NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|530378702|ref|XP_005248308|]
View 

catenin delta-2 isoform X1 [Homo sapiens]

Protein Classification

armadillo/beta-catenin-like repeat-containing protein( domain architecture ID 12192474)

armadillo/beta-catenin-like repeat-containing protein similar to catenin delta and plakophilin

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 581-621 2.11e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 51.28  E-value: 2.11e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 530378702    581 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVY 621
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 625-666 7.92e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 7.92e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 530378702    625 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 666
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELL-KSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 910-945 1.03e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 1.03e-07
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 530378702    910 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 945
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 834-875 1.65e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


:

Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.83  E-value: 1.65e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 530378702   834 PPKGIQMLWHPSIVKPYLTLLSeCSNPDTLEGAAGALQNLAA 875
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 999-1043 4.09e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 4.09e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 530378702    999 NMENAKALRDAGGIEKLVGISKSkgdkHSPKVVKAASQVLNSMWQ 1043
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKS----EDEEVVKEAAWALSNLSS 41
PLN03200 super family cl33659
cellulose synthase-interactive protein; Provisional
 550-723 6.02e-03

cellulose synthase-interactive protein; Provisional


The actual alignment was detected with superfamily member PLN03200:

Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 41.24  E-value: 6.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  550 PELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNK 629
Cdd:PLN03200  147 PSLWDQLQPGNKQDKVVEGLLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISK 226

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  630 IAlkNCGGIPALVRLLRKTTDLEIRELVTGVLWNLS--SCDALKMPIIQDALAVLTNAVIIPHSGWensplqddrkIQLH 707
Cdd:PLN03200  227 VL--DAGAVKQLLKLLGQGNEVSVRAEAAGALEALSsqSKEAKQAIADAGGIPALINATVAPSKEF----------MQGE 294

                         170
                  ....*....|....*..
gi 530378702  708 SSQVLR-NATGCLRNVS 723
Cdd:PLN03200  295 FAQALQeNAMGALANIC 311
 
Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 581-621 2.11e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 51.28  E-value: 2.11e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 530378702    581 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVY 621
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 625-666 7.92e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 7.92e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 530378702    625 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 666
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELL-KSEDEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 625-666 8.84e-08

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 49.38  E-value: 8.84e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 530378702   625 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 666
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 910-945 1.03e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 1.03e-07
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 530378702    910 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 945
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 581-620 8.76e-07

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 46.68  E-value: 8.76e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 530378702   581 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLV 620
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 834-875 1.65e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.83  E-value: 1.65e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 530378702   834 PPKGIQMLWHPSIVKPYLTLLSeCSNPDTLEGAAGALQNLAA 875
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 910-945 4.31e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 41.67  E-value: 4.31e-05
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 530378702   910 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 945
Cdd:pfam00514    5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 564-666 5.69e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 44.32  E-value: 5.69e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  564 PSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRmTEVHRSACGALRNLVYGKaNDDNKIALKNCGGIPALVR 643
Cdd:PLN03200  418 ADVQEELIRALSSLCCGKGGLWEALGGREGVQLLISLLGLS-SEQQQEYAVALLAILTDE-VDESKWAITAAGGIPPLVQ 495

                          90       100
                  ....*....|....*....|...
gi 530378702  644 LLrKTTDLEIRELVTGVLWNLSS 666
Cdd:PLN03200  496 LL-ETGSQKAKEDSATVLWNLCC 517
HEAT COG1413
HEAT repeat [General function prediction only];
548-664 1.30e-03

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 40.38  E-value: 1.30e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  548 RDPE-LPEVIQMLQHQFPSVQSNAAAYLqhlcfgdnkikAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNlvygkand 626
Cdd:COG1413    44 GDPRaVPALLEALKDPDPEVRAAAAEAL-----------GRIGDPEAVPALIAALKDEDPEVRRAAAEALGR-------- 104

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 530378702  627 dnkiaLKNCGGIPALVRLLrKTTDLEIRELVTGVLWNL 664
Cdd:COG1413   105 -----LGDPAAVPALLEAL-KDPDWEVRRAAARALGRL 136
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 999-1043 4.09e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 4.09e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 530378702    999 NMENAKALRDAGGIEKLVGISKSkgdkHSPKVVKAASQVLNSMWQ 1043
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKS----EDEEVVKEAAWALSNLSS 41
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 550-723 6.02e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 41.24  E-value: 6.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  550 PELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNK 629
Cdd:PLN03200  147 PSLWDQLQPGNKQDKVVEGLLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISK 226

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  630 IAlkNCGGIPALVRLLRKTTDLEIRELVTGVLWNLS--SCDALKMPIIQDALAVLTNAVIIPHSGWensplqddrkIQLH 707
Cdd:PLN03200  227 VL--DAGAVKQLLKLLGQGNEVSVRAEAAGALEALSsqSKEAKQAIADAGGIPALINATVAPSKEF----------MQGE 294

