|
Name |
Accession |
Description |
Interval |
E-value |
| ASKHA_NBD_FGGY_GK1-3-like |
cd07792 |
nucleotide-binding domain (NBD) of metazoan glycerol kinase 1-3 (GK1-3) and similar proteins; ... |
11-538 |
0e+00 |
|
nucleotide-binding domain (NBD) of metazoan glycerol kinase 1-3 (GK1-3) and similar proteins; This subfamily contains metazoan glycerol kinases (GKs), coded by X chromosome-linked GK genes, and glycerol kinase (GK)-like proteins, coded by autosomal testis-specific GK-like genes (GK-like genes, GK2 and GK3). Sequence comparison shows that metazoan GKs and GK-like proteins in this family are closely related to the bacterial GKs (EC 2.7.1.30), which catalyze the Mg-ATP dependent phosphorylation of glycerol to yield glycerol 3-phosphate (G3P). The metazoan GKs do have GK enzymatic activity. However, the GK-like metazoan proteins do not exhibit GK activity and their biological functions are not yet clear. Some of them lack important functional residues involved in the binding of ADP and Mg2+, which may result in the loss of GK catalytic function. Others that have conserved catalytic residues have lost their GK activity as well; the reason remains unclear. It has been suggested the conserved catalytic residues might facilitate them performing a distinct function. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466802 [Multi-domain] Cd Length: 499 Bit Score: 985.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 11 PLVGAVDQGTSSTRFLVFNSkTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGQLNIDISNIKAIGV 90
Cdd:cd07792 1 PLVGAIDQGTTSTRFIVFDS-TGELVASHQVEHKQIYPKPGWVEHDPMEILESVYECIEEAVEKLKALGISPSDIKAIGI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 91 SNQRETTVVWDKVTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPGNNNFVKSKTG 170
Cdd:cd07792 80 TNQRETTVVWDKSTGKPLYNAI----------------------------VWLDTRTSDTVEELSAKTPGGKDHFRKKTG 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 171 LPLSTYFSAVKLRWLLDNVKKVQEAVEENRALFGTIDSWLIWSLTGGIHGGVHCTDVTNASRTMLFNIHSLEWDKELCEF 250
Cdd:cd07792 132 LPISTYFSAVKLRWLLDNVPEVKKAVDDGRLLFGTVDSWLIWNLTGGKNGGVHVTDVTNASRTMLMNLRTLQWDPELCEF 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 251 FGIPMEILPNVRSSSEIYGLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGHKCVFSEHGLLT 330
Cdd:cd07792 212 FGIPMSILPEIRSSSEVYGKIASGPLAGVPISGCLGDQQAALVGQGCFKPGEAKNTYGTGCFLLYNTGEEPVFSKHGLLT 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 331 TVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKSSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARGIICG 410
Cdd:cd07792 292 TVAYKLGPDAPPVYALEGSIAIAGAAVQWLRDNLGIISSASEVETLAASVPDTGGVYFVPAFSGLFAPYWRPDARGTIVG 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 411 LTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTALGAAMA 490
Cdd:cd07792 372 LTQFTTKAHIARAALEAVCFQTREILDAMNKDSGIPLTSLRVDGGMTKNNLLMQIQADILGIPVERPSMVETTALGAAIA 451
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 569009727 491 AGAAEGVGVWSLEPEDLSAVTMERFEPQINAEESEIRYSTWKKAVMKS 538
Cdd:cd07792 452 AGLAVGVWKSLDELKSLNEGGRTVFEPQISEEERERRYKRWKKAVERS 499
|
|
| glycerol_kin |
TIGR01311 |
glycerol kinase; This model describes glycerol kinase, a member of the FGGY family of ... |
11-541 |
0e+00 |
|
glycerol kinase; This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases. [Energy metabolism, Other]
Pssm-ID: 273549 [Multi-domain] Cd Length: 493 Bit Score: 818.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 11 PLVGAVDQGTSSTRFLVFNsKTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGqlnIDISNIKAIGV 90
Cdd:TIGR01311 1 PYILAIDQGTTSSRAIVFD-KDGNIVAIHQKEFTQIFPKPGWVEHDPMEIWESVLSCIAEALAKAG---IKPDDIAAIGI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 91 SNQRETTVVWDKVTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPGNnnFVKSKTG 170
Cdd:TIGR01311 77 TNQRETTVVWDKATGKPLYNAI----------------------------VWQDRRTASICEELKAEGYGE--FIREKTG 126
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 171 LPLSTYFSAVKLRWLLDNVKKVQEAVEENRALFGTIDSWLIWSLTGGihgGVHCTDVTNASRTMLFNIHSLEWDKELCEF 250
Cdd:TIGR01311 127 LPLDPYFSATKLRWLLDNVPGVREAAERGELLFGTIDTWLIWNLTGG---KVHVTDVTNASRTMLFNIHTLDWDDELLEL 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 251 FGIPMEILPNVRSSSEIYGLMKAGAL-EGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGHKCVFSEHGLL 329
Cdd:TIGR01311 204 FGIPREILPEVRSSSEVYGYTDPGLLgAEIPITGVLGDQQAALFGQACFKPGQAKNTYGTGCFLLMNTGEKPVISKHGLL 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 330 TTVAYKLGRDKPVYyALEGSVAIAGAVIRWLRDNLGIIKSSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARGIIC 409
Cdd:TIGR01311 284 TTVAYQLGGKKPVY-ALEGSVFVAGAAVQWLRDNLKLIKHAAESEALARSVEDNGGVYFVPAFTGLGAPYWDPDARGAIF 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 410 GLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTALGAAM 489
Cdd:TIGR01311 363 GLTRGTTKAHIARAALEAIAFQTRDVLEAMEKDAGVEITKLRVDGGMTNNNLLMQFQADILGVPVVRPKVTETTALGAAY 442
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 569009727 490 AAGAAEGVGVWSLEPEDLSAVTmERFEPQINAEESEIRYSTWKKAVMKSIGW 541
Cdd:TIGR01311 443 AAGLAVGYWKSLEEIEALWRVE-KTFEPEMDEEEREARYAGWKEAVKRSLGW 493
|
|
| ASKHA_NBD_FGGY_GK |
cd07769 |
nucleotide-binding domain (NBD) of glycerol kinase (GK) and similar proteins; GK (EC 2.7.1.30), ... |
13-535 |
0e+00 |
|
nucleotide-binding domain (NBD) of glycerol kinase (GK) and similar proteins; GK (EC 2.7.1.30), also called ATP:glycerol 3-phosphotransferase, or glycerokinase, is a key enzyme in the regulation of glycerol uptake and metabolism. It catalyzes the Mg-ATP-dependent phosphorylation of glycerol to yield sn-glycerol 3-phosphate. It also catalyzes the phosphorylation of dihydroxyacetone, L-glyceraldehyde and D-glyceraldehyde. The subfamily includes GKs and GK-like proteins from all three kingdoms of living organisms. Metazoan GKs, coded by X chromosome-linked GK genes, and GK-like proteins, coded by autosomal testis-specific GK-like genes GK2, GK3 and Gykl1 (in mouse) are closely related to the bacterial GKs. The metazoan GKs do have GK enzymatic activity. However, the GK-like metazoan proteins do not exhibit GK activity and their biological functions are not yet clear. Some of them lack important functional residues involved in the binding of ADP and Mg2+, which may result in the loss of GK catalytic function. Others that have conserved catalytic residues have lost their GK activity as well; the reason remains unclear. It has been suggested the conserved catalytic residues might facilitate them performing a distinct function. Under different conditions, GKs from different species may exist in different oligomeric states. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466789 [Multi-domain] Cd Length: 486 Bit Score: 746.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 13 VGAVDQGTSSTRFLVFNSKtAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGqlnIDISNIKAIGVSN 92
Cdd:cd07769 2 ILAIDQGTTSTRAILFDED-GNIVASAQKEHEQIYPQPGWVEHDPEEIWENTLEVIREALAKAG---ISASDIAAIGITN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 93 QRETTVVWDKVTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRipGNNNFVKSKTGLP 172
Cdd:cd07769 78 QRETTVVWDKKTGKPLYNAI----------------------------VWQDRRTADICEELKAK--GLEERIREKTGLP 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 173 LSTYFSAVKLRWLLDNVKKVQEAVEENRALFGTIDSWLIWSLTGGihgGVHCTDVTNASRTMLFNIHSLEWDKELCEFFG 252
Cdd:cd07769 128 LDPYFSATKIKWILDNVPGARERAERGELLFGTIDTWLIWKLTGG---KVHVTDVTNASRTMLFNIHTLEWDDELLELFG 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 253 IPMEILPNVRSSSEIYGLMKAGAL-EGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGHKCVFSEHGLLTT 331
Cdd:cd07769 205 IPRSMLPEVRPSSEVFGYTDPEGLgAGIPIAGILGDQQAALFGQGCFEPGMAKNTYGTGCFLLMNTGEKPVPSKNGLLTT 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 332 VAYKLgrDKPVYYALEGSVAIAGAVIRWLRDNLGIIKSSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARGIICGL 411
Cdd:cd07769 285 IAWQI--GGKVTYALEGSIFIAGAAIQWLRDNLGLIEDAAETEELARSVEDNGGVYFVPAFSGLGAPYWDPDARGAIVGL 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 412 TQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTalgaamaa 491
Cdd:cd07769 363 TRGTTKAHIVRAALESIAYQTRDVLEAMEKDSGIKLKELRVDGGATANNFLMQFQADILGVPVVRPKVAETTalgaayl- 441
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 569009727 492 gaaegvgVWSLEPEDLSAVTMER-FEPQINAEESEIRYSTWKKAV 535
Cdd:cd07769 442 -aglavgFWKDLDELASLWQVDKrFEPSMDEEERERLYRGWKKAV 485
|
|
| GlpK |
COG0554 |
Glycerol kinase [Energy production and conversion]; |
13-542 |
0e+00 |
|
Glycerol kinase [Energy production and conversion];
Pssm-ID: 440320 [Multi-domain] Cd Length: 496 Bit Score: 742.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 13 VGAVDQGTSSTRFLVFNSKtAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGqlnIDISNIKAIGVSN 92
Cdd:COG0554 5 ILAIDQGTTSTRAILFDRD-GNIVAVAQREFTQIYPQPGWVEHDPEEIWESVLAVIREALAKAG---ISAEDIAAIGITN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 93 QRETTVVWDKVTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRipGNNNFVKSKTGLP 172
Cdd:COG0554 81 QRETTVVWDRKTGKPLYNAI----------------------------VWQDRRTADICEELKAD--GLEDLIREKTGLV 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 173 LSTYFSAVKLRWLLDNVKKVQEAVEENRALFGTIDSWLIWSLTGGihgGVHCTDVTNASRTMLFNIHSLEWDKELCEFFG 252
Cdd:COG0554 131 LDPYFSATKIKWILDNVPGARERAEAGELLFGTIDSWLIWKLTGG---KVHVTDVTNASRTMLFNIHTLDWDDELLELFG 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 253 IPMEILPNVRSSSEIYGLMKAGAL-EGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGHKCVFSEHGLLTT 331
Cdd:COG0554 208 IPRSMLPEVRPSSEVFGETDPDLFgAEIPIAGIAGDQQAALFGQACFEPGMAKNTYGTGCFLLMNTGDEPVRSKNGLLTT 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 332 VAYKLGrDKPVYyALEGSVAIAGAVIRWLRDNLGIIKSSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARGIICGL 411
Cdd:COG0554 288 IAWGLG-GKVTY-ALEGSIFVAGAAVQWLRDGLGLIDSAAESEALARSVEDNGGVYFVPAFTGLGAPYWDPDARGAIFGL 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 412 TQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTalgaamaa 491
Cdd:COG0554 366 TRGTTRAHIARAALESIAYQTRDVLDAMEADSGIPLKELRVDGGASANDLLMQFQADILGVPVERPKVTETTalgaayl- 444
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 569009727 492 gaaegvgVWSlEPEDLSAV--TMERFEPQINAEESEIRYSTWKKAVMKSIGWV 542
Cdd:COG0554 445 -aglavgFWK-SLEELAALwkVDRRFEPQMDEEERERLYAGWKKAVERTLGWA 495
|
|
| PTZ00294 |
PTZ00294 |
glycerol kinase-like protein; Provisional |
11-542 |
0e+00 |
|
glycerol kinase-like protein; Provisional
Pssm-ID: 240348 [Multi-domain] Cd Length: 504 Bit Score: 714.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 11 PLVGAVDQGTSSTRFLVFNSKtAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGQLNIDISnIKAIGV 90
Cdd:PTZ00294 2 KYIGSIDQGTTSTRFIIFDEK-GNVVSSHQIPHEQITPHPGWLEHDPEEILRNVYKCMNEAIKKLREKGPSFK-IKAIGI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 91 SNQRETTVVWDKVTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPGNNNFVKsKTG 170
Cdd:PTZ00294 80 TNQRETVVAWDKVTGKPLYNAI----------------------------VWLDTRTYDIVNELTKKYGGSNFFQK-ITG 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 171 LPLSTYFSAVKLRWLLDNVKKVQEAVEENRALFGTIDSWLIWSLTGGihgGVHCTDVTNASRTMLFNIHSLEWDKELCEF 250
