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Conserved domains on  [gi|530394921|ref|XP_005252776|]
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tetraspanin-32 isoform X2 [Homo sapiens]

Protein Classification

Tetraspanin and PHEMX_like_LEL domain-containing protein( domain architecture ID 13626493)

Tetraspanin and PHEMX_like_LEL domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHEMX_like_LEL cd03153
Tetraspanin, extracellular domain or large extracellular loop (LEL), PHEMX_like family. ...
 148-230 3.92e-42

Tetraspanin, extracellular domain or large extracellular loop (LEL), PHEMX_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Phemx (pan hematopoietic expression) or TSSC6 may play a role in hematopoietic cell function.


:

Pssm-ID: 239406  Cd Length: 87  Bit Score: 142.28  E-value: 3.92e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530394921 148 LHSPTQVEDAMLDTYDLVYEQAMKGTSHVRRQELAAIQDVFLCCGKKSPFSRLGSTEADLCQGEEAARE----DCLQGIR 223
Cdd:cd03153    1 LHSPTQVEDAVLDTYDLVYEQALKSISGSVRQELAAIQDTFLCCGKKSPFGLLGSTGATLCQGGEAMREvamlLCLFLWF 80


                 ....*..
gi 530394921 224 SFLRTHQ 230
Cdd:cd03153   81 AILSGHG 87
Tetraspanin pfam00335
Tetraspanin family;
46-256 2.13e-09

Tetraspanin family;


:

Pssm-ID: 459767  Cd Length: 183  Bit Score: 56.56  E-value: 2.13e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530394921   46 KCQMLVTCFFILLLGLSVATmvtltyFGAHfavirrasLEKNPYQAVHQWAFSAGLSLVGLLTLGAVLSAA------ATV 119
Cdd:pfam00335   2 KYLLFLFNLLFWLLGLLLLG------VGVW--------LLSAFSLLLLGLSEASAYIPILLIVLGAVIFLVgflgccGAL 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530394921  120 REAQGLMAGGFLCFSLAFCAQVQVVFWRLHSPTQ--------VEDAMLDTYDLVYEQAMKGTSHVRRqelaaIQDVFLCC 191
Cdd:pfam00335  68 KENRCLLLTYFVLLLLLFLAELAAGILAFVYRDKlsgllsnwLKKSLEDGYRDWLDLYSCLNSALDS-----LQSEFGCC 142

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530394921  192 GkkspfsrlgsteadlcqgeeaareDCLQGIRSFLRTH-QQVASSLTSIGLaLTVSALLFSSFLWF 256
Cdd:pfam00335 143 G------------------------GCKEKLLEWLRKNlKIIGAGVIALGV-IQLLGIILACCLCC 183
 
Name Accession Description Interval E-value
PHEMX_like_LEL cd03153
Tetraspanin, extracellular domain or large extracellular loop (LEL), PHEMX_like family. ...
 148-230 3.92e-42

Tetraspanin, extracellular domain or large extracellular loop (LEL), PHEMX_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Phemx (pan hematopoietic expression) or TSSC6 may play a role in hematopoietic cell function.


Pssm-ID: 239406  Cd Length: 87  Bit Score: 142.28  E-value: 3.92e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530394921 148 LHSPTQVEDAMLDTYDLVYEQAMKGTSHVRRQELAAIQDVFLCCGKKSPFSRLGSTEADLCQGEEAARE----DCLQGIR 223
Cdd:cd03153    1 LHSPTQVEDAVLDTYDLVYEQALKSISGSVRQELAAIQDTFLCCGKKSPFGLLGSTGATLCQGGEAMREvamlLCLFLWF 80


                 ....*..
gi 530394921 224 SFLRTHQ 230
Cdd:cd03153   81 AILSGHG 87
Tetraspanin pfam00335
Tetraspanin family;
46-256 2.13e-09

Tetraspanin family;


Pssm-ID: 459767  Cd Length: 183  Bit Score: 56.56  E-value: 2.13e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530394921   46 KCQMLVTCFFILLLGLSVATmvtltyFGAHfavirrasLEKNPYQAVHQWAFSAGLSLVGLLTLGAVLSAA------ATV 119
Cdd:pfam00335   2 KYLLFLFNLLFWLLGLLLLG------VGVW--------LLSAFSLLLLGLSEASAYIPILLIVLGAVIFLVgflgccGAL 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530394921  120 REAQGLMAGGFLCFSLAFCAQVQVVFWRLHSPTQ--------VEDAMLDTYDLVYEQAMKGTSHVRRqelaaIQDVFLCC 191
Cdd:pfam00335  68 KENRCLLLTYFVLLLLLFLAELAAGILAFVYRDKlsgllsnwLKKSLEDGYRDWLDLYSCLNSALDS-----LQSEFGCC 142

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530394921  192 GkkspfsrlgsteadlcqgeeaareDCLQGIRSFLRTH-QQVASSLTSIGLaLTVSALLFSSFLWF 256
Cdd:pfam00335 143 G------------------------GCKEKLLEWLRKNlKIIGAGVIALGV-IQLLGIILACCLCC 183
 
Name Accession Description Interval E-value
PHEMX_like_LEL cd03153
Tetraspanin, extracellular domain or large extracellular loop (LEL), PHEMX_like family. ...
 148-230 3.92e-42

Tetraspanin, extracellular domain or large extracellular loop (LEL), PHEMX_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Phemx (pan hematopoietic expression) or TSSC6 may play a role in hematopoietic cell function.


