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Conserved domains on  [gi|564342546|ref|XP_006234890|]
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microtubule-associated protein 1A isoform X3 [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PTZ00121 super family cl31754
MAEBL; Provisional
1370-1607 6.67e-11

MAEBL; Provisional


The actual alignment was detected with superfamily member PTZ00121:

Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 68.63  E-value: 6.67e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1370 RQQDKTPEQKGRDLDEKDTAAELDKGPEPKEKDLDREDQGQRAGPPAEKdKASEQRDTDLQQTQATEPRDRAQE-RRDSE 1448
Cdd:PTZ00121 1261 RMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKK-KAEEAKKADEAKKKAEEAKKKADAaKKKAE 1339
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1449 EKDKSLELRDRTPEEK-DRILVQEDRApehsipeptqtdRAPDRKGTDDKEQKEEASEEKEQVleqkdwalgKEGETLDQ 1527
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAaDEAEAAEEKA------------EAAEKKKEEAKKKADAAKKKAEEK---------KKADEAKK 1398
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1528 EARTAEQKDETLKEDKTQGQKSSFVEDKTTTSKETVLDQKSAEKADSVEQQDGAALEKTRALGLEESPAEGSKAREQEKK 1607
Cdd:PTZ00121 1399 KAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKK 1478
PTZ00121 super family cl31754
MAEBL; Provisional
311-760 5.53e-09

MAEBL; Provisional


The actual alignment was detected with superfamily member PTZ00121:

Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 62.47  E-value: 5.53e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  311 SKIKHRADSKESLKAAPKTAVSKLAKREEVLEEGAKEARSELAKELAKTEKKAKEPSEKPPEKPSKSERVRGESSEALKA 390
Cdd:PTZ00121 1341 AKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKA 1420
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  391 EK-RRLIKDKAGKKHLKEKISKLEEKKDKEKKEIKKERKELKKEEGRKEEKKDAKKDEKRKDTKPEVKKLSKPDLKPFTP 469
Cdd:PTZ00121 1421 DEaKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKAD 1500
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  470 EVRKtlykaKAPGRVKVDKGRAARGEKELSSEPRTPPAQKGAAPPAAVSGHRELALSSPEDLTQDfEELKREERGLLAEQ 549
Cdd:PTZ00121 1501 EAKK-----AAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKA-EEKKKAEEAKKAEE 1574
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  550 RDTGLGEKPLPADATEQGHPSAAIQVTQPSGPV------------LEGEHVEREKEVVPDSPGDKGSTNRGPDSGAEVEK 617
Cdd:PTZ00121 1575 DKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMkaeeakkaeeakIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKK 1654
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  618 EKETWEERKQREAElgpentaaREESEAEVKEDVIEKAELEEMEETHPSDEEGEETKAESFYQKHTQEALKASPKSREAL 697
Cdd:PTZ00121 1655 AEEENKIKAAEEAK--------KAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEE 1726
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564342546  698 GGRDLGFQGKAPEKETASFLSSLATPAGATEHVSYIQDETIPGYSETEQTISD--EEIHDEPDER 760
Cdd:PTZ00121 1727 ENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAviEEELDEEDEK 1791
PHA03247 super family cl33720
large tegument protein UL36; Provisional
1986-2445 9.03e-09

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 61.49  E-value: 9.03e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1986 PASPQNLQSDTPAFSYASLAGPAVPPRQEPDPGPNVEPSITPPAVPPRAPISL--------------------SKDLSPP 2045
Cdd:PHA03247 2475 PGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEpvhprmltwirgleelasddAGDPPPP 2554
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2046 LNGSTVSCSPDRRTPSPK---------------------ETGRGHWDDGTNDSDLEKGAREQPEKETRSPSPHHPMPMGH 2104
Cdd:PHA03247 2555 LPPAAPPAAPDRSVPPPRpaprpsepavtsrarrpdappQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPA 2634
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2105 SSLWPETEAYSSLSSDSHLGSVRP---SLDFPASAFGFSSLQPAPPQLPSPAEPRsAPCGSLAFSGD----------RAL 2171
Cdd:PHA03247 2635 ANEPDPHPPPTVPPPERPRDDPAPgrvSRPRRARRLGRAAQASSPPQRPRRRAAR-PTVGSLTSLADpppppptpepAPH 2713
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2172 ALVPGTPTRTRHDEYLEVTKAPSLDSSLPQLPS-PSSPGGPllsnlPRPASPALSEG--SSSEATTPVISSVAERFPPGL 2248
Cdd:PHA03247 2714 ALVSATPLPPGPAAARQASPALPAAPAPPAVPAgPATPGGP-----ARPARPPTTAGppAPAPPAAPAAGPPRRLTRPAV 2788
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2249 EAAEQSAEGLGSGKESAAHSLWDLTPLSPAPSASLDLAPAPAPAPAPAPAPGLPGDLGDGTLPCRPECT--GELTKKPSP 2326
Cdd:PHA03247 2789 ASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVApgGDVRRRPPS 2868
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2327 FLSPSGDHEANGPGETSLNPPGfvTATAEKEEAEAPHAWERGSWPEGAERSSRPDTLLSSEQPLRPGKSSGGPPCSLSSE 2406
Cdd:PHA03247 2869 RSPAAKPAAPARPPVRRLARPA--VSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPT 2946
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*..
gi 564342546 2407 VEAGPQGCAT--DPRPHCGELSPS------FLNPPLPPSTDDSDLST 2445
Cdd:PHA03247 2947 TDPAGAGEPSgaVPQPWLGALVPGrvavprFRVPQPAPSREAPASST 2993
PHA03307 super family cl33723
transcriptional regulator ICP4; Provisional
1743-2112 5.41e-06

transcriptional regulator ICP4; Provisional


The actual alignment was detected with superfamily member PHA03307:

Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 52.48  E-value: 5.41e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1743 PVGLPPEEEDKLTRSPFEIISPPASPPEMTGQRVPSAPGQESPVPDTESTAPMRNEPTTPSWLAEIPPWVPKDRPLPPAP 1822
Cdd:PHA03307   72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAAS 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1823 LSPAPAPPTPAPEPHTPVP-FSWGLAEYDSVVAAVQEGAAELEGGPYSPLGKDY---RKAEGEREGEGGAGAPDSSSFSP 1898
Cdd:PHA03307  152 PPAAGASPAAVASDAASSRqAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRpprRSSPISASASSPAPAPGRSAADD 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1899 KVPEAGESLATRDTEQTEPEQREPTPYPDERSFQYADIYEQMMLTGLGPACPTREPPLGASGDWPPHLSTKEEAAGCNTS 1978
Cdd:PHA03307  232 AGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSS 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1979 AEKeTSSPASPQNLQSDTPAFSYASLAGPAVPPRQEPDPGPNvePSITPPAVPPRAPISLSKDLSPPLNGSTVSCSPDRR 2058
Cdd:PHA03307  312 PRA-SSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPS--PSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRR 388
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 564342546 2059 TPSPKETGRGHWDDGTNDSDLEKGAREQPEKETRSPSPHHPMPMGHSS--LWPETE 2112
Cdd:PHA03307  389 RARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSgePWPGSP 444
ComEC super family cl28169
DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily ...
46-149 4.96e-04

DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily [Intracellular trafficking, secretion, and vesicular transport];


The actual alignment was detected with superfamily member COG2333:

Pssm-ID: 441904 [Multi-domain]  Cd Length: 253  Bit Score: 44.46  E-value: 4.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546   46 GRGDSALF-AVNGFNILVDGGSDRKSCFWKLV-------RHLDRIDSVLLTHIGADNLPGINGLLQR-KVAELEE-EQSQ 115
Cdd:COG2333     9 GQGDAILIrTPDGKTILIDTGPRPSFDAGERVvlpylraLGIRRLDLLVLTHPDADHIGGLAAVLEAfPVGRVLVsGPPD 88
                          90       100       110
                  ....*....|....*....|....*....|....
gi 564342546  116 GSSSYSDWVKNLISPELGVVFFNVPDKLRLPDAS 149
Cdd:COG2333    89 TSETYERLLEALKEKGIPVRPCRAGDTWQLGGVR 122
PHA03247 super family cl33720
large tegument protein UL36; Provisional
2296-2624 5.82e-03

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.62  E-value: 5.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2296 APAPGLPGDLGDGTLPCRPECTGELTKKPSPFLSPSGDHEANGPGETSLNPPgfvtataekEEAEAPHAWERGSWPEGAE 2375
Cdd:PHA03247 2598 PRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPP---------ERPRDDPAPGRVSRPRRAR 2668
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2376 RSSRPDTllSSEQPLRPGKSSGGPPC-SLSSEVEAGPQGCATDPRPHcgelsPSFLNPPLPPSTDDSDLSTEEARLAgkg 2454
Cdd:PHA03247 2669 RLGRAAQ--ASSPPQRPRRRAARPTVgSLTSLADPPPPPPTPEPAPH-----ALVSATPLPPGPAAARQASPALPAA--- 2738
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2455 grrRVGRPGATGGPCPMADETPPTSASDSGSSQSDSDVPPETEECPSITAEAALDSDEDGDFLPV--DKAGGVSGTHHPR 2532
Cdd:PHA03247 2739 ---PAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSpwDPADPPAAVLAPA 2815
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2533 PGHDPPPTPLPDPRPSPPRPDVCMADPEGLSSESGRVERLREKGRP-GRRAPGRAKPASPARRLDIRGKRSPTPgkgPVD 2611
Cdd:PHA03247 2816 AALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvRRRPPSRSPAAKPAAPARPPVRRLARP---AVS 2892
                         330
                  ....*....|...
gi 564342546 2612 RTSRTVPRPRSTP 2624
Cdd:PHA03247 2893 RSTESFALPPDQP 2905
 
Name Accession Description Interval E-value
PTZ00121 PTZ00121
MAEBL; Provisional
1370-1607 6.67e-11

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 68.63  E-value: 6.67e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1370 RQQDKTPEQKGRDLDEKDTAAELDKGPEPKEKDLDREDQGQRAGPPAEKdKASEQRDTDLQQTQATEPRDRAQE-RRDSE 1448
Cdd:PTZ00121 1261 RMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKK-KAEEAKKADEAKKKAEEAKKKADAaKKKAE 1339
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1449 EKDKSLELRDRTPEEK-DRILVQEDRApehsipeptqtdRAPDRKGTDDKEQKEEASEEKEQVleqkdwalgKEGETLDQ 1527
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAaDEAEAAEEKA------------EAAEKKKEEAKKKADAAKKKAEEK---------KKADEAKK 1398
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1528 EARTAEQKDETLKEDKTQGQKSSFVEDKTTTSKETVLDQKSAEKADSVEQQDGAALEKTRALGLEESPAEGSKAREQEKK 1607
Cdd:PTZ00121 1399 KAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKK 1478
PTZ00121 PTZ00121
MAEBL; Provisional
311-760 5.53e-09

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 62.47  E-value: 5.53e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  311 SKIKHRADSKESLKAAPKTAVSKLAKREEVLEEGAKEARSELAKELAKTEKKAKEPSEKPPEKPSKSERVRGESSEALKA 390
Cdd:PTZ00121 1341 AKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKA 1420
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  391 EK-RRLIKDKAGKKHLKEKISKLEEKKDKEKKEIKKERKELKKEEGRKEEKKDAKKDEKRKDTKPEVKKLSKPDLKPFTP 469
Cdd:PTZ00121 1421 DEaKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKAD 1500
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  470 EVRKtlykaKAPGRVKVDKGRAARGEKELSSEPRTPPAQKGAAPPAAVSGHRELALSSPEDLTQDfEELKREERGLLAEQ 549
Cdd:PTZ00121 1501 EAKK-----AAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKA-EEKKKAEEAKKAEE 1574
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  550 RDTGLGEKPLPADATEQGHPSAAIQVTQPSGPV------------LEGEHVEREKEVVPDSPGDKGSTNRGPDSGAEVEK 617
Cdd:PTZ00121 1575 DKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMkaeeakkaeeakIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKK 1654
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  618 EKETWEERKQREAElgpentaaREESEAEVKEDVIEKAELEEMEETHPSDEEGEETKAESFYQKHTQEALKASPKSREAL 697
Cdd:PTZ00121 1655 AEEENKIKAAEEAK--------KAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEE 1726
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564342546  698 GGRDLGFQGKAPEKETASFLSSLATPAGATEHVSYIQDETIPGYSETEQTISD--EEIHDEPDER 760
Cdd:PTZ00121 1727 ENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAviEEELDEEDEK 1791
PHA03247 PHA03247
large tegument protein UL36; Provisional
1986-2445 9.03e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 61.49  E-value: 9.03e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1986 PASPQNLQSDTPAFSYASLAGPAVPPRQEPDPGPNVEPSITPPAVPPRAPISL--------------------SKDLSPP 2045
Cdd:PHA03247 2475 PGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEpvhprmltwirgleelasddAGDPPPP 2554
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2046 LNGSTVSCSPDRRTPSPK---------------------ETGRGHWDDGTNDSDLEKGAREQPEKETRSPSPHHPMPMGH 2104
Cdd:PHA03247 2555 LPPAAPPAAPDRSVPPPRpaprpsepavtsrarrpdappQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPA 2634
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2105 SSLWPETEAYSSLSSDSHLGSVRP---SLDFPASAFGFSSLQPAPPQLPSPAEPRsAPCGSLAFSGD----------RAL 2171
Cdd:PHA03247 2635 ANEPDPHPPPTVPPPERPRDDPAPgrvSRPRRARRLGRAAQASSPPQRPRRRAAR-PTVGSLTSLADpppppptpepAPH 2713
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2172 ALVPGTPTRTRHDEYLEVTKAPSLDSSLPQLPS-PSSPGGPllsnlPRPASPALSEG--SSSEATTPVISSVAERFPPGL 2248
Cdd:PHA03247 2714 ALVSATPLPPGPAAARQASPALPAAPAPPAVPAgPATPGGP-----ARPARPPTTAGppAPAPPAAPAAGPPRRLTRPAV 2788
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2249 EAAEQSAEGLGSGKESAAHSLWDLTPLSPAPSASLDLAPAPAPAPAPAPAPGLPGDLGDGTLPCRPECT--GELTKKPSP 2326
Cdd:PHA03247 2789 ASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVApgGDVRRRPPS 2868
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2327 FLSPSGDHEANGPGETSLNPPGfvTATAEKEEAEAPHAWERGSWPEGAERSSRPDTLLSSEQPLRPGKSSGGPPCSLSSE 2406
Cdd:PHA03247 2869 RSPAAKPAAPARPPVRRLARPA--VSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPT 2946
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*..
gi 564342546 2407 VEAGPQGCAT--DPRPHCGELSPS------FLNPPLPPSTDDSDLST 2445
Cdd:PHA03247 2947 TDPAGAGEPSgaVPQPWLGALVPGrvavprFRVPQPAPSREAPASST 2993
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
1743-2112 5.41e-06

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 52.48  E-value: 5.41e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1743 PVGLPPEEEDKLTRSPFEIISPPASPPEMTGQRVPSAPGQESPVPDTESTAPMRNEPTTPSWLAEIPPWVPKDRPLPPAP 1822
Cdd:PHA03307   72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAAS 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1823 LSPAPAPPTPAPEPHTPVP-FSWGLAEYDSVVAAVQEGAAELEGGPYSPLGKDY---RKAEGEREGEGGAGAPDSSSFSP 1898
Cdd:PHA03307  152 PPAAGASPAAVASDAASSRqAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRpprRSSPISASASSPAPAPGRSAADD 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1899 KVPEAGESLATRDTEQTEPEQREPTPYPDERSFQYADIYEQMMLTGLGPACPTREPPLGASGDWPPHLSTKEEAAGCNTS 1978
Cdd:PHA03307  232 AGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSS 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1979 AEKeTSSPASPQNLQSDTPAFSYASLAGPAVPPRQEPDPGPNvePSITPPAVPPRAPISLSKDLSPPLNGSTVSCSPDRR 2058
Cdd:PHA03307  312 PRA-SSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPS--PSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRR 388
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 564342546 2059 TPSPKETGRGHWDDGTNDSDLEKGAREQPEKETRSPSPHHPMPMGHSS--LWPETE 2112
Cdd:PHA03307  389 RARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSgePWPGSP 444
Agg_substance NF033875
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...
1389-1611 5.29e-05

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.


Pssm-ID: 411439 [Multi-domain]  Cd Length: 1306  Bit Score: 48.94  E-value: 5.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1389 AAELDKGPEPKEKDLDREDQGQRAGPP--AEKDKASEQRDTDLQQTQATE--PRDRAQERRDSEEKDkslelrdrTPEEK 1464
Cdd:NF033875   43 AAELDTQPGTTTVQPDNPDPQSGSETPktAVSEEATVQKDTTSQPTKVEEvaSEKNGAEQSSATPND--------TTNAQ 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1465 DRILVQEDRAPEHSIPEPtQTDRAPDRKGTDDKEQKEEASeekeqvleqKDWALGKEGETLDQEARTAE-QKDETLKEDK 1543
Cdd:NF033875  115 QPTVGAEKSAQEQPVVSP-ETTNEPLGQPTEVAPAENEAN---------KSTSIPKEFETPDVDKAVDEaKKDPNITVVE 184
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564342546 1544 TQGQKSSFVEDKTTTSKETVLDQKSAEKADSVEQQdgAALEKTRALGLEESPAE-GSKAREQEKKYWKE 1611
Cdd:NF033875  185 KPAEDLGNVSSKDLAAKEKEVDQLQKEQAKKIAQQ--AAELKAKNEKIAKENAEiAAKNKAEKERYEKE 251
Atrophin-1 pfam03154
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...
1980-2222 7.78e-05

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.


Pssm-ID: 460830 [Multi-domain]  Cd Length: 991  Bit Score: 48.61  E-value: 7.78e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  1980 EKETSSPASPQNLQSDTPAFSYASlagPAVPPRQEPDPGPNVEPSITPPAVPPRAPISLSKDLSPPLNGSTVSCSPdrrt 2059
Cdd:pfam03154  155 ESDSDSSAQQQILQTQPPVLQAQS---GAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAP---- 227
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  2060 pspketgrghwddgtnDSDLEKGAREQPEketRSPSPHHPMPMGHSSLWPETEAYSSLSSDSHLGSVRPsldfpasafGF 2139
Cdd:pfam03154  228 ----------------HTLIQQTPTLHPQ---RLPSPHPPLQPMTQPPPPSQVSPQPLPQPSLHGQMPP---------MP 279
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  2140 SSLQPAPPQLPSPAEPRSAPCGSLAFSGDralaLVPGTPTRTRHDEYLEVTKAPSLDSSLPQLPSPSSPGGPLLSNLPRP 2219
Cdd:pfam03154  280 HSLQTGPSHMQHPVPPQPFPLTPQSSQSQ----VPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSMPHI 355

                   ...
gi 564342546  2220 ASP 2222
Cdd:pfam03154  356 KPP 358
ComEC COG2333
DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily ...
46-149 4.96e-04

DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 441904 [Multi-domain]  Cd Length: 253  Bit Score: 44.46  E-value: 4.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546   46 GRGDSALF-AVNGFNILVDGGSDRKSCFWKLV-------RHLDRIDSVLLTHIGADNLPGINGLLQR-KVAELEE-EQSQ 115
Cdd:COG2333     9 GQGDAILIrTPDGKTILIDTGPRPSFDAGERVvlpylraLGIRRLDLLVLTHPDADHIGGLAAVLEAfPVGRVLVsGPPD 88
                          90       100       110
                  ....*....|....*....|....*....|....
gi 564342546  116 GSSSYSDWVKNLISPELGVVFFNVPDKLRLPDAS 149
Cdd:COG2333    89 TSETYERLLEALKEKGIPVRPCRAGDTWQLGGVR 122
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
1316-1535 5.20e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 42.29  E-value: 5.20e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  1316 EWEGKAPGKEK-EPELKSETRQQKGQILPEKVAVVEQDLIIHQKDGALDEenkpgrQQDKTPEQKGRDLDEKDTAAELDK 1394
Cdd:TIGR00927  680 ESEGEIPAERKgEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDE------GEIETGEEGEEVEDEGEGEAEGKH 753
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  1395 GPEPKEKDLDREDQGQRAGPPAEKDKASEQRDTDLQQTQATEPRDRAQERRDSEEKDKSLELRDRTPEEKDRILVQEDRA 1474
Cdd:TIGR00927  754 EVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETG 833
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 564342546  1475 PEHSIPEpTQTDRAPDRKGTD-----------DKEQKEEASEEKEQVLEQKDWALGKEGETLDQEARTAEQK 1535
Cdd:TIGR00927  834 EQELNAE-NQGEAKQDEKGVDggggsdggdseEEEEEEEEEEEEEEEEEEEEEEEEENEEPLSLEWPETRQK 904
PHA03247 PHA03247
large tegument protein UL36; Provisional
2296-2624 5.82e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.62  E-value: 5.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2296 APAPGLPGDLGDGTLPCRPECTGELTKKPSPFLSPSGDHEANGPGETSLNPPgfvtataekEEAEAPHAWERGSWPEGAE 2375
Cdd:PHA03247 2598 PRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPP---------ERPRDDPAPGRVSRPRRAR 2668
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2376 RSSRPDTllSSEQPLRPGKSSGGPPC-SLSSEVEAGPQGCATDPRPHcgelsPSFLNPPLPPSTDDSDLSTEEARLAgkg 2454
Cdd:PHA03247 2669 RLGRAAQ--ASSPPQRPRRRAARPTVgSLTSLADPPPPPPTPEPAPH-----ALVSATPLPPGPAAARQASPALPAA--- 2738
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2455 grrRVGRPGATGGPCPMADETPPTSASDSGSSQSDSDVPPETEECPSITAEAALDSDEDGDFLPV--DKAGGVSGTHHPR 2532
Cdd:PHA03247 2739 ---PAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSpwDPADPPAAVLAPA 2815
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2533 PGHDPPPTPLPDPRPSPPRPDVCMADPEGLSSESGRVERLREKGRP-GRRAPGRAKPASPARRLDIRGKRSPTPgkgPVD 2611
Cdd:PHA03247 2816 AALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvRRRPPSRSPAAKPAAPARPPVRRLARP---AVS 2892
                         330
                  ....*....|...
gi 564342546 2612 RTSRTVPRPRSTP 2624
Cdd:PHA03247 2893 RSTESFALPPDQP 2905
 
Name Accession Description Interval E-value
PTZ00121 PTZ00121
MAEBL; Provisional
1370-1607 6.67e-11

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 68.63  E-value: 6.67e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1370 RQQDKTPEQKGRDLDEKDTAAELDKGPEPKEKDLDREDQGQRAGPPAEKdKASEQRDTDLQQTQATEPRDRAQE-RRDSE 1448
Cdd:PTZ00121 1261 RMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKK-KAEEAKKADEAKKKAEEAKKKADAaKKKAE 1339
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1449 EKDKSLELRDRTPEEK-DRILVQEDRApehsipeptqtdRAPDRKGTDDKEQKEEASEEKEQVleqkdwalgKEGETLDQ 1527
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAaDEAEAAEEKA------------EAAEKKKEEAKKKADAAKKKAEEK---------KKADEAKK 1398
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1528 EARTAEQKDETLKEDKTQGQKSSFVEDKTTTSKETVLDQKSAEKADSVEQQDGAALEKTRALGLEESPAEGSKAREQEKK 1607
Cdd:PTZ00121 1399 KAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKK 1478
PTZ00121 PTZ00121
MAEBL; Provisional
1320-1625 1.18e-10

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 67.86  E-value: 1.18e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1320 KAPGKEKEPELKSETRQQKGQIL--PEKVAVVEQDLIIHQKDGALDEENKPGRQQDKTPEQKGRDLDEKDTAAELDKGPE 1397
Cdd:PTZ00121 1273 KAEEARKADELKKAEEKKKADEAkkAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEA 1352
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1398 PKEKD-------------LDREDQGQRAgpPAEKDKASEQRDTDLQQTQATEPRDRAQERRDSEEKDKSLELRDRTPEEK 1464
Cdd:PTZ00121 1353 EAAADeaeaaeekaeaaeKKKEEAKKKA--DAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEK 1430
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1465 DRILVQEDRAPEHSIPEPTQTDRAPDRKGTDDKEQKEEA--SEEKEQVLEQKdwalgKEGETLDQEARTAEQKDETLKED 1542
Cdd:PTZ00121 1431 KKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAkkADEAKKKAEEA-----KKADEAKKKAEEAKKKADEAKKA 1505
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1543 KTQGQKSSfvEDKTTTSKETVLDQKSAEKADSVEQQDGAAlEKTRALGL----EESPAEGSKAREQEKKywKEQDVVQGW 1618
Cdd:PTZ00121 1506 AEAKKKAD--EAKKAEEAKKADEAKKAEEAKKADEAKKAE-EKKKADELkkaeELKKAEEKKKAEEAKK--AEEDKNMAL 1580

                  ....*..
gi 564342546 1619 RETSPTR 1625
Cdd:PTZ00121 1581 RKAEEAK 1587
PTZ00121 PTZ00121
MAEBL; Provisional
1314-1656 3.38e-10

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 66.32  E-value: 3.38e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1314 AVEWEGKAPGKEKEPELKSETRQQK-----GQILPEKVAVVEQDLIIHQKDGAlDEENKPGRQQDKTPEQKGRDLDEKDT 1388
Cdd:PTZ00121 1433 ADEAKKKAEEAKKADEAKKKAEEAKkaeeaKKKAEEAKKADEAKKKAEEAKKA-DEAKKKAEEAKKKADEAKKAAEAKKK 1511
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1389 AAELDKGPEPKEKDLDREDQGQRAGPPA----EKDKASEQRDTDlQQTQATEPRDRAQERRDSEEKD------------- 1451
Cdd:PTZ00121 1512 ADEAKKAEEAKKADEAKKAEEAKKADEAkkaeEKKKADELKKAE-ELKKAEEKKKAEEAKKAEEDKNmalrkaeeakkae 1590
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1452 -KSLELRDRTPEEKDRILVQEDRAPEHSIPEPTQTDRAPD-RKGTDDKEQKEEASEEKEQVLEQKDWALGKEGETLDQEA 1529
Cdd:PTZ00121 1591 eARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEeKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKA 1670
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1530 RTAEQKDETLK---EDKTQGQKSSFVEDKTTTSKETVLDQKSAEKADSVEQQDGAALEKTRALGLEESPAEGSKAREQEK 1606
Cdd:PTZ00121 1671 EEDKKKAEEAKkaeEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAK 1750
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 564342546 1607 KYWKEQDVVQGWRETSPTRGEPVGGQKEPVPAWEGKSPEQEVRYWRDRDI 1656
Cdd:PTZ00121 1751 KDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI 1800
PTZ00121 PTZ00121
MAEBL; Provisional
311-760 5.53e-09

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 62.47  E-value: 5.53e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  311 SKIKHRADSKESLKAAPKTAVSKLAKREEVLEEGAKEARSELAKELAKTEKKAKEPSEKPPEKPSKSERVRGESSEALKA 390
Cdd:PTZ00121 1341 AKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKA 1420
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  391 EK-RRLIKDKAGKKHLKEKISKLEEKKDKEKKEIKKERKELKKEEGRKEEKKDAKKDEKRKDTKPEVKKLSKPDLKPFTP 469
Cdd:PTZ00121 1421 DEaKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKAD 1500
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  470 EVRKtlykaKAPGRVKVDKGRAARGEKELSSEPRTPPAQKGAAPPAAVSGHRELALSSPEDLTQDfEELKREERGLLAEQ 549
Cdd:PTZ00121 1501 EAKK-----AAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKA-EEKKKAEEAKKAEE 1574
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  550 RDTGLGEKPLPADATEQGHPSAAIQVTQPSGPV------------LEGEHVEREKEVVPDSPGDKGSTNRGPDSGAEVEK 617
Cdd:PTZ00121 1575 DKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMkaeeakkaeeakIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKK 1654
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  618 EKETWEERKQREAElgpentaaREESEAEVKEDVIEKAELEEMEETHPSDEEGEETKAESFYQKHTQEALKASPKSREAL 697
Cdd:PTZ00121 1655 AEEENKIKAAEEAK--------KAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEE 1726
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564342546  698 GGRDLGFQGKAPEKETASFLSSLATPAGATEHVSYIQDETIPGYSETEQTISD--EEIHDEPDER 760
Cdd:PTZ00121 1727 ENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAviEEELDEEDEK 1791
PHA03247 PHA03247
large tegument protein UL36; Provisional
1986-2445 9.03e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 61.49  E-value: 9.03e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1986 PASPQNLQSDTPAFSYASLAGPAVPPRQEPDPGPNVEPSITPPAVPPRAPISL--------------------SKDLSPP 2045
Cdd:PHA03247 2475 PGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEpvhprmltwirgleelasddAGDPPPP 2554
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2046 LNGSTVSCSPDRRTPSPK---------------------ETGRGHWDDGTNDSDLEKGAREQPEKETRSPSPHHPMPMGH 2104
Cdd:PHA03247 2555 LPPAAPPAAPDRSVPPPRpaprpsepavtsrarrpdappQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPA 2634
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2105 SSLWPETEAYSSLSSDSHLGSVRP---SLDFPASAFGFSSLQPAPPQLPSPAEPRsAPCGSLAFSGD----------RAL 2171
Cdd:PHA03247 2635 ANEPDPHPPPTVPPPERPRDDPAPgrvSRPRRARRLGRAAQASSPPQRPRRRAAR-PTVGSLTSLADpppppptpepAPH 2713
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2172 ALVPGTPTRTRHDEYLEVTKAPSLDSSLPQLPS-PSSPGGPllsnlPRPASPALSEG--SSSEATTPVISSVAERFPPGL 2248
Cdd:PHA03247 2714 ALVSATPLPPGPAAARQASPALPAAPAPPAVPAgPATPGGP-----ARPARPPTTAGppAPAPPAAPAAGPPRRLTRPAV 2788
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2249 EAAEQSAEGLGSGKESAAHSLWDLTPLSPAPSASLDLAPAPAPAPAPAPAPGLPGDLGDGTLPCRPECT--GELTKKPSP 2326
Cdd:PHA03247 2789 ASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVApgGDVRRRPPS 2868
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2327 FLSPSGDHEANGPGETSLNPPGfvTATAEKEEAEAPHAWERGSWPEGAERSSRPDTLLSSEQPLRPGKSSGGPPCSLSSE 2406
Cdd:PHA03247 2869 RSPAAKPAAPARPPVRRLARPA--VSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPT 2946
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*..
gi 564342546 2407 VEAGPQGCAT--DPRPHCGELSPS------FLNPPLPPSTDDSDLST 2445
Cdd:PHA03247 2947 TDPAGAGEPSgaVPQPWLGALVPGrvavprFRVPQPAPSREAPASST 2993
PTZ00121 PTZ00121
MAEBL; Provisional
311-696 1.73e-07

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 57.46  E-value: 1.73e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  311 SKIKHRADSKESLKAAPKTAVSKLAKREEV-----LEEGAKEARSELAKELAKTEKKAKEPSEKPPEKPSKSERVRGESS 385
Cdd:PTZ00121 1260 ARMAHFARRQAAIKAEEARKADELKKAEEKkkadeAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAE 1339
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  386 EALKAEKRRLIKDKAGKKHLKEKISKLEEKKDKEKKEIKKERKELKKEEGRKEEKKDAKKDEKRKDTKPEVKKLSKP--- 462
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAkkk 1419
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  463 --DLKPFTPEVRKT-LYKAKAPGRVKVDKGRAARGEKELSSEPRTPPAQKGAAPPAAVSGHR-----------ELALSSP 528
Cdd:PTZ00121 1420 adEAKKKAEEKKKAdEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEakkadeakkkaEEAKKKA 1499
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  529 EDLTQDFEELKREERGLLAEQRDTglGEKPLPADATEQGHPSAAIQVTQPSGPVLEGEHVEREKEV-----VPDSPGDKG 603
Cdd:PTZ00121 1500 DEAKKAAEAKKKADEAKKAEEAKK--ADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKkkaeeAKKAEEDKN 1577
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  604 STNRGPDSGAEVEkEKETWEERKQREAELGPENTAAREESEAEVK-EDVIEKAELEEMEETHPSDEEGEETKAESFYQKH 682
Cdd:PTZ00121 1578 MALRKAEEAKKAE-EARIEEVMKLYEEEKKMKAEEAKKAEEAKIKaEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAE 1656
                         410
                  ....*....|....
gi 564342546  683 TQEALKASPKSREA 696
Cdd:PTZ00121 1657 EENKIKAAEEAKKA 1670
PTZ00121 PTZ00121
MAEBL; Provisional
1320-1614 1.33e-06

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 54.38  E-value: 1.33e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1320 KAPGKEKEPELKS-------ETRQQKGQILPEKVAVVEQDLIIHQKDGALDEENKPGRQQDKTPEQ--KGRDLDEKDTAA 1390
Cdd:PTZ00121 1565 KAEEAKKAEEDKNmalrkaeEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEekKKVEQLKKKEAE 1644
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1391 ELDKGPEPKEKDldrEDQGQRAGPPAEKDKASEQRDTDLQQTQATEPRDRAQERRDSEEKDKSLELRDRTPEEKdRILVQ 1470
Cdd:PTZ00121 1645 EKKKAEELKKAE---EENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEK-KKAEE 1720
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1471 EDRAPEHSIPEPTQTdrapDRKGTDDKEQKEEASEEKEQvlEQKDWALGKEGETLDQEARtaEQKDETLKED-KTQGQKS 1549
Cdd:PTZ00121 1721 LKKAEEENKIKAEEA----KKEAEEDKKKAEEAKKDEEE--KKKIAHLKKEEEKKAEEIR--KEKEAVIEEElDEEDEKR 1792
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1550 SFVEDKTT----------------------TSKETvLDQKSAEKADSVEQQ--DGAALEKTRALGLEESPAEGSK-AREQ 1604
Cdd:PTZ00121 1793 RMEVDKKIkdifdnfaniieggkegnlvinDSKEM-EDSAIKEVADSKNMQleEADAFEKHKFNKNNENGEDGNKeADFN 1871
                         330
                  ....*....|
gi 564342546 1605 EKKYWKEQDV 1614
Cdd:PTZ00121 1872 KEKDLKEDDE 1881
PTZ00121 PTZ00121
MAEBL; Provisional
1378-1607 3.17e-06

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 53.22  E-value: 3.17e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1378 QKGRDLDEKDTAAELDKGPE-PKEKDLDREDQGQRAgppAEKDKASEQRdtdlqqtQATEPRdRAQERR-------DSEE 1449
Cdd:PTZ00121 1173 EDAKKAEAARKAEEVRKAEElRKAEDARKAEAARKA---EEERKAEEAR-------KAEDAK-KAEAVKkaeeakkDAEE 1241
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1450 KDKSLELRDRTPEEKDRILVQEDRAPEHSIPEPTQTDRAPDRKGTDDKEQKEEA--SEEKEQVLEQKDWA-LGKEGETLD 1526
Cdd:PTZ00121 1242 AKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAkkAEEKKKADEAKKKAeEAKKADEAK 1321
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1527 QEARTAEQKDETLKEDKTQGQKSSFVEDKTTTSKETVLdQKSAEKADSVEQQDGAalEKTRALGLEESPAEGSKAREQEK 1606
Cdd:PTZ00121 1322 KKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEA-EAAEEKAEAAEKKKEE--AKKKADAAKKKAEEKKKADEAKK 1398

                  .
gi 564342546 1607 K 1607
Cdd:PTZ00121 1399 K 1399
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
1743-2112 5.41e-06

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 52.48  E-value: 5.41e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1743 PVGLPPEEEDKLTRSPFEIISPPASPPEMTGQRVPSAPGQESPVPDTESTAPMRNEPTTPSWLAEIPPWVPKDRPLPPAP 1822
Cdd:PHA03307   72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAAS 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1823 LSPAPAPPTPAPEPHTPVP-FSWGLAEYDSVVAAVQEGAAELEGGPYSPLGKDY---RKAEGEREGEGGAGAPDSSSFSP 1898
Cdd:PHA03307  152 PPAAGASPAAVASDAASSRqAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRpprRSSPISASASSPAPAPGRSAADD 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1899 KVPEAGESLATRDTEQTEPEQREPTPYPDERSFQYADIYEQMMLTGLGPACPTREPPLGASGDWPPHLSTKEEAAGCNTS 1978
Cdd:PHA03307  232 AGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSS 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1979 AEKeTSSPASPQNLQSDTPAFSYASLAGPAVPPRQEPDPGPNvePSITPPAVPPRAPISLSKDLSPPLNGSTVSCSPDRR 2058
Cdd:PHA03307  312 PRA-SSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPS--PSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRR 388
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 564342546 2059 TPSPKETGRGHWDDGTNDSDLEKGAREQPEKETRSPSPHHPMPMGHSS--LWPETE 2112
Cdd:PHA03307  389 RARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSgePWPGSP 444
PHA03247 PHA03247
large tegument protein UL36; Provisional
1761-2246 1.33e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 1.33e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1761 IISPPASPPEMTGQRVPSAPGQESPVPDTESTAPmrNEPTTPSWLAEIPPWVPkdrplpPAPLSPAPAPPTPAPEPHTPV 1840
Cdd:PHA03247 2459 ILGAPFSLSLLLGELFPGAPVYRRPAEARFPFAA--GAAPDPGGGGPPDPDAP------PAPSRLAPAILPDEPVGEPVH 2530
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1841 PFSWglaeydSVVAAVQEGAAELEGGPYSPLGKDYRKAEGEREGEGGAGAP-------DSSSFSPKVP-EAGESLATRDT 1912
Cdd:PHA03247 2531 PRML------TWIRGLEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPrpsepavTSRARRPDAPpQSARPRAPVDD 2604
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1913 EQTEPEQREPTPYPDERSfqyadiyeQMMLTGLGPACPTREPPLGASGDWPPHLSTKEEAAGCNTSAEKETSSPASPQNL 1992
Cdd:PHA03247 2605 RGDPRGPAPPSPLPPDTH--------APDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQA 2676
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1993 QSDT----------PAFSYASLAGPAVPPRQ-EPDPGPNVEPSITPP---AVPPRAPISLSKDLSPPLNGSTVSCSPDRR 2058
Cdd:PHA03247 2677 SSPPqrprrraarpTVGSLTSLADPPPPPPTpEPAPHALVSATPLPPgpaAARQASPALPAAPAPPAVPAGPATPGGPAR 2756
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2059 TPSPKETgrghwddGTNDSDLEKGAREQPEKETRSPSPHHPMPMGHSSLWPETEAYSSLSSDSHLGSVRPSLDFPASAFG 2138
Cdd:PHA03247 2757 PARPPTT-------AGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP 2829
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2139 --FSSLQPAPPQLPSPAEPRSAPCGSLAFSGD-------RALALVPGTPTRTRhdeyleVTKAPSLDSSLPQLPSPSSPG 2209
Cdd:PHA03247 2830 ppTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrppsRSPAAKPAAPARPP------VRRLARPAVSRSTESFALPPD 2903
                         490       500       510
                  ....*....|....*....|....*....|....*..
gi 564342546 2210 GPllsnlPRPASPALSEGSSSEATTPVISSVAERFPP 2246
Cdd:PHA03247 2904 QP-----ERPPQPQAPPPPQPQPQPPPPPQPQPPPPP 2935
PHA03247 PHA03247
large tegument protein UL36; Provisional
1986-2559 1.49e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 1.49e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1986 PASPQNLQSDTPAFSYASLAGPAVPPR--------------QEPDPGPNVEPSITPPA----VPPRAPislskdlSPPLN 2047
Cdd:PHA03247 2506 PDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelasdDAGDPPPPLPPAAPPAApdrsVPPPRP-------APRPS 2578
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2048 GSTVScSPDRRTPSPKETGRGHWDDGTNDSDLEKGAREQPEKETRSPSPHHPMPMGHSSLWPETEAYSSLSSDSHLGSVR 2127
Cdd:PHA03247 2579 EPAVT-SRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPA 2657
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2128 P---SLDFPASAFGFSSLQPAPPQLPSPAEPRsAPCGSLAFSGD----------RALALVPGTPTRTRHDEYLEVTKAPS 2194
Cdd:PHA03247 2658 PgrvSRPRRARRLGRAAQASSPPQRPRRRAAR-PTVGSLTSLADpppppptpepAPHALVSATPLPPGPAAARQASPALP 2736
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2195 LDSSLPQLPS-PSSPGGPllsnlPRPASPALSEG--SSSEATTPVISSVAERFPPGLEAAEQSAEGLGSGKESAAHSLWD 2271
Cdd:PHA03247 2737 AAPAPPAVPAgPATPGGP-----ARPARPPTTAGppAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAV 2811
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2272 LTPLSPAPSASLDLAPAPAPAPAPAPAPGLPGDLGDGTLPCRPECT--GELTKKPSPFLSPSGDHEANGPGETSLNPPGf 2349
Cdd:PHA03247 2812 LAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVApgGDVRRRPPSRSPAAKPAAPARPPVRRLARPA- 2890
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2350 vTATAEKEEAEAPHAWERGSWPEGAERSSRPDTLLSSEQPLRPGKSSGGPPCSLSSEVEAGPQGCATD--PRPHCGELSP 2427
Cdd:PHA03247 2891 -VSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGavPQPWLGALVP 2969
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2428 S------FLNPPLPPSTDDSDLSTEEARLAGKGGRRRVGRPGATggpcpMADETPPTSASDsgssqsdsdvppETEECPS 2501
Cdd:PHA03247 2970 GrvavprFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLAL-----HEETDPPPVSLK------------QTLWPPD 3032
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 564342546 2502 ITAEAALDSDEDGDFLPVDkaggvsgTHHPRPGHDPPPTPLPDPRPSPPRPDVCMADP 2559
Cdd:PHA03247 3033 DTEDSDADSLFDSDSERSD-------LEALDPLPPEPHDPFAHEPDPATPEAGARESP 3083
PTZ00121 PTZ00121
MAEBL; Provisional
1294-1649 2.32e-05

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 50.52  E-value: 2.32e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1294 SDSSLTKSPESLSSPAMED-----LAVEWEGKAPGKEKEPELKSETRQQKGQILPEKVAVVEQDLIIHQKDGALDEENKp 1368
Cdd:PTZ00121 1068 QDEGLKPSYKDFDFDAKEDnradeATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEAR- 1146
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1369 gRQQDKTPEQKGRDLDEKDTAAELDKGPEPKEKDLDREDQGQRAGPpaEKDKASEQRDtdLQQTQATEPRDRAQERRDSE 1448
Cdd:PTZ00121 1147 -KAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAE--ELRKAEDARK--AEAARKAEEERKAEEARKAE 1221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1449 EKDKSLELRD----RTPEEKDRILVQEDRAPEHSIPEPTQTDRAPDRKGTDDKEQKEEA-----SEEKEQVLEQKDWALG 1519
Cdd:PTZ00121 1222 DAKKAEAVKKaeeaKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAdelkkAEEKKKADEAKKAEEK 1301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1520 KEGETLDQEARTAEQKDETLKEDKTQGQKSSFVEDKTTTSKET-----VLDQKSAEKADSVEQQDGAALEKTRAlglEES 1594
Cdd:PTZ00121 1302 KKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAaeaakAEAEAAADEAEAAEEKAEAAEKKKEE---AKK 1378
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 564342546 1595 PAEGSKAREQEKKywKEQDVVQGWRETSPTRGEPVGGQKEPVPAWEGKSPEQEVR 1649
Cdd:PTZ00121 1379 KADAAKKKAEEKK--KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKK 1431
Agg_substance NF033875
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...
1389-1611 5.29e-05

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.


Pssm-ID: 411439 [Multi-domain]  Cd Length: 1306  Bit Score: 48.94  E-value: 5.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1389 AAELDKGPEPKEKDLDREDQGQRAGPP--AEKDKASEQRDTDLQQTQATE--PRDRAQERRDSEEKDkslelrdrTPEEK 1464
Cdd:NF033875   43 AAELDTQPGTTTVQPDNPDPQSGSETPktAVSEEATVQKDTTSQPTKVEEvaSEKNGAEQSSATPND--------TTNAQ 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1465 DRILVQEDRAPEHSIPEPtQTDRAPDRKGTDDKEQKEEASeekeqvleqKDWALGKEGETLDQEARTAE-QKDETLKEDK 1543
Cdd:NF033875  115 QPTVGAEKSAQEQPVVSP-ETTNEPLGQPTEVAPAENEAN---------KSTSIPKEFETPDVDKAVDEaKKDPNITVVE 184
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564342546 1544 TQGQKSSFVEDKTTTSKETVLDQKSAEKADSVEQQdgAALEKTRALGLEESPAE-GSKAREQEKKYWKE 1611
Cdd:NF033875  185 KPAEDLGNVSSKDLAAKEKEVDQLQKEQAKKIAQQ--AAELKAKNEKIAKENAEiAAKNKAEKERYEKE 251
Atrophin-1 pfam03154
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...
1980-2222 7.78e-05

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.


Pssm-ID: 460830 [Multi-domain]  Cd Length: 991  Bit Score: 48.61  E-value: 7.78e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  1980 EKETSSPASPQNLQSDTPAFSYASlagPAVPPRQEPDPGPNVEPSITPPAVPPRAPISLSKDLSPPLNGSTVSCSPdrrt 2059
Cdd:pfam03154  155 ESDSDSSAQQQILQTQPPVLQAQS---GAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAP---- 227
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  2060 pspketgrghwddgtnDSDLEKGAREQPEketRSPSPHHPMPMGHSSLWPETEAYSSLSSDSHLGSVRPsldfpasafGF 2139
Cdd:pfam03154  228 ----------------HTLIQQTPTLHPQ---RLPSPHPPLQPMTQPPPPSQVSPQPLPQPSLHGQMPP---------MP 279
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  2140 SSLQPAPPQLPSPAEPRSAPCGSLAFSGDralaLVPGTPTRTRHDEYLEVTKAPSLDSSLPQLPSPSSPGGPLLSNLPRP 2219
Cdd:pfam03154  280 HSLQTGPSHMQHPVPPQPFPLTPQSSQSQ----VPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSMPHI 355

                   ...
gi 564342546  2220 ASP 2222
Cdd:pfam03154  356 KPP 358
ComEC COG2333
DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily ...
46-149 4.96e-04

DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 441904 [Multi-domain]  Cd Length: 253  Bit Score: 44.46  E-value: 4.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546   46 GRGDSALF-AVNGFNILVDGGSDRKSCFWKLV-------RHLDRIDSVLLTHIGADNLPGINGLLQR-KVAELEE-EQSQ 115
Cdd:COG2333     9 GQGDAILIrTPDGKTILIDTGPRPSFDAGERVvlpylraLGIRRLDLLVLTHPDADHIGGLAAVLEAfPVGRVLVsGPPD 88
                          90       100       110
                  ....*....|....*....|....*....|....
gi 564342546  116 GSSSYSDWVKNLISPELGVVFFNVPDKLRLPDAS 149
Cdd:COG2333    89 TSETYERLLEALKEKGIPVRPCRAGDTWQLGGVR 122
PHA03247 PHA03247
large tegument protein UL36; Provisional
1764-2268 5.52e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.70  E-value: 5.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1764 PPASPPEMTGQRVP-SAPGQESPVPDTESTA------PMRNEPTTPSWLAEIPPWVPKDRPLPPAPlspapapptpapep 1836
Cdd:PHA03247 2556 PPAAPPAAPDRSVPpPRPAPRPSEPAVTSRArrpdapPQSARPRAPVDDRGDPRGPAPPSPLPPDT-------------- 2621
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1837 htpvpfswglaeydsvvaavqegaAELEGGPYSPLGKDYRKAEGEREGEGGAGAPDSSSFSPKVpeageSLATRDTEQTE 1916
Cdd:PHA03247 2622 ------------------------HAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRV-----SRPRRARRLGR 2672
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1917 PEQREPTPYPDERsfqyadiyeqmmltglgPACPTREPPLGASGDWPPHLSTKEEAAGCNTSAEKETSSPASPQNLQSDT 1996
Cdd:PHA03247 2673 AAQASSPPQRPRR-----------------RAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPAL 2735
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1997 PAFSY--ASLAGPAVPPRQEPDPGPNVePSITPPAVPPRAPISLSKDLSPPLNGSTVSCSPDrRTPSPKETGrghwddgt 2074
Cdd:PHA03247 2736 PAAPAppAVPAGPATPGGPARPARPPT-TAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRE-SLPSPWDPA-------- 2805
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2075 nDSDLEKGAREQPEKETRSPSPHHPMPMGHSSLWPETEAYSSLSSDSHLGSVRPSLDFPASAfgfsslqPAPPQLPSPAE 2154
Cdd:PHA03247 2806 -DPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRP-------PSRSPAAKPAA 2877
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2155 PRSAPCGSLAFSG----DRALALVPGTPTRTRH----DEYLEVTKAPSLDSSLPQLPSPSSPGGPLLSNL-------PRP 2219
Cdd:PHA03247 2878 PARPPVRRLARPAvsrsTESFALPPDQPERPPQpqapPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTdpagagePSG 2957
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*....
gi 564342546 2220 ASPALSEGSSSEATTPVISSVAERFPPGLEAAEQSAEGLGSGKESAAHS 2268
Cdd:PHA03247 2958 AVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSS 3006
PTZ00121 PTZ00121
MAEBL; Provisional
309-649 6.13e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 45.52  E-value: 6.13e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  309 KPSKIKHRADSKESLKAAPKTAvSKLAKREEV--LEEGAKEARSELAKELAKTEKKAKEPSEKPPEKPSKSERVRgESSE 386
Cdd:PTZ00121 1491 KAEEAKKKADEAKKAAEAKKKA-DEAKKAEEAkkADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKK-KAEE 1568
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  387 ALKAEKRRL-------IKDKAGKKHLKEKISKLEEKKDKEKKEIKKERKELKKEEGRKEEKkdakkdekrkdtkpEVKKL 459
Cdd:PTZ00121 1569 AKKAEEDKNmalrkaeEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAE--------------EEKKK 1634
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  460 SKPDLKPFTPEVRKTLYKAKAPGRVKVDKGRAARGEKElsseprtppaQKGAAppaavsghrELALSSPEDLTQDFEELK 539
Cdd:PTZ00121 1635 VEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEE----------DKKKA---------EEAKKAEEDEKKAAEALK 1695
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  540 RE-ERGLLAEQRDTGLGEKPLPADATEQGHPSAAIQVTQPSgpvlegEHVEREKEVVPDSPGDKGSTNRGPDSGAEVEKE 618
Cdd:PTZ00121 1696 KEaEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAK------KEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKK 1769
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 564342546  619 KEtwEERKQREA----ELGPENTAAREESEAEVKE 649
Cdd:PTZ00121 1770 AE--EIRKEKEAvieeELDEEDEKRRMEVDKKIKD 1802
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
1901-2235 2.59e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 43.62  E-value: 2.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1901 PEAGESLATRDTEQTE-PEQREPTPYPDERSFQyadiyeQMMLTGLGPACPTREPPLGASGDWPPHLSTKEEAAGCNTSA 1979
Cdd:PHA03307  106 PTPPGPSSPDPPPPTPpPASPPPSPAPDLSEML------RPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSP 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1980 EKETSSPASPQnlqSDTPAFSYASLAGPAVPPRQEPDPGPNVEPSITPPAVPPRAPISLSKDLSP--------------- 2044
Cdd:PHA03307  180 EETARAPSSPP---AEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSsessgcgwgpenecp 256
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2045 -PLNGSTVSCSPDRRTPSPKETGRGHWDDGTNDSDLEKGAREQPEKETRSPSPHHPMPMGHSSLWPEteaySSLSSDSHL 2123
Cdd:PHA03307  257 lPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRE----SSSSSTSSS 332
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2124 GSVRPSLDFPASAFGFSSLQPAPPQLPSPAEPRSAPCGSLAFSGDRALAlvPGTPTRTRhdeylevTKAPSLDSSLPQLP 2203
Cdd:PHA03307  333 SESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAAS--AGRPTRRR-------ARAAVAGRARRRDA 403
                         330       340       350
                  ....*....|....*....|....*....|..
gi 564342546 2204 SPSSPGGPllsnlPRPASPALSEGSSSEATTP 2235
Cdd:PHA03307  404 TGRFPAGR-----PRPSPLDAGAASGAFYARY 430
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
1316-1535 5.20e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 42.29  E-value: 5.20e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  1316 EWEGKAPGKEK-EPELKSETRQQKGQILPEKVAVVEQDLIIHQKDGALDEenkpgrQQDKTPEQKGRDLDEKDTAAELDK 1394
Cdd:TIGR00927  680 ESEGEIPAERKgEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDE------GEIETGEEGEEVEDEGEGEAEGKH 753
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  1395 GPEPKEKDLDREDQGQRAGPPAEKDKASEQRDTDLQQTQATEPRDRAQERRDSEEKDKSLELRDRTPEEKDRILVQEDRA 1474
Cdd:TIGR00927  754 EVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETG 833
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 564342546  1475 PEHSIPEpTQTDRAPDRKGTD-----------DKEQKEEASEEKEQVLEQKDWALGKEGETLDQEARTAEQK 1535
Cdd:TIGR00927  834 EQELNAE-NQGEAKQDEKGVDggggsdggdseEEEEEEEEEEEEEEEEEEEEEEEEENEEPLSLEWPETRQK 904
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
2194-2667 5.57e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 42.47  E-value: 5.57e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2194 SLDSSLPQLPSPSSPGGPLlSNLPRPASPALSEGSSSEATTP--VISSVAERFPPGLEAAEQSAEGLGSGKESAAHSLWD 2271
Cdd:PHA03307   13 AAAEGGEFFPRPPATPGDA-ADDLLSGSQGQLVSDSAELAAVtvVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2272 LTPLSPAPSASldlapapapapapapaPGLPGDLGDGTLPCRPectgeltkKPSPFLSPSGDHeanGPGETSLNPPGFVT 2351
Cdd:PHA03307   92 LSTLAPASPAR----------------EGSPTPPGPSSPDPPP--------PTPPPASPPPSP---APDLSEMLRPVGSP 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2352 ATAEKEEAEAPHAwERGSWPEGAERSSRPDTLLSSEQPLRPGKSSGGPPCSLSSEVEAGPqgcATDPRPHCGELSPSFLN 2431
Cdd:PHA03307  145 GPPPAASPPAAGA-SPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAAS---PRPPRRSSPISASASSP 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2432 PPLPPSTDDSDlsteeARLAGKGGRRRVGRPGATGGPCPMADETPPTSASDSGSSQSDSDVPPETEecPSITAEAALDSD 2511
Cdd:PHA03307  221 APAPGRSAADD-----AGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSR--PGPASSSSSPRE 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2512 EDGDFLPVDKAGGVSGTHHPRPGHDPPPTPLpdprpspprpdvcmADPEGLSSESGRVERLREKGRPGRRAPGRAKPASP 2591
Cdd:PHA03307  294 RSPSPSPSSPGSGPAPSSPRASSSSSSSRES--------------SSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPP 359
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564342546 2592 AR--RLDIRGKRSPTPGKGPVDRTSRTVPRPRSTPSQVTSAEEKDGHSPMSKGLVNGLKAGSTAlGSKGGSGPPVYVD 2667
Cdd:PHA03307  360 ADpsSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAAS-GAFYARYPLLTPS 436
PHA03247 PHA03247
large tegument protein UL36; Provisional
2296-2624 5.82e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.62  E-value: 5.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2296 APAPGLPGDLGDGTLPCRPECTGELTKKPSPFLSPSGDHEANGPGETSLNPPgfvtataekEEAEAPHAWERGSWPEGAE 2375
Cdd:PHA03247 2598 PRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPP---------ERPRDDPAPGRVSRPRRAR 2668
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2376 RSSRPDTllSSEQPLRPGKSSGGPPC-SLSSEVEAGPQGCATDPRPHcgelsPSFLNPPLPPSTDDSDLSTEEARLAgkg 2454
Cdd:PHA03247 2669 RLGRAAQ--ASSPPQRPRRRAARPTVgSLTSLADPPPPPPTPEPAPH-----ALVSATPLPPGPAAARQASPALPAA--- 2738
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2455 grrRVGRPGATGGPCPMADETPPTSASDSGSSQSDSDVPPETEECPSITAEAALDSDEDGDFLPV--DKAGGVSGTHHPR 2532
Cdd:PHA03247 2739 ---PAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSpwDPADPPAAVLAPA 2815
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2533 PGHDPPPTPLPDPRPSPPRPDVCMADPEGLSSESGRVERLREKGRP-GRRAPGRAKPASPARRLDIRGKRSPTPgkgPVD 2611
Cdd:PHA03247 2816 AALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvRRRPPSRSPAAKPAAPARPPVRRLARP---AVS 2892
                         330
                  ....*....|...
gi 564342546 2612 RTSRTVPRPRSTP 2624
Cdd:PHA03247 2893 RSTESFALPPDQP 2905
PRK12678 PRK12678
transcription termination factor Rho; Provisional
1321-1507 7.52e-03

transcription termination factor Rho; Provisional


Pssm-ID: 237171 [Multi-domain]  Cd Length: 672  Bit Score: 41.81  E-value: 7.52e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1321 APGKEKEPELKSETRQQKGQILPEKVAVVEQDLIIHQKDGALDEENKPGRQQDKTPEQKGRDLDEKDTAAELDKGPEPKE 1400
Cdd:PRK12678   76 AARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATE 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1401 KDLDREDQGQRAGPPAEKDKASEQRDTDLQQTQATEPRDRAQ---ERRDSEEKDkslELRDRTPEEKDRILVQEDRAPEH 1477
Cdd:PRK12678  156 ARADAAERTEEEERDERRRRGDREDRQAEAERGERGRREERGrdgDDRDRRDRR---EQGDRREERGRRDGGDRRGRRRR 232
                         170       180       190
                  ....*....|....*....|....*....|
gi 564342546 1478 SIPEPTQTDRAPDRKGTDDKEQKEEASEEK 1507
Cdd:PRK12678  233 RDRRDARGDDNREDRGDRDGDDGEGRGGRR 262
PTZ00121 PTZ00121
MAEBL; Provisional
312-714 7.55e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 42.05  E-value: 7.55e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  312 KIKHRADSKESLKAAPKTAVSKLAKREEVLEEGAKEARSELAKELAKTEKKAKEPSEKPPEKPSKSERVRGESSEALKAE 391
Cdd:PTZ00121 1167 EEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAE 1246
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  392 KRRlikdkagkkhLKEKISKLEEKKDKEKKEIKKERKELKKEEGRKEEKKDAKKDEKRKDTKPEVKKLSkpDLKPFTPEV 471
Cdd:PTZ00121 1247 EER----------NNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKAD--EAKKKAEEA 1314
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  472 RKT--LYKAKAPGRVKVDKGRAARGEKELSSEPRTPPAQKGAAPPAAVSGHRELALSSPEDLTQDFEELKREergllAEQ 549
Cdd:PTZ00121 1315 KKAdeAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKK-----AEE 1389
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  550 RdtglgEKPLPADATEQGHPSAAIQVTQPSGPVLEGEHVEREKEVV--PDSPGDKGSTNRGPDSGAEVEKEKETWEERKQ 627
Cdd:PTZ00121 1390 K-----KKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKkkADEAKKKAEEAKKADEAKKKAEEAKKAEEAKK 1464
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546  628 REAELGPENTAAREESEAEVKEDVIEKAELEEMEETHPSDEEGEETKAESFyqKHTQEALKASpKSREALGGRDLGFQGK 707
Cdd:PTZ00121 1465 KAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEA--KKAEEAKKAD-EAKKAEEAKKADEAKK 1541

                  ....*..
gi 564342546  708 APEKETA 714
Cdd:PTZ00121 1542 AEEKKKA 1548
PHA03247 PHA03247
large tegument protein UL36; Provisional
1765-2279 8.07e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.85  E-value: 8.07e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1765 PASPPEMTGQRVPSAPGQESPVPDTESTAPMRNEPTTPswlaeiPPwvpkdrplppapLSPAPAPPTPAPEPHTPVPFSW 1844
Cdd:PHA03247 2589 PDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDP------PP------------PSPSPAANEPDPHPPPTVPPPE 2650
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1845 GLAEYDSVVAAVQEGAAELEG---GPYSPLGKDYRKAEGER----------EGEGGAGAPDSSSFSPKVPEAGESLATRD 1911
Cdd:PHA03247 2651 RPRDDPAPGRVSRPRRARRLGraaQASSPPQRPRRRAARPTvgsltsladpPPPPPTPEPAPHALVSATPLPPGPAAARQ 2730
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1912 TEQTEPEQREPTPYPDERSFQYADIYEQMMLTGLGPACPTrePPLGASGDwPPHLSTKEEAAGCNTSAEKETSSPASpqn 1991
Cdd:PHA03247 2731 ASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA--PPAAPAAG-PPRRLTRPAVASLSESRESLPSPWDP--- 2804
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 1992 lqSDTPAfsYASLAGPAVPPRQEPDPgpnvePSITPPAVPPRAPISLSKDLSP--PLNGSTVSCSPDRRTPSPKETGrgh 2069
Cdd:PHA03247 2805 --ADPPA--AVLAPAAALPPAASPAG-----PLPPPTSAQPTAPPPPPGPPPPslPLGGSVAPGGDVRRRPPSRSPA--- 2872
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2070 wddgtndSDLEKGAREQPEKETRSPSPHHPMPMGHSSLWPETEAYSSLSSDSHLGSVRPSLDFPASAfgfsslQPAPPQL 2149
Cdd:PHA03247 2873 -------AKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPP------PPPPPRP 2939
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342546 2150 PSPAEPRSAPCGSLAFSG----DRALALVPGTPTRTRhdeylevTKAPsldSSLPQLPSPSSPGGPLLSN-LPRPASPAL 2224
Cdd:PHA03247 2940 QPPLAPTTDPAGAGEPSGavpqPWLGALVPGRVAVPR-------FRVP---QPAPSREAPASSTPPLTGHsLSRVSSWAS 3009
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 564342546 2225 SEGSSSEATTPVISSVAERFPPglEAAEQSAEGLGSGKESAAHSLWDLTPLSPAP 2279
Cdd:PHA03247 3010 SLALHEETDPPPVSLKQTLWPP--DDTEDSDADSLFDSDSERSDLEALDPLPPEP 3062
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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