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Conserved domains on  [gi|530396766|ref|XP_005274044|]
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pecanex-like protein 3 isoform X2 [Homo sapiens]

Protein Classification

oligosaccharide repeat unit polymerase; pecanex family protein( domain architecture ID 10523572)

oligosaccharide repeat unit polymerase may act to polymerize the oligosaccharide repeat units of surface polysaccharides, including O-antigen in Gram-negative bacteria and capsular polysaccharide in Gram-positive bacteria; pecanex family protein similar to Drosophila melanogaster protein pecanex that is involved in neurogenesis

Gene Ontology:  GO:0016020

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Pecanex_C pfam05041
Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein ...
 1582-1808 2.34e-138

Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein homologs. The pecanex protein is a maternal-effect neurogenic gene found in Drosophila.


:

Pssm-ID: 461533  Cd Length: 227  Bit Score: 429.82  E-value: 2.34e-138
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  1582 DQDWNSPLVTLCFGLCVLGRRALGTASHSMSASLEPFLYGLHALFKGDFRITSPRDEWVFADMDLLHRVVAPGVRMALKL 1661
Cdd:pfam05041    1 DSDSDSTLVTLCFALSLLGRRALGSASHSMSNSLESFLYGLHFLFKGDFRITSDKDEWVFMDLDLLRKVVAPAMRMALKL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  1662 HQDHFTSPDEYEEPAALYDAIAANEERLVISHEGDPAWRSAILSNTPSLLALRHVLDDASDEYKIIMLNRRHLSFRVIKV 1741
Cdd:pfam05041   81 HQDHFTDPDEYDENEVLYDAIHTYELVIVIEHESDPRWRVAVLSNNPSLLALRHVDDDGEDEYKIIMLNRRTLSFRVIKV 160

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 530396766  1742 NRECVRGLWAGQQQELVFLRNRNPERGSIQNAKQALRNMINSSCDQPLGYPIYVSPLTTSLAGSHPQ 1808
Cdd:pfam05041  161 NRECVRGLWAGQQQELIFLRNRNRERGSIQNAKQALRNIINSSCDQPIGYPIYVSPLTTSYSNTHLQ 227
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 194-628 2.16e-07

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.49  E-value: 2.16e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQR 273
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR 2685

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  274 RGA----GGYQPLDRRGSGEPTPQKAGSSDScfSGTDRETLSSFKSEKTNSTHLD----SPPGGPAPEGSDTDPPSEAeL 345
Cdd:PHA03247 2686 RAArptvGSLTSLADPPPPPPTPEPAPHALV--SATPLPPGPAAARQASPALPAApappAVPAGPATPGGPARPARPP-T 2762

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  346 PASPDAGVPSDDTlrsfdtvigAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPPGRAPRRPllegggffedEDTS 425
Cdd:PHA03247 2763 TAGPPAPAPPAAP---------AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALP----------PAAS 2823

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  426 EGSELSPASSlrSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHARVLS 505
Cdd:PHA03247 2824 PAGPLPPPTS--AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALP 2901

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  506 MDGAGgdvlRPPLAGCKAELEAQVGVEQAASEPVVLPAEAR-RGPAANQPGWRGELQEEGAVggaaeeTGRRDRSSSVRR 584
Cdd:PHA03247 2902 PDQPE----RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRpQPPLAPTTDPAGAGEPSGAV------PQPWLGALVPGR 2971

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 530396766  585 TQAIRRR--HNAGSNPTPPAsvmgSPPSLQEAQRGRAASHSRALTL 628
Cdd:PHA03247 2972 VAVPRFRvpQPAPSREAPAS----STPPLTGHSLSRVSSWASSLAL 3013
 
Name Accession Description Interval E-value
Pecanex_C pfam05041
Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein ...
 1582-1808 2.34e-138

Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein homologs. The pecanex protein is a maternal-effect neurogenic gene found in Drosophila.


Pssm-ID: 461533  Cd Length: 227  Bit Score: 429.82  E-value: 2.34e-138
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  1582 DQDWNSPLVTLCFGLCVLGRRALGTASHSMSASLEPFLYGLHALFKGDFRITSPRDEWVFADMDLLHRVVAPGVRMALKL 1661
Cdd:pfam05041    1 DSDSDSTLVTLCFALSLLGRRALGSASHSMSNSLESFLYGLHFLFKGDFRITSDKDEWVFMDLDLLRKVVAPAMRMALKL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  1662 HQDHFTSPDEYEEPAALYDAIAANEERLVISHEGDPAWRSAILSNTPSLLALRHVLDDASDEYKIIMLNRRHLSFRVIKV 1741
Cdd:pfam05041   81 HQDHFTDPDEYDENEVLYDAIHTYELVIVIEHESDPRWRVAVLSNNPSLLALRHVDDDGEDEYKIIMLNRRTLSFRVIKV 160

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 530396766  1742 NRECVRGLWAGQQQELVFLRNRNPERGSIQNAKQALRNMINSSCDQPLGYPIYVSPLTTSLAGSHPQ 1808
Cdd:pfam05041  161 NRECVRGLWAGQQQELIFLRNRNRERGSIQNAKQALRNIINSSCDQPIGYPIYVSPLTTSYSNTHLQ 227
PHA03247 PHA03247
large tegument protein UL36; Provisional
 194-628 2.16e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.49  E-value: 2.16e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQR 273
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR 2685

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  274 RGA----GGYQPLDRRGSGEPTPQKAGSSDScfSGTDRETLSSFKSEKTNSTHLD----SPPGGPAPEGSDTDPPSEAeL 345
Cdd:PHA03247 2686 RAArptvGSLTSLADPPPPPPTPEPAPHALV--SATPLPPGPAAARQASPALPAApappAVPAGPATPGGPARPARPP-T 2762

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  346 PASPDAGVPSDDTlrsfdtvigAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPPGRAPRRPllegggffedEDTS 425
Cdd:PHA03247 2763 TAGPPAPAPPAAP---------AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALP----------PAAS 2823

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  426 EGSELSPASSlrSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHARVLS 505
Cdd:PHA03247 2824 PAGPLPPPTS--AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALP 2901

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  506 MDGAGgdvlRPPLAGCKAELEAQVGVEQAASEPVVLPAEAR-RGPAANQPGWRGELQEEGAVggaaeeTGRRDRSSSVRR 584
Cdd:PHA03247 2902 PDQPE----RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRpQPPLAPTTDPAGAGEPSGAV------PQPWLGALVPGR 2971

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 530396766  585 TQAIRRR--HNAGSNPTPPAsvmgSPPSLQEAQRGRAASHSRALTL 628
Cdd:PHA03247 2972 VAVPRFRvpQPAPSREAPAS----STPPLTGHSLSRVSSWASSLAL 3013
 
Name Accession Description Interval E-value
Pecanex_C pfam05041
Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein ...
 1582-1808 2.34e-138

Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein homologs. The pecanex protein is a maternal-effect neurogenic gene found in Drosophila.


Pssm-ID: 461533  Cd Length: 227  Bit Score: 429.82  E-value: 2.34e-138
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  1582 DQDWNSPLVTLCFGLCVLGRRALGTASHSMSASLEPFLYGLHALFKGDFRITSPRDEWVFADMDLLHRVVAPGVRMALKL 1661
Cdd:pfam05041    1 DSDSDSTLVTLCFALSLLGRRALGSASHSMSNSLESFLYGLHFLFKGDFRITSDKDEWVFMDLDLLRKVVAPAMRMALKL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  1662 HQDHFTSPDEYEEPAALYDAIAANEERLVISHEGDPAWRSAILSNTPSLLALRHVLDDASDEYKIIMLNRRHLSFRVIKV 1741
Cdd:pfam05041   81 HQDHFTDPDEYDENEVLYDAIHTYELVIVIEHESDPRWRVAVLSNNPSLLALRHVDDDGEDEYKIIMLNRRTLSFRVIKV 160

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 530396766  1742 NRECVRGLWAGQQQELVFLRNRNPERGSIQNAKQALRNMINSSCDQPLGYPIYVSPLTTSLAGSHPQ 1808
Cdd:pfam05041  161 NRECVRGLWAGQQQELIFLRNRNRERGSIQNAKQALRNIINSSCDQPIGYPIYVSPLTTSYSNTHLQ 227
PHA03247 PHA03247
large tegument protein UL36; Provisional
 194-628 2.16e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.49  E-value: 2.16e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQR 273
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR 2685

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  274 RGA----GGYQPLDRRGSGEPTPQKAGSSDScfSGTDRETLSSFKSEKTNSTHLD----SPPGGPAPEGSDTDPPSEAeL 345
Cdd:PHA03247 2686 RAArptvGSLTSLADPPPPPPTPEPAPHALV--SATPLPPGPAAARQASPALPAApappAVPAGPATPGGPARPARPP-T 2762

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  346 PASPDAGVPSDDTlrsfdtvigAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPPGRAPRRPllegggffedEDTS 425
Cdd:PHA03247 2763 TAGPPAPAPPAAP---------AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALP----------PAAS 2823

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  426 EGSELSPASSlrSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHARVLS 505
Cdd:PHA03247 2824 PAGPLPPPTS--AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALP 2901

