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Conserved domains on  [gi|124802227|ref|XP_001347408|]
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GMP synthase [glutamine-hydrolyzing] [Plasmodium falciparum 3D7]

Protein Classification

glutamine-hydrolyzing GMP synthase( domain architecture ID 11477919)

glutamine-hydrolyzing GMP synthase catalyzes the amination of the nucleotide precursor xanthosine 5'-monophosphate to form GMP

EC:  6.3.5.2
Gene Symbol:  guaA
Gene Ontology:  GO:0003922|GO:0006177|GO:0005524
PubMed:  8548458|10387030
SCOP:  4003747|4001196

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
guaA PRK00074
GMP synthase; Reviewed
7-555 0e+00

GMP synthase; Reviewed


:

Pssm-ID: 234614 [Multi-domain]  Cd Length: 511  Bit Score: 753.04  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   7 DKILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEYflekKIPIF 86
Cdd:PRK00074   4 DKILILDFGSQYTQLIARRVRELGVYSEIVPYDISAEEIRAFNPKGIILSGGPASVYEEGAPRADPEIFEL----GVPVL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  87 GICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILrndninnitycrnfgdsssamdlysnyklmnETCCLFENIKSDiTTV 166
Cdd:PRK00074  80 GICYGMQLMAHQLGGKVERAGKREYGRAELEVD-------------------------------NDSPLFKGLPEE-QDV 127
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 167 WMNHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCKKQFDPIRYHELELK 246
Cdd:PRK00074 128 WMSHGDKVTELPEGFKVIASTENCPIAAIANEERKFYGVQFHPEVTHTPQGKKLLENFVFDICGCKGDWTMENFIEEAIE 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 247 NIEKYKHDHYVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFpDMNITKIDASENFLSNL 326
Cdd:PRK00074 208 EIREQVGDKKVILGLSGGVDSSVAAVLLHKAIGDQLTCVFVDHGLLRKNEAEQVMEMFREHF-GLNLIHVDASDRFLSAL 286
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 327 QGVTDPEQKRKIIGKLFIEEFEKAVNNI-DIDinktFLLQGTLYPDIIESKcSKNLSDTIKTHHNVGGLPKNLKFKLFEP 405
Cdd:PRK00074 287 AGVTDPEEKRKIIGREFIEVFEEEAKKLgGVK----FLAQGTLYPDVIESG-GTKKAATIKSHHNVGGLPEDMKLKLVEP 361
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 406 FKYLFKDDVKTLSRELNLPEEITNRHPFPGPGLAIRVIGEINKHKLNILREVDDIFINDLKQYGLYNQISQAFAVLLSSK 485
Cdd:PRK00074 362 LRELFKDEVRKLGLELGLPEEIVYRHPFPGPGLAIRILGEVTKEKLDILREADAIFIEELRKAGLYDKIWQAFAVLLPVK 441
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 486 SVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDVSSKPPATIEFE 555
Cdd:PRK00074 442 SVGVMGDGRTYDYVVALRAVTSIDGMTADWARLPYDFLEKISNRIINEVKGVNRVVYDITSKPPATIEWE 511
 
Name Accession Description Interval E-value
guaA PRK00074
GMP synthase; Reviewed
7-555 0e+00

GMP synthase; Reviewed


Pssm-ID: 234614 [Multi-domain]  Cd Length: 511  Bit Score: 753.04  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   7 DKILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEYflekKIPIF 86
Cdd:PRK00074   4 DKILILDFGSQYTQLIARRVRELGVYSEIVPYDISAEEIRAFNPKGIILSGGPASVYEEGAPRADPEIFEL----GVPVL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  87 GICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILrndninnitycrnfgdsssamdlysnyklmnETCCLFENIKSDiTTV 166
Cdd:PRK00074  80 GICYGMQLMAHQLGGKVERAGKREYGRAELEVD-------------------------------NDSPLFKGLPEE-QDV 127
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 167 WMNHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCKKQFDPIRYHELELK 246
Cdd:PRK00074 128 WMSHGDKVTELPEGFKVIASTENCPIAAIANEERKFYGVQFHPEVTHTPQGKKLLENFVFDICGCKGDWTMENFIEEAIE 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 247 NIEKYKHDHYVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFpDMNITKIDASENFLSNL 326
Cdd:PRK00074 208 EIREQVGDKKVILGLSGGVDSSVAAVLLHKAIGDQLTCVFVDHGLLRKNEAEQVMEMFREHF-GLNLIHVDASDRFLSAL 286
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 327 QGVTDPEQKRKIIGKLFIEEFEKAVNNI-DIDinktFLLQGTLYPDIIESKcSKNLSDTIKTHHNVGGLPKNLKFKLFEP 405
Cdd:PRK00074 287 AGVTDPEEKRKIIGREFIEVFEEEAKKLgGVK----FLAQGTLYPDVIESG-GTKKAATIKSHHNVGGLPEDMKLKLVEP 361
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 406 FKYLFKDDVKTLSRELNLPEEITNRHPFPGPGLAIRVIGEINKHKLNILREVDDIFINDLKQYGLYNQISQAFAVLLSSK 485
Cdd:PRK00074 362 LRELFKDEVRKLGLELGLPEEIVYRHPFPGPGLAIRILGEVTKEKLDILREADAIFIEELRKAGLYDKIWQAFAVLLPVK 441
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 486 SVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDVSSKPPATIEFE 555
Cdd:PRK00074 442 SVGVMGDGRTYDYVVALRAVTSIDGMTADWARLPYDFLEKISNRIINEVKGVNRVVYDITSKPPATIEWE 511
GuaA2 COG0519
GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism]; GMP synthase, ...
7-555 0e+00

GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism]; GMP synthase, PP-ATPase domain/subunit is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 440285 [Multi-domain]  Cd Length: 512  Bit Score: 666.15  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   7 DKILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEyfleKKIPIF 86
Cdd:COG0519    4 EIIIVLDFGGQYQQLIARRRREEGVYSEIIPPDTAAEEIKAKGPPGIILSGGPSSVYEEGAPPDDPELFE----LGGPIL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  87 GICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNinnitycrnfgdsssamdlysnyklmnetccLFENIKSDiTTV 166
Cdd:COG0519   80 GICYGGQLMLHLLGGGVVRAERREYGGALLLVDDESD-------------------------------LFAGGPEE-LQV 127
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 167 WMNHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCKKQFDPIRYHELELK 246
Cdd:COG0519  128 WMSHGDRVTELPPGFEVIASTENCPVAAIANEERKLYGVQFHPEVVHTEQGKEILKNFLFDICGCKGDWTMENFIEEAIE 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 247 NI-EKYKHDHyVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFpDMNITKIDASENFLSN 325
Cdd:COG0519  208 EIrEQVGDGK-VICALSGGVDSSVAAALLHKAIGDQLTCVFVDHGLLRKGEAEQVEETFKEHF-GLNLIYVDASERFLSA 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 326 LQGVTDPEQKRKIIGKLFIEEFEKAVNNI-DIDinktFLLQGTLYPDIIESKCSKNLSDTIKTHHNVGGLPKNLKFKLFE 404
Cdd:COG0519  286 LKGVTDPEEKRKIIGEEFIEVFEEEAKKLgGAK----FLAQGTLYPDVIESGSVKGPAATIKSHHNVGGLPEDMKFKLVE 361
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 405 PFKYLFKDDVKTLSRELNLPEEITNRHPFPGPGLAIRVIGEINKHKLNILREVDDIFINDLKQYGLYNQISQAFAVLLSS 484
Cdd:COG0519  362 PLRELFKDEVRALGRELGLPEEIVYRHPFPGPGLAIRILGEVTKEKLEILREADAIFIEELRKAGLYDKVWQAFAVLLPV 441
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124802227 485 KSVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDVSSKPPATIEFE 555
Cdd:COG0519  442 KSVGVMGDERTYEYVVALRAVTSVDGMTADWARLPYEVLERISNRIINEVKGVNRVVYDITSKPPATIEWE 512
GMP_synthase_C cd01997
C-terminal domain of GMP synthetase (glutamine-hydrolyzing); The C-terminal domain of GMP ...
248-555 1.31e-174

C-terminal domain of GMP synthetase (glutamine-hydrolyzing); The C-terminal domain of GMP synthetase (glutamine-hydrolyzing, EC 6.3.5.2) contains two subdomains: the ATP pyrophosphatase domain at the N-terminal and the dimerization domain at the C-terminal end. The ATP-PPase domain is a twisted, five-stranded parallel beta-sheet sandwiched between helical layers. It has a signature nucleotide-binding motif, or PP-loop, at the end of the first-beta strand. GMP synthetase is a homodimer, but in some archaea, it is a heterodimer made up of ATP pyrophosphatase (ATP-PPase) and a GATase subunit. In eukaryotes and bacteria, the two catalytic units are encoded by a single gene producing a two-domain-type GMP with a GATase domain in the N-terminus and an ATP-PPase domain in the C-terminus.


Pssm-ID: 467501 [Multi-domain]  Cd Length: 311  Bit Score: 495.52  E-value: 1.31e-174
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 248 IEKYKHDHYVIAAMSGGIDSTVAAAYTHK-IFKERFFGIFIDNGLLRKNEAENVYTFLKSTFPdMNITKIDASENFLSNL 326
Cdd:cd01997    1 IKRTVGDKKVLCLVSGGVDSTVCAALLHKaLGDERVIAVHIDNGLMRKNESEQVEEALKKLGV-INLAKVDASKRFLKKL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 327 QGVTDPEQKRKIIGKLFIEEFEKAVNNIDIDINKTFLLQGTLYPDIIESKCSKNL--SDTIKTHHNVGGLPKNL-KFKLF 403
Cdd:cd01997   80 KGVTDPEEKRKIIGDTFIEVFDEVAKELNLDPDDVYLAQGTLYPDLIESASSLASskADTIKTHHNVGGLPRELlKGKLV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 404 EPFKYLFKDDVKTLSRELNLPEEITNRHPFPGPGLAIRVIGEINKHKLNILREVDDIFINDLKQYGLYNQISQAFAVLLS 483
Cdd:cd01997  160 EPLRDLFKDEVRELGRELGLPEELVWRHPFPGPGLAIRVLGEVTPEKLEILREADAIVEEELREAGLYDKISQAFAVLLP 239
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 124802227 484 SKSVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDVSSKPPATIEFE 555
Cdd:cd01997  240 IKSVGVQGDGRTYGYVVALRAVETEDFMTAEWARPPYEVLDKISNRITNEVPGVNRVVYDITSKPPATIEWE 311
guaA_Cterm TIGR00884
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; This protein of purine ...
242-555 2.00e-155

GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; This protein of purine de novo biosynthesis is well-conserved. However, it appears to split into two separate polypeptide chains in most of the Archaea. This C-terminal region would be the larger subunit [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273321 [Multi-domain]  Cd Length: 311  Bit Score: 446.79  E-value: 2.00e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  242 ELELKNIEKYKHDHYVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFpDMNITKIDASEN 321
Cdd:TIGR00884   4 EEAVEEIREQVGDAKVIIALSGGVDSSVAAVLAHRAIGDRLTCVFVDHGLLRKGEAEQVVKTFGDRL-GLNLVYVDAKER 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  322 FLSNLQGVTDPEQKRKIIGKLFIEEFEKAVNNI-DIDinktFLLQGTLYPDIIESKCSKnlSDTIKTHHNVGGLPKNLKF 400
Cdd:TIGR00884  83 FLSALKGVTDPEEKRKIIGRVFIEVFEREAKKIgDAE----YLAQGTIYPDVIESAAGT--AHVIKSHHNVGGLPEDMKL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  401 KLFEPFKYLFKDDVKTLSRELNLPEEITNRHPFPGPGLAIRVIGEINKHKLNILREVDDIFINDLKQYGLYNQISQAFAV 480
Cdd:TIGR00884 157 KLVEPLRELFKDEVRKLGKELGLPEEIVWRHPFPGPGLAVRVLGEVTKEKLEILRRADAIVIEELKKAGLYDKVWQAFAV 236
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 124802227  481 LLSSKSVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDVSSKPPATIEFE 555
Cdd:TIGR00884 237 LLPVKSVGVMGDGRTYGYVIALRAVESIDGMTADWARLPYDFLERISNRITNEVPGVNRVVYDITSKPPATIEWE 311
GMP_synt_C pfam00958
GMP synthase C terminal domain; GMP synthetase is a glutamine amidotransferase from the de ...
465-554 2.34e-54

GMP synthase C terminal domain; GMP synthetase is a glutamine amidotransferase from the de novo purine biosynthetic pathway. This family is the C-terminal domain specific to the GMP synthases EC:6.3.5.2. In prokaryotes this domain mediates dimerization. Eukaryotic GMP synthases are monomers. This domain in eukaryotes includes several large insertions that may form globular domains.


Pssm-ID: 425963 [Multi-domain]  Cd Length: 92  Bit Score: 178.37  E-value: 2.34e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  465 LKQYGLYNQISQAFAVLLSSKSVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDV 544
Cdd:pfam00958   3 IKKAGLYRKIWQAFAVLLPVKSVGVMGDERTYEYVVALRAVTSTDGMTADWARLPYEVLEKISNRIVNEVPGVNRVVYDI 82
                          90
                  ....*....|
gi 124802227  545 SSKPPATIEF 554
Cdd:pfam00958  83 TSKPPATIEW 92
 
Name Accession Description Interval E-value
guaA PRK00074
GMP synthase; Reviewed
7-555 0e+00

GMP synthase; Reviewed


Pssm-ID: 234614 [Multi-domain]  Cd Length: 511  Bit Score: 753.04  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   7 DKILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEYflekKIPIF 86
Cdd:PRK00074   4 DKILILDFGSQYTQLIARRVRELGVYSEIVPYDISAEEIRAFNPKGIILSGGPASVYEEGAPRADPEIFEL----GVPVL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  87 GICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILrndninnitycrnfgdsssamdlysnyklmnETCCLFENIKSDiTTV 166
Cdd:PRK00074  80 GICYGMQLMAHQLGGKVERAGKREYGRAELEVD-------------------------------NDSPLFKGLPEE-QDV 127
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 167 WMNHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCKKQFDPIRYHELELK 246
Cdd:PRK00074 128 WMSHGDKVTELPEGFKVIASTENCPIAAIANEERKFYGVQFHPEVTHTPQGKKLLENFVFDICGCKGDWTMENFIEEAIE 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 247 NIEKYKHDHYVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFpDMNITKIDASENFLSNL 326
Cdd:PRK00074 208 EIREQVGDKKVILGLSGGVDSSVAAVLLHKAIGDQLTCVFVDHGLLRKNEAEQVMEMFREHF-GLNLIHVDASDRFLSAL 286
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 327 QGVTDPEQKRKIIGKLFIEEFEKAVNNI-DIDinktFLLQGTLYPDIIESKcSKNLSDTIKTHHNVGGLPKNLKFKLFEP 405
Cdd:PRK00074 287 AGVTDPEEKRKIIGREFIEVFEEEAKKLgGVK----FLAQGTLYPDVIESG-GTKKAATIKSHHNVGGLPEDMKLKLVEP 361
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 406 FKYLFKDDVKTLSRELNLPEEITNRHPFPGPGLAIRVIGEINKHKLNILREVDDIFINDLKQYGLYNQISQAFAVLLSSK 485
Cdd:PRK00074 362 LRELFKDEVRKLGLELGLPEEIVYRHPFPGPGLAIRILGEVTKEKLDILREADAIFIEELRKAGLYDKIWQAFAVLLPVK 441
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 486 SVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDVSSKPPATIEFE 555
Cdd:PRK00074 442 SVGVMGDGRTYDYVVALRAVTSIDGMTADWARLPYDFLEKISNRIINEVKGVNRVVYDITSKPPATIEWE 511
GuaA2 COG0519
GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism]; GMP synthase, ...
7-555 0e+00

GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism]; GMP synthase, PP-ATPase domain/subunit is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 440285 [Multi-domain]  Cd Length: 512  Bit Score: 666.15  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   7 DKILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEyfleKKIPIF 86
Cdd:COG0519    4 EIIIVLDFGGQYQQLIARRRREEGVYSEIIPPDTAAEEIKAKGPPGIILSGGPSSVYEEGAPPDDPELFE----LGGPIL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  87 GICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNinnitycrnfgdsssamdlysnyklmnetccLFENIKSDiTTV 166
Cdd:COG0519   80 GICYGGQLMLHLLGGGVVRAERREYGGALLLVDDESD-------------------------------LFAGGPEE-LQV 127
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 167 WMNHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCKKQFDPIRYHELELK 246
Cdd:COG0519  128 WMSHGDRVTELPPGFEVIASTENCPVAAIANEERKLYGVQFHPEVVHTEQGKEILKNFLFDICGCKGDWTMENFIEEAIE 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 247 NI-EKYKHDHyVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFpDMNITKIDASENFLSN 325
Cdd:COG0519  208 EIrEQVGDGK-VICALSGGVDSSVAAALLHKAIGDQLTCVFVDHGLLRKGEAEQVEETFKEHF-GLNLIYVDASERFLSA 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 326 LQGVTDPEQKRKIIGKLFIEEFEKAVNNI-DIDinktFLLQGTLYPDIIESKCSKNLSDTIKTHHNVGGLPKNLKFKLFE 404
Cdd:COG0519  286 LKGVTDPEEKRKIIGEEFIEVFEEEAKKLgGAK----FLAQGTLYPDVIESGSVKGPAATIKSHHNVGGLPEDMKFKLVE 361
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 405 PFKYLFKDDVKTLSRELNLPEEITNRHPFPGPGLAIRVIGEINKHKLNILREVDDIFINDLKQYGLYNQISQAFAVLLSS 484
Cdd:COG0519  362 PLRELFKDEVRALGRELGLPEEIVYRHPFPGPGLAIRILGEVTKEKLEILREADAIFIEELRKAGLYDKVWQAFAVLLPV 441
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124802227 485 KSVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDVSSKPPATIEFE 555
Cdd:COG0519  442 KSVGVMGDERTYEYVVALRAVTSVDGMTADWARLPYEVLERISNRIINEVKGVNRVVYDITSKPPATIEWE 512
PLN02347 PLN02347
GMP synthetase
2-555 0e+00

GMP synthetase


Pssm-ID: 215197 [Multi-domain]  Cd Length: 536  Bit Score: 599.75  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   2 EGEEYDKILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEYFLEK 81
Cdd:PLN02347   6 AKSYLDVVLILDYGSQYTHLITRRVRELGVYSLLLSGTASLDRIASLNPRVVILSGGPHSVHVEGAPTVPEGFFDYCRER 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  82 KIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNdninnityCRNFGDSSSamdlysnyklmnetcclfenikS 161
Cdd:PLN02347  86 GVPVLGICYGMQLIVQKLGGEVKPGEKQEYGRMEIRVVCG--------SQLFGDLPS----------------------G 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 162 DITTVWMNHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCKKQFDPIRYH 241
Cdd:PLN02347 136 ETQTVWMSHGDEAVKLPEGFEVVAKSVQGAVVAIENRERRIYGLQYHPEVTHSPKGMETLRHFLFDVCGVTADWKMQDVL 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 242 ELELKNI-EKYKHDHYVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTflksTFPD---MNITKID 317
Cdd:PLN02347 216 EEQIELIkATVGPDEHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKEQERVME----TFKRdlhLPVTCVD 291
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 318 ASENFLSNLQGVTDPEQKRKIIGKLFIEEFEKAVNNIDIDINK--TFLLQGTLYPDIIESkCS-----KNLSDTIKTHHN 390
Cdd:PLN02347 292 ASERFLSKLKGVTDPEKKRKIIGAEFIEVFDEFAHKLEQKLGKkpAFLVQGTLYPDVIES-CPppgsgRTHSHTIKSHHN 370
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 391 VGGLPKNLKFKLFEPFKYLFKDDVKTLSRELNLPEEITNRHPFPGPGLAIRVIGEINK-HKLNILREVDDIFINDLKQYG 469
Cdd:PLN02347 371 VGGLPKDMKLKLIEPLKLLFKDEVRKLGRLLGVPEAFLKRHPFPGPGLAVRVLGDVTEgNALDILRQVDEIFINSIKDAG 450
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 470 LYNQISQAFAVLLSSKSVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDVSSKPP 549
Cdd:PLN02347 451 LYDEIWQAFAVFLPVKSVGVQGDQRTHSHVVALRAVTSEDGMTADWYHFEHKFLDDVSRKICNEVRGVNRVVYDITSKPP 530

                 ....*.
gi 124802227 550 ATIEFE 555
Cdd:PLN02347 531 STIEWE 536
GMP_synthase_C cd01997
C-terminal domain of GMP synthetase (glutamine-hydrolyzing); The C-terminal domain of GMP ...
248-555 1.31e-174

C-terminal domain of GMP synthetase (glutamine-hydrolyzing); The C-terminal domain of GMP synthetase (glutamine-hydrolyzing, EC 6.3.5.2) contains two subdomains: the ATP pyrophosphatase domain at the N-terminal and the dimerization domain at the C-terminal end. The ATP-PPase domain is a twisted, five-stranded parallel beta-sheet sandwiched between helical layers. It has a signature nucleotide-binding motif, or PP-loop, at the end of the first-beta strand. GMP synthetase is a homodimer, but in some archaea, it is a heterodimer made up of ATP pyrophosphatase (ATP-PPase) and a GATase subunit. In eukaryotes and bacteria, the two catalytic units are encoded by a single gene producing a two-domain-type GMP with a GATase domain in the N-terminus and an ATP-PPase domain in the C-terminus.


Pssm-ID: 467501 [Multi-domain]  Cd Length: 311  Bit Score: 495.52  E-value: 1.31e-174
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 248 IEKYKHDHYVIAAMSGGIDSTVAAAYTHK-IFKERFFGIFIDNGLLRKNEAENVYTFLKSTFPdMNITKIDASENFLSNL 326
Cdd:cd01997    1 IKRTVGDKKVLCLVSGGVDSTVCAALLHKaLGDERVIAVHIDNGLMRKNESEQVEEALKKLGV-INLAKVDASKRFLKKL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 327 QGVTDPEQKRKIIGKLFIEEFEKAVNNIDIDINKTFLLQGTLYPDIIESKCSKNL--SDTIKTHHNVGGLPKNL-KFKLF 403
Cdd:cd01997   80 KGVTDPEEKRKIIGDTFIEVFDEVAKELNLDPDDVYLAQGTLYPDLIESASSLASskADTIKTHHNVGGLPRELlKGKLV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 404 EPFKYLFKDDVKTLSRELNLPEEITNRHPFPGPGLAIRVIGEINKHKLNILREVDDIFINDLKQYGLYNQISQAFAVLLS 483
Cdd:cd01997  160 EPLRDLFKDEVRELGRELGLPEELVWRHPFPGPGLAIRVLGEVTPEKLEILREADAIVEEELREAGLYDKISQAFAVLLP 239
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 124802227 484 SKSVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDVSSKPPATIEFE 555
Cdd:cd01997  240 IKSVGVQGDGRTYGYVVALRAVETEDFMTAEWARPPYEVLDKISNRITNEVPGVNRVVYDITSKPPATIEWE 311
guaA_Cterm TIGR00884
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; This protein of purine ...
242-555 2.00e-155

GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; This protein of purine de novo biosynthesis is well-conserved. However, it appears to split into two separate polypeptide chains in most of the Archaea. This C-terminal region would be the larger subunit [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273321 [Multi-domain]  Cd Length: 311  Bit Score: 446.79  E-value: 2.00e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  242 ELELKNIEKYKHDHYVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFpDMNITKIDASEN 321
Cdd:TIGR00884   4 EEAVEEIREQVGDAKVIIALSGGVDSSVAAVLAHRAIGDRLTCVFVDHGLLRKGEAEQVVKTFGDRL-GLNLVYVDAKER 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  322 FLSNLQGVTDPEQKRKIIGKLFIEEFEKAVNNI-DIDinktFLLQGTLYPDIIESKCSKnlSDTIKTHHNVGGLPKNLKF 400
Cdd:TIGR00884  83 FLSALKGVTDPEEKRKIIGRVFIEVFEREAKKIgDAE----YLAQGTIYPDVIESAAGT--AHVIKSHHNVGGLPEDMKL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  401 KLFEPFKYLFKDDVKTLSRELNLPEEITNRHPFPGPGLAIRVIGEINKHKLNILREVDDIFINDLKQYGLYNQISQAFAV 480
Cdd:TIGR00884 157 KLVEPLRELFKDEVRKLGKELGLPEEIVWRHPFPGPGLAVRVLGEVTKEKLEILRRADAIVIEELKKAGLYDKVWQAFAV 236
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 124802227  481 LLSSKSVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDVSSKPPATIEFE 555
Cdd:TIGR00884 237 LLPVKSVGVMGDGRTYGYVIALRAVESIDGMTADWARLPYDFLERISNRITNEVPGVNRVVYDITSKPPATIEWE 311
GATase1_GMP_Synthase cd01742
Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase; Type 1 glutamine ...
9-225 7.86e-80

Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase; Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase. GMP synthetase is a glutamine amidotransferase from the de novo purine biosynthetic pathway. Glutamine amidotransferase (GATase) activity catalyse the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. GMP synthetase catalyses the amination of the nucleotide precursor xanthosine 5'-monophosphate to form GMP. GMP synthetase belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.


Pssm-ID: 153213 [Multi-domain]  Cd Length: 181  Bit Score: 248.22  E-value: 7.86e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   9 ILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEYflekKIPIFGI 88
Cdd:cd01742    1 ILILDFGSQYTHLIARRVRELGVYSEILPNTTPLEEIKLKNPKGIILSGGPSSVYEEDAPRVDPEIFEL----GVPVLGI 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  89 CYGMQEIAVQMNGEVKKSKTSEYGCTDVNILrndninnitycrnfgdsssamdlysnyklmnETCCLFENIkSDITTVWM 168
Cdd:cd01742   77 CYGMQLIAKALGGKVERGDKREYGKAEIEID-------------------------------DSSPLFEGL-PDEQTVWM 124
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 124802227 169 NHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFA 225
Cdd:cd01742  125 SHGDEVVKLPEGFKVIASSDNCPVAAIANEEKKIYGVQFHPEVTHTEKGKEILKNFL 181
guaA_Nterm TIGR00888
GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; This protein of purine ...
9-232 4.91e-66

GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; This protein of purine de novo biosynthesis is well-conserved. However, it appears to split into two separate polypeptide chains in most of the Archaea. This N-terminal region would be the smaller subunit. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 129966 [Multi-domain]  Cd Length: 188  Bit Score: 212.56  E-value: 4.91e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227    9 ILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEYflekKIPIFGI 88
Cdd:TIGR00888   1 ILVLDFGSQYTQLIARRLRELGVYSELVPNTTPLEEIREKNPKGIILSGGPSSVYAENAPRADEKIFEL----GVPVLGI 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   89 CYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNinnitycrnfgdsssamdlysnyklmnetccLFENIKSDItTVWM 168
Cdd:TIGR00888  77 CYGMQLMAKQLGGEVGRAEKREYGKAELEILDEDD-------------------------------LFRGLPDES-TVWM 124
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 124802227  169 NHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCK 232
Cdd:TIGR00888 125 SHGDKVKELPEGFKVLATSDNCPVAAMAHEEKPIYGVQFHPEVTHTEYGNELLENFVYDVCGCE 188
GMP_synt_C pfam00958
GMP synthase C terminal domain; GMP synthetase is a glutamine amidotransferase from the de ...
465-554 2.34e-54

GMP synthase C terminal domain; GMP synthetase is a glutamine amidotransferase from the de novo purine biosynthetic pathway. This family is the C-terminal domain specific to the GMP synthases EC:6.3.5.2. In prokaryotes this domain mediates dimerization. Eukaryotic GMP synthases are monomers. This domain in eukaryotes includes several large insertions that may form globular domains.


Pssm-ID: 425963 [Multi-domain]  Cd Length: 92  Bit Score: 178.37  E-value: 2.34e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  465 LKQYGLYNQISQAFAVLLSSKSVGVRGDARSYDYVCVLRAVKTSSFMTANWYQIPYDILDKITTRILSEVKGVNRILYDV 544
Cdd:pfam00958   3 IKKAGLYRKIWQAFAVLLPVKSVGVMGDERTYEYVVALRAVTSTDGMTADWARLPYEVLEKISNRIVNEVPGVNRVVYDI 82
                          90
                  ....*....|
gi 124802227  545 SSKPPATIEF 554
Cdd:pfam00958  83 TSKPPATIEW 92
PRK00758 PRK00758
GMP synthase subunit A; Validated
8-230 5.47e-47

GMP synthase subunit A; Validated


Pssm-ID: 179112 [Multi-domain]  Cd Length: 184  Bit Score: 162.33  E-value: 5.47e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   8 KILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNiKGVILSGGPySVTEAGSphlkkeVFEYFLEKKIPIFG 87
Cdd:PRK00758   1 KIVVVDNGGQYNHLIHRTLRYLGVDAKIIPNTTPVEEIKAFE-DGLILSGGP-DIERAGN------CPEYLKELDVPILG 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  88 ICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNInnitycrnfgdsssamdlysnyklmnetcclFENIkSDITTVW 167
Cdd:PRK00758  73 ICLGHQLIAKAFGGEVGRGEYGEYALVEVEILDEDDI-------------------------------LKGL-PPEIRVW 120
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 124802227 168 MNHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFaYNICK 230
Cdd:PRK00758 121 ASHADEVKELPDGFEILARSDICEVEAMKHKEKPIYGVQFHPEVAHTEYGEEIFKNF-LEICG 182
GuaA1 COG0518
GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; GMP ...
8-214 1.38e-38

GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; GMP synthase, glutamine amidotransferase domain is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 440284 [Multi-domain]  Cd Length: 225  Bit Score: 141.24  E-value: 1.38e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   8 KILVLN---FGSQYFHLIVKRLNNIKIFSETkdYGVELKDI----KDM-NIKGVILSGGPYSVTEAGsPHLKKE--VFEY 77
Cdd:COG0518    1 KILILDhdpFGGQYPGLIARRLREAGIELDV--LRVYAGEIlpydPDLeDPDGLILSGGPMSVYDED-PWLEDEpaLIRE 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  78 FLEKKIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNinnitycrnfgdsssamdlysnyklmnetccLFE 157
Cdd:COG0518   78 AFELGKPVLGICYGAQLLAHALGGKVEPGPGREIGWAPVELTEADP-------------------------------LFA 126
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 124802227 158 NIKSDItTVWMNHNDEVTKIPENFYLVSSSENCLICSIYNKEyNIYGVQYHPEVYES 214
Cdd:COG0518  127 GLPDEF-TVWMSHGDTVTELPEGAEVLASSDNCPNQAFRYGR-RVYGVQFHPEVTHT 181
GATase pfam00117
Glutamine amidotransferase class-I;
10-228 1.02e-33

Glutamine amidotransferase class-I;


Pssm-ID: 395067 [Multi-domain]  Cd Length: 188  Bit Score: 126.58  E-value: 1.02e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   10 LVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGsphLKKEVFEYFLEKKIPIFGIC 89
Cdd:pfam00117   1 LLIDNGDSFTYNLARALRELGVEVTVVPNDTPAEEILEENPDGIILSGGPGSPGAAG---GAIEAIREARELKIPILGIC 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   90 YGMQEIAVQMNGEVKKSKTSEYGctdvnilrndninnitycrnfgdsssamdlYSNYKLMNETCCLFENIKSDItTVWMN 169
Cdd:pfam00117  78 LGHQLLALAFGGKVVKAKKFGHH------------------------------GKNSPVGDDGCGLFYGLPNVF-IVRRY 126
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 124802227  170 HNDEVTK--IPENFYLVSSSEN-CLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNI 228
Cdd:pfam00117 127 HSYAVDPdtLPDGLEVTATSENdGTIMGIRHKKLPIFGVQFHPESILTPHGPEILFNFFIKA 188
PabA COG0512
Anthranilate/para-aminobenzoate synthase component II (glutamine amidotransferase) [Amino acid ...
40-224 1.01e-16

Anthranilate/para-aminobenzoate synthase component II (glutamine amidotransferase) [Amino acid transport and metabolism, Coenzyme transport and metabolism]; Anthranilate/para-aminobenzoate synthase component II (glutamine amidotransferase) is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 440278 [Multi-domain]  Cd Length: 189  Bit Score: 78.54  E-value: 1.01e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  40 VELKDIKDMNIKGVILSGGPYSVTEAGsphLKKEVFEYFlEKKIPIFGICYGMQEIAVQMNGEVKKS------KTSEygc 113
Cdd:COG0512   33 ITLEEIEALAPDGIVLSPGPGTPEEAG---ISLEVIRAF-AGKIPILGVCLGHQAIGEAFGGKVVRApepmhgKTSP--- 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 114 tdvniLRNDNinnitycrnfgdsssamdlysnyklmnetCCLFENIKSDIT-------TVwmnhndEVTKIPENFYLVSS 186
Cdd:COG0512  106 -----ITHDG-----------------------------SGLFAGLPNPFTatryhslVV------DRETLPDELEVTAW 145
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 124802227 187 SENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNF 224
Cdd:COG0512  146 TEDGEIMGIRHRELPIEGVQFHPESILTEHGHQLLANF 183
GATase1_1 cd01741
Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group ...
49-210 1.14e-15

Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153212 [Multi-domain]  Cd Length: 188  Bit Score: 75.36  E-value: 1.14e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  49 NIKGVILSGGPYSVTEAGSPHLKKEV-F-EYFLEKKIPIFGICYGMQEIAVQMNGEVKKS-KTSEYGCTDVNilRNDNIN 125
Cdd:cd01741   46 DYDGLVILGGPMSVDEDDYPWLKKLKeLiRQALAAGKPVLGICLGHQLLARALGGKVGRNpKGWEIGWFPVT--LTEAGK 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 126 NITYCRNFGDSSSAMdlysnyklmnetcclfeniksdittVWmnHNDEVTKIPENFYLVSSSENCLIcSIYNKEYNIYGV 205
Cdd:cd01741  124 ADPLFAGLPDEFPVF-------------------------HW--HGDTVVELPPGAVLLASSEACPN-QAFRYGDRALGL 175

                 ....*
gi 124802227 206 QYHPE 210
Cdd:cd01741  176 QFHPE 180
GATase1_Anthranilate_Synthase cd01743
Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase; Type 1 ...
10-224 2.63e-13

Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase; Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase (ASase). This group contains proteins similar to para-aminobenzoate (PABA) synthase and ASase. These enzymes catalyze similar reactions and produce similar products, PABA and ortho-aminobenzoate (anthranilate). Each enzyme is composed of non-identical subunits: a glutamine amidotransferase subunit (component II) and a subunit that produces an aminobenzoate products (component I). ASase catalyses the synthesis of anthranilate from chorismate and glutamine and is a tetrameric protein comprising two copies each of components I and II. Component II of ASase belongs to the family of triad GTases which hydrolyze glutamine and transfer nascent ammonia between the active sites. In some bacteria, such as Escherichia coli, component II can be much larger than in other organisms, due to the presence of phosphoribosyl-anthranilate transferase (PRTase) activity. PRTase catalyses the second step in tryptophan biosynthesis and results in the addition of 5-phosphoribosyl-1-pyrophosphate to anthranilate to create N-5'-phosphoribosyl-anthranilate. In E.coli, the first step in the conversion of chorismate to PABA involves two proteins: PabA and PabB which co-operate to transfer the amide nitrogen of glutamine to chorismate forming 4-amino-4 deoxychorismate (ADC). PabA acts as a glutamine amidotransferase, supplying an amino group to PabB, which carries out the amination reaction. A third protein PabC then mediates elimination of pyruvate and aromatization to give PABA. Several organisms have bipartite proteins containing fused domains homologous to PabA and PabB commonly called PABA synthases. These hybrid PABA synthases may produce ADC and not PABA.


Pssm-ID: 153214 [Multi-domain]  Cd Length: 184  Bit Score: 68.33  E-value: 2.63e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  10 LVLNFGSQYFHLIVKRLNNIKifsetkdygveLKDIKDMNIKGVILSGGPysvteaGSPH---LKKEVFEYFlEKKIPIF 86
Cdd:cd01743   14 LVQYLRELGAEVVVVRNDEIT-----------LEELELLNPDAIVISPGP------GHPEdagISLEIIRAL-AGKVPIL 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  87 GICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNInnitycrnfgdsssamdlysnyklmnetcclFENIKSDITTV 166
Cdd:cd01743   76 GVCLGHQAIAEAFGGKVVRAPEPMHGKTSEIHHDGSGL-------------------------------FKGLPQPFTVG 124
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 124802227 167 ----WMnhndeVTKIPENFYLV--SSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNF 224
Cdd:cd01743  125 ryhsLV-----VDPDPLPDLLEvtASTEDGVIMALRHRDLPIYGVQFHPESILTEYGLRLLENF 183
PRK05670 PRK05670
anthranilate synthase component II; Provisional
42-224 3.76e-12

anthranilate synthase component II; Provisional


Pssm-ID: 235552 [Multi-domain]  Cd Length: 189  Bit Score: 65.15  E-value: 3.76e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  42 LKDIKDMNIKGVILSGGPYSVTEAG-SPHLKKEvfeyfLEKKIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVniLR 120
Cdd:PRK05670  36 LEEIEALNPDAIVLSPGPGTPAEAGiSLELIRE-----FAGKVPILGVCLGHQAIGEAFGGKVVRAKEIMHGKTSP--IE 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 121 NDNinnitycrnfgdsssamdlysnyklmnetCCLFENIKSDITtVWMNHNDEVTK--IPENFYLVSSSENCLICSIYNK 198
Cdd:PRK05670 109 HDG-----------------------------SGIFAGLPNPFT-VTRYHSLVVDResLPDCLEVTAWTDDGEIMGVRHK 158
                        170       180
                 ....*....|....*....|....*.
gi 124802227 199 EYNIYGVQYHPEVYESLDGELMFYNF 224
Cdd:PRK05670 159 ELPIYGVQFHPESILTEHGHKLLENF 184
PRK14607 PRK14607
bifunctional anthranilate synthase component II/anthranilate phosphoribosyltransferase;
42-226 7.82e-11

bifunctional anthranilate synthase component II/anthranilate phosphoribosyltransferase;


Pssm-ID: 237764 [Multi-domain]  Cd Length: 534  Bit Score: 64.74  E-value: 7.82e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  42 LKDIKDMNIKGVILSGGPYSVTEAGsphLKKEVFEYFlEKKIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTdvnilrn 121
Cdd:PRK14607  37 IEEIEALNPSHIVISPGPGRPEEAG---ISVEVIRHF-SGKVPILGVCLGHQAIGYAFGGKIVHAKRILHGKT------- 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 122 dninnitycrnfgdssSAMDLYSNyklmnetcCLFENIKSDIT-TVWMNHNDEVTKIPENFYLVSSSENCLICSIYNKEY 200
Cdd:PRK14607 106 ----------------SPIDHNGK--------GLFRGIPNPTVaTRYHSLVVEEASLPECLEVTAKSDDGEIMGIRHKEH 161
                        170       180
                 ....*....|....*....|....*.
gi 124802227 201 NIYGVQYHPEVYESLDGELMFYNFAY 226
Cdd:PRK14607 162 PIFGVQFHPESILTEEGKRILKNFLN 187
PRK07649 PRK07649
aminodeoxychorismate/anthranilate synthase component II;
21-224 4.75e-10

aminodeoxychorismate/anthranilate synthase component II;


Pssm-ID: 181066 [Multi-domain]  Cd Length: 195  Bit Score: 59.05  E-value: 4.75e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  21 LIVKRLNNIKIfsetkdygvelKDIKDMNIKGVILSGGPYSVTEAGsphLKKEVFEYFlEKKIPIFGICYGMQEIAVQMN 100
Cdd:PRK07649  26 LVVKRNDEVTI-----------SDIENMKPDFLMISPGPCSPNEAG---ISMEVIRYF-AGKIPIFGVCLGHQSIAQVFG 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 101 GEVKKSKTSEYGCTDvnilrndninnitycrnfgdsssamdlysnyKLMNETCCLFENIKSDITTVwMNHNDEVTK--IP 178
Cdd:PRK07649  91 GEVVRAERLMHGKTS-------------------------------LMHHDGKTIFSDIPNPFTAT-RYHSLIVKKetLP 138
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 124802227 179 ENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNF 224
Cdd:PRK07649 139 DCLEVTSWTEEGEIMAIRHKTLPIEGVQFHPESIMTSHGKELLQNF 184
GATase1_CPSase cd01744
Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II; This ...
9-210 5.45e-10

Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II; This group of sequences represents the small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II. CPSase II catalyzes the production of carbomyl phosphate (CP) from bicarbonate, glutamine and two molecules of MgATP. The reaction is believed to proceed by a series of four biochemical reactions involving a minimum of three discrete highly reactive intermediates. The synthesis of CP is critical for the initiation of two separate biosynthetic pathways. In one CP is coupled to aspartate, its carbon and nitrogen nuclei ultimately incorporated into the aromatic moieties of pyrimidine nucleotides. In the second pathway CP is condensed with ornithine at the start of the urea cycle and is utilized for the detoxification of ammonia and biosynthesis of arginine. CPSases may be encoded by one or by several genes, depending on the species. The E.coli enzyme is a heterodimer consisting of two polypeptide chains referred to as the small and large subunit. Ammonia an intermediate during the biosynthesis of carbomyl phosphate produced by the hydrolysis of glutamine in the small subunit of the enzyme is delivered via a molecular tunnel between the remotely located carboxyphosphate active site in the large subunit. CPSase IIs belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. This group also contains the sequence from the mammalian urea cycle form which has lost the active site Cys, resulting in an ammonia-dependent form, CPSase I.


Pssm-ID: 153215 [Multi-domain]  Cd Length: 178  Bit Score: 58.66  E-value: 5.45e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   9 ILVLNFGSQyfHLIVKRLN----NIKIFSETKDYgvelKDIKDMNIKGVILSGGPysvteaGSPHLKKEVFEY---FLEK 81
Cdd:cd01744    1 VVVIDFGVK--HNILRELLkrgcEVTVVPYNTDA----EEILKLDPDGIFLSNGP------GDPALLDEAIKTvrkLLGK 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  82 KIPIFGICYGMQEIAVQMNGEVKKSKtseYGctdvnilrndninnitycrNFGdsssamdlysnyklMNETCCLFENIKS 161
Cdd:cd01744   69 KIPIFGICLGHQLLALALGAKTYKMK---FG-------------------HRG--------------SNHPVKDLITGRV 112
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 124802227 162 DITTvwMNHNDEVTK--IPENFYLVSSSEN-CLICSIYNKEYNIYGVQYHPE 210
Cdd:cd01744  113 YITS--QNHGYAVDPdsLPGGLEVTHVNLNdGTVEGIRHKDLPVFSVQFHPE 162
PRK12564 PRK12564
carbamoyl-phosphate synthase small subunit;
8-210 3.63e-09

carbamoyl-phosphate synthase small subunit;


Pssm-ID: 237139 [Multi-domain]  Cd Length: 360  Bit Score: 58.55  E-value: 3.63e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   8 KILVLNFGsqyfhliVKRlnNIkiFSETKDYGVEL---------KDIKDMNIKGVILSGGPysvteaGSPHLKKEVFE-- 76
Cdd:PRK12564 179 KVVAIDFG-------VKR--NI--LRELAERGCRVtvvpatttaEEILALNPDGVFLSNGP------GDPAALDYAIEmi 241
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  77 -YFLEKKIPIFGICYGMQEIAVQMNGEVKKSKtseygctdvnilrndninnitycrnFGDSSS---AMDLYSNyklmnet 152
Cdd:PRK12564 242 rELLEKKIPIFGICLGHQLLALALGAKTYKMK-------------------------FGHRGAnhpVKDLETG------- 289
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 124802227 153 cclfeniKSDITTvwMNHN---DEVTkIPENFYLvssSENCL----ICSIYNKEYNIYGVQYHPE 210
Cdd:PRK12564 290 -------KVEITS--QNHGfavDEDS-LPANLEV---THVNLndgtVEGLRHKDLPAFSVQYHPE 341
trpG CHL00101
anthranilate synthase component 2
40-224 1.06e-08

anthranilate synthase component 2


Pssm-ID: 214365 [Multi-domain]  Cd Length: 190  Bit Score: 55.12  E-value: 1.06e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  40 VELKDIKDMNIKGVILSGGPYSVTEAGsphLKKEVFEYFLEKkIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTdvnil 119
Cdd:CHL00101  34 IDLSKIKNLNIRHIIISPGPGHPRDSG---ISLDVISSYAPY-IPILGVCLGHQSIGYLFGGKIIKAPKPMHGKT----- 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 120 rndninNITYCRNFGdsssamdlysnyklmnetccLFENIKSDIT-TVWMNHNDEVTKIPENFYLVSSSENCLICSIYNK 198
Cdd:CHL00101 105 ------SKIYHNHDD--------------------LFQGLPNPFTaTRYHSLIIDPLNLPSPLEITAWTEDGLIMACRHK 158
                        170       180
                 ....*....|....*....|....*..
gi 124802227 199 EYN-IYGVQYHPEVYESLDGELMFYNF 224
Cdd:CHL00101 159 KYKmLRGIQFHPESLLTTHGQQILRNF 185
GATase1 cd01653
Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase ...
9-97 3.70e-08

Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA. and, the A4 beta-galactosidase middle domain. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153210 [Multi-domain]  Cd Length: 115  Bit Score: 51.83  E-value: 3.70e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   9 ILVLNFGSQY---FHLIVKRLN----NIKIFSETKDYGVELKDIKDmnIKGVILSGGPYSVTEAGSPHLKKEVFEYFLEK 81
Cdd:cd01653    1 VAVLLFPGFEeleLASPLDALReagaEVDVVSPDGGPVESDVDLDD--YDGLILPGGPGTPDDLARDEALLALLREAAAA 78
                         90
                 ....*....|....*.
gi 124802227  82 KIPIFGICYGMQEIAV 97
Cdd:cd01653   79 GKPILGICLGAQLLVL 94
GAT_1 cd03128
Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase ...
9-93 1.64e-07

Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA, the A4 beta-galactosidase middle domain and peptidase E. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase (CPSase), cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad of typical GATase1 domains, by having a Ser in place of the reactive Cys at the nucleophile elbow. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. Peptidase E has a circular permutation in the common core of a typical GTAse1 domain.


