|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
106-305 |
2.94e-22 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 97.31 E-value: 2.94e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 106 YLYLQNNFITELPvESFQNATGLRWINLDNNRIRKIDqRVLEKLPGLVFLYMEKNQLEEVPSALPR--NLEQLRLSQNHI 183
Cdd:COG4886 117 SLDLSGNQLTDLP-EELANLTNLKELDLSNNQLTDLP-EPLGNLTNLKSLDLSNNQLTDLPEELGNltNLKELDLSNNQI 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 184 SRIppgvfsklenlllldlqhnrlsdgvfkPDTFHGLKNLMQLNLAHNILRKMPPRVP--TAIHQLYLDSNKIETIPNgy 261
Cdd:COG4886 195 TDL---------------------------PEPLGNLTNLEELDLSGNQLTDLPEPLAnlTNLETLDLSNNQLTDLPE-- 245
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 41349454 262 FKSFPNLAFIRLNYNKLTDrgLPKnSFNISNLLVLHLSHNRISS 305
Cdd:COG4886 246 LGNLTNLEELDLSNNQLTD--LPP-LANLTNLKTLDLSNNQLTD 286
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
133-353 |
2.84e-12 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 68.18 E-value: 2.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 133 LDNNRIRKIDqrvlEKLPG-LVFLYMEKNQLEEVPSALPRNLEQLRLSQNHISRIPPGVFSKLENLLLLdlqHNRLSdgv 211
Cdd:PRK15370 206 LDNNELKSLP----ENLQGnIKTLYANSNQLTSIPATLPDTIQEMELSINRITELPERLPSALQSLDLF---HNKIS--- 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 212 FKPDTFHglKNLMQLNLAHNILRKMPPRVPTAIHQLYLDSNKI----ETIPngyfksfPNLAFIRLNYNKLTD--RGLPk 285
Cdd:PRK15370 276 CLPENLP--EELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLtalpETLP-------PGLKTLEAGENALTSlpASLP- 345
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 41349454 286 nsfniSNLLVLHLSHNRISSVP-AINNRLEHLYLNNNSIekINGTQICPNDLVAFHDFSSDL----ENVPHLR 353
Cdd:PRK15370 346 -----PELQVLDVSKNQITVLPeTLPPTITTLDVSRNAL--TNLPENLPAALQIMQASRNNLvrlpESLPHFR 411
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
103-360 |
4.03e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 62.11 E-value: 4.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 103 RIHYLYLQNNFITELPV-ESFQNatgLRWINLDNNRIRKIDQrvLEKLPGLVFLYMEKNQLEEVP--SALpRNLEQLRLS 179
Cdd:cd21340 3 RITHLYLNDKNITKIDNlSLCKN---LKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKIEnlENL-VNLKKLYLG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 180 QNHISRIppgvfsklenlllldlqhnrlsDGvfkpdtFHGLKNLMQLNLAHNILrkmPPRvptaiHQLYLDSNKIETIPN 259
Cdd:cd21340 77 GNRISVV----------------------EG------LENLTNLEELHIENQRL---PPG-----EKLTFDPRSLAALSN 120
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 260 gyfksfpnlafirlnynkltdrglpknsfnisNLLVLHLSHNRISSVPAINN--RLEHLYLNNNSIEKingtqicpndlv 337
Cdd:cd21340 121 --------------------------------SLRVLNISGNNIDSLEPLAPlrNLEQLDASNNQISD------------ 156
|
250 260
....*....|....*....|...
gi 41349454 338 aFHDFSSDLENVPHLRYLRLDGN 360
Cdd:cd21340 157 -LEELLDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
102-162 |
4.23e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 55.22 E-value: 4.23e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 41349454 102 PRIHYLYLQNNFITELPVESFQNATGLRWINLDNNRIRKIDQRVLEKLPGLVFLYMEKNQL 162
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
244-374 |
5.85e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 55.95 E-value: 5.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 244 IHQLYLDSNKIETIPNgyFKSFPNLAFIRLNYNKLTdrgLPKNSFNISNLLVLHLSHNRISSVPAINN--RLEHLYLNNN 321
Cdd:cd21340 4 ITHLYLNDKNITKIDN--LSLCKNLKVLYLYDNKIT---KIENLEFLTNLTHLYLQNNQIEKIENLENlvNLKKLYLGGN 78
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 41349454 322 SIEKINGtqicpndlvafhdfssdLENVPHLRYLRLDGNYLkppiPLDLMMCF 374
Cdd:cd21340 79 RISVVEG-----------------LENLTNLEELHIENQRL----PPGEKLTF 110
|
|
| LRRNT |
smart00013 |
Leucine rich repeat N-terminal domain; |
72-107 |
2.38e-06 |
|
Leucine rich repeat N-terminal domain;
Pssm-ID: 214470 [Multi-domain] Cd Length: 33 Bit Score: 43.85 E-value: 2.38e-06
10 20 30
....*....|....*....|....*....|....*.
gi 41349454 72 DCPRECYCPPdfpSALYCDSRNLRKVPVIPPRIHYL 107
Cdd:smart00013 1 ACPAPCNCSG---TAVDCSGRGLTEVPLDLPPDTTL 33
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
291-362 |
3.61e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.97 E-value: 3.61e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 41349454 291 SNLLVLHLSHNRISSVPAI----NNRLEHLYLNNNSIEKINGtqicpndlVAFHDFssdlenvPHLRYLRLDGNYL 362
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGafkgLSNLKVLDLSNNLLTTLSP--------GAFSGL-------PSLRYLDLSGNRL 61
|
|
| LRRNT |
pfam01462 |
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ... |
72-102 |
9.41e-04 |
|
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.
Pssm-ID: 396168 [Multi-domain] Cd Length: 28 Bit Score: 36.45 E-value: 9.41e-04
10 20 30
....*....|....*....|....*....|.
gi 41349454 72 DCPRECYCPPdfpSALYCDSRNLRKVPVIPP 102
Cdd:pfam01462 1 ACPVPCHCSA---TVVNCSDRGLTAVPRDLP 28
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
106-305 |
2.94e-22 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 97.31 E-value: 2.94e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 106 YLYLQNNFITELPvESFQNATGLRWINLDNNRIRKIDqRVLEKLPGLVFLYMEKNQLEEVPSALPR--NLEQLRLSQNHI 183
Cdd:COG4886 117 SLDLSGNQLTDLP-EELANLTNLKELDLSNNQLTDLP-EPLGNLTNLKSLDLSNNQLTDLPEELGNltNLKELDLSNNQI 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 184 SRIppgvfsklenlllldlqhnrlsdgvfkPDTFHGLKNLMQLNLAHNILRKMPPRVP--TAIHQLYLDSNKIETIPNgy 261
Cdd:COG4886 195 TDL---------------------------PEPLGNLTNLEELDLSGNQLTDLPEPLAnlTNLETLDLSNNQLTDLPE-- 245
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 41349454 262 FKSFPNLAFIRLNYNKLTDrgLPKnSFNISNLLVLHLSHNRISS 305
Cdd:COG4886 246 LGNLTNLEELDLSNNQLTD--LPP-LANLTNLKTLDLSNNQLTD 286
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
109-363 |
3.05e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 91.53 E-value: 3.05e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 109 LQNNFITELPVESFQNATGLRWINLDNNRIrkidqrvLEKLPGLVFLYMEKNQLEEVPSALPR--NLEQLRLSQNHISRI 186
Cdd:COG4886 79 LLLLSLLLLGLTDLGDLTNLTELDLSGNEE-------LSNLTNLESLDLSGNQLTDLPEELANltNLKELDLSNNQLTDL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 187 PPGVFSklenlllldlqhnrlsdgvfkpdtfhgLKNLMQLNLAHNILRKMPPRVP--TAIHQLYLDSNKIETIPNGyFKS 264
Cdd:COG4886 152 PEPLGN---------------------------LTNLKSLDLSNNQLTDLPEELGnlTNLKELDLSNNQITDLPEP-LGN 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 265 FPNLAFIRLNYNKLTDrgLPKNSFNISNLLVLHLSHNRISSVPAINN--RLEHLYLNNNSIEKIngtqicpndlvafhdf 342
Cdd:COG4886 204 LTNLEELDLSGNQLTD--LPEPLANLTNLETLDLSNNQLTDLPELGNltNLEELDLSNNQLTDL---------------- 265
|
250 260
....*....|....*....|.