Cdd:PTZ00294 131 LPISTYFSAFKIRWMLENVPAVKDAVKEGTLLFGTIDTWLIWNLTGG---KSHVTDVTNASRTFLMNIKTLKWDEELLNK 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 251 FGIPMEILPNVRSSSEIYGLMK---AGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGHKCVFSEHG 327
Cdd:PTZ00294 208 FGIPKETLPEIKSSSENFGTISgeaVPLLEGVPITGCIGDQQAALIGHGCFEKGDAKNTYGTGCFLLMNTGTEIVFSKHG 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 328 LLTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKSSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARGI 407
Cdd:PTZ00294 288 LLTTVCYQLGPNGPTVYALEGSIAVAGAGVEWLRDNMGLISHPSEIEKLARSVKDTGGVVFVPAFSGLFAPYWRPDARGT 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 408 ICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTalGA 487
Cdd:PTZ00294 368 IVGMTLKTTRAHIVRAALEAIALQTNDVIESMEKDAGIELNSLRVDGGLTKNKLLMQFQADILGKDIVVPEMAETT--AL 445
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 569009727 488 AMAAGAAEGVGVW-SLEP-EDLSAVTMERFEPQINAEESEIRYSTWKKAVMKSIGWV 542
Cdd:PTZ00294 446 GAALLAGLAVGVWkSLEEvKKLIRRSNSTFSPQMSAEERKAIYKEWNKAVERSLKWA 502
|
|
| PLN02295 |
PLN02295 |
glycerol kinase |
12-542 |
0e+00 |
|
glycerol kinase
Pssm-ID: 215166 [Multi-domain] Cd Length: 512 Bit Score: 697.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 12 LVGAVDQGTSSTRFLVFNsKTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGQ--LNIDiSNIKAIG 89
Cdd:PLN02295 1 FVGAIDQGTTSTRFIIYD-RDARPVASHQVEFTQIYPQAGWVEHDPMEILESVLTCIAKALEKAAAkgHNVD-SGLKAIG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 90 VSNQRETTVVWDKVTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPGNNNFVKSKT 169
Cdd:PLN02295 79 ITNQRETTVAWSKSTGRPLYNAI----------------------------VWMDSRTSSICRRLEKELSGGRKHFVETC 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 170 GLPLSTYFSAVKLRWLLDNVKKVQEAVEENRALFGTIDSWLIWSLTGGIHGGVHCTDVTNASRTMLFNIHSLEWDKELCE 249
Cdd:PLN02295 131 GLPISTYFSATKLLWLLENVDAVKEAVKSGDALFGTIDSWLIWNLTGGASGGVHVTDVTNASRTMLMNLKTLDWDKPTLE 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 250 FFGIPMEILPNVRSSSEIYGLMKAG-ALEGVPISGCLGDQSAALVGQMCfQDGQAKNTYGTGCFLLCNTGHKCVFSEHGL 328
Cdd:PLN02295 211 ALGIPAEILPKIVSNSEVIGTIAKGwPLAGVPIAGCLGDQHAAMLGQRC-RPGEAKSTYGTGCFILLNTGEEVVPSKHGL 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 329 LTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKSSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARGII 408
Cdd:PLN02295 290 LTTVAYKLGPDAPTNYALEGSVAIAGAAVQWLRDNLGIIKSASEIEALAATVDDTGGVYFVPAFSGLFAPRWRDDARGVC 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 409 CGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSH-----LQVDGGMTSNKILMQLQADILYIPVVKPSMPETT 483
Cdd:PLN02295 370 VGITRFTNKAHIARAVLESMCFQVKDVLDAMRKDAGEEKSHkglflLRVDGGATANNLLMQIQADLLGSPVVRPADIETT 449
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 569009727 484 alGAAMAAGAAEGVGVWSlePEDLSAVTMER----FEPQINAEESEIRYSTWKKAVMKSIGWV 542
Cdd:PLN02295 450 --ALGAAYAAGLAVGLWT--EEEIFASEKWKntttFRPKLDEEERAKRYASWCKAVERSFDLA 508
|
|
| glpK |
PRK00047 |
glycerol kinase GlpK; |
13-542 |
0e+00 |
|
glycerol kinase GlpK;
Pssm-ID: 234594 [Multi-domain] Cd Length: 498 Bit Score: 685.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 13 VGAVDQGTSSTRFLVFNsKTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEktcEKLGQLNIDISNIKAIGVSN 92
Cdd:PRK00047 7 ILALDQGTTSSRAIIFD-HDGNIVSVAQKEFTQIFPQPGWVEHDPNEIWASQLSVIA---EALAKAGISPDQIAAIGITN 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 93 QRETTVVWDKVTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRipGNNNFVKSKTGLP 172
Cdd:PRK00047 83 QRETTVVWDKETGRPIYNAI----------------------------VWQDRRTADICEELKRD--GYEDYIREKTGLV 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 173 LSTYFSAVKLRWLLDNVKKVQEAVEENRALFGTIDSWLIWSLTGGihgGVHCTDVTNASRTMLFNIHSLEWDKELCEFFG 252
Cdd:PRK00047 133 IDPYFSGTKIKWILDNVEGARERAEKGELLFGTIDTWLVWKLTGG---KVHVTDYTNASRTMLFNIHTLDWDDELLELLD 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 253 IPMEILPNVRSSSEIYGLMKAG--ALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGHKCVFSEHGLLT 330
Cdd:PRK00047 210 IPRSMLPEVRPSSEVYGKTNPYgfFGGEVPIAGIAGDQQAALFGQLCFEPGMAKNTYGTGCFMLMNTGEKAVKSENGLLT 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 331 TVAYKLGrDKPVYyALEGSVAIAGAVIRWLRDNLGIIKSSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARGIICG 410
Cdd:PRK00047 290 TIAWGID-GKVVY-ALEGSIFVAGSAIQWLRDGLKIISDASDSEALARKVEDNDGVYVVPAFTGLGAPYWDSDARGAIFG 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 411 LTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTalgaama 490
Cdd:PRK00047 368 LTRGTTKEHIIRATLESIAYQTRDVLDAMQADSGIRLKELRVDGGAVANNFLMQFQADILGVPVERPVVAETT------- 440
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 569009727 491 agaaegvgvwSL--------------EPEDLSAVTME--RFEPQINAEESEIRYSTWKKAVMKSIGWV 542
Cdd:PRK00047 441 ----------ALgaaylaglavgfwkDLDELKEQWKIdrRFEPQMDEEEREKLYAGWKKAVKRTLAWA 498
|
|
| FGGY_EcGK_like |
cd07786 |
Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate ... |
15-535 |
0e+00 |
|
Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases; This subgroup is composed of mostly bacterial and archaeal glycerol kinases (GK), including the well characterized proteins from Escherichia coli (EcGK), Thermococcus kodakaraensis (TkGK), and Enterococcus casseliflavus (EnGK). GKs contain two large domains separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The high affinity ATP binding site of EcGK is created only by a substrate-induced conformational change, which is initiated by protein-protein interactions through complex formation with enzyme IIAGlc (also known as IIIGlc), the glucose-specific phosphocarrier protein of the phosphotransferase system (PTS). EcGK exists in a dimer-tetramer equilibrium. IIAGlc binds to both EcGK dimer and tetramer, and inhibits the uptake and subsequent metabolism of glycerol and maltose. Another well-known allosteric regulator of EcGK is fructose 1,6-bisphosphate (FBP), which binds to the EcGK tetramer and plays an essential role in the stabilization of the inactive tetrameric form. EcGK requires Mg2+ for its enzymatic activity. Members in this subgroup belong to the FGGY family of carbohydrate kinases
Pssm-ID: 198361 [Multi-domain] Cd Length: 486 Bit Score: 679.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTRFLVFNsKTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEktcEKLGQLNIDISNIKAIGVSNQR 94
Cdd:cd07786 4 AIDQGTTSSRAILFD-HDGNIVAVAQREFTQIYPKPGWVEHDPEEIWESQLAVAR---EALAKAGIRASDIAAIGITNQR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 95 ETTVVWDKVTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRipGNNNFVKSKTGLPLS 174
Cdd:cd07786 80 ETTVVWDRETGKPVYNAI----------------------------VWQDRRTADICEELKAE--GHEEMIREKTGLVLD 129
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 175 TYFSAVKLRWLLDNVKKVQEAVEENRALFGTIDSWLIWSLTGGihgGVHCTDVTNASRTMLFNIHSLEWDKELCEFFGIP 254
Cdd:cd07786 130 PYFSATKIRWILDNVPGARERAERGELAFGTIDSWLIWKLTGG---KVHATDVTNASRTMLFNIHTLEWDDELLELFGIP 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 255 MEILPNVRSSSEIYGLMKAGAL-EGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGHKCVFSEHGLLTTVA 333
Cdd:cd07786 207 ASMLPEVKPSSEVFGYTDPDLLgAEIPIAGIAGDQQAALFGQACFEPGMAKNTYGTGCFMLMNTGEKPVRSKNGLLTTIA 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 334 YKLGrdKPVYYALEGSVAIAGAVIRWLRDNLGIIKSSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARGIICGLTQ 413
Cdd:cd07786 287 WQLG--GKVTYALEGSIFIAGAAVQWLRDGLGLIESAAETEALARSVPDNGGVYFVPAFTGLGAPYWDPDARGAIFGLTR 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 414 FTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTA--------L 485
Cdd:cd07786 365 GTTRAHIARAALESIAYQTRDLLEAMEADSGIPLKELRVDGGASANDFLMQFQADILGVPVERPKVTETTAlgaaylagL 444
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 569009727 486 GAAMAAGAAEGVGVWSLEpedlsavtmERFEPQINAEESEIRYSTWKKAV 535
Cdd:cd07786 445 AVGLWKSLDELAKLWQVD---------RRFEPSMSEEEREALYAGWKKAV 485
|
|
| ASKHA_NBD_FGGY_GK5-like |
cd07793 |
nucleotide-binding domain (NBD) of metazoan glycerol kinase 5 (GK5) and similar proteins; The ... |
15-535 |
2.79e-145 |
|
nucleotide-binding domain (NBD) of metazoan glycerol kinase 5 (GK5) and similar proteins; The subfamily corresponds to a group of metazoan putative glycerol kinases (GK), which may be coded by the GK-like gene, GK5. Sequence comparison shows members of this group are homologs of bacterial GKs, and they retain all functionally important residues. However, GK-like proteins in this family do not have detectable GK activity. The reason remains unclear. It has been suggested that the conserved catalytic residues might facilitate them performing a distinct function. GK5 is a skin-specific kinase expressed predominantly in sebaceous glands. It can form a complex with the sterol regulatory element-binding proteins (SREBPs) through their C-terminal regulatory domains, inhibiting SREBP processing and activation. GK5 also promotes gefitinib resistance by inhibiting apoptosis and cell cycle arrest. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466803 [Multi-domain] Cd Length: 501 Bit Score: 428.90 E-value: 2.79e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTRFLVFNSKtAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGqlnIDISNIKAIGVSNQR 94
Cdd:cd07793 4 AVDVGTTNIRCHIFDKK-GKIIGSSSEKVEVLYPEPGWVEIDPEELWQQFVKVIKEALKNAG---LTPEDIAAIGISTQR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 95 ETTVVWDKVTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSK---------------RIP 159
Cdd:cd07793 80 NTFLTWDKKTGKPLHNFI----------------------------TWQDLRAAELCESWNRslllkalrggskflhFLT 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 160 GNNNFVKSKTgLPLSTYFSAVKLRWLLDNVKKVQEAVEENRALFGTIDSWLIWSLTGGihgGVHCTDVTNASRTMLFNIH 239
Cdd:cd07793 132 RNKRFLAASV-LKFSTAHVSIRLLWILQNNPELKEAAEKGELLFGTIDTWLLWKLTGG---KVHATDYSNASATGLFDPF 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 240 SLEWDKELCEFFGIPMEILPNVRSSSEIYGLMKAGAL-EGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTG 318
Cdd:cd07793 208 TLEWSPILLSLFGIPSSILPEVKDTSGDFGSTDPSIFgAEIPITAVVADQQAALFGECCFDKGDVKITMGTGTFIDINTG 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 319 HKCVFSEHGLLTTVAYKLGrDKPVYyALEGSVAIAGAVIRWLRDNLGIiKSSEEIEKLAKEVGTSYGCYFVPAFSGLYAP 398
Cdd:cd07793 288 SKPHASVKGLYPLVGWKIG-GEITY-LAEGNASDTGTVIDWAKSIGLF-DDPSETEDIAESVEDTNGVYFVPAFSGLQAP 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 399 YWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPS 478
Cdd:cd07793 365 YNDPTACAGFIGLTPSTTKAHLVRAILESIAFRVKQLLETMEKETSIKISSIRVDGGVSNNDFILQLIADLLGKPVERPK 444
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 569009727 479 MPETTalGAAMAAGAAEGVGVWSlEPEDLSAV--TMERFEPQINAEESEIRYSTWKKAV 535
Cdd:cd07793 445 NTEMS--ALGAAFLAGLASGIWK-SKEELKKLrkIEKIFEPKMDNEKREELYKNWKKAV 500
|
|
| FGGY_N |
pfam00370 |
FGGY family of carbohydrate kinases, N-terminal domain; This domain adopts a ribonuclease ... |
12-294 |
1.06e-103 |
|
FGGY family of carbohydrate kinases, N-terminal domain; This domain adopts a ribonuclease H-like fold and is structurally related to the C-terminal domain.
