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MULTISPECIES: translocation/assembly module TamB domain-containing protein [Elizabethkingia]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
817-1643
1.22e-61
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 226.84
E-value: 1.22e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 817 QHFTFSAKIKNDN L IRKFVP DL K --- DFETI TL N GN YD A D S QKIEV D GRI P Q L Q ygensiqggal KITNENQA L QYN L GV 893
Cdd:COG2911 70 DLVQATLDAEGLD L ASSALD DL D lrs GGNRL TL S GN LS A A S LDGDL D LDA P D L A ----------- DLAALLPG L AGS L SG 138
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 894 AS L K S S SL ALN kisvv G DV A DNTIN yn ITT K DTKDATRFLIA G KAKSLNNI T EIS L NP dglk LN YDD W TV A ENNRIQISS 973
Cdd:COG2911 139 DG L D S L SL DAD ----- G TL A QHRLD -- LDA K GEPASLSLALS G GLDRDDGG T LSR L DF ---- LN TGR W GL A APATLSYDD 207
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 974 KGILADNFR L SNA GS e IL L QSENNSPAS p L NVS LK DFKIETITEAIKK D s L LAK GT I NG T A Q L RDLTKKMTFTSD L NI S D 1053
Cdd:COG2911 208 GRVTLGPLC L AGG GS - LC L SGTLGGTLD - L QLR LK NLPLALLNPFLPD D - L GLS GT L NG D A D L SGGLANPQGDAS L SL S G 284
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1054 LMVYGSPV G NVAVKVKNNSA N I ------ L NA D VA L S G NDND - VKIL G DYNISA G ----- NF D M N MAINQ L QMKTVQGFSM 1121
Cdd:COG2911 285 DLTLNDGL G GLPLGLGDLTL N A rlangr L TL D LT L D G GGLG t LSLS G SVPLAD G lppsa PL D G N LRLDN L DLALLNPLLP 364
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1122 NAIHHTE G Y L S G N L K L T G STDK P NIL G KVKFNKVG L EIAKT G SDFRN I DDEID F TNRGIEFNRFKVKDKD G N a LT VN G Q V 1201
Cdd:COG2911 365 GVLERLS G Q L N G D L R L S G TLAA P QLN G QLTLDDGR L KLPAL G VRLTD I NLRLR F DGDRLTLDGLTADSGG G T - LT LS G T V 443
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1202 LTQNY r DFAFN L NVNARDFK V V N sek TN D AMMY gila IDAG L RIR G NL D L P KVE G RLA V aen TDFTFV LP QSS P ALQE rd 1281
Cdd:COG2911 444 DLDGL - SWPAD L TLKGDNLR V L N --- PP D YTAT ---- VSGD L TLT G TP D G P TLS G NVT V --- PRARIT LP ELP P SAVS -- 510
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1282 givef VDQ D Q VV L N KTIKTDSLNAQSRIK g M D VSV N IEVNKEAKM sividka N G DFVKLQGEAQ L TGGID P S G KTT L V G V 1361
Cdd:COG2911 511 ----- LSD D V VV V N RPPEPVPEEEAAGLP - L D LDL N VNLGDDVRV ------- R G FGLDARLGGD L RLTGT P G G APR L T G E 577
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1362 YEVEK G A Y EL svsm LKRKFD I QK GS t IT WT G E P TAAIM DI T AV YKTE tapidlveqqvnqgetnlfkqrm PFN A LLKMK G 1441
Cdd:COG2911 578 INLVR G R Y NA ---- YGQRLT I ER GS - IT FN G P P LDPYL DI E AV RTVD ----------------------- DVT A GVRVT G 629
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1442 ELLK P ILSFDI ttdennnsvatnvkqlvdaklaqlrqq E P EM - NKQVFA LLL LN R FIGE - NPFQSSAGL SA ETMARQSVS 1519
Cdd:COG2911 630 TASN P KITLFS --------------------------- D P AL p QDEILS LLL FG R GLDS l SGGDAAQLA SA AASLLGGGG 682
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1520 KI L SQ QL NNLA sdlik G V D l NFGLESTDD ystgnknt RTDLN V DIS K K l L N DRL K V TV G SNFGLEGQA rqnenmtniagd 1599
Cdd:COG2911 683 GG L LG QL GSAL ----- G L D - DLSIDTGGS -------- GDGTS V TVG K Y - L T DRL Y V SY G VGLFDGLSE ------------ 735
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 1173610448 1600 VT VD Y S L S R DGR ymlrayrkndyqva L QG Q I - VET G IGFIITLDY 1643
Cdd:COG2911 736 VT LR Y R L T R RLS -------------- L EA Q S g TGN G VDLLYRFEF 766
AsmA super family
cl34531 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
39-402
2.22e-10
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
COG2982 :Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 65.06