gi 41349454 343 sSDLENVPHLRYLRLDGNYLK 363
Cdd:COG4886 266 -PPLANLTNLKTLDLSNNQLT 285
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
87-376 |
4.16e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.13 E-value: 4.16e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 87 LYCDSRNLRKVP-VIP--PRIHYLYLQNNFITELPvESFQNATGLRWINLDNNRIRKIDQrVLEKLPGLVFLYMEKNQLE 163
Cdd:COG4886 141 LDLSNNQLTDLPePLGnlTNLKSLDLSNNQLTDLP-EELGNLTNLKELDLSNNQITDLPE-PLGNLTNLEELDLSGNQLT 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 164 EVPSALPR--NLEQLRLSQNHISRIPpgvfsklenlllldlqhnrlsdgvfkpdtfhGLKNLMQLnlahnilrkmpprvp 241
Cdd:COG4886 219 DLPEPLANltNLETLDLSNNQLTDLP-------------------------------ELGNLTNL--------------- 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 242 taiHQLYLDSNKIETIPNgyFKSFPNLAFIRLNYNKLTDRGLPK--NSFNISNLLVLHLSHNRISSVPAINNRLEHLYLN 319
Cdd:COG4886 253 ---EELDLSNNQLTDLPP--LANLTNLKTLDLSNNQLTDLKLKEleLLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLL 327
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 41349454 320 NNSIEKINGTQICPNDLVAFHDFSSDLENVPHLRYLRLDGNYLKPPIPLDLMMCFRL 376
Cdd:COG4886 328 LLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLAL 384
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
203-370 |
1.28e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 68.81 E-value: 1.28e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 203 QHNRLSDGVFKPDTFHGLKNLMQLNLAHNIlrkmPPRVPTAIHQLYLDSNKIETIPNGyFKSFPNLAFIRLNYNKLTDrg 282
Cdd:COG4886 78 SLLLLSLLLLGLTDLGDLTNLTELDLSGNE----ELSNLTNLESLDLSGNQLTDLPEE-LANLTNLKELDLSNNQLTD-- 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 283 LPKNSFNISNLLVLHLSHNRISSVPA-INN--RLEHLYLNNNSIEkingtqicpndlvafhDFSSDLENVPHLRYLRLDG 359
Cdd:COG4886 151 LPEPLGNLTNLKSLDLSNNQLTDLPEeLGNltNLKELDLSNNQIT----------------DLPEPLGNLTNLEELDLSG 214
|
170
....*....|.
gi 41349454 360 NYLKpPIPLDL 370
Cdd:COG4886 215 NQLT-DLPEPL 224
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
133-353 |
2.84e-12 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 68.18 E-value: 2.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 133 LDNNRIRKIDqrvlEKLPG-LVFLYMEKNQLEEVPSALPRNLEQLRLSQNHISRIPPGVFSKLENLLLLdlqHNRLSdgv 211
Cdd:PRK15370 206 LDNNELKSLP----ENLQGnIKTLYANSNQLTSIPATLPDTIQEMELSINRITELPERLPSALQSLDLF---HNKIS--- 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 212 FKPDTFHglKNLMQLNLAHNILRKMPPRVPTAIHQLYLDSNKI----ETIPngyfksfPNLAFIRLNYNKLTD--RGLPk 285
Cdd:PRK15370 276 CLPENLP--EELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLtalpETLP-------PGLKTLEAGENALTSlpASLP- 345
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 41349454 286 nsfniSNLLVLHLSHNRISSVP-AINNRLEHLYLNNNSIekINGTQICPNDLVAFHDFSSDL----ENVPHLR 353
Cdd:PRK15370 346 -----PELQVLDVSKNQITVLPeTLPPTITTLDVSRNAL--TNLPENLPAALQIMQASRNNLvrlpESLPHFR 411
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
102-325 |
1.63e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 65.34 E-value: 1.63e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 102 PRIHYLYLQNNFITELPvESFQNATGLRWINLDNNRIRKIDQrVLEKLPGLVFLYMEKNQLEEVP--SALPrNLEQLRLS 179
Cdd:COG4886 182 TNLKELDLSNNQITDLP-EPLGNLTNLEELDLSGNQLTDLPE-PLANLTNLETLDLSNNQLTDLPelGNLT-NLEELDLS 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 180 QNHISRIPPgvFSKLENLLLLDLQHNRLSDGVFKPDTFHGLKNLMQLNLAHNILRKMPPRVPTAIHQLYLDSNKIETIPN 259
Cdd:COG4886 259 NNQLTDLPP--LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVT 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 41349454 260 GYFKSFPNLAFIRLNYNKLTDRGLPKNSFNISNLLVLHLSHNRISSVPAINNRLEHLYLNNNSIEK 325
Cdd:COG4886 337 LTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLL 402
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
103-360 |
4.03e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 62.11 E-value: 4.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 103 RIHYLYLQNNFITELPV-ESFQNatgLRWINLDNNRIRKIDQrvLEKLPGLVFLYMEKNQLEEVP--SALpRNLEQLRLS 179
Cdd:cd21340 3 RITHLYLNDKNITKIDNlSLCKN---LKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKIEnlENL-VNLKKLYLG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 180 QNHISRIppgvfsklenlllldlqhnrlsDGvfkpdtFHGLKNLMQLNLAHNILrkmPPRvptaiHQLYLDSNKIETIPN 259
Cdd:cd21340 77 GNRISVV----------------------EG------LENLTNLEELHIENQRL---PPG-----EKLTFDPRSLAALSN 120
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 260 gyfksfpnlafirlnynkltdrglpknsfnisNLLVLHLSHNRISSVPAINN--RLEHLYLNNNSIEKingtqicpndlv 337
Cdd:cd21340 121 --------------------------------SLRVLNISGNNIDSLEPLAPlrNLEQLDASNNQISD------------ 156
|
250 260
....*....|....*....|...
gi 41349454 338 aFHDFSSDLENVPHLRYLRLDGN 360
Cdd:cd21340 157 -LEELLDLLSSWPSLRELDLTGN 178
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
79-362 |
1.97e-10 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 62.49 E-value: 1.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 79 CPPDFPSALYCDSRNLRKVPVIPPRIHYLYLQNNFITELPVEsfqnATGLRWINLDNNRIRKidqrvLEKLP-GLVFLYM 157
Cdd:PRK15387 219 CLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVL----PPGLLELSIFSNPLTH-----LPALPsGLCKLWI 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 158 EKNQLEEVPsALPRNLEQLRLSQNHISRIP--PGVFSKLENLLLLDLQHNRLSDGvfkpdtfhglknLMQLNLAHNILRK 235
Cdd:PRK15387 290 FGNQLTSLP-VLPPGLQELSVSDNQLASLPalPSELCKLWAYNNQLTSLPTLPSG------------LQELSVSDNQLAS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 236 MPPrVPTAIHQLYLDSNKIETIPngyfksfpnlafirlnynkltdrGLPknsfniSNLLVLHLSHNRISSVPAINNRLEH 315
Cdd:PRK15387 357 LPT-LPSELYKLWAYNNRLTSLP-----------------------ALP------SGLKELIVSGNRLTSLPVLPSELKE 406
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 41349454 316 LYLNNNsieKINGTQICPNDLVAFHDFSSDLENVP----HLR---YLRLDGNYL 362
Cdd:PRK15387 407 LMVSGN---RLTSLPMLPSGLLSLSVYRNQLTRLPesliHLSsetTVNLEGNPL 457
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
102-162 |
4.23e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 55.22 E-value: 4.23e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 41349454 102 PRIHYLYLQNNFITELPVESFQNATGLRWINLDNNRIRKIDQRVLEKLPGLVFLYMEKNQL 162
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
89-346 |
3.79e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 58.71 E-value: 3.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 89 CDSRNLRKVPV--------IPP------RIHYLYLQNN-FITELPVEsFQNATGLRWINLDNNRIR-KIDQRVLEkLPGL 152
Cdd:PLN00113 377 CSSGNLFKLILfsnslegeIPKslgacrSLRRVRLQDNsFSGELPSE-FTKLPLVYFLDISNNNLQgRINSRKWD-MPSL 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 153 VFLYMEKNQ-LEEVP-SALPRNLEQLRLSQNHISRIPPGVFSKLENLLLLDLQHNRLSDGVfkPDTFHGLKNLMQLNLAH 230
Cdd:PLN00113 455 QMLSLARNKfFGGLPdSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEI--PDELSSCKKLVSLDLSH 532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 231 NILRKmpprvptaihqlyldsnkieTIPNGyFKSFPNLAFIRLNYNKLTDRgLPKNSFNISNLLVLHLSHNRI-SSVPAI 309
Cdd:PLN00113 533 NQLSG--------------------QIPAS-FSEMPVLSQLDLSQNQLSGE-IPKNLGNVESLVQVNISHNHLhGSLPST 590
|
250 260 270
....*....|....*....|....*....|....*..
gi 41349454 310 NNRLehlylnnnsieKINGTQICPNDLVAFHDFSSDL 346
Cdd:PLN00113 591 GAFL-----------AINASAVAGNIDLCGGDTTSGL 616
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
244-374 |
5.85e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 55.95 E-value: 5.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 244 IHQLYLDSNKIETIPNgyFKSFPNLAFIRLNYNKLTdrgLPKNSFNISNLLVLHLSHNRISSVPAINN--RLEHLYLNNN 321
Cdd:cd21340 4 ITHLYLNDKNITKIDN--LSLCKNLKVLYLYDNKIT---KIENLEFLTNLTHLYLQNNQIEKIENLENlvNLKKLYLGGN 78
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 41349454 322 SIEKINGtqicpndlvafhdfssdLENVPHLRYLRLDGNYLkppiPLDLMMCF 374
Cdd:cd21340 79 RISVVEG-----------------LENLTNLEELHIENQRL----PPGEKLTF 110
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
80-281 |
3.03e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 52.39 E-value: 3.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 80 PPDFPSAL-YCD--SRNLRKVPV-IPPRIHYLYLQNNFITELPvesfqnatglrwinldnnrirkidqrvlEKLP-GLVF 154
Cdd:PRK15370 278 PENLPEELrYLSvyDNSIRTLPAhLPSGITHLNVQSNSLTALP----------------------------ETLPpGLKT 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 155 LYMEKNQLEEVPSALPRNLEQLRLSQNHISRIPPGVfsklenlllldlqhnrlsdgvfkPDTfhglknLMQLNLAHNILR 234
Cdd:PRK15370 330 LEAGENALTSLPASLPPELQVLDVSKNQITVLPETL-----------------------PPT------ITTLDVSRNALT 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 41349454 235 KMPPRVPTAIHQLYLDSNKIETIPNG---YFKSFPNLAFIRLNYNKLTDR 281
Cdd:PRK15370 381 NLPENLPAALQIMQASRNNLVRLPESlphFRGEGPQPTRIIVEYNPFSER 430
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
144-363 |
1.26e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 49.66 E-value: 1.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 144 RVLEKLPGLVFLYMEKNQLEE-----VPSALPRN--LEQLRLSQNHISRIPPGVFSKLEN-LLLLDLQHNRLSDGVFKPD 215
Cdd:cd00116 17 ELLPKLLCLQVLRLEGNTLGEeaakaLASALRPQpsLKELCLSLNETGRIPRGLQSLLQGlTKGCGLQELDLSDNALGPD 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 216 TFHGLKNLMQ------LNLAHNILRKMPPR--------VPTAIHQLYLDSNKIE--------------------TIPNGY 261
Cdd:cd00116 97 GCGVLESLLRssslqeLKLNNNGLGDRGLRllakglkdLPPALEKLVLGRNRLEgascealakalranrdlkelNLANNG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 262 ------------FKSFPNLAFIRLNYNKLTDRG-------LPKNSFnisnLLVLHLSHNRISSVPA---------INNRL 313
Cdd:cd00116 177 igdagiralaegLKANCNLEVLDLNNNGLTDEGasalaetLASLKS----LEVLNLGDNNLTDAGAaalasallsPNISL 252
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 41349454 314 EHLYLNNNSIEkingtqicpndLVAFHDFSSDLENVPHLRYLRLDGNYLK 363
Cdd:cd00116 253 LTLSLSCNDIT-----------DDGAKDLAEVLAEKESLLELDLRGNKFG 291
|
|
| LRRNT |
smart00013 |
Leucine rich repeat N-terminal domain; |
72-107 |
2.38e-06 |
|
Leucine rich repeat N-terminal domain;
Pssm-ID: 214470 [Multi-domain] Cd Length: 33 Bit Score: 43.85 E-value: 2.38e-06
10 20 30
....*....|....*....|....*....|....*.
gi 41349454 72 DCPRECYCPPdfpSALYCDSRNLRKVPVIPPRIHYL 107
Cdd:smart00013 1 ACPAPCNCSG---TAVDCSGRGLTEVPLDLPPDTTL 33
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
102-370 |
2.95e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 49.46 E-value: 2.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 102 PRIHYLYLQNNFIT-ELPVESFQNATGLRWINLDNNRIRKIDQRvlEKLPGLVFLYMEKNQLE-EVPSALP--RNLEQLR 177
Cdd:PLN00113 93 PYIQTINLSNNQLSgPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSgEIPNDIGsfSSLKVLD 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 178 LSQNHISRIPPGVFSKLENLLLLDLQHNRLSDGVfkPDTFHGLKNLMQLNLAHNILRKmppRVPTAIHQL----YLD--- 250
Cdd:PLN00113 171 LGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQI--PRELGQMKSLKWIYLGYNNLSG---EIPYEIGGLtslnHLDlvy 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 251 SNKIETIPNGyFKSFPNLAFIRLNYNKLTDRgLPKNSFNISNLLVLHLSHNRIS-SVPAINNRLE-----HLYlNNNSIE 324
Cdd:PLN00113 246 NNLTGPIPSS-LGNLKNLQYLFLYQNKLSGP-IPPSIFSLQKLISLDLSDNSLSgEIPELVIQLQnleilHLF-SNNFTG 322
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 41349454 325 KINGTqicpndlvafhdfssdLENVPHLRYLRLDGNYLKPPIPLDL 370
Cdd:PLN00113 323 KIPVA----------------LTSLPRLQVLQLWSNKFSGEIPKNL 352
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
247-303 |
1.80e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.13 E-value: 1.80e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 41349454 247 LYLDSNKIETIPNGYFKSFPNLAFIRLNYNKLTdrGLPKNSF-NISNLLVLHLSHNRI 303
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT--TLSPGAFsGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
291-362 |
3.61e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.97 E-value: 3.61e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 41349454 291 SNLLVLHLSHNRISSVPAI----NNRLEHLYLNNNSIEKINGtqicpndlVAFHDFssdlenvPHLRYLRLDGNYL 362
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGafkgLSNLKVLDLSNNLLTTLSP--------GAFSGL-------PSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
171-231 |
2.43e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.66 E-value: 2.43e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 41349454 171 RNLEQLRLSQNHISRIPPGVFSKLENLLLLDLQHNRLSdgVFKPDTFHGLKNLMQLNLAHN 231
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT--TLSPGAFSGLPSLRYLDLSGN 59
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
266-323 |
2.82e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.66 E-value: 2.82e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 41349454 266 PNLAFIRLNYNKLTDrgLPKNSF-NISNLLVLHLSHNRISSVPAI----NNRLEHLYLNNNSI 323
Cdd:pfam13855 1 PNLRSLDLSNNRLTS--LDDGAFkGLSNLKVLDLSNNLLTTLSPGafsgLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
203-254 |
8.40e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.12 E-value: 8.40e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 41349454 203 QHNRLSdgVFKPDTFHGLKNLMQLNLAHNILRKMPPRV---PTAIHQLYLDSNKI 254
Cdd:pfam13855 9 SNNRLT--SLDDGAFKGLSNLKVLDLSNNLLTTLSPGAfsgLPSLRYLDLSGNRL 61
|
|
| LRRNT |
pfam01462 |
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ... |
72-102 |
9.41e-04 |
|
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.
Pssm-ID: 396168 [Multi-domain] Cd Length: 28 Bit Score: 36.45 E-value: 9.41e-04
10 20 30
....*....|....*....|....*....|.
gi 41349454 72 DCPRECYCPPdfpSALYCDSRNLRKVPVIPP 102
Cdd:pfam01462 1 ACPVPCHCSA---TVVNCSDRGLTAVPRDLP 28
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
111-377 |
1.16e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 40.99 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 111 NNFITELPVeSFQNATGLRWINLDNNRIRKIDQRVLEKLPGLVFLYMEKNQLE-EVPSALP--RNLEQLRLSQNHISRIP 187
Cdd:PLN00113 246 NNLTGPIPS-SLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSgEIPELVIqlQNLEILHLFSNNFTGKI 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 188 PGVFSKLENLLLLDLQHNRLSDGVfkPDTFHGLKNLMQLNLAHNILR-KMPPRVPTAIH--QLYLDSNKIET-IP----- 258
Cdd:PLN00113 325 PVALTSLPRLQVLQLWSNKFSGEI--PKNLGKHNNLTVLDLSTNNLTgEIPEGLCSSGNlfKLILFSNSLEGeIPkslga 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 259 -----------NGY-------FKSFPNLAFIRLNYNKLTDRgLPKNSFNISNLLVLHLSHNRIS-SVPAI--NNRLEHLY 317
Cdd:PLN00113 403 crslrrvrlqdNSFsgelpseFTKLPLVYFLDISNNNLQGR-INSRKWDMPSLQMLSLARNKFFgGLPDSfgSKRLENLD 481
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 318 LNNNsieKINGTqiCPNDLVAFhdfssdlenvPHLRYLRLDGNYLKPPIPLDLMMCFRLL 377
Cdd:PLN00113 482 LSRN---QFSGA--VPRKLGSL----------SELMQLKLSENKLSGEIPDELSSCKKLV 526
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
292-328 |
1.61e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 36.07 E-value: 1.61e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 41349454 292 NLLVLHLSHNRISSVPAINN--RLEHLYL-NNNSIEKING 328
Cdd:pfam12799 2 NLEVLDLSNNQITDIPPLAKlpNLETLDLsGNNKITDLSD 41
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
87-256 |
2.62e-03 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 39.53 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 87 LYCDSRNLRKVPVIP--PRIHYLYLQNNFITELPVESfqNATGLRWINLDNNRIRKIDQRVLEKLPGLVFLYMEKNQLEE 164
Cdd:COG4886 233 LDLSNNQLTDLPELGnlTNLEELDLSNNQLTDLPPLA--NLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNL 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 165 VPSALPRNLEQLRLSQNHISRIPPGVFSKLENLLLLDLQHNRLSDGVFKPDTFHGLKNLMQLNLAHNILRKMPPRVPTAI 244
Cdd:COG4886 311 LELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLL 390
|
170
....*....|..
gi 41349454 245 HQLYLDSNKIET 256
Cdd:COG4886 391 LLLLTTTAGVLL 402
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
239-323 |
4.72e-03 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 39.00 E-value: 4.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 239 RVPTAIHQLYLDSNKIETipNG------YFKSFPNLAFIRLNYNKLTDRG---LPKNSFNISNLLVLHLSHNRISSVPAI 309
Cdd:COG5238 261 KNNTTVETLYLSGNQIGA--EGaialakALQGNTTLTSLDLSVNRIGDEGaiaLAEGLQGNKTLHTLNLAYNGIGAQGAI 338
|
90 100
....*....|....*....|..
gi 41349454 310 --------NNRLEHLYLNNNSI 323
Cdd:COG5238 339 alakalqeNTTLHSLDLSDNQI 360
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
94-318 |
6.41e-03 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 38.70 E-value: 6.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 94 LRKVPVIPPRIHYLYLQNNFITELPvesfqnaTGLRWINLDN-----NRIRKIDQRV--LEKL-----PGLVFLYMEKNQ 161
Cdd:PLN03210 717 LKSFPDISTNISWLDLDETAIEEFP-------SNLRLENLDElilceMKSEKLWERVqpLTPLmtmlsPSLTRLFLSDIP 789
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 162 -LEEVPSALPR--NLEQLRLSQ-NHISRIPPGVfsklenlllldlqhnrlsdgvfkpdtfhGLKNLMQLNLAHNILRKMP 237
Cdd:PLN03210 790 sLVELPSSIQNlhKLEHLEIENcINLETLPTGI----------------------------NLESLESLDLSGCSRLRTF 841
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41349454 238 PRVPTAIHQLYLDSNKIETIPnGYFKSFPNLAFIRLNynklTDRGLPKNSFNISNLLVL------------HLSHNRISS 305
Cdd:PLN03210 842 PDISTNISDLNLSRTGIEEVP-WWIEKFSNLSFLDMN----GCNNLQRVSLNISKLKHLetvdfsdcgaltEASWNGSPS 916
|
250
....*....|...
gi 41349454 306 VPAINNRLEHLYL 318
Cdd:PLN03210 917 EVAMATDNIHSKL 929
|
|
|