Pssm-ID: 239406  Cd Length: 87  Bit Score: 142.28  E-value: 3.92e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530394921 148 LHSPTQVEDAMLDTYDLVYEQAMKGTSHVRRQELAAIQDVFLCCGKKSPFSRLGSTEADLCQGEEAARE----DCLQGIR 223
Cdd:cd03153    1 LHSPTQVEDAVLDTYDLVYEQALKSISGSVRQELAAIQDTFLCCGKKSPFGLLGSTGATLCQGGEAMREvamlLCLFLWF 80


                 ....*..
gi 530394921 224 SFLRTHQ 230
Cdd:cd03153   81 AILSGHG 87
Tetraspanin pfam00335
Tetraspanin family;
46-256 2.13e-09

Tetraspanin family;


Pssm-ID: 459767  Cd Length: 183  Bit Score: 56.56  E-value: 2.13e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530394921   46 KCQMLVTCFFILLLGLSVATmvtltyFGAHfavirrasLEKNPYQAVHQWAFSAGLSLVGLLTLGAVLSAA------ATV 119
Cdd:pfam00335   2 KYLLFLFNLLFWLLGLLLLG------VGVW--------LLSAFSLLLLGLSEASAYIPILLIVLGAVIFLVgflgccGAL 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530394921  120 REAQGLMAGGFLCFSLAFCAQVQVVFWRLHSPTQ--------VEDAMLDTYDLVYEQAMKGTSHVRRqelaaIQDVFLCC 191
Cdd:pfam00335  68 KENRCLLLTYFVLLLLLFLAELAAGILAFVYRDKlsgllsnwLKKSLEDGYRDWLDLYSCLNSALDS-----LQSEFGCC 142

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530394921  192 GkkspfsrlgsteadlcqgeeaareDCLQGIRSFLRTH-QQVASSLTSIGLaLTVSALLFSSFLWF 256
Cdd:pfam00335 143 G------------------------GCKEKLLEWLRKNlKIIGAGVIALGV-IQLLGIILACCLCC 183
tetraspanin_LEL cd03127
Tetraspanin, extracellular domain or large extracellular loop (LEL). Tetraspanins are ...
 152-229 1.30e-03

Tetraspanin, extracellular domain or large extracellular loop (LEL). Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. The tetraspanin family contains CD9, CD63, CD37, CD53, CD82, CD151, and CD81, amongst others. Tetraspanins are involved in diverse processes such as cell activation and proliferation, adhesion and motility, differentiation, cancer, and others. Their various functions may relate to their ability to act as molecular facilitators, grouping specific cell-surface proteins and affecting formation and stability of signaling complexes. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web", which may also include integrins.


Pssm-ID: 239401 [Multi-domain]  Cd Length: 90  Bit Score: 37.48  E-value: 1.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530394921 152 TQVEDAMLDTYDLVYEQamKGTSHVRRQELAAIQDVFLCCGKKSP--FSRLGST-------EADLCQGEEAAREDCLQGI 222
Cdd:cd03127    5 DQLESLVSDTLNDAWDE--YYVDDDFQEAMDALQSTFECCGVNGPtdYLDLRLLvpsscckGTDGNCGLNLYTEGCLEKL 82


                 ....*..
gi 530394921 223 RSFLRTH 229
Cdd:cd03127   83 VDFLRSN 89
CD81_like_LEL cd03151
Tetraspanin, extracellular domain or large extracellular loop (LEL), CD81_like subfamily. ...
 153-226 6.58e-03

Tetraspanin, extracellular domain or large extracellular loop (LEL), CD81_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD81, also referred to as Target for anti-proliferative antigen-1, TAPA-1, is found in virtually all tissues, may be involved in regulation of cell growth and has been described as a member of the CD19/CD21/Leu-13 signal transduction complex identified on B cells (the B-Cell co-receptor).


Pssm-ID: 239404  Cd Length: 84  Bit Score: 35.47  E-value: 6.58e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 530394921 153 QVEDAMLDTYDLVYEQAMKGTSHVRRQELAAIQDVFLCCGKKSPFSRLGSTEADLC-QGEEAAREDCLQGIRSFL 226
Cdd:cd03151    6 QIIKEVQNFYDSAYQDAVTDTRSKGTAVLKTFHSTLDCCGKGNLTALLSLLSTDLCpKKLLLDTKDCHQEIDDLF 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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