Pssm-ID: 395295 [Multi-domain] Cd Length: 245 Bit Score: 312.73 E-value: 1.06e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 12 LVGAVDQGTSSTRFLVFNsKTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEklgQLNIDISNIKAIGVS 91
Cdd:pfam00370 1 YYLGIDCGTTSTKAILFN-EQGKIIAVAQLENPQITPHPGWAEQDPDEIWQAVAQCIAKTLS---QLGISLKQIKGIGIS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 92 NQRETTVVWDKVTgEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKriPGNNNFVKSKTGL 171
Cdd:pfam00370 77 NQGHGTVLLDKND-KPLYNAI----------------------------LWKDRRTAEIVENLKE--EGNNQKLYEITGL 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 172 PLSTYFSAVKLRWLLDNVKKVQEAVEenraLFGTIDSWLIWSLTGgihggVHCTDVTNASRTMLFNIHSLEWDKELCEFF 251
Cdd:pfam00370 126 PIWPGFTLSKLRWIKENEPEVFEKIH----KFLTIHDYLRWRLTG-----VFVTDHTNASRSMMFNIHKLDWDPELLAAL 196
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 569009727 252 GIPMEILPNVRSSSEIYGLMKA------GALEGVPISGCLGDQSAALVG 294
Cdd:pfam00370 197 GIPRDHLPPLVESSEIYGELNPelaamwGLDEGVPVVGGGGDQQAAAFG 245
|
|
| XylB |
COG1070 |
Sugar (pentulose or hexulose) kinase [Carbohydrate transport and metabolism]; Sugar (pentulose ... |
6-483 |
9.65e-92 |
|
Sugar (pentulose or hexulose) kinase [Carbohydrate transport and metabolism]; Sugar (pentulose or hexulose) kinase is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 440688 [Multi-domain] Cd Length: 494 Bit Score: 290.97 E-value: 9.65e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 6 KAVLGplvgaVDQGTSSTRFLVFNSkTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGqlnIDISNI 85
Cdd:COG1070 1 KYVLG-----IDIGTTSVKAVLFDA-DGEVVASASAEYPLSSPHPGWAEQDPEDWWEAVVEAIRELLAKAG---VDPEEI 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 86 KAIGVSNQRETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPGNNNFv 165
Cdd:COG1070 72 AAIGVSGQMHGLVLLDA-DGEPLRPAI----------------------------LWNDTRAAAEAAELREELGEEALY- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 166 kSKTGLPLSTYFSAVKLRWLLDNvkkvQEAVEENRALFGTIDSWLIWSLTGgihggVHCTDVTNASRTMLFNIHSLEWDK 245
Cdd:COG1070 122 -EITGNPLHPGFTAPKLLWLKEN----EPEIFARIAKVLLPKDYLRYRLTG-----EFVTDYSDASGTGLLDVRTRDWSD 191
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 246 ELCEFFGIPMEILPNVRSSSEIYGLMKA------GALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGH 319
Cdd:COG1070 192 ELLEALGIDRELLPELVPPGEVAGTLTAeaaaetGLPAGTPVVAGAGDNAAAALGAGAVEPGDAAVSLGTSGVVFVVSDK 271
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 320 KcVFSEHGLLTTVAYKL-GRdkpvyYALEGSVAIAGAVIRWLRDNLGIIKSS--EEIEKLAKEVGT-SYGCYFVPAFSGL 395
Cdd:COG1070 272 P-LPDPEGRVHTFCHAVpGR-----WLPMGATNNGGSALRWFRDLFADGELDdyEELNALAAEVPPgADGLLFLPYLSGE 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 396 YAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMnRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVV 475
Cdd:COG1070 346 RTPHWDPNARGAFFGLTLSHTRAHLARAVLEGVAFALRDGLEAL-EEAGVKIDRIRATGGGARSPLWRQILADVLGRPVE 424
|
....*...
gi 569009727 476 KPSMPETT 483
Cdd:COG1070 425 VPEAEEGG 432
|
|
| ASKHA_NBD_FGGY |
cd00366 |
nucleotide-binding domain (NBD) of the FGGY family of carbohydrate kinases; This family is ... |
15-483 |
6.49e-87 |
|
nucleotide-binding domain (NBD) of the FGGY family of carbohydrate kinases; This family is predominantly composed of glycerol kinase (GK) and similar carbohydrate kinases including rhamnulokinase (RhuK), xylulokinase (XK), gluconokinase (GntK), ribulokinase (RBK), and fuculokinase (FK). These enzymes catalyze the transfer of a phosphate group, usually from ATP, to their carbohydrate substrates. The monomer of FGGY proteins contains two large domains, which are separated by a deep cleft that forms the active site. One domain is primarily involved in sugar substrate binding, and the other is mainly responsible for ATP binding. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Substrate-induced conformational changes and a divalent cation may be required for the catalytic activity. The FGGY family belongs to the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily, all members of which share a common characteristic five-stranded beta sheet occurring in both the N- and C-terminal domains.
Pssm-ID: 466787 [Multi-domain] Cd Length: 392 Bit Score: 274.83 E-value: 6.49e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTRFLVFNSkTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGqlnIDISNIKAIGVSNQR 94
Cdd:cd00366 4 GIDIGTTSVKAALFDE-DGNLVASASREYPLIYPQPGWAEQDPEDWWQAVVEAIREVLAKAG---IDPSDIAAIGISGQM 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 95 ETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDlrtqstvenlskripgnnnfvksktglpls 174
Cdd:cd00366 80 PGVVLVDA-DGNPLRPAI----------------------------IWLD------------------------------ 100
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 175 tyfsavklrwlldnvkkvqeaveeNRALFGTIDSWLIWSLTGgihggVHCTDVTNASRTMLFNIHSLEWDKELCEFFGIP 254
Cdd:cd00366 101 ------------------------RRAKFLQPNDYIVFRLTG-----EFAIDYSNASGTGLYDIKTGDWSEELLDALGIP 151
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 255 MEILPNVRSSSEIYG-LMKAGAL-----EGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGhKCVFSEHGL 328
Cdd:cd00366 152 REKLPPIVESGEVVGrVTPEAAEetglpAGTPVVAGGGDTAAAALGAGVVEPGDAVDSTGTSSVLSVCTD-EPVPPDPRL 230
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 329 LTTVAYKLGRdkpvyYALEGSVAIAGAVIRWLRDNLGIIKSSEE----IEKLAKEVGT-SYGCYFVPAFSGLYAPYWEPS 403
Cdd:cd00366 231 LNRCHVVPGL-----WLLEGAINTGGASLRWFRDEFGEEEDSDAeyegLDELAAEVPPgSDGLIFLPYLSGERSPIWDPA 305
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 404 ARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMnRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPETT 483
Cdd:cd00366 306 ARGVFFGLTLSHTRAHLIRAVLEGVAYALRDNLEIL-EELGVKIKEIRVTGGGAKSRLWNQIKADVLGVPVVVPEVAEGA 384
|
|
| ASKHA_NBD_FGGY_YgcE-like |
cd07779 |
nucleotide-binding domain (NBD) of Escherichia coli sugar kinase YgcE and similar proteins; ... |
15-483 |
7.34e-86 |
|
nucleotide-binding domain (NBD) of Escherichia coli sugar kinase YgcE and similar proteins; This subfamily contains a group of uncharacterized proteins with similarity to Escherichia coli sugar kinase YgcE. They belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466798 [Multi-domain] Cd Length: 433 Bit Score: 273.63 E-value: 7.34e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTRFLVFNsKTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGqlnIDISNIKAIGVSNQR 94
Cdd:cd07779 4 GIDVGTTSTRAIIFD-LDGNIVASGYREYPPYYPEPGWVEQDPDDWWDALCEALKEAVAKAG---VDPEDIAAIGLTSQR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 95 ETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTqstvenlskripgnnnfvksktglpls 174
Cdd:cd07779 80 STFVPVDE-DGRPLRPAI----------------------------SWQDKRT--------------------------- 103
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 175 tyfsavklrwlldnvkkvqeaveenrALFGTIDSWLIWSLTggihgGVHCTDVTNASRTMLFNIHSLEWDKELCEFFGIP 254
Cdd:cd07779 104 --------------------------AKFLTVQDYLLYRLT-----GEFVTDTTSASRTGLPDIRTRDWSDDLLDAFGID 152
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 255 MEILPNVRSSSEIYGLMKA------GALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTgHKCVFSEHGL 328
Cdd:cd07779 153 RDKLPELVPPGTVIGTLTKeaaeetGLPEGTPVVAGGGDQQCAALGAGVLEPGTASLSLGTAAVVIAVS-DKPVEDPERR 231
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 329 LTTVAYKLgrdkPVYYALEGSVAIAGAVIRWLRDNLG---------IIKSSEEIEKLAKEVGT-SYGCYFVPAFSGLYAP 398
Cdd:cd07779 232 IPCNPSAV----PGKWVLEGSINTGGSAVRWFRDEFGqdevaekelGVSPYELLNEEAAKSPPgSDGLLFLPYLAGAGTP 307
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 399 YWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMnRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPS 478
Cdd:cd07779 308 YWNPEARGAFIGLTLSHTRAHLARAILEGIAFELRDNLEAM-EKAGVPIEEIRVSGGGSKSDLWNQIIADVFGRPVERPE 386
|
....*
gi 569009727 479 MPETT 483
Cdd:cd07779 387 TSEAT 391
|
|
| ASKHA_NBD_FGGY_FK |
cd07773 |
nucleotide-binding domain (NBD) of L-fuculokinase (FK) and similar proteins; FK (EC 2.7.1.51), ... |
12-483 |
6.05e-77 |
|
nucleotide-binding domain (NBD) of L-fuculokinase (FK) and similar proteins; FK (EC 2.7.1.51), also called L-fuculose kinase, catalyzes the ATP-dependent phosphorylation of L-fuculose to produce L-fuculose-1-phosphate and ADP. It can also phosphorylate, with lower efficiency, D-ribulose, D-xylulose and D-fructose. The presence of Mg2+ or Mn2+ is required for enzymatic activity. FKs belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466793 [Multi-domain] Cd Length: 443 Bit Score: 250.58 E-value: 6.05e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 12 LVGaVDQGTSSTRFLVFNsKTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGQlnidiSNIKAIGVS 91
Cdd:cd07773 2 LLG-IDIGTTNVKAVLFD-EDGRILASASRETPLIHPGPGWAELDPEELWEAVKEAIREAAAQAGP-----DPIAAISVS 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 92 NQRETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPGNNNFvkSKTGL 171
Cdd:cd07773 75 SQGESGVPVDR-DGEPLGPAI----------------------------VWFDPRGKEEAEELAERIGAEELY--RITGL 123
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 172 PLSTYFSAVKLRWLLDNVKKVQEAVeenrALFGTIDSWLIWSLTGgihggVHCTDVTNASRTMLFNIHSLEWDKELCEFF 251
Cdd:cd07773 124 PPSPMYSLAKLLWLREHEPEIFAKA----AKWLSVADYIAYRLTG-----EPVTDYSLASRTMLFDIRKRTWSEELLEAA 194
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 252 GIPMEILPNVRSSSEIYGLMKAGALE------GVPIsgCLG--DQSAALVGQMCFQDGQAKNTYGTG-CFLLC-NTGHKC 321
Cdd:cd07773 195 GIDASLLPELVPSGTVIGTVTPEAAEelglpaGTPV--VVGghDHLCAALGAGVIEPGDVLDSTGTAeALLAVvDEPPLD 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 322 VFSEHGLLTTVAYKLGRdkpvYYALEGSVAiAGAVIRWLRDNLGI--IKSSEEIEKLAKEVGTSYGCYFVPAFSGLYAPY 399
Cdd:cd07773 273 EMLAEGGLSYGHHVPGG----YYYLAGSLP-GGALLEWFRDLFGGdeSDLAAADELAEAAPPGPTGLLFLPHLSGSGTPD 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 400 WEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMnRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSM 479
Cdd:cd07773 348 FDPDARGAFLGLTLGTTRADLLRAILEGLAFELRLNLEAL-EKAGIPIDEIRAVGGGARSPLWLQLKADILGRPIEVPEV 426
|
....
gi 569009727 480 PETT 483
Cdd:cd07773 427 PEAT 430
|
|
| ASKHA_NBD_FGGY_EcXK-like |
cd07808 |
nucleotide-binding domain (NBD) of Escherichia coli xylulose kinase (EcXK) and similar ... |
8-483 |
1.06e-74 |
|
nucleotide-binding domain (NBD) of Escherichia coli xylulose kinase (EcXK) and similar proteins; The subfamily contains a group of uncharacterized proteins with similarity to Escherichia coli xylulose kinase (EcXK). XK (EC 2.7.1.17), also called xylulokinase or D-xylulose kinase, catalyze the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P), a molecule that may play an important role in the regulation of glucose metabolism and lipogenesis. EcXK, also known as 1-deoxy-D-xylulokinase, can also catalyze the phosphorylation of 1-deoxy-D-xylulose to 1-deoxy-D-xylulose 5-phosphate, with lower efficiency. It can also use D-ribulose, xylitol and D-arabitol, but D-xylulose is preferred over the other substrates. EcXK has a weak substrate-independent Mg-ATP-hydrolyzing activity. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466808 [Multi-domain] Cd Length: 482 Bit Score: 245.91 E-value: 1.06e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 8 VLGplvgaVDQGTSSTRFLVFNSKtAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTcekLGQLNIDISNIKA 87
Cdd:cd07808 2 LLG-----IDLGTSSVKAVLVDED-GRVLASASAEYPTSSPKPGWAEQDPEDWWQATKEALREL---LAKAGISPSDIAA 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 88 IGVSNQRETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPgnnNFVKS 167
Cdd:cd07808 73 IGLTGQMHGLVLLDK-NGRPLRPAI----------------------------LWNDQRSAAECEELEARLG---DEILI 120
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 168 KTGLPLSTYFSAVKLRWLL----DNVKKVqeaveenRALFGTIDsWLIWSLTGgihggVHCTDVTNASRTMLFNIHSLEW 243
Cdd:cd07808 121 ITGNPPLPGFTLPKLLWLKenepEIFARI-------RKILLPKD-YLRYRLTG-----ELATDPSDASGTLLFDVEKREW 187
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 244 DKELCEFFGIPMEILPNVRSSSEIYGLMKAGA------LEGVP-ISGClGDQSAALVGQMCFQDGQAKNTYGTGCFLLCN 316
Cdd:cd07808 188 SEELLEALGLDPSILPPIVESTEIVGTLTPEAaeelglPEGTPvVAGA-GDNAAAALGAGVVEPGDALISLGTSGVVFAP 266
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 317 TgHKCVFSEHGLLTTVAYKLGrdkPVYYALeGSVAIAGAVIRWLRDNLGIIKSS-EEIEKLAKEVG-TSYGCYFVPAFSG 394
Cdd:cd07808 267 T-DKPVPDPKGRLHTFPHAVP---GKWYAM-GVTLSAGLSLRWLRDLFGPDRESfDELDAEAAKVPpGSEGLLFLPYLSG 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 395 LYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMnRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPV 474
Cdd:cd07808 342 ERTPYWDPNARGSFFGLSLSHTRAHLARAVLEGVAFSLRDSLEVL-KELGIKVKEIRLIGGGAKSPLWRQILADVLGVPV 420
|
....*....
gi 569009727 475 VKPSMPETT 483
Cdd:cd07808 421 VVPAEEEGS 429
|
|
| ASKHA_NBD_FGGY_GntK |
cd07770 |
nucleotide-binding domain (NBD) of gluconate kinase (GntK) and similar proteins; GntK (EC 2.7. ... |
15-483 |
5.95e-71 |
|
nucleotide-binding domain (NBD) of gluconate kinase (GntK) and similar proteins; GntK (EC 2.7.1.12), also known as gluconokinase, catalyzes the ATP-dependent phosphorylation of D-gluconate and produce 6-phospho-D-gluconate and ADP. The presence of Mg2+ might be required for catalytic activity. The prototypical member of this subfamily is GntK from Lactobacillus acidophilus. Unlike Escherichia coli GntK, which belongs to the superfamily of P-loop containing nucleoside triphosphate hydrolases, Members of this subfamily are homologous to glycerol kinase, xylulose kinase, and rhamnulokinase from Escherichia coli. They have been classified as members of the FGGY family of carbohydrate kinases, which contain two large domains separated by a deep cleft that forms the active site. This model spans both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466790 [Multi-domain] Cd Length: 478 Bit Score: 235.91 E-value: 5.95e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTRFLVFNSKtAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGQLNIDisnikAIGVSNQR 94
Cdd:cd07770 4 GIDIGTTSTKAVLFDED-GRVVASSSAEYPLIRPEPGWAEQDPEEILEAVLEALKEVLAKLGGGEVD-----AIGFSSAM 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 95 ETTVVWDKvTGEPLynavaAPVSPgssvpvavvpsgssvpaagassvWLDLRTQSTVENLSKRIPGNNnfVKSKTGLPLS 174
Cdd:cd07770 78 HSLLGVDE-DGEPL-----TPVIT-----------------------WADTRAAEEAERLRKEGDGSE--LYRRTGCPIH 126
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 175 TYFSAVKLRWLldnvKKVQEAVEENRALFGTIDSWLIWSLTGgihggVHCTDVTNASRTMLFNIHSLEWDKELCEFFGIP 254
Cdd:cd07770 127 PMYPLAKLLWL----KEERPELFAKAAKFVSIKEYLLYRLTG-----ELVTDYSTASGTGLLNIHTLDWDEEALELLGID 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 255 MEILPNVRSSSEIYGLMKA------GALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTgcfllcnTGHKCVFSEHGL 328
Cdd:cd07770 198 EEQLPELVDPTEVLPGLKPefaerlGLLAGTPVVLGASDGALANLGSGALDPGRAALTVGT-------SGAIRVVSDRPV 270
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 329 LT----TVAYKLGRDKPVyyaLEGSVAIAGAVIRWLRDNLGIIKSS-EEIEKLAKEVG-TSYGCYFVPAFSGLYAPYWEP 402
Cdd:cd07770 271 LDppgrLWCYRLDENRWL---VGGAINNGGNVLDWLRDTLLLSGDDyEELDKLAEAVPpGSHGLIFLPYLAGERAPGWNP 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 403 SARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMnRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPET 482
Cdd:cd07770 348 DARGAFFGLTLNHTRADILRAVLEGVAFNLKSIYEAL-EELAGPVKEIRASGGFLRSPLWLQILADVLGRPVLVPEEEEA 426
|
.
gi 569009727 483 T 483
Cdd:cd07770 427 S 427
|
|
| ASKHA_NBD_FGGY_RrXK-like |
cd07804 |
nucleotide-binding domain (NBD) of Rhodospirillum rubrum xylulose kinase (RrXK) and similar ... |
12-478 |
1.16e-64 |
|
nucleotide-binding domain (NBD) of Rhodospirillum rubrum xylulose kinase (RrXK) and similar proteins; The subfamily contains a group of uncharacterized proteins with similarity to Rhodospirillum rubrum xylulose kinase (RrXK). Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466806 [Multi-domain] Cd Length: 451 Bit Score: 218.55 E-value: 1.16e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 12 LVGaVDQGTSSTRFLVFNSKtAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGqlnIDISNIKAIGVS 91
Cdd:cd07804 2 LLG-IDIGTTGTKGVLVDED-GKVLASASIEHDLLTPKPGWAEHDPEVWWGAVCEIIRELLAKAG---ISPKEIAAIGVS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 92 NQRETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPGNNNFvkSKTGL 171
Cdd:cd07804 77 GLVPALVPVDE-NGKPLRPAI----------------------------LYGDRRATEEIEWLNENIGEDRIF--EITGN 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 172 PLSTYFSAVKLRWLLDNvkkvQEAVEENRALFGTIDSWLIWSLTGgihggVHCTDVTNASRTM-LFNIHSLEWDKELCEF 250
Cdd:cd07804 126 PLDSQSVGPKLLWIKRN----EPEVFKKTRKFLGAYDYIVYKLTG-----EYVIDYSSAGNEGgLFDIRKRTWDEELLEA 196
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 251 FGIPMEILPNVRSSSEIYGLMKAGA------LEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGT-GCFLLCntgHKCVF 323
Cdd:cd07804 197 LGIDPDLLPELVPSTEIVGEVTKEAaeetglAEGTPVVAGTVDAAASALSAGVVEPGDLLLMLGTaGDIGVV---TDKLP 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 324 SEHGLLTTVAyklgrDKPVYYALEGSVAIAGAVIRWLRDNLGIIKSSEE----------IEKLAKEVG-TSYGCYFVPAF 392
Cdd:cd07804 274 TDPRLWLDYH-----DIPGTYVLNGGMATSGSLLRWFRDEFAGEEVEAEksggdsaydlLDEEAEKIPpGSDGLIVLPYF 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 393 SGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDcGIPLSHLQVDGGMTSNKILMQLQADILYI 472
Cdd:cd07804 349 MGERTPIWDPDARGVIFGLTLSHTRAHLYRALLEGVAYGLRHHLEVIREA-GLPIKRLVAVGGGAKSPLWRQIVADVTGV 427
|
....*.
gi 569009727 473 PVVKPS 478
Cdd:cd07804 428 PQEYVK 433
|
|
| ASKHA_NBD_FGGY_CvXK-like |
cd07805 |
nucleotide-binding domain (NBD) of Chromobacterium violaceum xylulose kinase (CvXK) and ... |
15-481 |
9.98e-63 |
|
nucleotide-binding domain (NBD) of Chromobacterium violaceum xylulose kinase (CvXK) and similar proteins; The subfamily contains a group of uncharacterized proteins with similarity to Chromobacterium violaceum xylulose kinase (CvXK). Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466807 [Multi-domain] Cd Length: 485 Bit Score: 214.31 E-value: 9.98e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTrflvfnsKTA------ELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECiekTCEKLGQLNIDISNIKAI 88
Cdd:cd07805 4 AIDLGTSGV-------KAAlvdldgELVASAFAPYPTYYPKPGWAEQDPEDWWDAVCRA---TRALLEKSGIDPSDIAAI 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 89 GVSNQRETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPGNNnFVKSK 168
Cdd:cd07805 74 AFSGQMQGVVPVDK-DGNPLRNAI----------------------------IWSDTRAAEEAEEIAGGLGGIE-GYRLG 123
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 169 TGLPLSTYFSAVKLRWLLDNVKkvqEAVEENRALFGTIDsWLIWSLTGgihggVHCTDVTNASRTMLFNIHSLEWDKELC 248
Cdd:cd07805 124 GGNPPSGKDPLAKILWLKENEP---EIYAKTHKFLDAKD-YLNFRLTG-----RAATDPSTASTTGLMDLRKRRWSEELL 194
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 249 EFFGIPMEILPNVRSSSEIYG--LMKA----GALEGVPISGCLGDQSAALVGQMCFQDGQAkNTY-GTGCFLLCNTGHKC 321
Cdd:cd07805 195 RAAGIDPDKLPELVPSTEVVGelTPEAaaelGLPAGTPVVGGGGDAAAAALGAGAVEEGDA-HIYlGTSGWVAAHVPKPK 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 322 VFSEHGLLTTVAyklgrDKPVYYALEGSVAIAGAVIRWLRDNLGIIKSS-----EEIEKLAKEVGT-SYGCYFVPAFSGL 395
Cdd:cd07805 274 TDPDHGIFTLAS-----ADPGRYLLAAEQETAGGALEWARDNLGGDEDLgaddyELLDELAAEAPPgSNGLLFLPWLNGE 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 396 YAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGiPLSHLQVDGGMTSNKILMQLQADILYIPVV 475
Cdd:cd07805 349 RSPVEDPNARGAFIGLSLEHTRADLARAVLEGVAFNLRWLLEALEKLTR-KIDELRLVGGGARSDLWCQILADVLGRPVE 427
|
....*.
gi 569009727 476 KPSMPE 481
Cdd:cd07805 428 VPENPQ 433
|
|
| FGGY_C |
pfam02782 |
FGGY family of carbohydrate kinases, C-terminal domain; This domain adopts a ribonuclease ... |
303-486 |
2.19e-45 |
|
FGGY family of carbohydrate kinases, C-terminal domain; This domain adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain.
Pssm-ID: 426979 [Multi-domain] Cd Length: 197 Bit Score: 159.03 E-value: 2.19e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 303 AKNTYGTGCFLLCNTGHKCVFsEHGLLTTVAyklGRDKPVYYALEGSVAIAGAVIRWLRDNLGI---------IKSSEEI 373
Cdd:pfam02782 1 LAISAGTSSFVLVETPEPVLS-VHGVWGPYT---NEMLPGYWGLEGGQSAAGSLLAWLLQFHGLreelrdagnVESLAEL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 374 EKLAKEVGTSyGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVD 453
Cdd:pfam02782 77 AALAAVAPAG-GLLFYPDFSGNRAPGADPGARGSITGLSSPTTLAHLYRAILESLALQLRQILEALTKQEGHPIDTIHVS 155
|
170 180 190
....*....|....*....|....*....|...
gi 569009727 454 GGMTSNKILMQLQADILYIPVVKPSMPETTALG 486
Cdd:pfam02782 156 GGGSRNPLLLQLLADALGLPVVVPGPDEATALG 188
|
|
| ASKHA_NBD_FGGY_EcLyxK-like |
cd07802 |
nucleotide-binding domain (NBD) of Escherichia coli L-xylulose/3-keto-L-gulonate kinase ... |
12-483 |
3.60e-44 |
|
nucleotide-binding domain (NBD) of Escherichia coli L-xylulose/3-keto-L-gulonate kinase (EcLyxK) and similar proteins; The subfamily contains a group of uncharacterized proteins with similarity to Escherichia coli L-xylulose/3-keto-L-gulonate kinase (EcLyxK; EC 2.7.1.-/EC 2.7.1.53), Pasteurella multocida L-xylulose kinase (PmLyX, also known as L-xylulokinase; EC 2.7.1.53), and Brucella abortus erythritol kinase (BaEryA; EC 2.7.1.215). EcLyxK catalyzes the phosphorylation of L-xylulose and 3-keto-L-gulonate. It is involved in L-lyxose utilization via xylulose and may also be involved in the utilization of 2,3-diketo-L-gulonate. PmLyX catalyzes the phosphorylation of L-xylulose only. BaEryA catalyzes the phosphorylation of erythritol to D-erythritol-1-phosphate. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466805 [Multi-domain] Cd Length: 444 Bit Score: 162.72 E-value: 3.60e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 12 LVGaVDQGTSSTRFLVFNSKTAELLSHHqVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGqlnIDISNIKAIGVS 91
Cdd:cd07802 2 LLG-IDNGTTNVKAVLFDLDGREIAVAS-RPTPVISPRPGWAERDMDELWQATAEAIRELLEKSG---VDPSDIAGVGVT 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 92 NQRETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRipGNNNFVKSKTGL 171
Cdd:cd07802 77 GHGNGLYLVDK-DGKPVRNAI----------------------------LSNDSRAADIVDRWEED--GTLEKVYPLTGQ 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 172 PLSTYFSAVKLRWLLDNVKKVQEAVeenRALFGTIDsWLIWSLTggihgGVHCTDVTNASrTMLFNIHSLEWDKELCEFF 251
Cdd:cd07802 126 PLWPGQPVALLRWLKENEPERYDRI---RTVLFCKD-WIRYRLT-----GEISTDYTDAG-SSLLDLDTGEYDDELLDLL 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 252 GIP--MEILPNVRSSSEIYGLMKAGA------LEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCfllCNTG--HKC 321
Cdd:cd07802 196 GIEelKDKLPPLVPSTEIAGRVTAEAaaltglPEGTPVAAGAFDVVASALGAGAVDEGQLCVILGTWS---INEVvtDEP 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 322 VFSEHGLLTTvaykLGRDKPVYYALEGSVAIAGaVIRWLRDNLG------IIKSSEEIEKLAKEVG-TSYGCYFVPaFsg 394
Cdd:cd07802 273 VVPDSVGSNS----LHADPGLYLIVEASPTSAS-NLDWFLDTLLgeekeaGGSDYDELDELIAAVPpGSSGVIFLP-Y-- 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 395 LYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCgiPLSHLQVDGGMTSNKILMQLQADILYIPV 474
Cdd:cd07802 345 LYGSGANPNARGGFFGLTAWHTRAHLLRAVYEGIAFSHRDHLERLLVAR--KPETIRLTGGGARSPVWAQIFADVLGLPV 422
|
....*....
gi 569009727 475 VKPSMPETT 483
Cdd:cd07802 423 EVPDGEELG 431
|
|
| ASKHA_NBD_FGGY_YoaC-like |
cd07798 |
nucleotide-binding domain (NBD) of Bacillus subtilis sugar kinase YoaC and similar proteins; ... |
15-483 |
2.33e-42 |
|
nucleotide-binding domain (NBD) of Bacillus subtilis sugar kinase YoaC and similar proteins; The subfamily includes a group of uncharacterized proteins with similarity to Bacillus subtilis sugar kinase YoaC. It is part of the yoaDCB operon and induced by sulfate. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466804 [Multi-domain] Cd Length: 448 Bit Score: 158.15 E-value: 2.33e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPREGW-VEQDPKEILQSVYECIEKTcekLGQLNIDISNIKAIGVSNQ 93
Cdd:cd07798 4 VIDIGTGGGRCALVDSEGKIVAIAYREWEYYTDDDYPDaKEFDPEELWEKICEAIREA---LKKAGISPEDISAVSSTSQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 94 RETTVVWDKvTGEPLYnavaapvspgssvpvaVVPSgssvpaagassvwLDLRTQSTVENLSKRIPgnnNFVKSKTGLPL 173
Cdd:cd07798 81 REGIVFLDK-DGRELY----------------AGPN-------------IDARGVEEAAEIDDEFG---EEIYTTTGHWP 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 174 STYFSAVKLRWLldnvKKVQEAVEENRALFGTIDSWLIWSLTGGIHggvhcTDVTNASRTMLFNIHSLEWDKELCEFFGI 253
Cdd:cd07798 128 TELFPAARLLWF----KENRPEIFERIATVLSISDWIGYRLTGELV-----SEPSQASETQLFDIKKREWSQELLEALGL 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 254 PMEILPNVRSSSEIYGLMKAGA------LEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGhKCVFSEHG 327
Cdd:cd07798 199 PPEILPEIVPSGTVLGTVSEEAarelglPEGTPVVVGGADTQCALLGSGAIEPGDIGIVAGTTTPVQMVTD-EPIIDPER 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 328 LLTTVAYkLGRDKpvyYALEGSVAIAGAVIRWLRDNL--GIIKSSEEIEKLAKEVG-TSYGCYfvpAFSGLYAPYwePSA 404
Cdd:cd07798 278 RLWTGCH-LVPGK---WVLESNAGVTGLNYQWLKELLygDPEDSYEVLEEEASEIPpGANGVL---AFLGPQIFD--ARL 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 405 RGIICGLTQFT--------NKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVK 476
Cdd:cd07798 349 SGLKNGGFLFPtplsaselTRGDFARAILENIAFAIRANLEQLEEVSGREIPYIILCGGGSRSALLCQILADVLGKPVLV 428
|
....*..
gi 569009727 477 PSMPETT 483
Cdd:cd07798 429 PEGREAS 435
|
|
| ASKHA_NBD_FGGY_SePSK_AtXK1-like |
cd07783 |
nucleotide-binding domain (NBD) of Synechococcus elongatus putative sugar kinase (SePSK), ... |
15-482 |
2.37e-41 |
|
nucleotide-binding domain (NBD) of Synechococcus elongatus putative sugar kinase (SePSK), Arabidopsis thaliana xylulose kinase-1 (AtXK-1) and similar proteins; This subfamily corresponds to a group of uncharacterized bacterial proteins with similarity to Synechococcus elongatus putative sugar kinase (also known as SePSK; D-ribulose kinase; D-ribulokinase) and Arabidopsis thaliana xylulose kinase-1 (also known as AtXK-1; D-ribulose kinase; D-ribulokinase; inactive xylulose kinase 1). Both kinases exhibit ATP hydrolysis without substrate and can phosphorylate D-ribulose. They belong to the ribulokinase-like carbohydrate kinases, a subfamily of FGGY family carbohydrate kinases. Ribulokinase-like carbohydrate kinases are responsible for the phosphorylation of sugars such as L-ribulose and D-ribulose. Their monomers contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466801 [Multi-domain] Cd Length: 429 Bit Score: 154.69 E-value: 2.37e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTRFLVFNSKtAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLgqlniDISNIKAIGVSNQR 94
Cdd:cd07783 4 GIDLGTSGVRAVVVDED-GTVLASASEPYPTSRPGPGWVEQDPEDWWEALRSLLRELPAEL-----RPRRVVAIAVDGTS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 95 ETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPgnnnFVKSKTGLPLS 174
Cdd:cd07783 78 GTLVLVDR-EGEPLRPAI----------------------------MYNDARAVAEAEELAEAAG----AVAPRTGLAVS 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 175 TYFSAVKLRWLLDNVKKVQEAVeenrALFGTIDSWLIWSLTGGihggVHCTDVTNASRTmLFNIHSLEWDKELCEFFGIP 254
Cdd:cd07783 125 PSSSLAKLLWLKRHEPEVLAKT----AKFLHQADWLAGRLTGD----RGVTDYNNALKL-GYDPETGRWPSWLLALLGIP 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 255 MEILPNVRSSSEIYGLMKA------GALEGVPIsgCLG--DQSAALVGQMCFQDGQAKNTYGTgcfllcntghkcvfseh 326
Cdd:cd07783 196 PDLLPRVVAPGTVIGTLTAeaaeelGLPAGTPV--VAGttDSIAAFLASGAVRPGDAVTSLGT----------------- 256
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 327 glltTVAYKLGRDKPV---------------YYALEGSVAIAGAVIRWLrdnlgiiKSSEEIEKLAKEVGTSY--GCYFV 389
Cdd:cd07783 257 ----TLVLKLLSDKRVpdpgggvyshrhgdgYWLVGGASNTGGAVLRWF-------FSDDELAELSAQADPPGpsGLIYY 325
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 390 P-AFSGLYAPYWEPSARGIICGLTqfTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQAD 468
Cdd:cd07783 326 PlPLRGERFPFWDPDARGFLLPRP--HDRAEFLRALLEGIAFIERLGYERLEELGAPPVEEVRTAGGGARNDLWNQIRAD 403
|
490
....*....|....
gi 569009727 469 ILYIPVVKPSMPET 482
Cdd:cd07783 404 VLGVPVVIAEEEEA 417
|
|
| ASKHA_NBD_FGGY_BaXK-like |
cd07809 |
nucleotide-binding domain (NBD) of Bifidobacterium adolescentis xylulose kinase (XK) and ... |
8-482 |
3.22e-34 |
|
nucleotide-binding domain (NBD) of Bifidobacterium adolescentis xylulose kinase (XK) and similar proteins; The subfamily includes a group of uncharacterized proteins with similarity to xylulose kinases (XKs) from Bifidobacterium adolescentis, Streptomyces coelicolor, Actinoplanes missouriensis and Haemophilus influenzae. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466809 [Multi-domain] Cd Length: 443 Bit Score: 134.99 E-value: 3.22e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 8 VLGplvgaVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTcekLGQLNIDISNIKA 87
Cdd:cd07809 2 VLG-----IDLGTQSIKAVLIDAETGRVVASGSAPHENILIDPGWAEQDPEDWWDALQAAFAQL---LKDAGAELRDVAA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 88 IGVSNQRETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPGNNnfvKS 167
Cdd:cd07809 74 IGISGQMHGLVALDA-DGKVLRPAK----------------------------LWCDTRTAPEAEELTEALGGKK---CL 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 168 KTGLPLSTYFSAVKLRWLLDN----VKKVqeaveenrALFGTIDSWLIWSLTGGihggvHCTDVTNASRTMLFNIHSLEW 243
Cdd:cd07809 122 LVGLNIPARFTASKLLWLKENepehYARI--------AKILLPHDYLNWKLTGE-----KVTGLGDASGTFPIDPRTRDY 188
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 244 DKELCEFF---GIPMEILPNVRSSSEIYG-LMKAGALE-----GVPISGCLGDQSAALVGQMCFQDGQAKNTYGT-GCfl 313
Cdd:cd07809 189 DAELLAAIdpsRDLRDLLPEVLPAGEVAGrLTPEGAEElglpaGIPVAPGEGDNMTGALGTGVVNPGTVAVSLGTsGT-- 266
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 314 LCNTGHKCVFSEHGLLTTVAyklgrDKPVYYALegSVAIAGAVIRWLRDNLGIIKSS-EEIEKLAKEV-GTSYGCYFVPA 391
Cdd:cd07809 267 AYGVSDKPVSDPHGRVATFC-----DSTGGMLP--LINTTNCLTAWTELFRELLGVSyEELDELAAQApPGAGGLLLLPF 339
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 392 FSGLYAPYWePSARGIICGLTQF-TNKCHIAFAALEAVCFQTREILDAMnRDCGIPLSHLQVDGGMTSNKILMQLQADIL 470
Cdd:cd07809 340 LNGERTPNL-PHGRASLVGLTLSnFTRANLARAALEGATFGLRYGLDIL-RELGVEIDEIRLIGGGSKSPVWRQILADVF 417
|
490
....*....|..
gi 569009727 471 YIPVVKPSMPET 482
Cdd:cd07809 418 GVPVVVPETGEG 429
|
|
| ASKHA_NBD_FGGY_SHK |
cd07777 |
nucleotide-binding domain (NBD) of sedoheptulokinase (SHK) and similar proteins; SHK (EC 2.7.1. ... |
15-483 |
1.52e-28 |
|
nucleotide-binding domain (NBD) of sedoheptulokinase (SHK) and similar proteins; SHK (EC 2.7.1.14), also called heptulokinase, or carbohydrate kinase-like protein (CARKL), is encoded by the carbohydrate kinase-like (CARKL/SHPK) gene. It acts as a modulator of macrophage activation through control of glucose metabolism. SHK catalyzes the ATP-dependent phosphorylation of sedoheptulose to produce sedoheptulose 7-phosphate and ADP. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466796 [Multi-domain] Cd Length: 436 Bit Score: 118.48 E-value: 1.52e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTRFLVFNSKTAELLS----HHQVEIKQEFPreGWVEQDPKEILQSVYECIEKTCEKLGqlnidiSNIKAIGV 90
Cdd:cd07777 4 GIDIGTTSIKAALLDLESGRILEsvsrPTPAPISSDDP--GRSEQDPEKILEAVRNLIDELPREYL------SDVTGIGI 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 91 SNQRETTVVWDK----VTgePLYNavaapvspgssvpvavvpsgssvpaagassvWLDLRTQSTVENLSKRIPGNnnfVK 166
Cdd:cd07777 76 TGQMHGIVLWDEdgnpVS--PLIT-------------------------------WQDQRCSEEFLGGLSTYGEE---LL 119
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 167 SKTGLPLSTYFSAVKLRWLLdnvkkVQEAVEENRALFGTIDSWLIWSLTGGIHggvHCTDVTNASRTMLFNIHSLEWDKE 246
Cdd:cd07777 120 PKSGMRLKPGYGLATLFWLL-----RNGPLPSKADRAGTIGDYIVARLTGLPK---PVMHPTNAASWGLFDLETGTWNKD 191
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 247 LCEFFGIPMEILPNVRSSSEIYGLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTG---CFLLC-NTGHKCV 322
Cdd:cd07777 192 LLEALGLPVILLPEIVPSGEIVGTLSSALPKGIPVYVALGDNQASVLGSGLNEENDAVLNIGTGaqlSFLTPkFELSGSV 271
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 323 ----FSEHGLLTTVAyKL--GRdkpVYYALEGSVAiagaviRWLRDnLGIIKSSEEI-EKLAKEVGTSYGC--YFVPAFS 393
Cdd:cd07777 272 eirpFFDGRYLLVAA-SLpgGR---ALAVLVDFLR------EWLRE-LGGSLSDDEIwEKLDELAESEESSdlSVDPTFF 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 394 GlyaPYWEPSARGIICGLTQ--FTNKcHIAFAALEAVCfqtREILDAMNRDC--GIPLSHLQVDGGM-TSNKILMQLQAD 468
Cdd:cd07777 341 G---ERHDPEGRGSITNIGEsnFTLG-NLFRALCRGIA---ENLHEMLPRLDldLSGIERIVGSGGAlRKNPVLRRIIEK 413
|
490
....*....|....*
gi 569009727 469 ILYIPVVKPSMPETT 483
Cdd:cd07777 414 RFGLPVVLSEGSEEA 428
|
|
| ASKHA_NBD_FGGY_BaEryA-like |
cd24121 |
nucleotide-binding domain (NBD) of Brucella abortus erythritol kinase (BaEryA) and similar ... |
12-482 |
9.37e-27 |
|
nucleotide-binding domain (NBD) of Brucella abortus erythritol kinase (BaEryA) and similar proteins; The subfamily contains a group of uncharacterized proteins with similarity to Brucella abortus erythritol kinase (BaEryA; EC 2.7.1.215). It catalyzes the phosphorylation of erythritol to D-erythritol-1-phosphate. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466971 [Multi-domain] Cd Length: 452 Bit Score: 113.49 E-value: 9.37e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 12 LVGaVDQGTSSTRFLVFNSKTAELlSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGQLNidiSNIKAIGVS 91
Cdd:cd24121 2 LIG-IDAGTSVVKAVAFDLDGREL-AVAARRNAVLYPQPGWAEQDMNETWQAVVATIREVVAKLDVLP---DRVAAIGVT 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 92 NQRETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRipGNNNFVKSKTGL 171
Cdd:cd24121 77 GQGDGTWLVDE-DGRPVRDAI----------------------------LWLDGRAADIVERWQAD--GIAEAVFEITGT 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 172 PLSTYFSAVKLRWLLDNVKkvqEAVEENRALFGTIDsWLIWSLTGGIhggvhCTDVTNASRTMlFNIHSLEWDKELCEFF 251
Cdd:cd24121 126 GLFPGSQAAQLAWLKENEP---ERLERARTALHCKD-WLFYKLTGEI-----ATDPSDASLTF-LDFRTRQYDDEVLDLL 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 252 GIP--MEILPNVRSSSEIYGLMKA------GALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFllcntghkcvf 323
Cdd:cd24121 196 GLEelRHLLPPIRPGTEVIGPLTPeaaaatGLPAGTPVVLGPFDVVATALGSGAIEPGDACSILGTTGV----------- 264
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 324 seHGLLTTVAYkLGRDKP---VYYALEGSV-----AIAG-AVIRWLRDNLGIIKSSE----------EIEKLAKEV---- 380
Cdd:cd24121 265 --HEVVVDEPD-LEPEGVgytICLGVPGRWlramaNMAGtPNLDWFLRELGEVLKEGaepagsdlfqDLEELAASSppga 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 381 -GTSYGCYFVPAfsGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMnrdcGIPLSHLQVDGGMTSN 459
Cdd:cd24121 342 eGVLYHPYLSPA--GERAPFVNPNARAQFTGLSLEHTRADLLRAVYEGVALAMRDCYEHM----GEDPGELRLSGGGARS 415
|
490 500
....*....|....*....|...
gi 569009727 460 KILMQLQADILYIPVVKPSMPET 482
Cdd:cd24121 416 DTWCQILADALGVPVRVPAGEEF 438
|
|
| ASKHA_NBD_FGGY_L-RBK |
cd07781 |
nucleotide-binding domain (NBD) of ribulokinase (RBK) and similar proteins; RBK (EC 2.7.1.16; ... |
8-483 |
3.83e-25 |
|
nucleotide-binding domain (NBD) of ribulokinase (RBK) and similar proteins; RBK (EC 2.7.1.16; also known as L-ribulokinase) catalyzes the MgATP-dependent phosphorylation of L(or D)-ribulose to produce L(or D)-ribulose 5-phosphate and ADP, which is the second step in arabinose catabolism. It also phosphorylates a variety of other sugar substrates including ribitol and arabitol. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466799 [Multi-domain] Cd Length: 504 Bit Score: 109.16 E-value: 3.83e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 8 VLGplvgaVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEF--PREGWVEQDPKEILQSVYECIEKTCEKLGqlnIDISNI 85
Cdd:cd07781 2 VIG-----IDFGTQSVRAGLVDLADGEELASAVVPYPTGYipPRPGWAEQNPADYWEALEEAVRGALAEAG---VDPEDV 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 86 KAIGVSNQRETTVVWDKvTGEPLYNAVaapvspgssvpvavvpsgssvpaagassVWLDLRTQSTVENLSKRIPGNNNFV 165
Cdd:cd07781 74 VGIGVDTTSSTVVPVDE-DGNPLAPAI----------------------------LWMDHRAQEEAAEINETAHPALEYY 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 166 KSKTGLPLS--TYFSavKLRWLLDNVKKVQEA----VEEnralfgtIDsWLIWSLTGGIHGGVhCtdvtNASRTMLFNIH 239
Cdd:cd07781 125 LAYYGGVYSseWMWP--KALWLKRNAPEVYDAaytiVEA-------CD-WINARLTGRWVRSR-C----AAGHKWMYNEW 189
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 240 SLEWDKELCEFFGIPM----EILP-NVRSSSEIYGLMKA------GALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYG 308
Cdd:cd07781 190 GGGPPREFLAALDPGLlklrEKLPgEVVPVGEPAGTLTAeaaerlGLPAGIPVAQGGIDAHMGAIGAGVVEPGTLALIMG 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 309 T-GCFLLcnTGHKCVFSEhGLLTTVayklgrDKPV---YYALEGSVAIAGAVIRWLRDNLGI------IKSSEEIEKLAK 378
Cdd:cd07781 270 TsTCHLM--VSPKPVDIP-GICGPV------PDAVvpgLYGLEAGQSAVGDIFAWFVRLFVPpaeergDSIYALLSEEAA 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 379 EVGTsyGCyfvpafSGLYA---------PYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMnRDCGIPLSH 449
Cdd:cd07781 341 KLPP--GE------SGLVAldwfngnrtPLVDPRLRGAIVGLTLGTTPAHIYRALLEATAFGTRAIIERF-EEAGVPVNR 411
|
490 500 510
....*....|....*....|....*....|....*
gi 569009727 450 LQVDGGMTS-NKILMQLQADILYIPVVKPSMPETT 483
Cdd:cd07781 412 VVACGGIAEkNPLWMQIYADVLGRPIKVPKSDQAP 446
|
|
| ASKHA_NBD_FGGY_AI-2K |
cd07775 |
nucleotide-binding domain (NBD) of autoinducer-2 kinase (AI-2 kinase) and similar proteins; ... |
15-483 |
4.59e-24 |
|
nucleotide-binding domain (NBD) of autoinducer-2 kinase (AI-2 kinase) and similar proteins; AI-2 kinase (EC 2.7.1.189), also known as LsrK, catalyzes the phosphorylation of autoinducer-2 (AI-2) to phospho-AI-2, which subsequently inactivates the transcriptional regulator LsrR and leads to the transcription of the lsr operon. It phosphorylates the ring-open form of (S)-4,5-dihydroxypentane-2,3-dione (DPD), which is the precursor to all AI-2 signaling molecules, at the C5 position. It is required for the regulation of the lsr operon and many other genes. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466794 [Multi-domain] Cd Length: 492 Bit Score: 105.88 E-value: 4.59e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTRFLVFNsKTAELLSHHQVE-IKQEFPR-EGWVEQDPKEILQSVYECIEKTCEklgQLNIDISNIKAIGVSN 92
Cdd:cd07775 4 ALDAGTGSGRAVIFD-LEGNQIAVAQREwRHKEVPDvPGSMDFDTEKNWKLICECIREALK---KAGIAPKSIAAISTTS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 93 QRETTVVWDKvTGEPLYnAVAApvspgssvpvavvpsgssvpaagassvwLDLRTQSTVENLSKRIPGNNNFVKSKTGLP 172
Cdd:cd07775 80 MREGIVLYDN-EGEEIW-ACAN----------------------------VDARAAEEVSELKELYNTLEEEVYRISGQT 129
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 173 LStyFSAV-KLRWLLDNVKKVQEAVeenrALFGTIDSWLIWSLTGGIhggvhCTDVTNASRTMLFNIHSLEWDKELCEFF 251
Cdd:cd07775 130 FA--LGAIpRLLWLKNNRPEIYRKA----AKITMLSDWIAYKLSGEL-----AVEPSNGSTTGLFDLKTRDWDPEILEMA 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 252 GIPMEILPNVRSSSEIYGLMKA------GALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGHKcVFSE 325
Cdd:cd07775 199 GLKADILPPVVESGTVIGKVTKeaaeetGLKEGTPVVVGGGDVQLGCLGLGVVRPGQTAVLGGSFWQQEVNTAAP-VTDP 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 326 HGLLTTVAYKLgrdkPVYYALEGSVAIAGAVIRWLRDNLGI----------IKSSEEIEKLAKEVGTsyGCY-FVPAFSG 394
Cdd:cd07775 278 AMNIRVNCHVI----PDMWQAEGISFFPGLVMRWFRDAFCAeekeiaerlgIDAYDLLEEMAKDVPP--GSYgIMPIFSD 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 395 L--YApYWEPSARGIIcGLTQFTNKCHIA--FAAL-EAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADI 469
Cdd:cd07775 352 VmnYK-NWRHAAPSFL-NLDIDPEKCNKAtfFRAImENAAIVSAGNLERIAEFSGIFPDSLVFAGGASKGKLWCQILADV 429
|
490
....*....|....
gi 569009727 470 LYIPVVKPSMPETT 483
Cdd:cd07775 430 LGLPVKVPVVKEAT 443
|
|
| PRK10331 |
PRK10331 |
L-fuculokinase; Provisional |
17-484 |
8.74e-21 |
|
L-fuculokinase; Provisional
Pssm-ID: 182383 [Multi-domain] Cd Length: 470 Bit Score: 95.48 E-value: 8.74e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 17 DQGTSSTRFLVFNSKTAELLSHHQ---VEIKQEFPRegWVEQDPKEILQSVYECIEKTCEKLGQlnidiSNIKAIGVsnq 93
Cdd:PRK10331 8 DCGATNVRAIAVDRQGKIVARASTpnaSDIAAENSD--WHQWSLDAILQRFADCCRQINSELTE-----CHIRGITV--- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 94 reTT-----VVWDKvTGEPLYnavaapvspgssvPVAVvpsgssvpaagassvWLDLRTQSTVENLSKRIPGNNNFVKSK 168
Cdd:PRK10331 78 --TTfgvdgALVDK-QGNLLY-------------PIIS---------------WKCPRTAAVMENIERYISAQQLQQISG 126
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 169 TG-LPLSTYFsavKLRWLldnvkkvqeavEENRA-LFGTIDSWL-IWSLTGGIHGGVHCTDVTNASRTMLFNIHSLEWDK 245
Cdd:PRK10331 127 VGaFSFNTLY---KLVWL-----------KENHPqLLEQAHAWLfISSLINHRLTGEFTTDITMAGTSQMLDIQQRDFSP 192
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 246 ELCEFFGIPMEILPNVRSSSEIYGLMKAGALE------GVPISGCLGDQSAALVGQMCFQDgQAKNTYGTGCFLLCNTGH 319
Cdd:PRK10331 193 EILQATGLSRRLFPRLVEAGEQIGTLQPSAAAllglpvGIPVISAGHDTQFALFGSGAGQN-QPVLSSGTWEILMVRSAQ 271
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 320 ---KCVFSEHGLLTTVAYKLGRDKPvyyaleGSVAIAGAVIRWLRDNLGiikSSEE-----IEKlAKEVGT-SYGCYFVP 390
Cdd:PRK10331 272 vdtSLLSQYAGSTCELDSQSGLYNP------GMQWLASGVLEWVRKLFW---TAETpyqtmIEE-ARAIPPgADGVKMQC 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 391 AFSGlyapywepSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADIL 470
Cdd:PRK10331 342 DLLA--------CQNAGWQGVTLNTTRGHFYRAALEGLTAQLKRNLQVLEKIGHFKASELLLVGGGSRNALWNQIKANML 413
|
490
....*....|....
gi 569009727 471 YIPVVKPSMPETTA 484
Cdd:PRK10331 414 DIPIKVLDDAETTV 427
|
|
| PRK15027 |
PRK15027 |
xylulokinase; Provisional |
16-469 |
2.16e-17 |
|
xylulokinase; Provisional
Pssm-ID: 184987 [Multi-domain] Cd Length: 484 Bit Score: 85.02 E-value: 2.16e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 16 VDQGTSSTRFLVFNSKtAELLSHHQVEIKQEFPREGWVEQDPKEILQSVyeciEKTCEKLGQLNiDISNIKAIGVSNQRE 95
Cdd:PRK15027 5 IDLGTSGVKVILLNEQ-GEVVASQTEKLTVSRPHPLWSEQDPEQWWQAT----DRAMKALGDQH-SLQDVKALGIAGQMH 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 96 TTVVWDKvtgeplYNAVAAPvspgssvpvavvpsgssvpaagaSSVWLDLRTQSTVENLSKRIPGNnnfvKSKTGLPLST 175
Cdd:PRK15027 79 GATLLDA------QQRVLRP-----------------------AILWNDGRCAQECALLEARVPQS----RVITGNLMMP 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 176 YFSAVKLRWlldnVKKVQEAVEENRALFGTIDSWLIWSLTGgihggVHCTDVTNASRTMLFNIHSLEWDKELCEFFGIPM 255
Cdd:PRK15027 126 GFTAPKLLW----VQRHEPEIFRQIDKVLLPKDYLRLRMTG-----EFASDMSDAAGTMWLDVAKRDWSDVMLQACHLSR 196
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 256 EILPNVRSSSEIYG-----LMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTgcfllcnTGHKCVFSEhGLLT 330
Cdd:PRK15027 197 DQMPALYEGSEITGallpeVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGT-------SGVYFAVSE-GFLS 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 331 ---TVAYKLGRDKPVYYALEGSVAIAGAVIRW------LRDNLGIIKSSEEIEKLAKEVgtsygcYFVPAFSGLYAPYWE 401
Cdd:PRK15027 269 kpeSAVHSFCHALPQRWHLMSVMLSAASCLDWaakltgLSNVPALIAAAQQADESAEPV------WFLPYLSGERTPHNN 342
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 569009727 402 PSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNrDCGIPLSHLQVDGGMTSNKILMQLQADI 469
Cdd:PRK15027 343 PQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVH-ACGIKPQSVTLIGGGARSEYWRQMLADI 409
|
|
| ASKHA_NBD_FGGY_RBK-like |
cd07768 |
nucleotide-binding domain (NBD) of ribulokinase-like carbohydrate kinases; The RBK family ... |
16-482 |
4.90e-17 |
|
nucleotide-binding domain (NBD) of ribulokinase-like carbohydrate kinases; The RBK family includes bacterial RBK, vertebrate D-ribulokinase FGGY (also known as FGGY carbohydrate kinase domain-containing protein), Saccharomyces cerevisiae D-ribulokinase YDR109C, and Yersinia Pseudotuberculosis uncharacterized carbohydrate kinase that has been named glyerol/xylulose kinase. RBK (EC 2.7.1.16; also known as L-ribulokinase) catalyzes the MgATP-dependent phosphorylation of L(or D)-ribulose to produce L(or D)-ribulose 5-phosphate and ADP, which is the second step in arabinose catabolism. It also phosphorylates a variety of other sugar substrates including ribitol and arabitol. D-ribulokinase (EC 2.7.1.47) catalyzes ATP-dependent phosphorylation of D-ribulose at C-5 to form D-ribulose 5-phosphate. It is postulated to function in a metabolite repair mechanism by preventing toxic accumulation of free D-ribulose formed by non-specific phosphatase activities. Alternatively, D-ribulokinase may play a role in regulating D-ribulose 5-phosphate recycling in the pentose phosphate pathway. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466788 [Multi-domain] Cd Length: 522 Bit Score: 84.21 E-value: 4.90e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 16 VDQGTSSTRFLVFNSKTAELLSHHQVEIKQ-EFPREGWVEQDPKEILQSVYECIEKTcekLGQLNIDISNIKAIGVSNQR 94
Cdd:cd07768 5 VDVGTSSARAGVYDLYAGLEMAQEPVPYYQdSSKKSWKFWQKSTEIIKALQKCVQKL---NIREGVDAYEVKGCGVDATC 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 95 eTTVVWDKvTGEPlyNAVAAPVSPGSSVpvavvpsgssvpaagasSVWLDLRTQSTVENLskripgnnNFVKSKTGLP-- 172
Cdd:cd07768 82 -SLAIFDR-EGTP--LMALIPYPNEDNV-----------------IFWMDHSAVNEAQWI--------NMQCPQQLLDyl 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 173 ---LSTYFSAVKLRWLLDNVKKVQEAVEEnraLFGTIDsWLIWSLTGGIHGGVhCTDVTNASrtmlFNIHSLEWDKELCE 249
Cdd:cd07768 133 ggkISPEMGVPKLKYFLDEYSHLRDKHFH---IFDLHD-YIAYELTRLYEWNI-CGLLGKEN----LDGEESGWSSSFFK 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 250 FFGIPME------ILPNVRSSSEIYGLM------KAGALEGVPISGCLGDQSAALVGQmcfqdgqAKNTYGTGCFLLCNT 317
Cdd:cd07768 204 NIDPRLEhltttkNLPSNVPIGTTSGVAlpemaeKMGLHPGTAVVVSCIDAHASWFAV-------ASPHLETSLFMIAGT 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 318 GhkcvfSEHGLLTTVAYKL-GRDKPVYYAL-------EGSVAIAGAVIRWL-------RDNLGIIKSSEEI--------E 374
Cdd:cd07768 277 S-----SCHMYGTTISDRIpGVWGPFDTIIdpdysvyEAGQSATGKLIEHLfeshpcaRKFDEALKKGADIyqvleqtiR 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 375 KLAKEVGTSYGCYFVPAFSGLYAPYWEPSARGIICGLTQFT---NKCHIAFAALEAVCFQTREILDAMNRDcGIPLSHLQ 451
Cdd:cd07768 352 QIEKNNGLSIHILTLDMFFGNRSEFADPRLKGSFIGESLDTsmlNLTYKYIAILEALAFGTRLIIDTFQNE-GIHIKELR 430
|
490 500 510
....*....|....*....|....*....|.
gi 569009727 452 VDGGMTSNKILMQLQADILYIPVVKPSMPET 482
Cdd:cd07768 431 ASGGQAKNERLLQLIALVTNVAIIKPKENMM 461
|
|
| ASKHA_NBD_FGGY_D-RBK |
cd07782 |
nucleotide-binding domain (NBD) of D-ribulokinase FGGY and similar proteins; The subfamily ... |
15-482 |
8.81e-16 |
|
nucleotide-binding domain (NBD) of D-ribulokinase FGGY and similar proteins; The subfamily includes vertebrate D-ribulokinase FGGY (also known as FGGY carbohydrate kinase domain-containing protein) and similar proteins, such as Saccharomyces cerevisiae D-ribulokinase YDR109C, Yersinia Pseudotuberculosis uncharacterized carbohydrate kinase that has been named glyerol/xylulose kinase. D-ribulokinase (EC 2.7.1.47) catalyzes ATP-dependent phosphorylation of D-ribulose at C-5 to form D-ribulose 5-phosphate. It is postulated to function in a metabolite repair mechanism by preventing toxic accumulation of free D-ribulose formed by non-specific phosphatase activities. Alternatively, D-ribulokinase may play a role in regulating D-ribulose 5-phosphate recycling in the pentose phosphate pathway.
Pssm-ID: 466800 [Multi-domain] Cd Length: 540 Bit Score: 80.27 E-value: 8.81e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTRFLVFNSkTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGqlnIDISNIKAIGVsnqr 94
Cdd:cd07782 4 GVDVGTGSARAGLFDL-DGRLLATASQPITTWNPKPDFYEQSSEDIWQAVCEAVKEVLEGAG---VDPEQVKGIGF---- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 95 ETT---VVWDKvTGEPlynavaapvspgssvpVAVVPSGSS----VpaagassVWLDLRTQSTVEnlskRIpgnnnfvkS 167
Cdd:cd07782 76 DATcslVVLDA-EGKP----------------VSVSPSGDDernvI-------LWMDHRAVEEAE----RI--------N 119
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 168 KTGLPLSTYFSAV--------KLRWLldnvKKVQEAVEENRALFGTIDSWLIWSLTGgihggvhctdvtNASR------- 232
Cdd:cd07782 120 ATGHEVLKYVGGKispemeppKLLWL----KENLPETWAKAGHFFDLPDFLTWKATG------------SLTRslcslvc 183
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 233 --TMLFNIHSLE-WDKELCEFFG-----------IPMEILPNVRSSSEiyGLMKAGA-----LEGVPIS--------GCL 285
Cdd:cd07782 184 kwTYLAHEGSEGgWDDDFFKEIGledlvednfakIGSVVLPPGEPVGG--GLTAEAAkelglPEGTPVGvslidahaGGL 261
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 286 GDQSAALVGQMC-FQDGQAKntygtgCFLLCNTG--HkCVFSEHGLLttVA-----YKlGRDKPVYYALEGSVAIAGAVI 357
Cdd:cd07782 262 GTLGADVGGLPCeADPLTRR------LALICGTSscH-MAVSPEPVF--VPgvwgpYY-SAMLPGLWLNEGGQSATGALL 331
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 358 RWlrdnlgIIKS---SEEIEKLAKEVGTSY------------------------GCYFVPAFSGLYAPYWEPSARGIICG 410
Cdd:cd07782 332 DH------IIEThpaYPELKEEAKAAGKSIyeylnerleqlaeekglplayltrDLHVLPDFHGNRSPLADPTLRGMISG 405
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 569009727 411 LTQFTNKCHIA---FAALEAVCFQTREILDAMNRdCGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPET 482
Cdd:cd07782 406 LTLDTSLDDLAllyLATLQALAYGTRHIIEAMNA-AGHKIDTIFMCGGLSKNPLFVQLHADVTGCPVVLPKEPEA 479
|
|
| ASKHA_NBD_FGGY_RhaB-like |
cd07771 |
nucleotide-binding domain (NBD) of rhamnulokinase (RhaB) and similar proteins; Rhamnulokinase ... |
144-475 |
2.39e-15 |
|
nucleotide-binding domain (NBD) of rhamnulokinase (RhaB) and similar proteins; Rhamnulokinase (EC 2.7.1.5), also known as L-rhamnulose kinase, ATP:L-rhamnulose phosphotransferase, L-rhamnulose 1-kinase, or rhamnulose kinase, is an enzyme involved in the second step in rhamnose catabolism. It catalyzes the ATP-dependent phosphorylation of L-rhamnulose to produce L-rhamnulose-1-phosphate and ADP. Rhamnulokinase exists as a monomer composed of two large domains. The ATP binding site is located in the cleft between the two domains. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of divalent Mg2+ or Mn2+ is required for catalysis. The subfamily also includes Streptococcus pneumoniae L-fuculose k fuculose Kinase inase (FcsK) that uses ATP to phosphorylate fuculose creating fuculose-1-phosphate, and Alkalihalobacillus clausii bifunctional enzyme RhaA/RhaB. Members of this subfamily belong to the FGGY family of carbohydrate kinases.
Pssm-ID: 466791 [Multi-domain] Cd Length: 460 Bit Score: 78.72 E-value: 2.39e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 144 DLRTQSTVENLSKRIPGNNNFvkSKTGLPLSTYFSAVKLRWLldnvkkvqeaVEENRALFGTIDSWLI------WSLTGG 217
Cdd:cd07771 98 DPRTEGMMEELFEKISKEELY--ERTGIQFQPINTLYQLYAL----------KKEGPELLERADKLLMlpdllnYLLTGE 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 218 IhggvhCTDVTNASRTMLFNIHSLEWDKELCEFFGIPMEILPNVRSSSEIYG-----LMKAGALEGVP-ISGCLGDQSAA 291
Cdd:cd07771 166 K-----VAEYTIASTTQLLDPRTKDWSEELLEKLGLPRDLFPPIVPPGTVLGtlkpeVAEELGLKGIPvIAVASHDTASA 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 292 LVGQMCFQDGQAkntygtgcFLLCNT----GhkcVFSEHGLLTTVAYKLGrdkpvyYALEGSVA--------IAGaviRW 359
Cdd:cd07771 241 VAAVPAEDEDAA--------FISSGTwsliG---VELDEPVITEEAFEAG------FTNEGGADgtirllknITG---LW 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 360 L----RDNL---GIIKSSEEIEKLAKEVgTSYGCYFVPAFSGLYAPywePSARGIICGLTQFTN------KCHIAFAALE 426
Cdd:cd07771 301 LlqecRREWeeeGKDYSYDELVALAEEA-PPFGAFIDPDDPRFLNP---GDMPEAIRAYCRETGqpvpesPGEIARCIYE 376
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 569009727 427 AVCFQTREILDAMNRDCGIPLSHLQVDGGMTSNKILMQLQADILYIPVV 475
Cdd:cd07771 377 SLALKYAKTIEELEELTGKRIDRIHIVGGGSRNALLCQLTADATGLPVI 425
|
|
| AraB |
COG1069 |
Ribulose kinase [Carbohydrate transport and metabolism]; |
5-486 |
4.92e-15 |
|
Ribulose kinase [Carbohydrate transport and metabolism];
Pssm-ID: 440687 [Multi-domain] Cd Length: 532 Bit Score: 77.85 E-value: 4.92e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 5 KKAVLGplvgaVDQGTSSTRFLVFNSKTAELLSHHQVEIKQ------EFPREGWVEQDPKEILQSVYECIektCEKLGQL 78
Cdd:COG1069 1 EKYVIG-----VDFGTDSVRAVVVDAADGEELASAVHPYPRwviglyLPPPPDQARQHPLDYLEALEAAV---REALAQA 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 79 NIDISNIKAIGVSNQRETTVVWDKvTGEPLynavaapvspgssvpvAVVPSGSSVPAAGASsVWLDLRTQSTVEnlskRI 158
Cdd:COG1069 73 GVDPADVVGIGVDATGCTPVPVDA-DGTPL----------------ALLPEFAENPHAMVI-LWKDHTAQEEAE----RI 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 159 pgnnNFVKSKTGLPLSTY---------FSAvKLRWLLdnvkkvqeavEENRALFGTIDS------WLIWSLTGGIHGGVh 223
Cdd:COG1069 131 ----NELAKARGEDYLRYvggiissewFWP-KILHLL----------REDPEVYEAADSfvelcdWITWQLTGSLKRSR- 194
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 224 CTdvtnASRTMLFNIHSLEWDKElcEFF---GIPMEILPNvRSSSEIYGL-MKAGAL-----------EGVPISGCLGDQ 288
Cdd:COG1069 195 CT----AGHKALWHAHEGGYPSE--EFFaalDPLLDGLAD-RLGTEIYPLgEPAGTLtaewaarlglpPGTAVAVGAIDA 267
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 289 SAALVGQMCFQDGQ-AKNtYGT-GCFLLCNTGHKC-------VFSehGLLttvayklgrdkPVYYALEGSVAIAGAVIRW 359
Cdd:COG1069 268 HAGAVGAGGVEPGTlVKV-MGTsTCHMLVSPEERFvpgicgqVDG--SIV-----------PGMWGYEAGQSAVGDIFAW 333
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 360 LRDNLGiikSSEEIEKLAKEVGTS----------------YGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFA 423
Cdd:COG1069 334 FVRLLV---PPLEYEKEAEERGISlhpllteeaaklppgeSGLHALDWFNGNRSPLADQRLKGVILGLTLGTDAEDIYRA 410
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 569009727 424 ALEAVCFQTREILDAMNrDCGIPLSHLQVDGG-MTSNKILMQLQADILYIPVVKPSMPETTALG 486
Cdd:COG1069 411 LVEATAFGTRAIIERFE-EEGVPIDEIIACGGiATKNPLVMQIYADVTGRPIKVAASEQACALG 473
|
|
| PRK10939 |
PRK10939 |
autoinducer-2 (AI-2) kinase; Provisional |
15-286 |
7.94e-08 |
|
autoinducer-2 (AI-2) kinase; Provisional
Pssm-ID: 182853 [Multi-domain] Cd Length: 520 Bit Score: 55.01 E-value: 7.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 15 AVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPR-EGWVEQDPKEILQSVYECIEktcEKLGQLNIDISNIKAIGVSNQ 93
Cdd:PRK10939 7 ALDAGTGSIRAVIFDLNGNQIAVGQAEWRHLAVPDvPGSMEFDLEKNWQLACQCIR---QALQKAGIPASDIAAVSATSM 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 94 RETTVVWDKvTGEPLYnAVAApvspgssvpvavvpsgssvpaagassvwLDLRTQSTVENLSKRIPGNNNFVKSKTGLPL 173
Cdd:PRK10939 84 REGIVLYDR-NGTEIW-ACAN----------------------------VDARASREVSELKELHNNFEEEVYRCSGQTL 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 174 StyFSAV-KLRWLldnvKKVQEAVEENRALFGTIDSWLIWSLTGGIhggvhCTDVTNASRTMLFNIHSLEWDKELCEFFG 252
Cdd:PRK10939 134 A--LGALpRLLWL----AHHRPDIYRQAHTITMISDWIAYMLSGEL-----AVDPSNAGTTGLLDLVTRDWDPALLEMAG 202
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 569009727 253 IPMEILPNVRSSSEIYGLMKA------GALEGVPI--------SGCLG 286
Cdd:PRK10939 203 LRADILPPVKETGTVLGHVTAkaaaetGLRAGTPVvmgggdvqLGCLG 250
|
|
| ASKHA_NBD_FGGY_MPA43-like |
cd07778 |
nucleotide-binding domain (NBD) of Saccharomyces cerevisiae protein MPA43 and similar proteins; ... |
16-476 |
1.22e-06 |
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nucleotide-binding domain (NBD) of Saccharomyces cerevisiae protein MPA43 and similar proteins; This subfamily contains a group of uncharacterized proteins with similarity to Saccharomyces cerevisiae protein MPA43. They belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.
Pssm-ID: 466797 [Multi-domain] Cd Length: 544 Bit Score: 51.25 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 16 VDQGTSSTRFLVFNSKTaELLSHHQVEI-KQEFPREGW-VEQDPKEILQSVYECIEKTCEKLGQLNIDISNIKA---IGV 90
Cdd:cd07778 5 IDVGSTSVRIGIFDYHG-TLLATSERPIsYKQDPKDLWfVTQSSTEIWKAIKTALKELIEELSDYIVSGIGVSAtcsMVV 83
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90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 91 SNQRETTVVWdkvtgEPLynavaaPVSPGSSVPvavvpsGSSVpaagasSVWLDLRTQSTVENLskripgNNNFVKSKTG 170
Cdd:cd07778 84 MQRDSDTSYL-----VPY------NVIHEKSNP------DQDI------IFWMDHRASEETQWL------NNILPDDILD 134
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170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 171 LPLSTYF---SAVKLRWLLDNVKkvqEAVEENRALFGTIDsWLIWSL-TGGIHGGVhcTDVTNASRTMLFNIHSLE-WDK 245
Cdd:cd07778 135 YLGGGFIpemAIPKLKYLIDLIK---EDTFKKLEVFDLHD-WISYMLaTNLGHSNI--VPVNAPPSIGIGIDGSLKgWSK 208
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250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 246 ELCEFFGIPMEILPNVRSSSEIYGLMKAG-----------ALEGVPIS-----GCLgDQSAALVGQMC---FQDGQAKNT 306
Cdd:cd07778 209 DFYSKLKISTKVCNVGNTFKEAPPLPYAGipigkvnvilaSYLGIDKStvvghGCI-DCYAGWFSTFAaakTLDTTLFMV 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 307 YGTG-CFLLcntGHKCV-----------FSEhgllttvaykLGRDKPVYyalEGSVAIAG-----------AVIRWLRDN 363
Cdd:cd07778 288 AGTStCFLY---ATSSSqvgpipgiwgpFDQ----------LLKNYSVY---EGGQSATGklieklfnshpAIIELLKSD 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 364 LGIIKSSEE-IEKLAKEVGTS----YGCYFvpaFSGLYA----PYWEPSARGIICGLTQFTNKCHIAF---AALEAVCFQ 431
Cdd:cd07778 352 ANFFETVEEkIDKYERLLGQSihylTRHMF---FYGDYLgnrtPYNDPNMSGSFIGESTDSSLTDLVLkyiLILEFLAFQ 428
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 569009727 432 TREILDAMNRDCgIPLSHLQVDGGMTSNKILMQLQADILYIPVVK 476
Cdd:cd07778 429 TKLIIDNFQKEK-IIIQKVVISGSQAKNARLLQLLSTVLSKIHII 472
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| PRK04123 |
PRK04123 |
ribulokinase; Provisional |
405-486 |
2.29e-04 |
|
ribulokinase; Provisional
Pssm-ID: 235221 [Multi-domain] Cd Length: 548 Bit Score: 44.07 E-value: 2.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009727 405 RGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMnRDCGIPLSHLQVDGGM-TSNKILMQLQADILYIPV-VKPSmPET 482
Cdd:PRK04123 398 KGVITGLTLGTDAPDIYRALIEATAFGTRAIMECF-EDQGVPVEEVIAAGGIaRKNPVLMQIYADVLNRPIqVVAS-DQC 475
|
....
gi 569009727 483 TALG 486
Cdd:PRK04123 476 PALG 479
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