|
Name |
Accession |
Description |
Interval |
E-value |
| KRAB |
smart00349 |
krueppel associated box; |
13-73 |
6.52e-33 |
|
krueppel associated box;
Pssm-ID: 214630 [Multi-domain] Cd Length: 61 Bit Score: 120.39 E-value: 6.52e-33
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 116256449 13 LTFRDVAIEFSLEEWQHLDIAQQNLYRNVMLENYRNLAFLGIAVSKPDLITCLEQGKEPWN 73
Cdd:smart00349 1 VTFEDVAVYFTQEEWEQLDPAQKNLYRDVMLENYSNLVSLGFQVPKPDLISQLEQGEEPWI 61
|
|
| KRAB |
pfam01352 |
KRAB box; The KRAB domain (or Kruppel-associated box) is present in about a third of zinc ... |
12-53 |
1.06e-20 |
|
KRAB box; The KRAB domain (or Kruppel-associated box) is present in about a third of zinc finger proteins containing C2H2 fingers. The KRAB domain is found to be involved in protein-protein interactions. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B. The A box plays an important role in repression by binding to corepressors, while the B box is thought to enhance this repression brought about by the A box. KRAB-containing proteins are thought to have critical functions in cell proliferation and differentiation, apoptosis and neoplastic transformation.
Pssm-ID: 460171 Cd Length: 42 Bit Score: 85.21 E-value: 1.06e-20
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 116256449 12 LLTFRDVAIEFSLEEWQHLDIAQQNLYRNVMLENYRNLAFLG 53
Cdd:pfam01352 1 SVTFEDVAVDFTQEEWALLDPAQRNLYRDVMLENYRNLVSLG 42
|
|
| KRAB_A-box |
cd07765 |
KRAB (Kruppel-associated box) domain -A box; The KRAB domain is a transcription repression ... |
13-52 |
2.98e-18 |
|
KRAB (Kruppel-associated box) domain -A box; The KRAB domain is a transcription repression module, found in a subgroup of the zinc finger proteins (ZFPs) of the C2H2 family, KRAB-ZFPs. KRAB-ZFPs comprise the largest group of transcriptional regulators in mammals, and are only found in tetrapods. These proteins have been shown to play important roles in cell differentiation and organ development, and in regulating viral replication and transcription. A KRAB domain may consist of an A-box, or of an A-box plus either a B-box, a divergent B-box (b), or a C-box. Only the A-box is included in this model. The A-box is needed for repression, the B- and C- boxes are not. KRAB-ZFPs have one or two KRAB domains at their amino-terminal end, and multiple C2H2 zinc finger motifs at their C-termini. Some KRAB-ZFPs also contain a SCAN domain which mediates homo- and hetero-oligomerization. The KRAB domain is a protein-protein interaction module which represses transcription through recruiting corepressors. A key mechanism appears to be the following: KRAB-AFPs tethered to DNA recruit, via their KRAB domain, the repressor KAP1 (KRAB-associated protein-1, also known as transcription intermediary factor 1 beta , KRAB-A interacting protein , and tripartite motif protein 28). The KAP1/ KRAB-AFP complex in turn recruits the heterochromatin protein 1 (HP1) family, and other chromatin modulating proteins, leading to transcriptional repression through heterochromatin formation.