E-value: 2.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 39 N FIKDRLVVYLEKKIKTK V SLE --- KVYV t FP S - NLE L RNLY L --- K G QDVDT L LAVKK L DVG L NMMK L MNSTADITSVD 111
Cdd:COG2982 32 N RLRPLIERQVSEATGRE V TID gdl SLSL - FP W p GVT L GDVT L snp D G FGGPP L ASAER L ELD L ALLP L LSGELEVDEIT 110
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 112 L E G VNA N VV R NQK G KF N F D YIIN A F A TSDKE E S S SKPF ii SLNKIKLK D IGVTFK D QQ S KN D IQ L ------------- YF 178
Cdd:COG2982 111 L D G PVI N LE R DAD G RA N W D FLLA A A A AAADA E A S AWSL -- DIGRLEIT D GRLVYD D AA S GA D LT L ddlnltlsgpsld GP 188
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 179 NSFDTRVK ------------ TFD L QKNN Y AVN - D INLDG LRL K L KQDL - V A EVSKKVEKKVD SL NKQ --------- Q P MK 235
Cdd:COG2982 189 FRLSGSGR lngqpltldgki GGL L ALGP Y PLK l D LRSGD LRL S L DGTV d L A GLDGQLALSGP SL RDL lallgvtlp E P GP 268
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 236 IG L Q G -------- IK L TNFNIDY GD EN tktfakvlfke L STKVNQLDLENN A YNI D nvl LA GADIRA D LY LPA KKEDPKK 307
Cdd:COG2982 269 FS L S G rltadgdr LR L EDLKGTL GD SD ----------- L TGDLSVTGGDRP A LTG D --- LA SDRLDL D DL LPA APAAAAA 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 308 vq ESS A GSGKEKAMKVL L GN L NFN D VK V VYNNTAVVPN kq G MDYNH L NFS ------ R MNV D VRNFKMENNEFA G TVK --- 378
Cdd:COG2982 335 -- GAP A AARGLPDAPLD L SA L RAL D AD V RLSADSLKLG -- G LPLGD L AAH ltlddg R LDL D PLSAGLYGGTLS G SLT lda 410
410 420 430
....*....|....*....|....*....|
gi 1173610448 379 ----- SAEI K E S - K G L D IQR L TTNFTYESK 402
Cdd:COG2982 411 rgdpp RVAL K L S l S G V D LGP L LPDLAGFDR 440
TamB super family
cl34519 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
385-789
2.39e-03
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
COG2911 :Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 42.72
E-value: 2.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 385 SKG L D I QR L TTNFTYESKEAY L K NL Y L QT P KTV L R ------------ DEVVIGYDSVEQ L TANP G AVKVSA S IRD S KVGF 452
Cdd:COG2911 32 RGR L C I DE L ALSASLDGDRLR L D NL D L DA P EGA L S glldlvqatlda EGLDLASSALDD L DLRS G GNRLTL S GNL S AASL 111
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 453 SDI L N L - V P T L rntvpfnkyp NAVLLVNANAK GS vndlmiqn L KLS G I D Q L KVA A S G RIKNAM ------- N P DQ L YYD L K 524
Cdd:COG2911 112 DGD L D L d A P D L ---------- ADLAALLPGLA GS -------- L SGD G L D S L SLD A D G TLAQHR ldldakg E P AS L SLA L S 173
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 525 I G ELSSSDK T IYN L VPK NT IPSNISL P SFF S VKGIA kgttknvn TN L NLTSAF G NADVVAHVDMRRK nhel Y D VNAN L H N 604
Cdd:COG2911 174 G G LDRDDGG T LSR L DFL NT GRWGLAA P ATL S YDDGR -------- VT L GPLCLA G GGSLCLSGTLGGT ---- L D LQLR L K N 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 605 L QIGKIIQNKEV ----- G AITAKIAAK G EGFD P K s AK A DIKG ----- YVNSAVYKAYNYR D MD L TGKINH G VYS L A L NSK 674
Cdd:COG2911 242 L PLALLNPFLPD dlgls G TLNGDADLS G GLAN P Q - GD A SLSL sgdlt LNDGLGGLPLGLG D LT L NARLAN G RLT L D L TLD 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 675 DPNANM k L AA SG VYN ----- EKNPTVKV N GAITK LDL NK L GFYEKPMI -- VA G K L D GD FS --- N L NPDE LNG S L N L QNFA 744
Cdd:COG2911 321 GGGLGT - L SL SG SVP ladgl PPSAPLDG N LRLDN LDL AL L NPLLPGVL er LS G Q L N GD LR lsg T L AAPQ LNG Q L T L DDGR 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1173610448 745 ISDTKEVFP L QEV N FKAVSTK D S ne L N L NSQI AD ----- I TL T G KYK L TQ 789
Cdd:COG2911 400 LKLPALGVR L TDI N LRLRFDG D R -- L T L DGLT AD sgggt L TL S G TVD L DG 447
Name
Accession
Description
Interval
E-value
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
817-1643