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  506 MDGAGgdvlRPPLAGCKAELEAQVGVEQAASEPVVLPAEAR-RGPAANQPGWRGELQEEGAVggaaeeTGRRDRSSSVRR 584
Cdd:PHA03247 2902 PDQPE----RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRpQPPLAPTTDPAGAGEPSGAV------PQPWLGALVPGR 2971

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 530396766  585 TQAIRRR--HNAGSNPTPPAsvmgSPPSLQEAQRGRAASHSRALTL 628
Cdd:PHA03247 2972 VAVPRFRvpQPAPSREAPAS----STPPLTGHSLSRVSSWASSLAL 3013
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 197-510 6.37e-06

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 51.71  E-value: 6.37e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  197 PQTPPGAVPDPSLAStDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQRRGA 276
Cdd:PHA03307  118 PPTPPPASPPPSPAP-DLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPS 196

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  277 GGYQPLDRRGSGEPTPQKAGSSDSCFSGtDRETLSSFKSEKTNSTHLDSPPGGPAPEGSDTDP-PSEAELPASPDAGVPS 355
Cdd:PHA03307  197 TPPAAASPRPPRRSSPISASASSPAPAP-GRSAADDAGASSSDSSSSESSGCGWGPENECPLPrPAPITLPTRIWEASGW 275

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  356 DDTLRSFDTVIGAGTPPGlaepllvvrpkdlallrPSKRQPPLRRHSPPGRAPRRPLLEGGGffedeDTSEGSELSPASS 435
Cdd:PHA03307  276 NGPSSRPGPASSSSSPRE-----------------RSPSPSPSSPGSGPAPSSPRASSSSSS-----SRESSSSSTSSSS 333

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 530396766  436 LRSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEG--TAVPPKRPygtqrTPSTASAKTHARVLSMDGAG 510
Cdd:PHA03307  334 ESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPssPAASAGRP-----TRRRARAAVAGRARRRDATG 405
PHA03247 PHA03247
large tegument protein UL36; Provisional
 200-614 2.01e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.94  E-value: 2.01e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  200 PPGAvPDPSLASTDSSEPSP-LAGDGAPWSGSSMADTPMspLLKGSLSQELSKSFLTltqpdralvrtssrREQRRGAGG 278
Cdd:PHA03247 2417 PPGP-PDVRFVGSEEIEELPfVSPGGDVLAGLAADGDPF--FARTILGAPFSLSLLL--------------GELFPGAPV 2479

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  279 YQ-PLDRRGSGEPTPqkagSSDSCFSGTDRETLSSFKSEKTNSTHLDSPPGGPAP-----------------EGSDTDPP 340
Cdd:PHA03247 2480 YRrPAEARFPFAAGA----APDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHprmltwirgleelasddAGDPPPPL 2555

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  341 SEAELPASPDAGVP-SDDTLRSFDTVIGA-----GTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSP----PGRAPRR 410
Cdd:PHA03247 2556 PPAAPPAAPDRSVPpPRPAPRPSEPAVTSrarrpDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPdpppPSPSPAA 2635

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  411 PLLEGGGFFEDEDTSEGSELSPASSLRSQRRYSTDSSSSTSCYSPESSRgaaggPRKRRAPHGAEEGTAVPPKRPYGTQR 490
Cdd:PHA03247 2636 NEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPR-----RRAARPTVGSLTSLADPPPPPPTPEP 2710

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  491 TPSTASAKTHARVLSMDGAGGDVLRP--PLAGCKAELEAQVGVEQAASEPVVLPAEARRGPAANQPGWRGELQEEGAVGG 568
Cdd:PHA03247 2711 APHALVSATPLPPGPAAARQASPALPaaPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVAS 2790

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 530396766  569 AAEETGRRDRSSSVRRTQAIRRRHNAGSNPTP-PASVMGSPPSLQEA 614
Cdd:PHA03247 2791 LSESRESLPSPWDPADPPAAVLAPAAALPPAAsPAGPLPPPTSAQPT 2837
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 286-631 2.78e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 49.40  E-value: 2.78e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  286 GSGEPTPQKAGSSDSCFSGTDRETLS---SFKSEKTNSTHLDSPPGGPAPEGSDTDPPSE-AELPASPDAGVPSDDTLRS 361
Cdd:PHA03307   74 GPGTEAPANESRSTPTWSLSTLAPASparEGSPTPPGPSSPDPPPPTPPPASPPPSPAPDlSEMLRPVGSPGPPPAASPP 153

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  362 FDTVIGAGTPPGLAEPLLVVRPkdLALLRPSKRQPPLRRHSPPGRAPRrPLLEGGGFFEDEDTSEGSELSPASSLRSQRR 441
Cdd:PHA03307  154 AAGASPAAVASDAASSRQAALP--LSSPEETARAPSSPPAEPPPSTPP-AAASPRPPRRSSPISASASSPAPAPGRSAAD 230

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  442 YSTDSSSSTSCYSP----ESSRGAAGGPRKRRAPHGAEEGTAVPPKRP---YGTQRTPSTASAKTHARVLSMDGAGGDVL 514
Cdd:PHA03307  231 DAGASSSDSSSSESsgcgWGPENECPLPRPAPITLPTRIWEASGWNGPssrPGPASSSSSPRERSPSPSPSSPGSGPAPS 310

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  515 RPPLAGckaeleaqvgvEQAASEPVVLPAEARRGPAANQPgwrgelqeegAVGGAAEEtgrrdrsssvrrtqairrrHNA 594
Cdd:PHA03307  311 SPRASS-----------SSSSSRESSSSSTSSSSESSRGA----------AVSPGPSP-------------------SRS 350

                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 530396766  595 GSNPTPPASVMGSPPSlqEAQRGRAASHSRALTLPSA 631
Cdd:PHA03307  351 PSPSRPPPPADPSSPR--KRPRPSRAPSSPAASAGRP 385
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 197-502 3.41e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 49.40  E-value: 3.41e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  197 PQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKsfLTLTQPDRALVRTSSRREQRRGA 276
Cdd:PHA03307   72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASP--PPSPAPDLSEMLRPVGSPGPPPA 149

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  277 GGYQPLDRRGSGEPTPQKAGSSDSCFSGTDRETLSSfKSEKTNSTHLDSPPGGPAPEGSDTDPPSEAELPASPDAGVPSD 356
Cdd:PHA03307  150 ASPPAAGASPAAVASDAASSRQAALPLSSPEETARA-PSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSA 228

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  357 DTLRSFDTVIGAGTP-PGLAEPLLVVRPKDLALLRPSKRQPplRRHSPPGRAPRRPLLEGGGFFEDEDTSEGSELSPASS 435
Cdd:PHA03307  229 ADDAGASSSDSSSSEsSGCGWGPENECPLPRPAPITLPTRI--WEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSG 306

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 530396766  436 LRSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHAR 502
Cdd:PHA03307  307 PAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSR 373
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 197-438 7.21e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 48.24  E-value: 7.21e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  197 PQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSqelsksfltltqpdralvrtSSRREQRRGA 276
Cdd:PHA03307  189 PPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSD--------------------SSSSESSGCG 248

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  277 GGyqPLDRRGSGEPTPQKA-GSSDSCFSGTDRETLSSFKSEKTNSTHLDSPPGGPAPEGSDTDPPSEAELPASPDAGVPS 355
Cdd:PHA03307  249 WG--PENECPLPRPAPITLpTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSS 326

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  356 DDTLRSFDTVIGAGTPPG--LAEPLLVVRPKD-LALLRPSKRQPPLRRHSPPGRAPRRPLLEGGGFFEDED--TSEGSEL 430
Cdd:PHA03307  327 SSTSSSSESSRGAAVSPGpsPSRSPSPSRPPPpADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRarRRDATGR 406


                  ....*...
gi 530396766  431 SPASSLRS 438
Cdd:PHA03307  407 FPAGRPRP 414
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 194-608 3.10e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 45.93  E-value: 3.10e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRT--SSRRE 271
Cdd:PHA03307   17 GGEFFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTwsLSTLA 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  272 QRRGAGGYQPLDRRGSGEPTPQKAGSSDSCFSGTDRETLSSFKSEKTnsthLDSPPGGPAPEGSDTDPPSEAELPASPDA 351
Cdd:PHA03307   97 PASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGS----PGPPPAASPPAAGASPAAVASDAASSRQA 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  352 GVPSDDTLRSFDTVIGAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPP--GRAPRRPLLEGGGFFEDEDTSEGSE 429
Cdd:PHA03307  173 ALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGrsAADDAGASSSDSSSSESSGCGWGPE 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  430 ------LSPASSLRSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQ-RTPSTASAKTHAR 502
Cdd:PHA03307  253 necplpRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSsSSRESSSSSTSSS 332

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530396766  503 VLSMDGAGGDVLRPPlagckaeleAQVGVEQAASEPVVLPAEARRGPAANQPGW------RGELQEEG-AVGGAA---EE 572
Cdd:PHA03307  333 SESSRGAAVSPGPSP---------SRSPSPSRPPPPADPSSPRKRPRPSRAPSSpaasagRPTRRRARaAVAGRArrrDA 403

                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 530396766  573 TGRRDRSSSVRRTQAIRRRHNAGSNPTPPASVMGSP 608
Cdd:PHA03307  404 TGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSGEP 439
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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