Pssm-ID: 153222 [Multi-domain]  Cd Length: 92  Bit Score: 49.12  E-value: 1.64e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   9 ILVLNFGSQY---FHLIVKRLN----NIKIFSETKDYGVELKDIKDmnIKGVILSGGPYSVTEAGSPHLKKEVFEYFLEK 81
Cdd:cd03128    1 VAVLLFGGSEeleLASPLDALReagaEVDVVSPDGGPVESDVDLDD--YDGLILPGGPGTPDDLAWDEALLALLREAAAA 78
                         90
                 ....*....|..
gi 124802227  82 KIPIFGICYGMQ 93
Cdd:cd03128   79 GKPVLGICLGAQ 90
GATase1_2 cd01745
Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group ...
49-101 3.24e-07

Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153216 [Multi-domain]  Cd Length: 189  Bit Score: 50.65  E-value: 3.24e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 124802227  49 NIKGVILSGG-----------PYSVTEAGSPhlKKEVFE-----YFLEKKIPIFGICYGMQEIAVQMNG 101
Cdd:cd01745   53 LLDGLLLTGGgdvdpplygeePHPELGPIDP--ERDAFElallrAALERGKPILGICRGMQLLNVALGG 119
CarA COG0505
Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism, Nucleotide ...
8-107 9.84e-07

Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism, Nucleotide transport and metabolism]; Carbamoylphosphate synthase small subunit is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 440271 [Multi-domain]  Cd Length: 361  Bit Score: 51.17  E-value: 9.84e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   8 KILVLNFGsqyfhliVKRlnNIkiFSETKDYGVELK---------DIKDMNIKGVILSGGPysvteaGSP-HLKK--EVF 75
Cdd:COG0505  178 HVVALDFG-------VKR--NI--LRELAERGCRVTvvpattsaeEILALNPDGVFLSNGP------GDPaALDYaiETI 240
                         90       100       110
                 ....*....|....*....|....*....|..
gi 124802227  76 EYFLEKKIPIFGICYGMQEIAVQMNGEVKKSK 107
Cdd:COG0505  241 RELLGKGIPIFGICLGHQLLALALGAKTYKLK 272
PuuD COG2071
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains ...
52-97 1.15e-06

Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains GATase1-like domain [Amino acid transport and metabolism];


Pssm-ID: 441674 [Multi-domain]  Cd Length: 231  Bit Score: 49.78  E-value: 1.15e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 124802227  52 GVILSGGP------YSvtEAGSPHLKK----------EVFEYFLEKKIPIFGICYGMQEIAV 97
Cdd:COG2071   52 GLVLTGGAdvdpalYG--EEPHPELGPidperdafelALIRAALERGKPVLGICRGMQLLNV 111
PRK08857 PRK08857
aminodeoxychorismate/anthranilate synthase component II;
40-224 1.20e-06

aminodeoxychorismate/anthranilate synthase component II;


Pssm-ID: 181566 [Multi-domain]  Cd Length: 193  Bit Score: 49.10  E-value: 1.20e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  40 VELKDIKDMNIKGVILSGGPYSVTEAGsphLKKEVFEYFLEKkIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTDvnil 119
Cdd:PRK08857  34 IDIDGIEALNPTHLVISPGPCTPNEAG---ISLQAIEHFAGK-LPILGVCLGHQAIAQVFGGQVVRARQVMHGKTS---- 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 120 rndninnitycrnfgdsssamdlysnyKLMNETCCLFENIKSDItTVWMNHNDEVTK--IPENFYLVSSSENC-----LI 192
Cdd:PRK08857 106 ---------------------------PIRHTGRSVFKGLNNPL-TVTRYHSLVVKNdtLPECFELTAWTELEdgsmdEI 157
                        170       180       190
                 ....*....|....*....|....*....|..
gi 124802227 193 CSIYNKEYNIYGVQYHPEVYESLDGELMFYNF 224
Cdd:PRK08857 158 MGFQHKTLPIEAVQFHPESIKTEQGHQLLANF 189
Peptidase_C26 pfam07722
Peptidase C26; These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze ...
49-210 2.00e-05

Peptidase C26; These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C terminus.


Pssm-ID: 429620 [Multi-domain]  Cd Length: 219  Bit Score: 46.10  E-value: 2.00e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   49 NIKGVILSGGP------YSV--TEAGSPH------LKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGevkksktSEYgcT 114
Cdd:pfam07722  58 RLDGLLLTGGPnvdphfYGEepSESGGPYdpardaYELALIRAALARGKPILGICRGFQLLNVALGG-------TLY--Q 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  115 DVNILrNDNINNITYCRNFGDSSS-AMDLysnyklmNETCCLFENIKSDITTVWMNHNDEVTKIPENFYLVSSSENCLI- 192
Cdd:pfam07722 129 DIQEQ-PGFTDHREHCQVAPYAPShAVNV-------EPGSLLASLLGSEEFRVNSLHHQAIDRLAPGLRVEAVAPDGTIe 200
                         170
                  ....*....|....*....
gi 124802227  193 -CSIYNKEYNIYGVQYHPE 210
Cdd:pfam07722 201 aIESPNAKGFALGVQWHPE 219
carA CHL00197
carbamoyl-phosphate synthase arginine-specific small subunit; Provisional
8-107 2.15e-05

carbamoyl-phosphate synthase arginine-specific small subunit; Provisional


Pssm-ID: 214392 [Multi-domain]  Cd Length: 382  Bit Score: 47.10  E-value: 2.15e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   8 KILVLNFGSQYFhlIVKRLNN----IKIFSETKDYgvelKDIKDMNIKGVILSGGPysvteaGSP---HLKKEVFEYFLE 80
Cdd:CHL00197 194 KIIVIDFGVKYN--ILRRLKSfgcsITVVPATSPY----QDILSYQPDGILLSNGP------GDPsaiHYGIKTVKKLLK 261
                         90       100
                 ....*....|....*....|....*..
gi 124802227  81 KKIPIFGICYGMQEIAVQMNGEVKKSK 107
Cdd:CHL00197 262 YNIPIFGICMGHQILSLALEAKTFKLK 288
PRK12838 PRK12838
carbamoyl phosphate synthase small subunit; Reviewed
8-105 3.74e-05

carbamoyl phosphate synthase small subunit; Reviewed


Pssm-ID: 183784 [Multi-domain]  Cd Length: 354  Bit Score: 46.04  E-value: 3.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227   8 KILVLNFGsqYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPysvteaGSPhlkKEVFEYF-----LEKK 82
Cdd:PRK12838 169 HVALIDFG--YKKSILRSLSKRGCKVTVLPYDTSLEEIKNLNPDGIVLSNGP------GDP---KELQPYLpeikkLISS 237
                         90       100
                 ....*....|....*....|...
gi 124802227  83 IPIFGICYGMQEIAVQMNGEVKK 105
Cdd:PRK12838 238 YPILGICLGHQLIALALGADTEK 260
PRK06774 PRK06774
aminodeoxychorismate synthase component II;
17-224 1.74e-04

aminodeoxychorismate synthase component II;


