NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|578817982|ref|XP_006717383|]
View 

arrestin domain-containing protein 1 isoform X1 [Homo sapiens]

Protein Classification

arrestin family protein( domain architecture ID 10432288)

arrestin family protein with both N-terminal and C-terminal Ig-like beta-sandwich domains found in arrestin (S antigen); similar to Homo sapiens thioredoxin-interacting protein and arrestin domain-containing protein

CATH:  2.60.40.840
PubMed:  7720881|7833798
SCOP:  4007521

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Arrestin_C pfam02752
Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports ...
 186-308 3.54e-22

Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication with N-terminal domain.


:

Pssm-ID: 460676  Cd Length: 135  Bit Score: 92.00  E-value: 3.54e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578817982  186 KTGSVVLTASTDLRGYVVGQALQLHADVENQSGKDTSPVVASLLQKVSYKAK----RWIHDVRTIAEVEGAGVKAWRRAQ 261
Cdd:pfam02752   1 WSGKVSYSVSLPKKGYVPGETIPVTIEIDNQSKKKIKKIKISLVQQLTYKAKtplgESKREERVVAKEKNPGVAPGSKDK 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 578817982  262 WHEQILVPaLPQSALP---GCSLIHIDYYLQVSLKAP----EATVTLPVFIGNI 308
Cdd:pfam02752  81 WEKELQLQ-IPTDLPPsstKCKIIKVEYKLKVTVDLSgsasELRLELPITIGTS 133
Arrestin_N super family cl22903
Arrestin (or S-antigen), N-terminal domain; Ig-like beta-sandwich fold. Scop reports ...
 82-146 6.98e-12

Arrestin (or S-antigen), N-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication with C-terminal domain.


The actual alignment was detected with superfamily member pfam00339:

Pssm-ID: 451447  Cd Length: 148  Bit Score: 63.08  E-value: 6.98e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 578817982   82 DKGSLPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRAAIHTP-RFSKdhKCSLVFYILSPLNLN 146
Cdd:pfam00339  85 GQNKLPAGTHTFPFSFTLPPNCPSSFEGKHGGIRYEVKVTLDRPwKFNK--SFRRVFTVIPKLDLN 148
 
Name Accession Description Interval E-value
Arrestin_C pfam02752
Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports ...
 186-308 3.54e-22

Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication with N-terminal domain.


Pssm-ID: 460676  Cd Length: 135  Bit Score: 92.00  E-value: 3.54e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578817982  186 KTGSVVLTASTDLRGYVVGQALQLHADVENQSGKDTSPVVASLLQKVSYKAK----RWIHDVRTIAEVEGAGVKAWRRAQ 261
Cdd:pfam02752   1 WSGKVSYSVSLPKKGYVPGETIPVTIEIDNQSKKKIKKIKISLVQQLTYKAKtplgESKREERVVAKEKNPGVAPGSKDK 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 578817982  262 WHEQILVPaLPQSALP---GCSLIHIDYYLQVSLKAP----EATVTLPVFIGNI 308
Cdd:pfam02752  81 WEKELQLQ-IPTDLPPsstKCKIIKVEYKLKVTVDLSgsasELRLELPITIGTS 133
Arrestin_C smart01017
Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports ...
 186-308 1.41e-21

Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication with N-terminal domain. Arrestins comprise a family of closely-related proteins that includes beta-arrestin-1 and -2, which regulate the function of beta-adrenergic receptors by binding to their phosphorylated forms, impairing their capacity to activate G(S) proteins; Cone photoreceptors C-arrestin (arrestin-X). which could bind to phosphorylated red/green opsins; and Drosophila phosrestins I and II, which undergo light-induced phosphorylation, and probably play a role in photoreceptor transduction.


Pssm-ID: 214976 [Multi-domain]  Cd Length: 142  Bit Score: 90.48  E-value: 1.41e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578817982   186 KTGSVVLTASTDLRGYVVGQALQLHADVENQSGKDTSPVVASLLQKVSY-------------KAKRWIHDVRTIAEV-EG 251
Cdd:smart01017   1 WSGPLSLEVSLPKKGYVPGETIPVTIKITNLSKKTVKKIKVSLVQTVTYvssdgpvkrslaeKSKEKKADRKTLVKElDG 80

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 578817982   252 AGVKAWRRAQWHEQILVPALPQSaLPGCSLIHIDYYLQVSL----KAPEATVTLPVFIGNI 308
Cdd:smart01017  81 GPVLPGNKDKFEGQLKVPPLPPT-SRTCRLIKVEYKLKVKLrlsgKHSELRLELPITIGTV 140
Arrestin_N pfam00339
Arrestin (or S-antigen), N-terminal domain; Ig-like beta-sandwich fold. Scop reports ...
 82-146 6.98e-12

Arrestin (or S-antigen), N-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication with C-terminal domain.