1.22e-61
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 226.84
E-value: 1.22e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 817 QHFTFSAKIKNDN L IRKFVP DL K --- DFETI TL N GN YD A D S QKIEV D GRI P Q L Q ygensiqggal KITNENQA L QYN L GV 893
Cdd:COG2911 70 DLVQATLDAEGLD L ASSALD DL D lrs GGNRL TL S GN LS A A S LDGDL D LDA P D L A ----------- DLAALLPG L AGS L SG 138
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 894 AS L K S S SL ALN kisvv G DV A DNTIN yn ITT K DTKDATRFLIA G KAKSLNNI T EIS L NP dglk LN YDD W TV A ENNRIQISS 973
Cdd:COG2911 139 DG L D S L SL DAD ----- G TL A QHRLD -- LDA K GEPASLSLALS G GLDRDDGG T LSR L DF ---- LN TGR W GL A APATLSYDD 207
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 974 KGILADNFR L SNA GS e IL L QSENNSPAS p L NVS LK DFKIETITEAIKK D s L LAK GT I NG T A Q L RDLTKKMTFTSD L NI S D 1053
Cdd:COG2911 208 GRVTLGPLC L AGG GS - LC L SGTLGGTLD - L QLR LK NLPLALLNPFLPD D - L GLS GT L NG D A D L SGGLANPQGDAS L SL S G 284
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1054 LMVYGSPV G NVAVKVKNNSA N I ------ L NA D VA L S G NDND - VKIL G DYNISA G ----- NF D M N MAINQ L QMKTVQGFSM 1121
Cdd:COG2911 285 DLTLNDGL G GLPLGLGDLTL N A rlangr L TL D LT L D G GGLG t LSLS G SVPLAD G lppsa PL D G N LRLDN L DLALLNPLLP 364
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1122 NAIHHTE G Y L S G N L K L T G STDK P NIL G KVKFNKVG L EIAKT G SDFRN I DDEID F TNRGIEFNRFKVKDKD G N a LT VN G Q V 1201
Cdd:COG2911 365 GVLERLS G Q L N G D L R L S G TLAA P QLN G QLTLDDGR L KLPAL G VRLTD I NLRLR F DGDRLTLDGLTADSGG G T - LT LS G T V 443
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1202 LTQNY r DFAFN L NVNARDFK V V N sek TN D AMMY gila IDAG L RIR G NL D L P KVE G RLA V aen TDFTFV LP QSS P ALQE rd 1281
Cdd:COG2911 444 DLDGL - SWPAD L TLKGDNLR V L N --- PP D YTAT ---- VSGD L TLT G TP D G P TLS G NVT V --- PRARIT LP ELP P SAVS -- 510
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1282 givef VDQ D Q VV L N KTIKTDSLNAQSRIK g M D VSV N IEVNKEAKM sividka N G DFVKLQGEAQ L TGGID P S G KTT L V G V 1361
Cdd:COG2911 511 ----- LSD D V VV V N RPPEPVPEEEAAGLP - L D LDL N VNLGDDVRV ------- R G FGLDARLGGD L RLTGT P G G APR L T G E 577
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1362 YEVEK G A Y EL svsm LKRKFD I QK GS t IT WT G E P TAAIM DI T AV YKTE tapidlveqqvnqgetnlfkqrm PFN A LLKMK G 1441
Cdd:COG2911 578 INLVR G R Y NA ---- YGQRLT I ER GS - IT FN G P P LDPYL DI E AV RTVD ----------------------- DVT A GVRVT G 629
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1442 ELLK P ILSFDI ttdennnsvatnvkqlvdaklaqlrqq E P EM - NKQVFA LLL LN R FIGE - NPFQSSAGL SA ETMARQSVS 1519
Cdd:COG2911 630 TASN P KITLFS --------------------------- D P AL p QDEILS LLL FG R GLDS l SGGDAAQLA SA AASLLGGGG 682
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1520 KI L SQ QL NNLA sdlik G V D l NFGLESTDD ystgnknt RTDLN V DIS K K l L N DRL K V TV G SNFGLEGQA rqnenmtniagd 1599
Cdd:COG2911 683 GG L LG QL GSAL ----- G L D - DLSIDTGGS -------- GDGTS V TVG K Y - L T DRL Y V SY G VGLFDGLSE ------------ 735
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 1173610448 1600 VT VD Y S L S R DGR ymlrayrkndyqva L QG Q I - VET G IGFIITLDY 1643
Cdd:COG2911 736 VT LR Y R L T R RLS -------------- L EA Q S g TGN G VDLLYRFEF 766
TamB
pfam04357 TamB, inner membrane protein subunit of TAM complex; TamB is an integral inner membrane ...
1190-1643
2.42e-49
TamB, inner membrane protein subunit of TAM complex; TamB is an integral inner membrane protein that forms a complex - the translocation and assembly module or TAM - with the outer membrane protein, TamA. TAM is responsible for the efficient secretion of the adhesin protein Ag43 in E.coli K-12.
Pssm-ID: 461272 [Multi-domain]
Cd Length: 383
Bit Score: 180.68
E-value: 2.42e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1190 KD G NA LT V NG QVLTQNYR DF AFN L NVNARDFK V V N SE ktnda MMY G il AIDAG L RIR G N L DL P KVE G R L A V AEN T DFTFV 1269
Cdd:pfam04357 7 AN G GT LT L NG TISLESLK DF ELD L TLSLNNLL V Y N TK ----- DLR G -- TVSGD L TLK G T L NQ P VLS G E L T V PSA T ILLYE 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1270 LPQ S SP A l QE R D G I V E FVD QDQVVLNKTI KT DS ln AQSRIK G M D VSVNIEVNKEAKMS -- IVI D kan G DFVKLQGEAQ L T 1347
Cdd:pfam04357 80 AGD S EA A - SS R S G D V V FVD PESRTEEEPA KT AE -- DSGAPT G L D LPLLLFLDLKLSLG pd VRV D --- G PGLRAELTGD L Q 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1348 GGIDPS G KTT L V G VYE V EK G A Y EL svsm L KRK FD IQK G s TI T WT G E P TA - AIM DITA V Y KTETAP idlveqqvnqget NL 1426
Cdd:pfam04357 154 VNGTAN G RPS L F G SIR V TR G T Y NF ---- L GKT FD LDG G - EV T FS G D P PI d PTL DITA I Y TVNADS ------------- SQ 215
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1427 FKQ R M P FNAL L KMK G E L LK P ILSFDITT dennnsvatnvkqlvdaklaqlrqqe P EMNKQVFA LLLL N R FIGEN p FQSSA 1506
Cdd:pfam04357 216 YTG R D P VKVG L NVT G T L SS P TVTLSSEP -------------------------- P LPETEILS LLLL G R SLSDL - SSGQL 268
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1507 G LS A ETMARQSV S KI LS Q QLN N L A S D L ik G V D l N FG L E S TDDYST G NKNTRTD L N V DIS K K l L N DRL K V T VG SNF GL E G q 1586
Cdd:pfam04357 269 G AA A ASLLGSAG S GL LS G QLN K L R S A L -- G L D - N LS L G S ATSSTG G DVTSGGG L V V TVG K Y - L T DRL Y V S VG TGV GL G G - 343
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1173610448 1587 arqnenmt NIA GDV TVD Y S L SRDGRYMLRAYRKNDY qvalqgqiv E T G IGFIITL D Y 1643
Cdd:pfam04357 344 -------- SPT GDV SIE Y R L TPNLSLRAKTFNGQTD --------- E S G VDLSYKF D F 383
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
39-402
2.22e-10
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 65.06
E-value: 2.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 39 N FIKDRLVVYLEKKIKTK V SLE --- KVYV t FP S - NLE L RNLY L --- K G QDVDT L LAVKK L DVG L NMMK L MNSTADITSVD 111
Cdd:COG2982 32 N RLRPLIERQVSEATGRE V TID gdl SLSL - FP W p GVT L GDVT L snp D G FGGPP L ASAER L ELD L ALLP L LSGELEVDEIT 110
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 112 L E G VNA N VV R NQK G KF N F D YIIN A F A TSDKE E S S SKPF ii SLNKIKLK D IGVTFK D QQ S KN D IQ L ------------- YF 178
Cdd:COG2982 111 L D G PVI N LE R DAD G RA N W D FLLA A A A AAADA E A S AWSL -- DIGRLEIT D GRLVYD D AA S GA D LT L ddlnltlsgpsld GP 188
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 179 NSFDTRVK ------------ TFD L QKNN Y AVN - D INLDG LRL K L KQDL - V A EVSKKVEKKVD SL NKQ --------- Q P MK 235
Cdd:COG2982 189 FRLSGSGR lngqpltldgki GGL L ALGP Y PLK l D LRSGD LRL S L DGTV d L A GLDGQLALSGP SL RDL lallgvtlp E P GP 268
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 236 IG L Q G -------- IK L TNFNIDY GD EN tktfakvlfke L STKVNQLDLENN A YNI D nvl LA GADIRA D LY LPA KKEDPKK 307
Cdd:COG2982 269 FS L S G rltadgdr LR L EDLKGTL GD SD ----------- L TGDLSVTGGDRP A LTG D --- LA SDRLDL D DL LPA APAAAAA 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 308 vq ESS A GSGKEKAMKVL L GN L NFN D VK V VYNNTAVVPN kq G MDYNH L NFS ------ R MNV D VRNFKMENNEFA G TVK --- 378
Cdd:COG2982 335 -- GAP A AARGLPDAPLD L SA L RAL D AD V RLSADSLKLG -- G LPLGD L AAH ltlddg R LDL D PLSAGLYGGTLS G SLT lda 410
410 420 430
....*....|....*....|....*....|
gi 1173610448 379 ----- SAEI K E S - K G L D IQR L TTNFTYESK 402
Cdd:COG2982 411 rgdpp RVAL K L S l S G V D LGP L LPDLAGFDR 440
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
385-789
2.39e-03
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 42.72
E-value: 2.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 385 SKG L D I QR L TTNFTYESKEAY L K NL Y L QT P KTV L R ------------ DEVVIGYDSVEQ L TANP G AVKVSA S IRD S KVGF 452
Cdd:COG2911 32 RGR L C I DE L ALSASLDGDRLR L D NL D L DA P EGA L S glldlvqatlda EGLDLASSALDD L DLRS G GNRLTL S GNL S AASL 111
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 453 SDI L N L - V P T L rntvpfnkyp NAVLLVNANAK GS vndlmiqn L KLS G I D Q L KVA A S G RIKNAM ------- N P DQ L YYD L K 524
Cdd:COG2911 112 DGD L D L d A P D L ---------- ADLAALLPGLA GS -------- L SGD G L D S L SLD A D G TLAQHR ldldakg E P AS L SLA L S 173
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 525 I G ELSSSDK T IYN L VPK NT IPSNISL P SFF S VKGIA kgttknvn TN L NLTSAF G NADVVAHVDMRRK nhel Y D VNAN L H N 604
Cdd:COG2911 174 G G LDRDDGG T LSR L DFL NT GRWGLAA P ATL S YDDGR -------- VT L GPLCLA G GGSLCLSGTLGGT ---- L D LQLR L K N 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 605 L QIGKIIQNKEV ----- G AITAKIAAK G EGFD P K s AK A DIKG ----- YVNSAVYKAYNYR D MD L TGKINH G VYS L A L NSK 674
Cdd:COG2911 242 L PLALLNPFLPD dlgls G TLNGDADLS G GLAN P Q - GD A SLSL sgdlt LNDGLGGLPLGLG D LT L NARLAN G RLT L D L TLD 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 675 DPNANM k L AA SG VYN ----- EKNPTVKV N GAITK LDL NK L GFYEKPMI -- VA G K L D GD FS --- N L NPDE LNG S L N L QNFA 744
Cdd:COG2911 321 GGGLGT - L SL SG SVP ladgl PPSAPLDG N LRLDN LDL AL L NPLLPGVL er LS G Q L N GD LR lsg T L AAPQ LNG Q L T L DDGR 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1173610448 745 ISDTKEVFP L QEV N FKAVSTK D S ne L N L NSQI AD ----- I TL T G KYK L TQ 789
Cdd:COG2911 400 LKLPALGVR L TDI N LRLRFDG D R -- L T L DGLT AD sgggt L TL S G TVD L DG 447
AsmA
pfam05170 AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane ...
24-336
7.28e-03
AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.
Pssm-ID: 428346 [Multi-domain]
Cd Length: 607
Bit Score: 40.92
E-value: 7.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 24 FFSL L I L S L R L PVV ------ Q N FI K DR L VVYLEKKIKTKVSLEKV -- YVT FP S - N L E L RNLY L K -- GQ D VDT L LAVKKLD 92
Cdd:pfam05170 11 ILLG L L L L L V L LAA lialfd P N NY K PT L QQKVSAATNRPLAINGD ig RSL FP W p T L S L SDIT L A sp QG D ATP L VSLEQVK 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 93 VG L NMMK L MNSTAD I T S VD L E G VNANVV R NQK G KF N FDYI I -------- NA FATSDKEESSSKPFIISLNK I KLKDIG VT 164
Cdd:pfam05170 91 IS L SPLP L LRKQIE I D S IR L D G AELALE R LKQ G NW N WQEL I qnqqnqas NA PTQQPQPTWPVAAWSLPIGR I QVSNGQ VT 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 165 FK D QQ S kndi Q LYFNSFDTRVKTFD L QKNNYAVND I NLD G lrl K LK QD l VAEVSKK V EKKVD S LN - KQQPMK -------- 235
Cdd:pfam05170 171 ID D KA S ---- Q KILKDINLELQVST L YGPSFNWSK I TIS G --- K GD QD - PQSFGSQ V NVTIL S GE i SGEALR gststggm 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 236 IG LQ GIKLTNFN I DYGD -- ENTKTFAKV L FKE L STKVNQ LDL ENNAYNIDN V L LA ---- GA D IR A DLYL --------- P A 300
Cdd:pfam05170 243 LL LQ TLSSPIYH I NSLK ll NAQLELDGT L WDN L NLSIED LDL KASGWKSIT V N LA ltad EL D SL A NQAE lpganlpdt P Q 322
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1173610448 301 KKEDPKKV ---- QESSAG SG KEKAMKVL L GN L N F NDV K V V 336
Cdd:pfam05170 323 NITLGELS lsfk TGRVQV SG SLNSLTLN L DY L S F DGK K W V 362
Name
Accession
Description
Interval
E-value
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
817-1643
1.22e-61
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 226.84
E-value: 1.22e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 817 QHFTFSAKIKNDN L IRKFVP DL K --- DFETI TL N GN YD A D S QKIEV D GRI P Q L Q ygensiqggal KITNENQA L QYN L GV 893
Cdd:COG2911 70 DLVQATLDAEGLD L ASSALD DL D lrs GGNRL TL S GN LS A A S LDGDL D LDA P D L A ----------- DLAALLPG L AGS L SG 138
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 894 AS L K S S SL ALN kisvv G DV A DNTIN yn ITT K DTKDATRFLIA G KAKSLNNI T EIS L NP dglk LN YDD W TV A ENNRIQISS 973
Cdd:COG2911 139 DG L D S L SL DAD ----- G TL A QHRLD -- LDA K GEPASLSLALS G GLDRDDGG T LSR L DF ---- LN TGR W GL A APATLSYDD 207
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 974 KGILADNFR L SNA GS e IL L QSENNSPAS p L NVS LK DFKIETITEAIKK D s L LAK GT I NG T A Q L RDLTKKMTFTSD L NI S D 1053
Cdd:COG2911 208 GRVTLGPLC L AGG GS - LC L SGTLGGTLD - L QLR LK NLPLALLNPFLPD D - L GLS GT L NG D A D L SGGLANPQGDAS L SL S G 284
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1054 LMVYGSPV G NVAVKVKNNSA N I ------ L NA D VA L S G NDND - VKIL G DYNISA G ----- NF D M N MAINQ L QMKTVQGFSM 1121
Cdd:COG2911 285 DLTLNDGL G GLPLGLGDLTL N A rlangr L TL D LT L D G GGLG t LSLS G SVPLAD G lppsa PL D G N LRLDN L DLALLNPLLP 364
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1122 NAIHHTE G Y L S G N L K L T G STDK P NIL G KVKFNKVG L EIAKT G SDFRN I DDEID F TNRGIEFNRFKVKDKD G N a LT VN G Q V 1201
Cdd:COG2911 365 GVLERLS G Q L N G D L R L S G TLAA P QLN G QLTLDDGR L KLPAL G VRLTD I NLRLR F DGDRLTLDGLTADSGG G T - LT LS G T V 443
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1202 LTQNY r DFAFN L NVNARDFK V V N sek TN D AMMY gila IDAG L RIR G NL D L P KVE G RLA V aen TDFTFV LP QSS P ALQE rd 1281
Cdd:COG2911 444 DLDGL - SWPAD L TLKGDNLR V L N --- PP D YTAT ---- VSGD L TLT G TP D G P TLS G NVT V --- PRARIT LP ELP P SAVS -- 510
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1282 givef VDQ D Q VV L N KTIKTDSLNAQSRIK g M D VSV N IEVNKEAKM sividka N G DFVKLQGEAQ L TGGID P S G KTT L V G V 1361
Cdd:COG2911 511 ----- LSD D V VV V N RPPEPVPEEEAAGLP - L D LDL N VNLGDDVRV ------- R G FGLDARLGGD L RLTGT P G G APR L T G E 577
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1362 YEVEK G A Y EL svsm LKRKFD I QK GS t IT WT G E P TAAIM DI T AV YKTE tapidlveqqvnqgetnlfkqrm PFN A LLKMK G 1441
Cdd:COG2911 578 INLVR G R Y NA ---- YGQRLT I ER GS - IT FN G P P LDPYL DI E AV RTVD ----------------------- DVT A GVRVT G 629
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1442 ELLK P ILSFDI ttdennnsvatnvkqlvdaklaqlrqq E P EM - NKQVFA LLL LN R FIGE - NPFQSSAGL SA ETMARQSVS 1519
Cdd:COG2911 630 TASN P KITLFS --------------------------- D P AL p QDEILS LLL FG R GLDS l SGGDAAQLA SA AASLLGGGG 682
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1520 KI L SQ QL NNLA sdlik G V D l NFGLESTDD ystgnknt RTDLN V DIS K K l L N DRL K V TV G SNFGLEGQA rqnenmtniagd 1599
Cdd:COG2911 683 GG L LG QL GSAL ----- G L D - DLSIDTGGS -------- GDGTS V TVG K Y - L T DRL Y V SY G VGLFDGLSE ------------ 735
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 1173610448 1600 VT VD Y S L S R DGR ymlrayrkndyqva L QG Q I - VET G IGFIITLDY 1643
Cdd:COG2911 736 VT LR Y R L T R RLS -------------- L EA Q S g TGN G VDLLYRFEF 766
TamB
pfam04357 TamB, inner membrane protein subunit of TAM complex; TamB is an integral inner membrane ...
1190-1643
2.42e-49
TamB, inner membrane protein subunit of TAM complex; TamB is an integral inner membrane protein that forms a complex - the translocation and assembly module or TAM - with the outer membrane protein, TamA. TAM is responsible for the efficient secretion of the adhesin protein Ag43 in E.coli K-12.
Pssm-ID: 461272 [Multi-domain]
Cd Length: 383
Bit Score: 180.68
E-value: 2.42e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1190 KD G NA LT V NG QVLTQNYR DF AFN L NVNARDFK V V N SE ktnda MMY G il AIDAG L RIR G N L DL P KVE G R L A V AEN T DFTFV 1269
Cdd:pfam04357 7 AN G GT LT L NG TISLESLK DF ELD L TLSLNNLL V Y N TK ----- DLR G -- TVSGD L TLK G T L NQ P VLS G E L T V PSA T ILLYE 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1270 LPQ S SP A l QE R D G I V E FVD QDQVVLNKTI KT DS ln AQSRIK G M D VSVNIEVNKEAKMS -- IVI D kan G DFVKLQGEAQ L T 1347
Cdd:pfam04357 80 AGD S EA A - SS R S G D V V FVD PESRTEEEPA KT AE -- DSGAPT G L D LPLLLFLDLKLSLG pd VRV D --- G PGLRAELTGD L Q 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1348 GGIDPS G KTT L V G VYE V EK G A Y EL svsm L KRK FD IQK G s TI T WT G E P TA - AIM DITA V Y KTETAP idlveqqvnqget NL 1426
Cdd:pfam04357 154 VNGTAN G RPS L F G SIR V TR G T Y NF ---- L GKT FD LDG G - EV T FS G D P PI d PTL DITA I Y TVNADS ------------- SQ 215
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1427 FKQ R M P FNAL L KMK G E L LK P ILSFDITT dennnsvatnvkqlvdaklaqlrqqe P EMNKQVFA LLLL N R FIGEN p FQSSA 1506
Cdd:pfam04357 216 YTG R D P VKVG L NVT G T L SS P TVTLSSEP -------------------------- P LPETEILS LLLL G R SLSDL - SSGQL 268
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 1507 G LS A ETMARQSV S KI LS Q QLN N L A S D L ik G V D l N FG L E S TDDYST G NKNTRTD L N V DIS K K l L N DRL K V T VG SNF GL E G q 1586
Cdd:pfam04357 269 G AA A ASLLGSAG S GL LS G QLN K L R S A L -- G L D - N LS L G S ATSSTG G DVTSGGG L V V TVG K Y - L T DRL Y V S VG TGV GL G G - 343
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1173610448 1587 arqnenmt NIA GDV TVD Y S L SRDGRYMLRAYRKNDY qvalqgqiv E T G IGFIITL D Y 1643
Cdd:pfam04357 344 -------- SPT GDV SIE Y R L TPNLSLRAKTFNGQTD --------- E S G VDLSYKF D F 383
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
39-402
2.22e-10
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 65.06
E-value: 2.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 39 N FIKDRLVVYLEKKIKTK V SLE --- KVYV t FP S - NLE L RNLY L --- K G QDVDT L LAVKK L DVG L NMMK L MNSTADITSVD 111
Cdd:COG2982 32 N RLRPLIERQVSEATGRE V TID gdl SLSL - FP W p GVT L GDVT L snp D G FGGPP L ASAER L ELD L ALLP L LSGELEVDEIT 110
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 112 L E G VNA N VV R NQK G KF N F D YIIN A F A TSDKE E S S SKPF ii SLNKIKLK D IGVTFK D QQ S KN D IQ L ------------- YF 178
Cdd:COG2982 111 L D G PVI N LE R DAD G RA N W D FLLA A A A AAADA E A S AWSL -- DIGRLEIT D GRLVYD D AA S GA D LT L ddlnltlsgpsld GP 188
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 179 NSFDTRVK ------------ TFD L QKNN Y AVN - D INLDG LRL K L KQDL - V A EVSKKVEKKVD SL NKQ --------- Q P MK 235
Cdd:COG2982 189 FRLSGSGR lngqpltldgki GGL L ALGP Y PLK l D LRSGD LRL S L DGTV d L A GLDGQLALSGP SL RDL lallgvtlp E P GP 268
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 236 IG L Q G -------- IK L TNFNIDY GD EN tktfakvlfke L STKVNQLDLENN A YNI D nvl LA GADIRA D LY LPA KKEDPKK 307
Cdd:COG2982 269 FS L S G rltadgdr LR L EDLKGTL GD SD ----------- L TGDLSVTGGDRP A LTG D --- LA SDRLDL D DL LPA APAAAAA 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 308 vq ESS A GSGKEKAMKVL L GN L NFN D VK V VYNNTAVVPN kq G MDYNH L NFS ------ R MNV D VRNFKMENNEFA G TVK --- 378
Cdd:COG2982 335 -- GAP A AARGLPDAPLD L SA L RAL D AD V RLSADSLKLG -- G LPLGD L AAH ltlddg R LDL D PLSAGLYGGTLS G SLT lda 410
410 420 430
....*....|....*....|....*....|
gi 1173610448 379 ----- SAEI K E S - K G L D IQR L TTNFTYESK 402
Cdd:COG2982 411 rgdpp RVAL K L S l S G V D LGP L LPDLAGFDR 440
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
385-789
2.39e-03
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 42.72
E-value: 2.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 385 SKG L D I QR L TTNFTYESKEAY L K NL Y L QT P KTV L R ------------ DEVVIGYDSVEQ L TANP G AVKVSA S IRD S KVGF 452
Cdd:COG2911 32 RGR L C I DE L ALSASLDGDRLR L D NL D L DA P EGA L S glldlvqatlda EGLDLASSALDD L DLRS G GNRLTL S GNL S AASL 111
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 453 SDI L N L - V P T L rntvpfnkyp NAVLLVNANAK GS vndlmiqn L KLS G I D Q L KVA A S G RIKNAM ------- N P DQ L YYD L K 524
Cdd:COG2911 112 DGD L D L d A P D L ---------- ADLAALLPGLA GS -------- L SGD G L D S L SLD A D G TLAQHR ldldakg E P AS L SLA L S 173
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 525 I G ELSSSDK T IYN L VPK NT IPSNISL P SFF S VKGIA kgttknvn TN L NLTSAF G NADVVAHVDMRRK nhel Y D VNAN L H N 604
Cdd:COG2911 174 G G LDRDDGG T LSR L DFL NT GRWGLAA P ATL S YDDGR -------- VT L GPLCLA G GGSLCLSGTLGGT ---- L D LQLR L K N 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 605 L QIGKIIQNKEV ----- G AITAKIAAK G EGFD P K s AK A DIKG ----- YVNSAVYKAYNYR D MD L TGKINH G VYS L A L NSK 674
Cdd:COG2911 242 L PLALLNPFLPD dlgls G TLNGDADLS G GLAN P Q - GD A SLSL sgdlt LNDGLGGLPLGLG D LT L NARLAN G RLT L D L TLD 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 675 DPNANM k L AA SG VYN ----- EKNPTVKV N GAITK LDL NK L GFYEKPMI -- VA G K L D GD FS --- N L NPDE LNG S L N L QNFA 744
Cdd:COG2911 321 GGGLGT - L SL SG SVP ladgl PPSAPLDG N LRLDN LDL AL L NPLLPGVL er LS G Q L N GD LR lsg T L AAPQ LNG Q L T L DDGR 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1173610448 745 ISDTKEVFP L QEV N FKAVSTK D S ne L N L NSQI AD ----- I TL T G KYK L TQ 789
Cdd:COG2911 400 LKLPALGVR L TDI N LRLRFDG D R -- L T L DGLT AD sgggt L TL S G TVD L DG 447
AsmA
pfam05170 AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane ...
24-336
7.28e-03
AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.
Pssm-ID: 428346 [Multi-domain]
Cd Length: 607
Bit Score: 40.92
E-value: 7.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 24 FFSL L I L S L R L PVV ------ Q N FI K DR L VVYLEKKIKTKVSLEKV -- YVT FP S - N L E L RNLY L K -- GQ D VDT L LAVKKLD 92
Cdd:pfam05170 11 ILLG L L L L L V L LAA lialfd P N NY K PT L QQKVSAATNRPLAINGD ig RSL FP W p T L S L SDIT L A sp QG D ATP L VSLEQVK 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 93 VG L NMMK L MNSTAD I T S VD L E G VNANVV R NQK G KF N FDYI I -------- NA FATSDKEESSSKPFIISLNK I KLKDIG VT 164
Cdd:pfam05170 91 IS L SPLP L LRKQIE I D S IR L D G AELALE R LKQ G NW N WQEL I qnqqnqas NA PTQQPQPTWPVAAWSLPIGR I QVSNGQ VT 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 165 FK D QQ S kndi Q LYFNSFDTRVKTFD L QKNNYAVND I NLD G lrl K LK QD l VAEVSKK V EKKVD S LN - KQQPMK -------- 235
Cdd:pfam05170 171 ID D KA S ---- Q KILKDINLELQVST L YGPSFNWSK I TIS G --- K GD QD - PQSFGSQ V NVTIL S GE i SGEALR gststggm 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 236 IG LQ GIKLTNFN I DYGD -- ENTKTFAKV L FKE L STKVNQ LDL ENNAYNIDN V L LA ---- GA D IR A DLYL --------- P A 300
Cdd:pfam05170 243 LL LQ TLSSPIYH I NSLK ll NAQLELDGT L WDN L NLSIED LDL KASGWKSIT V N LA ltad EL D SL A NQAE lpganlpdt P Q 322
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1173610448 301 KKEDPKKV ---- QESSAG SG KEKAMKVL L GN L N F NDV K V V 336
Cdd:pfam05170 323 NITLGELS lsfk TGRVQV SG SLNSLTLN L DY L S F DGK K W V 362
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
707-1111
7.92e-03
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 40.79
E-value: 7.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 707 N KL GF YEK P MIV A GK L DG D FS --------------------- NL NP D E l N G SL N LQ nfaisdtkev F P L QEVNFK A VSTK 765
Cdd:COG2982 75 N PD GF GGP P LAS A ER L EL D LA llpllsgelevdeitldgpvi NL ER D A - D G RA N WD ---------- F L L AAAAAA A DAEA 143
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 766 DSNE L NLNS - Q I A D IT L T --- GKYKLTQIFGA L QQ T INQ yyqfqk P GKAQNIQ ------- P GQ HF T FSA KI KNDNLIRKF 834
Cdd:COG2982 144 SAWS L DIGR l E I T D GR L V ydd AASGADLTLDD L NL T LSG ------ P SLDGPFR lsgsgrl N GQ PL T LDG KI GGLLALGPY 217
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 835 VPD L K --- DFETIT L N G NY D ADSQKIEVDGRI P Q L QY ----- G ENSIQG G ALKI tne NQA L QYNLGVAS L KSSSLA L NKI 906
Cdd:COG2982 218 PLK L D lrs GDLRLS L D G TV D LAGLDGQLALSG P S L RD llall G VTLPEP G PFSL --- SGR L TADGDRLR L EDLKGT L GDS 294
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 907 SVV GD VADN ----- TINYNITT k D TK D ATRF L I A GK A KSLNNITEISLNPDGLK L NYDDWTVA e NNRIQI S SKGILADNF 981
Cdd:COG2982 295 DLT GD LSVT ggdrp ALTGDLAS - D RL D LDDL L P A AP A AAAAGAPAAARGLPDAP L DLSALRAL - DADVRL S ADSLKLGGL 372
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1173610448 982 R L SNAGSEIL L QSEN nspasp L NVSLKDFK ietiteaikkdsl L AK GT IN G TAQ L RDLTKKMTFTSD L NI S DL mvygs PV 1061
Cdd:COG2982 373 P L GDLAAHLT L DDGR ------ L DLDPLSAG ------------- L YG GT LS G SLT L DARGDPPRVALK L SL S GV ----- DL 428
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1173610448 1062 G NV -- AVKVKNNSANI LN A D VA LSG ND N D V KI L ----- G DYNI S A G N ----- FDMNMAINQL 1111
Cdd:COG2982 429 G PL lp DLAGFDRLSGT LN G D LD LSG TG N S V AA L lasln G SASL S L G D gaisg LNLEQLLRNA 490
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