Pssm-ID: 143639 Cd Length: 40 Bit Score: 78.36 E-value: 2.98e-18
10 20 30 40
....*....|....*....|....*....|....*....|
gi 116256449 13 LTFRDVAIEFSLEEWQHLDIAQQNLYRNVMLENYRNLAFL 52
Cdd:cd07765 1 VTFEDVAVYFSQEEWELLDPAQRDLYRDVMLENYENLVSL 40
|
|
| COG5048 |
COG5048 |
FOG: Zn-finger [General function prediction only]; |
264-625 |
1.35e-11 |
|
FOG: Zn-finger [General function prediction only];
Pssm-ID: 227381 [Multi-domain] Cd Length: 467 Bit Score: 67.03 E-value: 1.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 264 KLYKCEECGEAFNRSSNLTTHKIIHTGEKPYKC--EECGKAFIWSSTLTEHKKIHTRKKPYKCE-ECGKAFIWSSTLTRH 340
Cdd:COG5048 32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSkSLPLSNSKASSSSLS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 341 KRMHTGEKPYKCEECGKAFSQSSTLT--THKIIHTGEKRYK---------------------CLECGKAFKQLSTLTTHK 397
Cdd:COG5048 112 SSSSNSNDNNLLSSHSLPPSSRDPQLpdLLSISNLRNNPLPgnnsssvntpqsnslhpplpaNSLSKDPSSNLSLLISSN 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 398 IIHVGEKLYKCEECGKgFNRSSNLTTHKIIHTGEKPYKCEECGKAF-----IWSSTLTKHKRIHTREKP-YKCEECGKAF 471
Cdd:COG5048 192 VSTSIPSSSENSPLSS-SYSIPSSSSDQNLENSSSSLPLTTNSQLSpksllSQSPSSLSSSDSSSSASEsPRSSLPTASS 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 472 IWSSTLTRHKRMHTG-EKPYKCEECGKSFSQSSTLTTHK--IIHTGE--KPYKCEE--CGKAFNWSSTLTKHKIIHTEEK 544
Cdd:COG5048 271 QSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSIS 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 545 PYKC--EKCGKAFKQSSI-----LTNHKRIHTGEKPYKCE--ECGKSFNRSSTFTKHKVIHTGVKP--YKCEECGKAFFW 613
Cdd:COG5048 351 PAKEklLNSSSKFSPLLNneppqSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNR 430
|
410
....*....|..
gi 116256449 614 SSTLTKHKRIHT 625
Cdd:COG5048 431 HYNLIPHKKIHT 442
|
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
477-501 |
4.98e-05 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 40.43 E-value: 4.98e-05
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| KRAB |
smart00349 |
krueppel associated box; |
13-73 |
6.52e-33 |
|
krueppel associated box;
Pssm-ID: 214630 [Multi-domain] Cd Length: 61 Bit Score: 120.39 E-value: 6.52e-33
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 116256449 13 LTFRDVAIEFSLEEWQHLDIAQQNLYRNVMLENYRNLAFLGIAVSKPDLITCLEQGKEPWN 73
Cdd:smart00349 1 VTFEDVAVYFTQEEWEQLDPAQKNLYRDVMLENYSNLVSLGFQVPKPDLISQLEQGEEPWI 61
|
|
| KRAB |
pfam01352 |
KRAB box; The KRAB domain (or Kruppel-associated box) is present in about a third of zinc ... |
12-53 |
1.06e-20 |
|
KRAB box; The KRAB domain (or Kruppel-associated box) is present in about a third of zinc finger proteins containing C2H2 fingers. The KRAB domain is found to be involved in protein-protein interactions. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B. The A box plays an important role in repression by binding to corepressors, while the B box is thought to enhance this repression brought about by the A box. KRAB-containing proteins are thought to have critical functions in cell proliferation and differentiation, apoptosis and neoplastic transformation.
Pssm-ID: 460171 Cd Length: 42 Bit Score: 85.21 E-value: 1.06e-20
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 116256449 12 LLTFRDVAIEFSLEEWQHLDIAQQNLYRNVMLENYRNLAFLG 53
Cdd:pfam01352 1 SVTFEDVAVDFTQEEWALLDPAQRNLYRDVMLENYRNLVSLG 42
|
|
| KRAB_A-box |
cd07765 |
KRAB (Kruppel-associated box) domain -A box; The KRAB domain is a transcription repression ... |
13-52 |
2.98e-18 |
|
KRAB (Kruppel-associated box) domain -A box; The KRAB domain is a transcription repression module, found in a subgroup of the zinc finger proteins (ZFPs) of the C2H2 family, KRAB-ZFPs. KRAB-ZFPs comprise the largest group of transcriptional regulators in mammals, and are only found in tetrapods. These proteins have been shown to play important roles in cell differentiation and organ development, and in regulating viral replication and transcription. A KRAB domain may consist of an A-box, or of an A-box plus either a B-box, a divergent B-box (b), or a C-box. Only the A-box is included in this model. The A-box is needed for repression, the B- and C- boxes are not. KRAB-ZFPs have one or two KRAB domains at their amino-terminal end, and multiple C2H2 zinc finger motifs at their C-termini. Some KRAB-ZFPs also contain a SCAN domain which mediates homo- and hetero-oligomerization. The KRAB domain is a protein-protein interaction module which represses transcription through recruiting corepressors. A key mechanism appears to be the following: KRAB-AFPs tethered to DNA recruit, via their KRAB domain, the repressor KAP1 (KRAB-associated protein-1, also known as transcription intermediary factor 1 beta , KRAB-A interacting protein , and tripartite motif protein 28). The KAP1/ KRAB-AFP complex in turn recruits the heterochromatin protein 1 (HP1) family, and other chromatin modulating proteins, leading to transcriptional repression through heterochromatin formation.
Pssm-ID: 143639 Cd Length: 40 Bit Score: 78.36 E-value: 2.98e-18
10 20 30 40
....*....|....*....|....*....|....*....|
gi 116256449 13 LTFRDVAIEFSLEEWQHLDIAQQNLYRNVMLENYRNLAFL 52
Cdd:cd07765 1 VTFEDVAVYFSQEEWELLDPAQRDLYRDVMLENYENLVSL 40
|
|
| COG5048 |
COG5048 |
FOG: Zn-finger [General function prediction only]; |
264-625 |
1.35e-11 |
|
FOG: Zn-finger [General function prediction only];
Pssm-ID: 227381 [Multi-domain] Cd Length: 467 Bit Score: 67.03 E-value: 1.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 264 KLYKCEECGEAFNRSSNLTTHKIIHTGEKPYKC--EECGKAFIWSSTLTEHKKIHTRKKPYKCE-ECGKAFIWSSTLTRH 340
Cdd:COG5048 32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSkSLPLSNSKASSSSLS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 341 KRMHTGEKPYKCEECGKAFSQSSTLT--THKIIHTGEKRYK---------------------CLECGKAFKQLSTLTTHK 397
Cdd:COG5048 112 SSSSNSNDNNLLSSHSLPPSSRDPQLpdLLSISNLRNNPLPgnnsssvntpqsnslhpplpaNSLSKDPSSNLSLLISSN 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 398 IIHVGEKLYKCEECGKgFNRSSNLTTHKIIHTGEKPYKCEECGKAF-----IWSSTLTKHKRIHTREKP-YKCEECGKAF 471
Cdd:COG5048 192 VSTSIPSSSENSPLSS-SYSIPSSSSDQNLENSSSSLPLTTNSQLSpksllSQSPSSLSSSDSSSSASEsPRSSLPTASS 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 472 IWSSTLTRHKRMHTG-EKPYKCEECGKSFSQSSTLTTHK--IIHTGE--KPYKCEE--CGKAFNWSSTLTKHKIIHTEEK 544
Cdd:COG5048 271 QSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSIS 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 545 PYKC--EKCGKAFKQSSI-----LTNHKRIHTGEKPYKCE--ECGKSFNRSSTFTKHKVIHTGVKP--YKCEECGKAFFW 613
Cdd:COG5048 351 PAKEklLNSSSKFSPLLNneppqSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNR 430
|
410
....*....|..
gi 116256449 614 SSTLTKHKRIHT 625
Cdd:COG5048 431 HYNLIPHKKIHT 442
|
|
| COG5048 |
COG5048 |
FOG: Zn-finger [General function prediction only]; |
179-594 |
2.41e-11 |
|
FOG: Zn-finger [General function prediction only];
Pssm-ID: 227381 [Multi-domain] Cd Length: 467 Bit Score: 66.26 E-value: 2.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 179 KKSFKCKKRVKLFCMLSHKTQHKSIYHREKSYKC--KECGKTFNWSSTLTNHRKIYTEEKPYKCEeyNKSPKQLSTLTTH 256
Cdd:COG5048 31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNS--KSLPLSNSKASSS 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 257 EIIHAGEKLYKCE-ECGEAFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTEHKKIHTRKKPykcEECGKAFIWSS 335
Cdd:COG5048 109 SLSSSSSNSNDNNlLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLHPPLPAN---SLSKDPSSNLS 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 336 TLTRHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTgEKRYKCLECGKAFKQLST----LTTHKIIHVGEKLYKCEEC 411
Cdd:COG5048 186 LLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSLLsqspSSLSSSDSSSSASESPRSS 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 412 G--KGFNRSSNLTTHKIIHTG-EKPYKCEECGKAFIWSSTLTKHKR--IHTRE--KPYKCEE--CGKAFIWSSTLTRHKR 482
Cdd:COG5048 265 LptASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHIL 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 483 MHTGEKPYKC--EECGKSFSQSST-----LTTHKIIHTGEKPYKCE--ECGKAFNWSSTLTKHKIIHTEEKP--YKCEKC 551
Cdd:COG5048 345 LHTSISPAKEklLNSSSKFSPLLNneppqSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPC 424
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 116256449 552 GKAFKQSSILTNHKRIHTGEKPYKCEECGKSFNRSSTFTKHKV 594
Cdd:COG5048 425 SKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGKD 467
|
|
| COG5048 |
COG5048 |
FOG: Zn-finger [General function prediction only]; |
222-609 |
8.20e-11 |
|
FOG: Zn-finger [General function prediction only];
Pssm-ID: 227381 [Multi-domain] Cd Length: 467 Bit Score: 64.72 E-value: 8.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 222 SSTLTNHRKIYTEEKPYKCEEYNKSPKQLSTLTTHEIIHAGEKLYKC--EECGEAFNRSSNLTTHKIIHTGEKPYKCE-E 298
Cdd:COG5048 18 STPKSTLKSLSNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSkS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 299 CGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKAFSQSST-------------- 364
Cdd:COG5048 98 LPLSNSKASSSSLSSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQsnslhpplpansls 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 365 --------LTTHKIIHTGEKRYKCLECGKAFKQLSTLTTHKIIHVGEKLYKCEECG----KGFNRSSNLTTHKIIHTGEK 432
Cdd:COG5048 178 kdpssnlsLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSqlspKSLLSQSPSSLSSSDSSSSA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 433 PYKCEECG--KAFIWSSTLTKHKRIHTR-EKPYKCEECGKAFIWSSTLTRHKRM--HTGE--KPYKCEE--CGKSFSQSS 503
Cdd:COG5048 258 SESPRSSLptASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCPYslCGKLFSRND 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 504 TLTTHKIIHTGEKPYKCEEC-------GKAFNWSSTLTKHKIIHTEEKPYKCE--KCGKAFKQSSILTNHKRIHTGEKP- 573
Cdd:COG5048 338 ALKRHILLHTSISPAKEKLLnssskfsPLLNNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPy 417
|
410 420 430
....*....|....*....|....*....|....*..
gi 116256449 574 -YKCEECGKSFNRSSTFTKHKVIHTGVKPYKCEECGK 609
Cdd:COG5048 418 nCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKS 454
|
|
| COG5048 |
COG5048 |
FOG: Zn-finger [General function prediction only]; |
319-650 |
2.76e-10 |
|
FOG: Zn-finger [General function prediction only];
Pssm-ID: 227381 [Multi-domain] Cd Length: 467 Bit Score: 63.18 E-value: 2.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 319 KKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKC--EECGKAFSQSSTLTTHKIIHTGEKRYkcLECGKAFKQLSTLTTH 396
Cdd:COG5048 31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSD--LNSKSLPLSNSKASSS 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 397 KIIHVGEKLYKCE-ECGKGFNRSSNLTTHKIIHTGEKPYKCEEcgKAFIWSSTLTKH--KRIHTREKPykcEECGKAFIW 473
Cdd:COG5048 109 SLSSSSSNSNDNNlLSSHSLPPSSRDPQLPDLLSISNLRNNPL--PGNNSSSVNTPQsnSLHPPLPAN---SLSKDPSSN 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 474 SSTLTRHKRMHTGEKPYKCEECGKSFSQSSTLTTHKIIHTgEKPYKCEECGKAFN-----WSSTLTKHKIIHTEEKP-YK 547
Cdd:COG5048 184 LSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPksllsQSPSSLSSSDSSSSASEsPR 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 548 CEKCGKAFKQSSILTNHKRIHTG-EKPYKCEECGKSFNRSSTFTKHK--VIHTG--VKPYKCEE--CGKAFFWSSTLTKH 620
Cdd:COG5048 263 SSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLrsVNHSGesLKPFSCPYslCGKLFSRNDALKRH 342
|
330 340 350
....*....|....*....|....*....|....*.
gi 116256449 621 KRIHTGEQPYKW------EKFGKAFNRSSHLTTDKI 650
Cdd:COG5048 343 ILLHTSISPAKEkllnssSKFSPLLNNEPPQSLQQY 378
|
|
| COG5048 |
COG5048 |
FOG: Zn-finger [General function prediction only]; |
292-644 |
6.29e-09 |
|
FOG: Zn-finger [General function prediction only];
Pssm-ID: 227381 [Multi-domain] Cd Length: 467 Bit Score: 58.55 E-value: 6.29e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 292 KPYKCEECGKAFIWSSTLTEHKKIHTRKKPYKC--EECGKAFIWSSTLTRHKRMHTGEKPYkcEECGKAFSQSSTLTTHK 369
Cdd:COG5048 32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSD--LNSKSLPLSNSKASSSS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 370 IIHTGEKR-YKCLECGKAFKQLSTLTTHKIIHVGEKLYKCEECGKGFNRSSNLTTHKIIHTGEKPykcEECGKAFIWSST 448
Cdd:COG5048 110 LSSSSSNSnDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLHPPLPAN---SLSKDPSSNLSL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 449 LTKHKRIHTREKPYKCEECGKAFIWSSTLTRHKRMHTgEKPYKCEECGKSFSQSSTLTTHKIIHTGEKPYKCEECGKAFN 528
Cdd:COG5048 187 LISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 529 WSSTLTKHKIIHTEE-------KPYKCEKCGKAFKQSSILTNHKR--IHTGE--KPYKCEE--CGKSFNRSSTFTKHKVI 595
Cdd:COG5048 266 PTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILL 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 116256449 596 HTGVKPYKCeecgkafFWSSTLTKHKRIHTGE-----QPYKWEKFGKAFNRSSH 644
Cdd:COG5048 346 HTSISPAKE-------KLLNSSSKFSPLLNNEppqslQQYKDLKNDKKSETLSN 392
|
|
| SFP1 |
COG5189 |
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ... |
445-565 |
5.72e-06 |
|
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];
Pssm-ID: 227516 [Multi-domain] Cd Length: 423 Bit Score: 49.33 E-value: 5.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 445 WSSTLTKHKRIHTREKPYKCEECGKAFIWSSTL---TRHKRMHT-GEKPYKCE--ECGKSFSQSSTLTTHKiihtgekpy 518
Cdd:COG5189 301 IRGGISTGEMIDVRKLPCTNSSSNGKLAHGGERnidTPSRMLKVkDGKPYKCPveGCNKKYKNQNGLKYHM--------- 371
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 116256449 519 KCEECGKAFNWSSTLTKHKIIHTEEKPYKCEKCGKAFKQSSILTNHK 565
Cdd:COG5189 372 LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR 418
|
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
477-501 |
4.98e-05 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 40.43 E-value: 4.98e-05
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
337-361 |
5.82e-05 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 40.43 E-value: 5.82e-05
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
561-585 |
1.97e-04 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 38.89 E-value: 1.97e-04
|
| SFP1 |
COG5189 |
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ... |
305-425 |
9.22e-04 |
|
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];
Pssm-ID: 227516 [Multi-domain] Cd Length: 423 Bit Score: 42.01 E-value: 9.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116256449 305 WSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTL---TRHKRMHT-GEKPYKCE--ECGKAFSQSSTLTTHKIiHTgekry 378
Cdd:COG5189 301 IRGGISTGEMIDVRKLPCTNSSSNGKLAHGGERnidTPSRMLKVkDGKPYKCPveGCNKKYKNQNGLKYHML-HG----- 374
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 116256449 379 kclECGKAFKQLSTLTTHKIIHVGEKLYKCEECGKGFNRSSNLTTHK 425
Cdd:COG5189 375 ---HQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR 418
|
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
280-303 |
9.45e-04 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 36.97 E-value: 9.45e-04
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
420-443 |
9.45e-04 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 36.97 E-value: 9.45e-04
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
449-471 |
1.79e-03 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 36.20 E-value: 1.79e-03
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
505-528 |
1.92e-03 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 36.20 E-value: 1.92e-03
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
533-557 |
2.55e-03 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 35.81 E-value: 2.55e-03
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
309-331 |
5.22e-03 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 34.65 E-value: 5.22e-03
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
365-389 |
5.99e-03 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 34.65 E-value: 5.99e-03
|
|