Pssm-ID: 180689 [Multi-domain]  Cd Length: 191  Bit Score: 42.93  E-value: 1.74e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  17 QYF-----HLIVKRLNNIkifsetkdygvELKDIKDMNIKGVILSGGPYSVTEAGsphLKKEVFEYFLEKkIPIFGICYG 91
Cdd:PRK06774  17 QYFcelgtEVMVKRNDEL-----------QLTDIEQLAPSHLVISPGPCTPNEAG---ISLAVIRHFADK-LPILGVCLG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  92 MQEIAVQMNGEVKKSKTSEYGCTDVnilrndninnITYCRN--FGDSSSAMDLYSNYKLMNETCCL---FEniksdiTTV 166
Cdd:PRK06774  82 HQALGQAFGARVVRARQVMHGKTSA----------ICHSGQgvFRGLNQPLTVTRYHSLVIAADSLpgcFE------LTA 145
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 124802227 167 WMNHNDEVTKipenfylvsssenclICSIYNKEYNIYGVQYHPEVYESLDGELMFYNF 224
Cdd:PRK06774 146 WSERGGEMDE---------------IMGIRHRTLPLEGVQFHPESILSEQGHQLLDNF 188
PRK07765 PRK07765
aminodeoxychorismate/anthranilate synthase component II;
52-223 4.84e-04

aminodeoxychorismate/anthranilate synthase component II;


Pssm-ID: 181107 [Multi-domain]  Cd Length: 214  Bit Score: 41.57  E-value: 4.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  52 GVILSGGPYSVTEAGsphLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKS------KTSEYGCTDVNILRnDNIN 125
Cdd:PRK07765  49 GVLLSPGPGTPERAG---ASIDMVRACAAAGTPLLGVCLGHQAIGVAFGATVDRApellhgKTSSVHHTGVGVLA-GLPD 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 126 NITYCRnfgdsssamdlYSNYKLMNETcclfeniksdittvwmnhndevtkIPENFYLVSSSENCLICSIYNKEYNIYGV 205
Cdd:PRK07765 125 PFTATR-----------YHSLTILPET------------------------LPAELEVTARTDSGVIMAVRHRELPIHGV 169
                        170
                 ....*....|....*...
gi 124802227 206 QYHPEVYESLDGELMFYN 223
Cdd:PRK07765 170 QFHPESVLTEGGHRMLAN 187
AANH-like cd01986
adenine nucleotide alpha hydrolase (AANH)-like proteins; This group of adenine nucleotide ...
257-300 5.08e-04

adenine nucleotide alpha hydrolase (AANH)-like proteins; This group of adenine nucleotide alpha hydrolase (AANH)-like proteins includes N-type ATP PPases and ATP sulfurylases. The domain forms an alpha/beta/alpha fold which binds to adenosine nucleotide.


Pssm-ID: 467490 [Multi-domain]  Cd Length: 74  Bit Score: 38.97  E-value: 5.08e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 124802227 257 VIAAMSGGIDSTVAAAYTHK-IFKERFFGIFIDNGLLRKNEAENV 300
Cdd:cd01986    1 VVVGYSGGKDSSVALHLASRlGRKAEVAVVHIDHGIGFKEEAESV 45
PRK08557 PRK08557
hypothetical protein; Provisional
214-327 9.60e-04

hypothetical protein; Provisional


Pssm-ID: 181465 [Multi-domain]  Cd Length: 417  Bit Score: 41.66  E-value: 9.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 214 SLDGELMFYNFAYNICKCKKQFDPIRYHELEL--KNIEKYKHDHYVI-AAMSGGIDSTVAAAYTHKIFKErFFGIFIDNG 290
Cdd:PRK08557 138 SLKKELDFEKIEDYLEKNKERIEKLEENSLSIlkDYIEKYKNKGYAInASFSGGKDSSVSTLLAKEVIPD-LEVIFIDTG 216
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 124802227 291 LLRKNEAENVYTFLKSTfpDMNITKIDaSENFLSNLQ 327
Cdd:PRK08557 217 LEYPETINYVKDFAKKY--DLNLDTLD-GDNFWENLE 250
puuD PRK11366
gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional
50-101 1.48e-03

gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional


Pssm-ID: 183101 [Multi-domain]  Cd Length: 254  Bit Score: 40.65  E-value: 1.48e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 124802227  50 IKGVILSGGPYSVteagSPHLKKE-----------------VFEYFLEKKIPIFGICYGMQEIAVQMNG 101
Cdd:PRK11366  62 LDGIYLPGSPSNV----QPHLYGEngdepdadpgrdllsmaLINAALERRIPIFAICRGLQELVVATGG 126
GATase1_Glutamyl_Hydrolase cd01747
Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase; Type 1 ...
50-210 2.39e-03

Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase; Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase. gamma-Glutamyl Hydrolase catalyzes the cleavage of the gamma-glutamyl chain of folylpoly-gamma-glutamyl substrates and is a central enzyme in folyl and antifolyl poly-gamma-glutamate metabolism. GATase activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. gamma-Glutamyl hydrolases belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.


Pssm-ID: 153218 [Multi-domain]  Cd Length: 273  Bit Score: 40.00  E-value: 2.39e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227  50 IKGVILSGGpySVTEAGSPHLK--KEVFEYFLEKKI-----PIFGICYGMQEIAVQMNGEVkksktseygctdvNILRND 122
Cdd:cd01747   55 INGILFPGG--AVDIDTSGYARtaKIIYNLALERNDagdyfPVWGTCLGFELLTYLTSGET-------------LLLEAT 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802227 123 NINNItycrnfgdsSSAMDLYSNYKlmneTCCLFENIKSDITT-------VWMNH-------NDEVTKIPENFYLVSS-- 186
Cdd:cd01747  120 EATNS---------ALPLNFTEDAL----QSRLFKRFPPDLLKslateplTMNNHrygispeNFTENGLLSDFFNVLTtn 186
                        170       180
                 ....*....|....*....|....*..
gi 124802227 187 ---SENCLICSIYNKEYNIYGVQYHPE 210
Cdd:cd01747  187 ddwNGVEFISTVEAYKYPIYGVQWHPE 213
MnmA COG0482
tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain [Translation, ...
257-272 2.86e-03

tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]; tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 440250 [Multi-domain]  Cd Length: 353  Bit Score: 40.04  E-value: 2.86e-03
                         10
                 ....*....|....*.
gi 124802227 257 VIAAMSGGIDSTVAAA 272
Cdd:COG0482    3 VVVGMSGGVDSSVAAA 18
mnmA PRK00143
tRNA-specific 2-thiouridylase MnmA; Reviewed
257-272 8.95e-03

tRNA-specific 2-thiouridylase MnmA; Reviewed


Pssm-ID: 234664 [Multi-domain]  Cd Length: 346  Bit Score: 38.51  E-value: 8.95e-03
                         10
                 ....*....|....*.
gi 124802227 257 VIAAMSGGIDSTVAAA 272
Cdd:PRK00143   3 VVVGMSGGVDSSVAAA 18
PRK05665 PRK05665
amidotransferase; Provisional
165-220 9.74e-03

amidotransferase; Provisional


Pssm-ID: 168162 [Multi-domain]  Cd Length: 240  Bit Score: 37.87  E-value: 9.74e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 124802227 165 TVWMNHNDEVTKIPENFYLVSSSENCLICSiYNKEYNIYGVQYHPEVYESLDGELM 220
Cdd:PRK05665 143 TLLISHQDQVTALPEGATVIASSDFCPFAA-YHIGDQVLCFQGHPEFVHDYSRALL 197
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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