                         170
                  ....*....|....*..
gi 530378702  708 SSQVLR-NATGCLRNVS 723
Cdd:PLN03200  295 FAQALQeNAMGALANIC 311
HEAT COG1413
HEAT repeat [General function prediction only];
548-679 7.19e-03

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 38.07  E-value: 7.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  548 RDPE-LPEVIQMLQHQFPSVQSNAAAYLqhlcfgdnkikAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKAnd 626
Cdd:COG1413    13 GDPAaVPALIAALADEDPDVRAAAARAL-----------GRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEA-- 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 530378702  627 dnkialkncggIPALVRLLrKTTDLEIRELVTGVLWNLSSCDALkmPIIQDAL 679
Cdd:COG1413    80 -----------VPALIAAL-KDEDPEVRRAAAEALGRLGDPAAV--PALLEAL 118
 
Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 581-621 2.11e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 51.28  E-value: 2.11e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 530378702    581 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVY 621
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 625-666 7.92e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 7.92e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 530378702    625 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 666
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELL-KSEDEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 625-666 8.84e-08

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 49.38  E-value: 8.84e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 530378702   625 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 666
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 910-945 1.03e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 1.03e-07
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 530378702    910 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 945
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 581-620 8.76e-07

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 46.68  E-value: 8.76e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 530378702   581 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLV 620
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 834-875 1.65e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.83  E-value: 1.65e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 530378702   834 PPKGIQMLWHPSIVKPYLTLLSeCSNPDTLEGAAGALQNLAA 875
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 910-945 4.31e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 41.67  E-value: 4.31e-05
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 530378702   910 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 945
Cdd:pfam00514    5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 564-666 5.69e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 44.32  E-value: 5.69e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  564 PSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRmTEVHRSACGALRNLVYGKaNDDNKIALKNCGGIPALVR 643
Cdd:PLN03200  418 ADVQEELIRALSSLCCGKGGLWEALGGREGVQLLISLLGLS-SEQQQEYAVALLAILTDE-VDESKWAITAAGGIPPLVQ 495

                          90       100
                  ....*....|....*....|...
gi 530378702  644 LLrKTTDLEIRELVTGVLWNLSS 666
Cdd:PLN03200  496 LL-ETGSQKAKEDSATVLWNLCC 517
HEAT COG1413
HEAT repeat [General function prediction only];
548-664 1.30e-03

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 40.38  E-value: 1.30e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  548 RDPE-LPEVIQMLQHQFPSVQSNAAAYLqhlcfgdnkikAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNlvygkand 626
Cdd:COG1413    44 GDPRaVPALLEALKDPDPEVRAAAAEAL-----------GRIGDPEAVPALIAALKDEDPEVRRAAAEALGR-------- 104

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 530378702  627 dnkiaLKNCGGIPALVRLLrKTTDLEIRELVTGVLWNL 664
Cdd:COG1413   105 -----LGDPAAVPALLEAL-KDPDWEVRRAAARALGRL 136
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 999-1043 4.09e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 4.09e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 530378702    999 NMENAKALRDAGGIEKLVGISKSkgdkHSPKVVKAASQVLNSMWQ 1043
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKS----EDEEVVKEAAWALSNLSS 41
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 550-723 6.02e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 41.24  E-value: 6.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  550 PELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNK 629
Cdd:PLN03200  147 PSLWDQLQPGNKQDKVVEGLLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISK 226

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  630 IAlkNCGGIPALVRLLRKTTDLEIRELVTGVLWNLS--SCDALKMPIIQDALAVLTNAVIIPHSGWensplqddrkIQLH 707
Cdd:PLN03200  227 VL--DAGAVKQLLKLLGQGNEVSVRAEAAGALEALSsqSKEAKQAIADAGGIPALINATVAPSKEF----------MQGE 294

                         170
                  ....*....|....*..
gi 530378702  708 SSQVLR-NATGCLRNVS 723
Cdd:PLN03200  295 FAQALQeNAMGALANIC 311
HEAT COG1413
HEAT repeat [General function prediction only];
548-679 7.19e-03

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 38.07  E-value: 7.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530378702  548 RDPE-LPEVIQMLQHQFPSVQSNAAAYLqhlcfgdnkikAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKAnd 626
Cdd:COG1413    13 GDPAaVPALIAALADEDPDVRAAAARAL-----------GRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEA-- 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 530378702  627 dnkialkncggIPALVRLLrKTTDLEIRELVTGVLWNLSSCDALkmPIIQDAL 679
Cdd:COG1413    80 -----------VPALIAAL-KDEDPEVRRAAAEALGRLGDPAAV--PALLEAL 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH