View
Concise Results
Standard Results
Full Results
centrosome-associated protein 350 isoform X6 [Mus musculus]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
CAP_GLY
pfam01302 CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ...
2490-2554
1.74e-29
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain]
Cd Length: 65
Bit Score: 112.88
E-value: 1.74e-29
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568909730 2490 I GDRV LIGSVQP GT L R FK G ETD FA K G F W A GVELD K P E G N N N G TYD G IV YF V C KD KHG I F AP P Q K I 2554
Cdd:pfam01302 1 V GDRV EVPGGRR GT V R YV G PVP FA P G V W V GVELD E P V G K N D G SVK G VR YF E C PP KHG V F VR P S K V 65
NIP100 super family
cl34954 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ...
2490-2767
1.17e-13
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
COG5244 :Pssm-ID: 227569 [Multi-domain]
Cd Length: 669
Bit Score: 77.03
E-value: 1.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2490 IG DRVL I G S v QP GT L RF K G E T D F AK G F W A G V ELD K P E G N N N G TYD G IV YF V CK DK HGIF AP P QKI S H L LE N FDDTD I NED 2569
Cdd:COG5244 6 VN DRVL L G D - KF GT V RF I G K T K F KD G I W I G L ELD D P V G K N D G SVN G VR YF H CK KR HGIF IR P DDD S L L NG N AAYEK I KGG 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2570 EESY S DEQYQPYNQE Q KDIKCLKDR E NNIAEYFC E KSLPSMHNTDASVDKD R SL N I E T D TSEVL -- E VHGHQQ P SVDP -- 2645
Cdd:COG5244 85 LVCE S KGMDKDGEIK Q ENHEDRIHF E ESKIRRLE E TIEALKSTEKEEIVEL R RE N E E L D KINLS lr E RISSEE P ELNK dg 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2646 - LI SY K E N K VL V SDATES V paaagaat S D NTFSGESKQQQ L AEKEENFY S Q V L E KPSTPLL D L L TREKNQ L EAQLKSSIS 2724
Cdd:COG5244 165 s KL SY D E L K EF V EESRVQ V -------- Y D MVELVSDISET L NRNGSIQR S S V R E CERSNIH D V L FLVNGI L DGVIDELNG 236
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 568909730 2725 E EKKSKQ QL ET ------ VSLLTD S L L QVFVKDTV S QLQQ V KKARN E KI Q 2767
Cdd:COG5244 237 E LERLRR QL VS lmsshg IEVEEN S R L KATLEKFQ S LELK V NTLQE E LY Q 285
PTZ00121 super family
cl31754 MAEBL; Provisional
1336-1981
1.53e-06
MAEBL; Provisional
PTZ00121 :Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 54.38
E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1336 E SV R QLSD V ERVRGIAL A QQ esvs LAQIIK A QQQRH ER DLALLKLKAEQEAL E CQRQL EE TRNK taqvh AE SLQQVVK s Q 1415
Cdd:PTZ00121 1179 E AA R KAEE V RKAEELRK A ED ---- ARKAEA A RKAEE ER KAEEARKAEDAKKA E AVKKA EE AKKD ----- AE EAKKAEE - E 1248
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1416 R EVT E VLQEATCKI A AQQSET A RLTTDA AR QIC E MAELTRTHL AD AITTSGVPLATLYDHQRQHFPDFMRKLRT KAE TDS 1495
Cdd:PTZ00121 1249 R NNE E IRKFEEARM A HFARRQ A AIKAEE AR KAD E LKKAEEKKK AD EAKKAEEKKKADEAKKKAEEAKKADEAKK KAE EAK 1328
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1496 FRISHSASHSQSKEG A VDSKRQKFSPSR D SYSESSRYKSHDYRSSSGSSRQDSPSVPPSK E NE K pfhgekmess V DE QLQ 1575
Cdd:PTZ00121 1329 KKADAAKKKAEEAKK A AEAAKAEAEAAA D EAEAAEEKAEAAEKKKEEAKKKADAAKKKAE E KK K ---------- A DE AKK 1398
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1576 T A AD D SLRS D SIPSLPDE K DS tsi A T E YSL K FD E SMTE DE IEE K SFRSLLPS E SHRRFNME KK RGHHDDSD E D A SPDKT A 1655
Cdd:PTZ00121 1399 K A EE D KKKA D ELKKAAAA K KK --- A D E AKK K AE E KKKA DE AKK K AEEAKKAD E AKKKAEEA KK AEEAKKKA E E A KKADE A 1475
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1656 LSSTK E lsmpf SGGQ D SFS K FTM E MVR qym K EE E VRA A HQSSLLRLRE K ALK E KT KA E lawl E HQ K KHLRD K GEDD K MPP 1735
Cdd:PTZ00121 1476 KKKAE E ----- AKKA D EAK K KAE E AKK --- K AD E AKK A AEAKKKADEA K KAE E AK KA D ---- E AK K AEEAK K ADEA K KAE 1543
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1736 LR KK QRG L LLRLQQE KAE I K RLQ E AN K A A RKERQLI L KQQ EE IERIRQTT I KLQE KL KSAGE K KLGSL A DDD E AEDN KA A 1815
Cdd:PTZ00121 1544 EK KK ADE L KKAEELK KAE E K KKA E EA K K A EEDKNMA L RKA EE AKKAEEAR I EEVM KL YEEEK K MKAEE A KKA E EAKI KA E 1623
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1816 SPGPPGL E TRSPSPISISSS E TSSIMQK LK smrs RMD E KFLT K REQ --- K LMQRRQH AEE LLE wkrrld AEE A E IQQM E K 1892
Cdd:PTZ00121 1624 ELKKAEE E KKKVEQLKKKEA E EKKKAEE LK ---- KAE E ENKI K AAE eak K AEEDKKK AEE AKK ------ AEE D E KKAA E A 1693
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1893 QALA A WDKELVKPRTP K KEQ E SQRT E QKGI A S EE GSPMPSYSPRNS E scip ED LGSPSDLCVPS E ARVQAQPGSP E HSTL 1972
Cdd:PTZ00121 1694 LKKE A EEAKKAEELKK K EAE E KKKA E ELKK A E EE NKIKAEEAKKEA E ---- ED KKKAEEAKKDE E EKKKIAHLKK E EEKK 1769
....*....
gi 568909730 1973 T EE MVFSQ E 1981
Cdd:PTZ00121 1770 A EE IRKEK E 1778
COG5022 super family
cl34868 Myosin heavy chain [General function prediction only];
2054-2334
3.01e-03
Myosin heavy chain [General function prediction only];
COG5022 :Pssm-ID: 227355 [Multi-domain]
Cd Length: 1463
Bit Score: 43.53
E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2054 LK DE L RKRKSVVEQLKREQRKRQKER L KAQ E AS L LRQL E T Y DEFI KK TEGELSQDLDISPTS K FQM K T L SSV S EKPKI kp 2133
Cdd:COG5022 933 LK KL L NNIDLEEGPSIEYVKLPELNK L HEV E SK L KETS E E Y EDLL KK STILVREGNKANSEL K NFK K E L AEL S KQYGA -- 1010
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2134 hp L HR S E taktw K SVT E SERSRGS L A S iaehv D S SLSC SE RA i SERS L SAYA K RGVE L DSRIEH LQA SSPD L SS R KAQTE 2213
Cdd:COG5022 1011 -- L QE S T ----- K QLK E LPVEVAE L Q S ----- A S KIIS SE ST - ELSI L KPLQ K LKGL L LLENNQ LQA RYKA L KL R RENSL 1077
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2214 SR D S ---- LES APS L S --- P VK E L NAPD R IY d V SE A KAEDT --- SQKSEIQEI E SM K LE S SE V EDACCKQSGG S EVL L K L 2283
Cdd:COG5022 1078 LD D K qlyq LES TEN L L kti N VK D L EVTN R NL - V KP A NVLQF iva QMIKLNLLQ E IS K FL S QL V NTLEPVFQKL S VLQ L E L 1156
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2284 D LASETLSSKE LPS D --- S A NVQQD ------ L D KPATET S H E KEE a LK EDQSNHSTDDR S 2334
Cdd:COG5022 1157 D GLFWEANLEA LPS P ppf A A LSEKR lyqsal Y D EKSKLS S S E VND - LK NELIALFSKIF S 1215
Name
Accession
Description
Interval
E-value
CAP_GLY
pfam01302 CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ...
2490-2554
1.74e-29
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain]
Cd Length: 65
Bit Score: 112.88
E-value: 1.74e-29
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568909730 2490 I GDRV LIGSVQP GT L R FK G ETD FA K G F W A GVELD K P E G N N N G TYD G IV YF V C KD KHG I F AP P Q K I 2554
Cdd:pfam01302 1 V GDRV EVPGGRR GT V R YV G PVP FA P G V W V GVELD E P V G K N D G SVK G VR YF E C PP KHG V F VR P S K V 65
CAP_GLY
smart01052 Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ...
2490-2555
7.31e-26
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain]
Cd Length: 68
Bit Score: 102.66
E-value: 7.31e-26
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568909730 2490 I GDRV LI - G SVQP GT L R FK G E T D FA K G F W A GVELD K P E - G N N N G TYD G IV YF V C KD KHGIF AP P Q K IS 2555
Cdd:smart01052 1 V GDRV EV g G GGRR GT V R YV G P T P FA P G V W V GVELD E P L r G K N D G SVK G VR YF E C PP KHGIF VR P S K VE 68
NIP100
COG5244 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ...
2490-2767
1.17e-13
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain]
Cd Length: 669
Bit Score: 77.03
E-value: 1.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2490 IG DRVL I G S v QP GT L RF K G E T D F AK G F W A G V ELD K P E G N N N G TYD G IV YF V CK DK HGIF AP P QKI S H L LE N FDDTD I NED 2569
Cdd:COG5244 6 VN DRVL L G D - KF GT V RF I G K T K F KD G I W I G L ELD D P V G K N D G SVN G VR YF H CK KR HGIF IR P DDD S L L NG N AAYEK I KGG 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2570 EESY S DEQYQPYNQE Q KDIKCLKDR E NNIAEYFC E KSLPSMHNTDASVDKD R SL N I E T D TSEVL -- E VHGHQQ P SVDP -- 2645
Cdd:COG5244 85 LVCE S KGMDKDGEIK Q ENHEDRIHF E ESKIRRLE E TIEALKSTEKEEIVEL R RE N E E L D KINLS lr E RISSEE P ELNK dg 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2646 - LI SY K E N K VL V SDATES V paaagaat S D NTFSGESKQQQ L AEKEENFY S Q V L E KPSTPLL D L L TREKNQ L EAQLKSSIS 2724
Cdd:COG5244 165 s KL SY D E L K EF V EESRVQ V -------- Y D MVELVSDISET L NRNGSIQR S S V R E CERSNIH D V L FLVNGI L DGVIDELNG 236
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 568909730 2725 E EKKSKQ QL ET ------ VSLLTD S L L QVFVKDTV S QLQQ V KKARN E KI Q 2767
Cdd:COG5244 237 E LERLRR QL VS lmsshg IEVEEN S R L KATLEKFQ S LELK V NTLQE E LY Q 285
PTZ00121
PTZ00121 MAEBL; Provisional
1336-1981
1.53e-06
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 54.38
E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1336 E SV R QLSD V ERVRGIAL A QQ esvs LAQIIK A QQQRH ER DLALLKLKAEQEAL E CQRQL EE TRNK taqvh AE SLQQVVK s Q 1415
Cdd:PTZ00121 1179 E AA R KAEE V RKAEELRK A ED ---- ARKAEA A RKAEE ER KAEEARKAEDAKKA E AVKKA EE AKKD ----- AE EAKKAEE - E 1248
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1416 R EVT E VLQEATCKI A AQQSET A RLTTDA AR QIC E MAELTRTHL AD AITTSGVPLATLYDHQRQHFPDFMRKLRT KAE TDS 1495
Cdd:PTZ00121 1249 R NNE E IRKFEEARM A HFARRQ A AIKAEE AR KAD E LKKAEEKKK AD EAKKAEEKKKADEAKKKAEEAKKADEAKK KAE EAK 1328
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1496 FRISHSASHSQSKEG A VDSKRQKFSPSR D SYSESSRYKSHDYRSSSGSSRQDSPSVPPSK E NE K pfhgekmess V DE QLQ 1575
Cdd:PTZ00121 1329 KKADAAKKKAEEAKK A AEAAKAEAEAAA D EAEAAEEKAEAAEKKKEEAKKKADAAKKKAE E KK K ---------- A DE AKK 1398
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1576 T A AD D SLRS D SIPSLPDE K DS tsi A T E YSL K FD E SMTE DE IEE K SFRSLLPS E SHRRFNME KK RGHHDDSD E D A SPDKT A 1655
Cdd:PTZ00121 1399 K A EE D KKKA D ELKKAAAA K KK --- A D E AKK K AE E KKKA DE AKK K AEEAKKAD E AKKKAEEA KK AEEAKKKA E E A KKADE A 1475
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1656 LSSTK E lsmpf SGGQ D SFS K FTM E MVR qym K EE E VRA A HQSSLLRLRE K ALK E KT KA E lawl E HQ K KHLRD K GEDD K MPP 1735
Cdd:PTZ00121 1476 KKKAE E ----- AKKA D EAK K KAE E AKK --- K AD E AKK A AEAKKKADEA K KAE E AK KA D ---- E AK K AEEAK K ADEA K KAE 1543
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1736 LR KK QRG L LLRLQQE KAE I K RLQ E AN K A A RKERQLI L KQQ EE IERIRQTT I KLQE KL KSAGE K KLGSL A DDD E AEDN KA A 1815
Cdd:PTZ00121 1544 EK KK ADE L KKAEELK KAE E K KKA E EA K K A EEDKNMA L RKA EE AKKAEEAR I EEVM KL YEEEK K MKAEE A KKA E EAKI KA E 1623
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1816 SPGPPGL E TRSPSPISISSS E TSSIMQK LK smrs RMD E KFLT K REQ --- K LMQRRQH AEE LLE wkrrld AEE A E IQQM E K 1892
Cdd:PTZ00121 1624 ELKKAEE E KKKVEQLKKKEA E EKKKAEE LK ---- KAE E ENKI K AAE eak K AEEDKKK AEE AKK ------ AEE D E KKAA E A 1693
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1893 QALA A WDKELVKPRTP K KEQ E SQRT E QKGI A S EE GSPMPSYSPRNS E scip ED LGSPSDLCVPS E ARVQAQPGSP E HSTL 1972
Cdd:PTZ00121 1694 LKKE A EEAKKAEELKK K EAE E KKKA E ELKK A E EE NKIKAEEAKKEA E ---- ED KKKAEEAKKDE E EKKKIAHLKK E EEKK 1769
....*....
gi 568909730 1973 T EE MVFSQ E 1981
Cdd:PTZ00121 1770 A EE IRKEK E 1778
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
1682-1926
1.07e-04
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 48.01
E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1682 R QYMK E E E VRA A HQSS L LRLR E KALK E KTKA E LAWL E HQKKHLRDKG E DDK mpp LRKKQRG LL LR L QQEKAE I K RL Q E AN 1761
Cdd:COG1196 235 R ELEA E L E ELE A ELEE L EAEL E ELEA E LAEL E AELE E LRLELEELEL E LEE --- AQAEEYE LL AE L ARLEQD I A RL E E RR 311
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1762 KAARKERQ ---- LILKQQ EE I E RIRQTTIK L Q E K L KS A G E KKLGSL A DDD EAE DNKAA spgppg L E TRSPSPISISSSET 1837
Cdd:COG1196 312 RELEERLE elee ELAELE EE L E ELEEELEE L E E E L EE A E E ELEEAE A ELA EAE EALLE ------ A E AELAEAEEELEELA 385
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1838 SSIMQK L KSMRS - RMDEKF L TKR E QK L MQ R R - QHA EEL L E WKRR L DAE E A E IQQM E KQALA A WDK E L vkprtpk KEQ E SQ 1915
Cdd:COG1196 386 EELLEA L RAAAE l AAQLEE L EEA E EA L LE R L e RLE EEL E E LEEA L AEL E E E EEEE E EALEE A AEE E A ------- ELE E EE 458
250
....*....|.
gi 568909730 1916 RTEQKGI A SEE 1926
Cdd:COG1196 459 EALLELL A ELL 469
COG5022
COG5022 Myosin heavy chain [General function prediction only];
2054-2334
3.01e-03
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain]
Cd Length: 1463
Bit Score: 43.53
E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2054 LK DE L RKRKSVVEQLKREQRKRQKER L KAQ E AS L LRQL E T Y DEFI KK TEGELSQDLDISPTS K FQM K T L SSV S EKPKI kp 2133
Cdd:COG5022 933 LK KL L NNIDLEEGPSIEYVKLPELNK L HEV E SK L KETS E E Y EDLL KK STILVREGNKANSEL K NFK K E L AEL S KQYGA -- 1010
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2134 hp L HR S E taktw K SVT E SERSRGS L A S iaehv D S SLSC SE RA i SERS L SAYA K RGVE L DSRIEH LQA SSPD L SS R KAQTE 2213
Cdd:COG5022 1011 -- L QE S T ----- K QLK E LPVEVAE L Q S ----- A S KIIS SE ST - ELSI L KPLQ K LKGL L LLENNQ LQA RYKA L KL R RENSL 1077
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2214 SR D S ---- LES APS L S --- P VK E L NAPD R IY d V SE A KAEDT --- SQKSEIQEI E SM K LE S SE V EDACCKQSGG S EVL L K L 2283
Cdd:COG5022 1078 LD D K qlyq LES TEN L L kti N VK D L EVTN R NL - V KP A NVLQF iva QMIKLNLLQ E IS K FL S QL V NTLEPVFQKL S VLQ L E L 1156
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2284 D LASETLSSKE LPS D --- S A NVQQD ------ L D KPATET S H E KEE a LK EDQSNHSTDDR S 2334
Cdd:COG5022 1157 D GLFWEANLEA LPS P ppf A A LSEKR lyqsal Y D EKSKLS S S E VND - LK NELIALFSKIF S 1215
Name
Accession
Description
Interval
E-value
CAP_GLY
pfam01302 CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ...
2490-2554
1.74e-29
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain]
Cd Length: 65
Bit Score: 112.88
E-value: 1.74e-29
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568909730 2490 I GDRV LIGSVQP GT L R FK G ETD FA K G F W A GVELD K P E G N N N G TYD G IV YF V C KD KHG I F AP P Q K I 2554
Cdd:pfam01302 1 V GDRV EVPGGRR GT V R YV G PVP FA P G V W V GVELD E P V G K N D G SVK G VR YF E C PP KHG V F VR P S K V 65
CAP_GLY
smart01052 Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ...
2490-2555
7.31e-26
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain]
Cd Length: 68
Bit Score: 102.66
E-value: 7.31e-26
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568909730 2490 I GDRV LI - G SVQP GT L R FK G E T D FA K G F W A GVELD K P E - G N N N G TYD G IV YF V C KD KHGIF AP P Q K IS 2555
Cdd:smart01052 1 V GDRV EV g G GGRR GT V R YV G P T P FA P G V W V GVELD E P L r G K N D G SVK G VR YF E C PP KHGIF VR P S K VE 68
NIP100
COG5244 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ...
2490-2767
1.17e-13
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain]
Cd Length: 669
Bit Score: 77.03
E-value: 1.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2490 IG DRVL I G S v QP GT L RF K G E T D F AK G F W A G V ELD K P E G N N N G TYD G IV YF V CK DK HGIF AP P QKI S H L LE N FDDTD I NED 2569
Cdd:COG5244 6 VN DRVL L G D - KF GT V RF I G K T K F KD G I W I G L ELD D P V G K N D G SVN G VR YF H CK KR HGIF IR P DDD S L L NG N AAYEK I KGG 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2570 EESY S DEQYQPYNQE Q KDIKCLKDR E NNIAEYFC E KSLPSMHNTDASVDKD R SL N I E T D TSEVL -- E VHGHQQ P SVDP -- 2645
Cdd:COG5244 85 LVCE S KGMDKDGEIK Q ENHEDRIHF E ESKIRRLE E TIEALKSTEKEEIVEL R RE N E E L D KINLS lr E RISSEE P ELNK dg 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2646 - LI SY K E N K VL V SDATES V paaagaat S D NTFSGESKQQQ L AEKEENFY S Q V L E KPSTPLL D L L TREKNQ L EAQLKSSIS 2724
Cdd:COG5244 165 s KL SY D E L K EF V EESRVQ V -------- Y D MVELVSDISET L NRNGSIQR S S V R E CERSNIH D V L FLVNGI L DGVIDELNG 236
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 568909730 2725 E EKKSKQ QL ET ------ VSLLTD S L L QVFVKDTV S QLQQ V KKARN E KI Q 2767
Cdd:COG5244 237 E LERLRR QL VS lmsshg IEVEEN S R L KATLEKFQ S LELK V NTLQE E LY Q 285
PTZ00121
PTZ00121 MAEBL; Provisional
1336-1981
1.53e-06
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 54.38
E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1336 E SV R QLSD V ERVRGIAL A QQ esvs LAQIIK A QQQRH ER DLALLKLKAEQEAL E CQRQL EE TRNK taqvh AE SLQQVVK s Q 1415
Cdd:PTZ00121 1179 E AA R KAEE V RKAEELRK A ED ---- ARKAEA A RKAEE ER KAEEARKAEDAKKA E AVKKA EE AKKD ----- AE EAKKAEE - E 1248
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1416 R EVT E VLQEATCKI A AQQSET A RLTTDA AR QIC E MAELTRTHL AD AITTSGVPLATLYDHQRQHFPDFMRKLRT KAE TDS 1495
Cdd:PTZ00121 1249 R NNE E IRKFEEARM A HFARRQ A AIKAEE AR KAD E LKKAEEKKK AD EAKKAEEKKKADEAKKKAEEAKKADEAKK KAE EAK 1328
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1496 FRISHSASHSQSKEG A VDSKRQKFSPSR D SYSESSRYKSHDYRSSSGSSRQDSPSVPPSK E NE K pfhgekmess V DE QLQ 1575
Cdd:PTZ00121 1329 KKADAAKKKAEEAKK A AEAAKAEAEAAA D EAEAAEEKAEAAEKKKEEAKKKADAAKKKAE E KK K ---------- A DE AKK 1398
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1576 T A AD D SLRS D SIPSLPDE K DS tsi A T E YSL K FD E SMTE DE IEE K SFRSLLPS E SHRRFNME KK RGHHDDSD E D A SPDKT A 1655
Cdd:PTZ00121 1399 K A EE D KKKA D ELKKAAAA K KK --- A D E AKK K AE E KKKA DE AKK K AEEAKKAD E AKKKAEEA KK AEEAKKKA E E A KKADE A 1475
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1656 LSSTK E lsmpf SGGQ D SFS K FTM E MVR qym K EE E VRA A HQSSLLRLRE K ALK E KT KA E lawl E HQ K KHLRD K GEDD K MPP 1735
Cdd:PTZ00121 1476 KKKAE E ----- AKKA D EAK K KAE E AKK --- K AD E AKK A AEAKKKADEA K KAE E AK KA D ---- E AK K AEEAK K ADEA K KAE 1543
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1736 LR KK QRG L LLRLQQE KAE I K RLQ E AN K A A RKERQLI L KQQ EE IERIRQTT I KLQE KL KSAGE K KLGSL A DDD E AEDN KA A 1815
Cdd:PTZ00121 1544 EK KK ADE L KKAEELK KAE E K KKA E EA K K A EEDKNMA L RKA EE AKKAEEAR I EEVM KL YEEEK K MKAEE A KKA E EAKI KA E 1623
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1816 SPGPPGL E TRSPSPISISSS E TSSIMQK LK smrs RMD E KFLT K REQ --- K LMQRRQH AEE LLE wkrrld AEE A E IQQM E K 1892
Cdd:PTZ00121 1624 ELKKAEE E KKKVEQLKKKEA E EKKKAEE LK ---- KAE E ENKI K AAE eak K AEEDKKK AEE AKK ------ AEE D E KKAA E A 1693
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1893 QALA A WDKELVKPRTP K KEQ E SQRT E QKGI A S EE GSPMPSYSPRNS E scip ED LGSPSDLCVPS E ARVQAQPGSP E HSTL 1972
Cdd:PTZ00121 1694 LKKE A EEAKKAEELKK K EAE E KKKA E ELKK A E EE NKIKAEEAKKEA E ---- ED KKKAEEAKKDE E EKKKIAHLKK E EEKK 1769
....*....
gi 568909730 1973 T EE MVFSQ E 1981
Cdd:PTZ00121 1770 A EE IRKEK E 1778
PTZ00121
PTZ00121 MAEBL; Provisional
1567-2294
2.12e-06
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 53.99
E-value: 2.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1567 E SSV D EQLQTA A DDSLRSDS I PSLPDEKDSTSIATEYSL K FD E SMTE DE I ---- E E K SFRSLLPS E SHRRFNME KK RGHH 1642
Cdd:PTZ00121 1234 E AKK D AEEAKK A EEERNNEE I RKFEEARMAHFARRQAAI K AE E ARKA DE L kkae E K K KADEAKKA E EKKKADEA KK KAEE 1313
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1643 DDSDED A S pd K T A LSST K E lsmpfsgg Q D SFS K FTM E MVR -- QYM K E E EVR AA HQSSLLRLREK A LKE K TKAELAWLEHQ 1720
Cdd:PTZ00121 1314 AKKADE A K -- K K A EEAK K K -------- A D AAK K KAE E AKK aa EAA K A E AEA AA DEAEAAEEKAE A AEK K KEEAKKKADAA 1383
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1721 KK HLRD K GED D KMPPLRKKQRGLLLR L QQEK A EI K RLQ EA N K A A RKERQ lilkq QE E IERIRQTTI K LQ E KL K S A G E K K L 1800
Cdd:PTZ00121 1384 KK KAEE K KKA D EAKKKAEEDKKKADE L KKAA A AK K KAD EA K K K A EEKKK ----- AD E AKKKAEEAK K AD E AK K K A E E A K K 1458
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1801 GSL A DDDEA E DN KA ASPGPPGL E TRSPSPISISSS E TSSIMQKL K smrs RMD E KFLTKR E Q K LMQRRQH A E E LLEWKRRL 1880
Cdd:PTZ00121 1459 AEE A KKKAE E AK KA DEAKKKAE E AKKADEAKKKAE E AKKKADEA K ---- KAA E AKKKAD E A K KAEEAKK A D E AKKAEEAK 1534
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1881 D A E EA EIQQME K Q A laawd K EL V K PRTP KK EQ E SQRT E QKGI A S E E gspm PSYSP R NS E scipedlgspsdlcvps EA R v 1960
Cdd:PTZ00121 1535 K A D EA KKAEEK K K A ----- D EL K K AEEL KK AE E KKKA E EAKK A E E D ---- KNMAL R KA E ----------------- EA K - 1587
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1961 Q A QPGSP E HSTLTE E MVFSQEL E STSPSKHSPP K SCLSMSKQ E SS K ASHRTEGHCHLPV K SHQPCYSWSD E SLSMTQS E T 2040
Cdd:PTZ00121 1588 K A EEARI E EVMKLY E EEKKMKA E EAKKAEEAKI K AEELKKAE E EK K KVEQLKKKEAEEK K KAEELKKAEE E NKIKAAE E A 1667
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2041 TSDQS D IEGRIR A L K D E LRKR K SVVEQL K REQRKRQK E R LK AQ EA SLLRQL E T ydef I KK T E G E lsqdldispt S K FQMK 2120
Cdd:PTZ00121 1668 KKAEE D KKKAEE A K K A E EDEK K AAEALK K EAEEAKKA E E LK KK EA EEKKKA E E ---- L KK A E E E ---------- N K IKAE 1733
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2121 TLSSVS E KP K I K PHPLHRS E TA K TWKSVTES E RSRGSLASIA E hvdsslsc S E RA I S E RSLSAYA KR GV E L D SR I EHLQA 2200
Cdd:PTZ00121 1734 EAKKEA E ED K K K AEEAKKD E EE K KKIAHLKK E EEKKAEEIRK E -------- K E AV I E E ELDEEDE KR RM E V D KK I KDIFD 1805
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2201 SSPDL ssrkaqte SRDSL E SAPSLSPV KE L napd RIYDVS E AKAEDTS Q KS E IQEI E SM K LESSEV -- ED ACCKQSGGS E 2278
Cdd:PTZ00121 1806 NFANI -------- IEGGK E GNLVINDS KE M ---- EDSAIK E VADSKNM Q LE E ADAF E KH K FNKNNE ng ED GNKEADFNK E 1873
730
....*....|....*.
gi 568909730 2279 VL LK L D LAS E TLSSK E 2294
Cdd:PTZ00121 1874 KD LK E D DEE E IEEAD E 1889
PTZ00121
PTZ00121 MAEBL; Provisional
1634-2325
1.41e-05
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 51.30
E-value: 1.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1634 NM E KKRGHHD D S D E DA SP D KT A LSS T K E lsmpfsggqd S F S K FTMEMVRQYM K E EE V R A A HQSSLLRLREKALK E KT KAE 1713
Cdd:PTZ00121 1068 QD E GLKPSYK D F D F DA KE D NR A DEA T E E ---------- A F G K AEEAKKTETG K A EE A R K A EEAKKKAEDARKAE E AR KAE 1137
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1714 lawl EHQ K KHLRD K G ED D K MPPL - RK KQRGLLLRLQQEKAEI K RLQE A N KA ARKERQLI L KQQ E EIERIRQT ti KLQ E KL 1792
Cdd:PTZ00121 1138 ---- DAR K AEEAR K A ED A K RVEI a RK AEDARKAEEARKAEDA K KAEA A R KA EEVRKAEE L RKA E DARKAEAA -- RKA E EE 1211
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1793 KS A G E KK lgsladdd E AED N K A A SPGPPGL E TRSPSPISISSS E TSSIMQKL K SMRS RM DEKFLTKREQ K LMQR R Q h A E E 1872
Cdd:PTZ00121 1212 RK A E E AR -------- K AED A K K A EAVKKAE E AKKDAEEAKKAE E ERNNEEIR K FEEA RM AHFARRQAAI K AEEA R K - A D E 1282
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1873 L LEWKRRLD A E EA EIQQME K Q A LA A wdkelvkprt P KK EQ E SQRTEQKGIAS EE GSPMPSYSPRNS E scipedlgspsdl 1952
Cdd:PTZ00121 1283 L KKAEEKKK A D EA KKAEEK K K A DE A ---------- K KK AE E AKKADEAKKKA EE AKKKADAAKKKA E ------------- 1339
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1953 cvps EA RVQ A QPGSP E HSTLTE E MVFSQ E LESTSPS K HSPP K SCLSMS K QESSKASHRT E GH chlpv K SHQPCYSWS DE S 2032
Cdd:PTZ00121 1340 ---- EA KKA A EAAKA E AEAAAD E AEAAE E KAEAAEK K KEEA K KKADAA K KKAEEKKKAD E AK ----- K KAEEDKKKA DE L 1410
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2033 LSMTQSETTS D QSDIEGRIRALK DE LR K R --- KSVVEQL K R --- E QR K RQKERL KA Q EA SLLRQLETYD E FI KK TE g E LS 2106
Cdd:PTZ00121 1411 KKAAAAKKKA D EAKKKAEEKKKA DE AK K K aee AKKADEA K K kae E AK K AEEAKK KA E EA KKADEAKKKA E EA KK AD - E AK 1489
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2107 QDLDISPTSKFQM K T lssv SEKP K I K PHPLHRS E T AK TWKSVTES E RSRG sl A SI A EHVDSSLSCS E RAIS E RSLS A YA K 2186
Cdd:PTZ00121 1490 KKAEEAKKKADEA K K ---- AAEA K K K ADEAKKA E E AK KADEAKKA E EAKK -- A DE A KKAEEKKKAD E LKKA E ELKK A EE K 1563
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2187 RGV E LDSRI E HLQASSPDLSSRKAQT E SRDSL E SAPSLSPV K ELN A PD - RIYDVSEA KAE DTSQKS E IQEI -- ESM K L E S 2263
Cdd:PTZ00121 1564 KKA E EAKKA E EDKNMALRKAEEAKKA E EARIE E VMKLYEEE K KMK A EE a KKAEEAKI KAE ELKKAE E EKKK ve QLK K K E A 1643
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568909730 2264 S E VED A - CC K QSGGSEVLLKLDL A SETLSS K ELPSDSANVQQ D LD K P A TETSH E K EEA L K EDQ 2325
Cdd:PTZ00121 1644 E E KKK A e EL K KAEEENKIKAAEE A KKAEED K KKAEEAKKAEE D EK K A A EALKK E A EEA K K AEE 1706
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
1682-1926
1.07e-04
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 48.01
E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1682 R QYMK E E E VRA A HQSS L LRLR E KALK E KTKA E LAWL E HQKKHLRDKG E DDK mpp LRKKQRG LL LR L QQEKAE I K RL Q E AN 1761
Cdd:COG1196 235 R ELEA E L E ELE A ELEE L EAEL E ELEA E LAEL E AELE E LRLELEELEL E LEE --- AQAEEYE LL AE L ARLEQD I A RL E E RR 311
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1762 KAARKERQ ---- LILKQQ EE I E RIRQTTIK L Q E K L KS A G E KKLGSL A DDD EAE DNKAA spgppg L E TRSPSPISISSSET 1837
Cdd:COG1196 312 RELEERLE elee ELAELE EE L E ELEEELEE L E E E L EE A E E ELEEAE A ELA EAE EALLE ------ A E AELAEAEEELEELA 385
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1838 SSIMQK L KSMRS - RMDEKF L TKR E QK L MQ R R - QHA EEL L E WKRR L DAE E A E IQQM E KQALA A WDK E L vkprtpk KEQ E SQ 1915
Cdd:COG1196 386 EELLEA L RAAAE l AAQLEE L EEA E EA L LE R L e RLE EEL E E LEEA L AEL E E E EEEE E EALEE A AEE E A ------- ELE E EE 458
250
....*....|.
gi 568909730 1916 RTEQKGI A SEE 1926
Cdd:COG1196 459 EALLELL A ELL 469
PTZ00108
PTZ00108 DNA topoisomerase 2-like protein; Provisional
1765-2110
2.02e-03
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain]
Cd Length: 1388
Bit Score: 43.88
E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1765 RKE RQ L ILKQQ E E --------- I ERIRQTTIKLQEKL K SAGE K --- KLG SLADD D E ---- A E DNK A ASPGPPGLETRSPS 1828
Cdd:PTZ00108 996 RKE YL L GKLER E L arlsnkvrf I KHVINGELVITNAK K KDLV K elk KLG YVRFK D I ikkk S E KIT A EEEEGAEEDDEADD 1075
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1829 PISISSSETSSIMQK L K SM R -- S RMD EK FL t K REQK L MQRRQHA E E L LE ------ W KRR LD AE E AEIQQM E KQALAAWD K 1900
Cdd:PTZ00108 1076 EDDEEELGAAVSYDY L L SM P iw S LTK EK VE - K LNAE L EKKEKEL E K L KN ttpkdm W LED LD KF E EALEEQ E EVEEKEIA K 1154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1901 E L - V K PR T PK K EQESQRTEQ K GIASEEGS -------- PMPSYSPRNSE S CIPED L GSPS D LCVPSEARVQAQPGSPEHST 1971
Cdd:PTZ00108 1155 E Q r L K SK T KG K ASKLRKPKL K KKEKKKKK ssadkskk ASVVGNSKRVD S DEKRK L DDKP D NKKSNSSGSDQEDDEEQKTK 1234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1972 LTEEM V FSQELESTSP SK H S PPKSCL S MSKQESSKASHRTEGHCHLPVK S HQ P CYSWS D ESLSMTQSETTS ---- DQSDI 2047
Cdd:PTZ00108 1235 PKKSS V KRLKSKKNNS SK S S EDNDEF S SDDLSKEGKPKNAPKRVSAVQY S PP P PSKRP D GESNGGSKPSSP tkkk VKKRL 1314
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568909730 2048 EG RIR ALK DELRKR K SVVEQL K REQ R ----- KR Q KE RL KAQEASLLRQLETY D EFIKKTEGELSQ D LD 2110
Cdd:PTZ00108 1315 EG SLA ALK KKKKSE K KTARKK K SKT R vkqas AS Q SS RL LRRPRKKKSDSSSE D DDDSEVDDSEDE D DE 1382
PRK12704
PRK12704 phosphodiesterase; Provisional
1679-1781
2.56e-03
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain]
Cd Length: 520
Bit Score: 43.23
E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 1679 E MVRQYMK E EEVR A AH -- QSS LL RLR E KAL K EKTKA E ------ LAW L EHQK K H L RD K G E -- D D K MPP L R K KQR glll R L Q 1748
Cdd:PRK12704 38 E EAKRILE E AKKE A EA ik KEA LL EAK E EIH K LRNEF E kelrer RNE L QKLE K R L LQ K E E nl D R K LEL L E K REE ---- E L E 113
90 100 110
....*....|....*....|....*....|....
gi 568909730 1749 QEKA E IKRL Q EANKAARK E - RQ LI LK Q QE E I ERI 1781
Cdd:PRK12704 114 KKEK E LEQK Q QELEKKEE E l EE LI EE Q LQ E L ERI 147
COG5022
COG5022 Myosin heavy chain [General function prediction only];
2054-2334
3.01e-03
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain]
Cd Length: 1463
Bit Score: 43.53
E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2054 LK DE L RKRKSVVEQLKREQRKRQKER L KAQ E AS L LRQL E T Y DEFI KK TEGELSQDLDISPTS K FQM K T L SSV S EKPKI kp 2133
Cdd:COG5022 933 LK KL L NNIDLEEGPSIEYVKLPELNK L HEV E SK L KETS E E Y EDLL KK STILVREGNKANSEL K NFK K E L AEL S KQYGA -- 1010
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2134 hp L HR S E taktw K SVT E SERSRGS L A S iaehv D S SLSC SE RA i SERS L SAYA K RGVE L DSRIEH LQA SSPD L SS R KAQTE 2213
Cdd:COG5022 1011 -- L QE S T ----- K QLK E LPVEVAE L Q S ----- A S KIIS SE ST - ELSI L KPLQ K LKGL L LLENNQ LQA RYKA L KL R RENSL 1077
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2214 SR D S ---- LES APS L S --- P VK E L NAPD R IY d V SE A KAEDT --- SQKSEIQEI E SM K LE S SE V EDACCKQSGG S EVL L K L 2283
Cdd:COG5022 1078 LD D K qlyq LES TEN L L kti N VK D L EVTN R NL - V KP A NVLQF iva QMIKLNLLQ E IS K FL S QL V NTLEPVFQKL S VLQ L E L 1156
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909730 2284 D LASETLSSKE LPS D --- S A NVQQD ------ L D KPATET S H E KEE a LK EDQSNHSTDDR S 2334
Cdd:COG5022 1157 D GLFWEANLEA LPS P ppf A A LSEKR lyqsal Y D EKSKLS S S E VND - LK NELIALFSKIF S 1215
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
