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Conserved domains on  [gi|568929251|ref|XP_006503226|]
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dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X8 [Mus musculus]

Protein Classification

glycosyltransferase family protein( domain architecture ID 229536)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Alg6_Alg8 super family cl46505
ALG6, ALG8 glycosyltransferase family; N-linked (asparagine-linked) glycosylation of proteins ...
6-269 2.06e-57

ALG6, ALG8 glycosyltransferase family; N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one. In the human alg6 gene, a C->T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147.


The actual alignment was detected with superfamily member pfam03155:

Pssm-ID: 480845  Cd Length: 477  Bit Score: 191.16  E-value: 2.06e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929251    6 IILLALFIRIACTVLASFLLCWLPFLTErEHALQVVRRLFPVDRGLFEDKVA-NIWCSVNVFLKIKDTLPR--------- 75
Cdd:pfam03155 204 KFNFLRLLKLGLTVLATFALSFGPFLYS-GQLPQVLSRLFPFSRGLFHDYWApNFWCLYNFLDKVLIVLAPrlgllvtrg 282
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929251   76 -----------HIQIAISFCFTLLSLLPACIKLTVRPSCKGFRFTLVSCALSFFLFSFQVHEKSILLVSLPVCLVLTEIP 144
Cdd:pfam03155 283 lvgdtsfavlpQILPKLTLILTLLAQLPSLIKLFLRPSKRLFLLALTLCSLSFFLFSWHVHEKAILLVLLPLSLLALEDP 362
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929251  145 ---FMSTWFLLVSTFSMLPLLLKDELLLPSVVTVMAFVIACGTFFPMLENTSEEQLqlksfavsvrrhlpgFTFLPRIMQ 221
Cdd:pfam03155 363 rdlSLFRWLSNVGTFSLFPLLFKDGLLLIKVVLTLLWNILFGLALRKLARLPFPSL---------------RVFLLDRLE 427
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 568929251  222 CLFLSSVITMVLL-TILSVTLDPPQKLPDLFPVLICFV-SCVNFVFFLVY 269
Cdd:pfam03155 428 LLYLLSLIGMLVLhCLLHLLVPPPARYPFLPLMLTSVYcSFGVFYSFLLY 477
 
Name Accession Description Interval E-value
Alg6_Alg8 pfam03155
ALG6, ALG8 glycosyltransferase family; N-linked (asparagine-linked) glycosylation of proteins ...
6-269 2.06e-57

ALG6, ALG8 glycosyltransferase family; N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one. In the human alg6 gene, a C->T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147.


Pssm-ID: 460831  Cd Length: 477  Bit Score: 191.16  E-value: 2.06e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929251    6 IILLALFIRIACTVLASFLLCWLPFLTErEHALQVVRRLFPVDRGLFEDKVA-NIWCSVNVFLKIKDTLPR--------- 75
Cdd:pfam03155 204 KFNFLRLLKLGLTVLATFALSFGPFLYS-GQLPQVLSRLFPFSRGLFHDYWApNFWCLYNFLDKVLIVLAPrlgllvtrg 282
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929251   76 -----------HIQIAISFCFTLLSLLPACIKLTVRPSCKGFRFTLVSCALSFFLFSFQVHEKSILLVSLPVCLVLTEIP 144
Cdd:pfam03155 283 lvgdtsfavlpQILPKLTLILTLLAQLPSLIKLFLRPSKRLFLLALTLCSLSFFLFSWHVHEKAILLVLLPLSLLALEDP 362
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929251  145 ---FMSTWFLLVSTFSMLPLLLKDELLLPSVVTVMAFVIACGTFFPMLENTSEEQLqlksfavsvrrhlpgFTFLPRIMQ 221
Cdd:pfam03155 363 rdlSLFRWLSNVGTFSLFPLLFKDGLLLIKVVLTLLWNILFGLALRKLARLPFPSL---------------RVFLLDRLE 427
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 568929251  222 CLFLSSVITMVLL-TILSVTLDPPQKLPDLFPVLICFV-SCVNFVFFLVY 269
Cdd:pfam03155 428 LLYLLSLIGMLVLhCLLHLLVPPPARYPFLPLMLTSVYcSFGVFYSFLLY 477
 
Name Accession Description Interval E-value
Alg6_Alg8 pfam03155
ALG6, ALG8 glycosyltransferase family; N-linked (asparagine-linked) glycosylation of proteins ...
6-269 2.06e-57

ALG6, ALG8 glycosyltransferase family; N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one. In the human alg6 gene, a C->T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147.


Pssm-ID: 460831  Cd Length: 477  Bit Score: 191.16  E-value: 2.06e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929251    6 IILLALFIRIACTVLASFLLCWLPFLTErEHALQVVRRLFPVDRGLFEDKVA-NIWCSVNVFLKIKDTLPR--------- 75
Cdd:pfam03155 204 KFNFLRLLKLGLTVLATFALSFGPFLYS-GQLPQVLSRLFPFSRGLFHDYWApNFWCLYNFLDKVLIVLAPrlgllvtrg 282
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929251   76 -----------HIQIAISFCFTLLSLLPACIKLTVRPSCKGFRFTLVSCALSFFLFSFQVHEKSILLVSLPVCLVLTEIP 144
Cdd:pfam03155 283 lvgdtsfavlpQILPKLTLILTLLAQLPSLIKLFLRPSKRLFLLALTLCSLSFFLFSWHVHEKAILLVLLPLSLLALEDP 362
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929251  145 ---FMSTWFLLVSTFSMLPLLLKDELLLPSVVTVMAFVIACGTFFPMLENTSEEQLqlksfavsvrrhlpgFTFLPRIMQ 221
Cdd:pfam03155 363 rdlSLFRWLSNVGTFSLFPLLFKDGLLLIKVVLTLLWNILFGLALRKLARLPFPSL---------------RVFLLDRLE 427
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 568929251  222 CLFLSSVITMVLL-TILSVTLDPPQKLPDLFPVLICFV-SCVNFVFFLVY 269
Cdd:pfam03155 428 LLYLLSLIGMLVLhCLLHLLVPPPARYPFLPLMLTSVYcSFGVFYSFLLY 477
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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