
CHCH domain; we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterized proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesize the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit. The CHCH domain was previously called DUF657. Pssm-ID: 429096 Cd Length: 35 Bit Score: 37.22 E-value: 1.32e-04
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| COG3416 | COG3416 | Uncharacterized conserved protein, DUF2076 domain [Function unknown]; |
44-87 | 2.56e-04 | ||
Uncharacterized conserved protein, DUF2076 domain [Function unknown]; Pssm-ID: 442642 [Multi-domain] Cd Length: 237 Bit Score: 39.24 E-value: 2.56e-04
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| DUF2076 | pfam09849 | Uncharacterized protein conserved in bacteria (DUF2076); This domain, found in various ... |
44-92 | 3.14e-03 | ||
Uncharacterized protein conserved in bacteria (DUF2076); This domain, found in various hypothetical prokaryotic proteins, has no known function. The domain, however, is found in various periplasmic ligand-binding sensor proteins. Pssm-ID: 430876 Cd Length: 263 Bit Score: 36.26 E-value: 3.14e-03
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| Name | Accession | Description | Interval | E-value | ||
| CHCH | pfam06747 | CHCH domain; we have identified a conserved motif in the LOC118487 protein that we have called ... |
103-134 | 1.32e-04 | ||
CHCH domain; we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterized proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesize the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit. The CHCH domain was previously called DUF657. Pssm-ID: 429096 Cd Length: 35 Bit Score: 37.22 E-value: 1.32e-04
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| COG3416 | COG3416 | Uncharacterized conserved protein, DUF2076 domain [Function unknown]; |
44-87 | 2.56e-04 | ||
Uncharacterized conserved protein, DUF2076 domain [Function unknown]; Pssm-ID: 442642 [Multi-domain] Cd Length: 237 Bit Score: 39.24 E-value: 2.56e-04
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| DUF2076 | pfam09849 | Uncharacterized protein conserved in bacteria (DUF2076); This domain, found in various ... |
44-92 | 3.14e-03 | ||
Uncharacterized protein conserved in bacteria (DUF2076); This domain, found in various hypothetical prokaryotic proteins, has no known function. The domain, however, is found in various periplasmic ligand-binding sensor proteins. Pssm-ID: 430876 Cd Length: 263 Bit Score: 36.26 E-value: 3.14e-03
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| Blast search parameters | ||||
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