Pssm-ID: 425619  Cd Length: 148  Bit Score: 63.08  E-value: 6.98e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 578817982   82 DKGSLPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRAAIHTP-RFSKdhKCSLVFYILSPLNLN 146
Cdd:pfam00339  85 GQNKLPAGTHTFPFSFTLPPNCPSSFEGKHGGIRYEVKVTLDRPwKFNK--SFRRVFTVIPKLDLN 148
Arrestin_C smart01017
Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports ...
 86-142 7.71e-04

Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication with N-terminal domain. Arrestins comprise a family of closely-related proteins that includes beta-arrestin-1 and -2, which regulate the function of beta-adrenergic receptors by binding to their phosphorylated forms, impairing their capacity to activate G(S) proteins; Cone photoreceptors C-arrestin (arrestin-X). which could bind to phosphorylated red/green opsins; and Drosophila phosrestins I and II, which undergo light-induced phosphorylation, and probably play a role in photoreceptor transduction.


Pssm-ID: 214976 [Multi-domain]  Cd Length: 142  Bit Score: 39.63  E-value: 7.71e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 578817982    86 LPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRAAIHTPRFSKDHKCSLVFYILSP 142
Cdd:smart01017  84 LPGNKDKFEGQLKVPPLPPTSRTCRLIKVEYKLKVKLRLSGKHSELRLELPITIGTV 140
 
Name Accession Description Interval E-value
Arrestin_C pfam02752
Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports ...
 186-308 3.54e-22

Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication with N-terminal domain.


Pssm-ID: 460676  Cd Length: 135  Bit Score: 92.00  E-value: 3.54e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578817982  186 KTGSVVLTASTDLRGYVVGQALQLHADVENQSGKDTSPVVASLLQKVSYKAK----RWIHDVRTIAEVEGAGVKAWRRAQ 261
Cdd:pfam02752   1 WSGKVSYSVSLPKKGYVPGETIPVTIEIDNQSKKKIKKIKISLVQQLTYKAKtplgESKREERVVAKEKNPGVAPGSKDK 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 578817982  262 WHEQILVPaLPQSALP---GCSLIHIDYYLQVSLKAP----EATVTLPVFIGNI 308
Cdd:pfam02752  81 WEKELQLQ-IPTDLPPsstKCKIIKVEYKLKVTVDLSgsasELRLELPITIGTS 133
Arrestin_C smart01017
Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports ...
 186-308 1.41e-21

Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication with N-terminal domain. Arrestins comprise a family of closely-related proteins that includes beta-arrestin-1 and -2, which regulate the function of beta-adrenergic receptors by binding to their phosphorylated forms, impairing their capacity to activate G(S) proteins; Cone photoreceptors C-arrestin (arrestin-X). which could bind to phosphorylated red/green opsins; and Drosophila phosrestins I and II, which undergo light-induced phosphorylation, and probably play a role in photoreceptor transduction.


Pssm-ID: 214976 [Multi-domain]  Cd Length: 142  Bit Score: 90.48  E-value: 1.41e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578817982   186 KTGSVVLTASTDLRGYVVGQALQLHADVENQSGKDTSPVVASLLQKVSY-------------KAKRWIHDVRTIAEV-EG 251
Cdd:smart01017   1 WSGPLSLEVSLPKKGYVPGETIPVTIKITNLSKKTVKKIKVSLVQTVTYvssdgpvkrslaeKSKEKKADRKTLVKElDG 80

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 578817982   252 AGVKAWRRAQWHEQILVPALPQSaLPGCSLIHIDYYLQVSL----KAPEATVTLPVFIGNI 308
Cdd:smart01017  81 GPVLPGNKDKFEGQLKVPPLPPT-SRTCRLIKVEYKLKVKLrlsgKHSELRLELPITIGTV 140
Arrestin_N pfam00339
Arrestin (or S-antigen), N-terminal domain; Ig-like beta-sandwich fold. Scop reports ...
 82-146 6.98e-12

Arrestin (or S-antigen), N-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication with C-terminal domain.


Pssm-ID: 425619  Cd Length: 148  Bit Score: 63.08  E-value: 6.98e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 578817982   82 DKGSLPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRAAIHTP-RFSKdhKCSLVFYILSPLNLN 146
Cdd:pfam00339  85 GQNKLPAGTHTFPFSFTLPPNCPSSFEGKHGGIRYEVKVTLDRPwKFNK--SFRRVFTVIPKLDLN 148
Arrestin_C smart01017
Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports ...
 86-142 7.71e-04

Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication with N-terminal domain. Arrestins comprise a family of closely-related proteins that includes beta-arrestin-1 and -2, which regulate the function of beta-adrenergic receptors by binding to their phosphorylated forms, impairing their capacity to activate G(S) proteins; Cone photoreceptors C-arrestin (arrestin-X). which could bind to phosphorylated red/green opsins; and Drosophila phosrestins I and II, which undergo light-induced phosphorylation, and probably play a role in photoreceptor transduction.


Pssm-ID: 214976 [Multi-domain]  Cd Length: 142  Bit Score: 39.63  E-value: 7.71e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 578817982    86 LPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRAAIHTPRFSKDHKCSLVFYILSP 142
Cdd:smart01017  84 LPGNKDKFEGQLKVPPLPPTSRTCRLIKVEYKLKVKLRLSGKHSELRLELPITIGTV 140
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH