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Conserved domains on  [gi|578821409|ref|XP_006718612|]
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pecanex-like protein 3 isoform X3 [Homo sapiens]

Protein Classification

oligosaccharide repeat unit polymerase; pecanex family protein( domain architecture ID 10523572)

oligosaccharide repeat unit polymerase may act to polymerize the oligosaccharide repeat units of surface polysaccharides, including O-antigen in Gram-negative bacteria and capsular polysaccharide in Gram-positive bacteria; pecanex family protein similar to Drosophila melanogaster protein pecanex that is involved in neurogenesis

Gene Ontology:  GO:0016020

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Pecanex_C pfam05041
Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein ...
 1577-1803 2.12e-138

Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein homologs. The pecanex protein is a maternal-effect neurogenic gene found in Drosophila.


:

Pssm-ID: 461533  Cd Length: 227  Bit Score: 429.82  E-value: 2.12e-138
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  1577 DQDWNSPLVTLCFGLCVLGRRALGTASHSMSASLEPFLYGLHALFKGDFRITSPRDEWVFADMDLLHRVVAPGVRMALKL 1656
Cdd:pfam05041    1 DSDSDSTLVTLCFALSLLGRRALGSASHSMSNSLESFLYGLHFLFKGDFRITSDKDEWVFMDLDLLRKVVAPAMRMALKL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  1657 HQDHFTSPDEYEEPAALYDAIAANEERLVISHEGDPAWRSAILSNTPSLLALRHVLDDASDEYKIIMLNRRHLSFRVIKV 1736
Cdd:pfam05041   81 HQDHFTDPDEYDENEVLYDAIHTYELVIVIEHESDPRWRVAVLSNNPSLLALRHVDDDGEDEYKIIMLNRRTLSFRVIKV 160

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 578821409  1737 NRECVRGLWAGQQQELVFLRNRNPERGSIQNAKQALRNMINSSCDQPLGYPIYVSPLTTSLAGSHPQ 1803
Cdd:pfam05041  161 NRECVRGLWAGQQQELIFLRNRNRERGSIQNAKQALRNIINSSCDQPIGYPIYVSPLTTSYSNTHLQ 227
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 194-629 8.35e-08

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 58.03  E-value: 8.35e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQR 273
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR 2685

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  274 RGA----GGYQPLDRRGSGEPTPQKAGSSDScfSGTDRETLSSFKSEKTNSTHLD----SPPGGPAPEGSDTDPPSEAeL 345
Cdd:PHA03247 2686 RAArptvGSLTSLADPPPPPPTPEPAPHALV--SATPLPPGPAAARQASPALPAApappAVPAGPATPGGPARPARPP-T 2762

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  346 PASPDAGVPSDDTlrsfdtvigAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPPGRAPRRPllegggffedEDTS 425
Cdd:PHA03247 2763 TAGPPAPAPPAAP---------AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALP----------PAAS 2823

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  426 EGSELSPASSlrSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHARVLS 505
Cdd:PHA03247 2824 PAGPLPPPTS--AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALP 2901

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  506 MDGAGgdvlRPPLAGCKAELEAQVGVEQAASEPVVLPAEAR-RGPAANQPGWRGELQEEGAVggaaeeTGRRDRSSSVRR 584
Cdd:PHA03247 2902 PDQPE----RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRpQPPLAPTTDPAGAGEPSGAV------PQPWLGALVPGR 2971

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 578821409  585 TQAIRRRhnaGSNPTPPASVMGSPPSSLQEAQRGRAASHSRALTL 629
Cdd:PHA03247 2972 VAVPRFR---VPQPAPSREAPASSTPPLTGHSLSRVSSWASSLAL 3013
 
Name Accession Description Interval E-value
Pecanex_C pfam05041
Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein ...
 1577-1803 2.12e-138

Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein homologs. The pecanex protein is a maternal-effect neurogenic gene found in Drosophila.


Pssm-ID: 461533  Cd Length: 227  Bit Score: 429.82  E-value: 2.12e-138
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  1577 DQDWNSPLVTLCFGLCVLGRRALGTASHSMSASLEPFLYGLHALFKGDFRITSPRDEWVFADMDLLHRVVAPGVRMALKL 1656
Cdd:pfam05041    1 DSDSDSTLVTLCFALSLLGRRALGSASHSMSNSLESFLYGLHFLFKGDFRITSDKDEWVFMDLDLLRKVVAPAMRMALKL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  1657 HQDHFTSPDEYEEPAALYDAIAANEERLVISHEGDPAWRSAILSNTPSLLALRHVLDDASDEYKIIMLNRRHLSFRVIKV 1736
Cdd:pfam05041   81 HQDHFTDPDEYDENEVLYDAIHTYELVIVIEHESDPRWRVAVLSNNPSLLALRHVDDDGEDEYKIIMLNRRTLSFRVIKV 160

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 578821409  1737 NRECVRGLWAGQQQELVFLRNRNPERGSIQNAKQALRNMINSSCDQPLGYPIYVSPLTTSLAGSHPQ 1803
Cdd:pfam05041  161 NRECVRGLWAGQQQELIFLRNRNRERGSIQNAKQALRNIINSSCDQPIGYPIYVSPLTTSYSNTHLQ 227
PHA03247 PHA03247
large tegument protein UL36; Provisional
 194-629 8.35e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 58.03  E-value: 8.35e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQR 273
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR 2685

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  274 RGA----GGYQPLDRRGSGEPTPQKAGSSDScfSGTDRETLSSFKSEKTNSTHLD----SPPGGPAPEGSDTDPPSEAeL 345
Cdd:PHA03247 2686 RAArptvGSLTSLADPPPPPPTPEPAPHALV--SATPLPPGPAAARQASPALPAApappAVPAGPATPGGPARPARPP-T 2762

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  346 PASPDAGVPSDDTlrsfdtvigAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPPGRAPRRPllegggffedEDTS 425
Cdd:PHA03247 2763 TAGPPAPAPPAAP---------AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALP----------PAAS 2823

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  426 EGSELSPASSlrSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHARVLS 505
Cdd:PHA03247 2824 PAGPLPPPTS--AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALP 2901

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  506 MDGAGgdvlRPPLAGCKAELEAQVGVEQAASEPVVLPAEAR-RGPAANQPGWRGELQEEGAVggaaeeTGRRDRSSSVRR 584
Cdd:PHA03247 2902 PDQPE----RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRpQPPLAPTTDPAGAGEPSGAV------PQPWLGALVPGR 2971

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 578821409  585 TQAIRRRhnaGSNPTPPASVMGSPPSSLQEAQRGRAASHSRALTL 629
Cdd:PHA03247 2972 VAVPRFR---VPQPAPSREAPASSTPPLTGHSLSRVSSWASSLAL 3013
 
Name Accession Description Interval E-value
Pecanex_C pfam05041
Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein ...
 1577-1803 2.12e-138

Pecanex protein (C-terminus); This family consists of C terminal region of the pecanex protein homologs. The pecanex protein is a maternal-effect neurogenic gene found in Drosophila.


Pssm-ID: 461533  Cd Length: 227  Bit Score: 429.82  E-value: 2.12e-138
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  1577 DQDWNSPLVTLCFGLCVLGRRALGTASHSMSASLEPFLYGLHALFKGDFRITSPRDEWVFADMDLLHRVVAPGVRMALKL 1656
Cdd:pfam05041    1 DSDSDSTLVTLCFALSLLGRRALGSASHSMSNSLESFLYGLHFLFKGDFRITSDKDEWVFMDLDLLRKVVAPAMRMALKL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  1657 HQDHFTSPDEYEEPAALYDAIAANEERLVISHEGDPAWRSAILSNTPSLLALRHVLDDASDEYKIIMLNRRHLSFRVIKV 1736
Cdd:pfam05041   81 HQDHFTDPDEYDENEVLYDAIHTYELVIVIEHESDPRWRVAVLSNNPSLLALRHVDDDGEDEYKIIMLNRRTLSFRVIKV 160

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 578821409  1737 NRECVRGLWAGQQQELVFLRNRNPERGSIQNAKQALRNMINSSCDQPLGYPIYVSPLTTSLAGSHPQ 1803
Cdd:pfam05041  161 NRECVRGLWAGQQQELIFLRNRNRERGSIQNAKQALRNIINSSCDQPIGYPIYVSPLTTSYSNTHLQ 227
PHA03247 PHA03247
large tegument protein UL36; Provisional
 194-629 8.35e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 58.03  E-value: 8.35e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQR 273
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR 2685

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  274 RGA----GGYQPLDRRGSGEPTPQKAGSSDScfSGTDRETLSSFKSEKTNSTHLD----SPPGGPAPEGSDTDPPSEAeL 345
Cdd:PHA03247 2686 RAArptvGSLTSLADPPPPPPTPEPAPHALV--SATPLPPGPAAARQASPALPAApappAVPAGPATPGGPARPARPP-T 2762

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  346 PASPDAGVPSDDTlrsfdtvigAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPPGRAPRRPllegggffedEDTS 425
Cdd:PHA03247 2763 TAGPPAPAPPAAP---------AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALP----------PAAS 2823

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  426 EGSELSPASSlrSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHARVLS 505
Cdd:PHA03247 2824 PAGPLPPPTS--AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALP 2901

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  506 MDGAGgdvlRPPLAGCKAELEAQVGVEQAASEPVVLPAEAR-RGPAANQPGWRGELQEEGAVggaaeeTGRRDRSSSVRR 584
Cdd:PHA03247 2902 PDQPE----RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRpQPPLAPTTDPAGAGEPSGAV------PQPWLGALVPGR 2971

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 578821409  585 TQAIRRRhnaGSNPTPPASVMGSPPSSLQEAQRGRAASHSRALTL 629
Cdd:PHA03247 2972 VAVPRFR---VPQPAPSREAPASSTPPLTGHSLSRVSSWASSLAL 3013
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 197-510 6.91e-06

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 51.33  E-value: 6.91e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  197 PQTPPGAVPDPSLAStDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQRRGA 276
Cdd:PHA03307  118 PPTPPPASPPPSPAP-DLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPS 196

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  277 GGYQPLDRRGSGEPTPQKAGSSDSCFSGtDRETLSSFKSEKTNSTHLDSPPGGPAPEGSDTDP-PSEAELPASPDAGVPS 355
Cdd:PHA03307  197 TPPAAASPRPPRRSSPISASASSPAPAP-GRSAADDAGASSSDSSSSESSGCGWGPENECPLPrPAPITLPTRIWEASGW 275

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  356 DDTLRSFDTVIGAGTPPGlaepllvvrpkdlallrPSKRQPPLRRHSPPGRAPRRPLLEGGGffedeDTSEGSELSPASS 435
Cdd:PHA03307  276 NGPSSRPGPASSSSSPRE-----------------RSPSPSPSSPGSGPAPSSPRASSSSSS-----SRESSSSSTSSSS 333

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 578821409  436 LRSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEG--TAVPPKRPygtqrTPSTASAKTHARVLSMDGAG 510
Cdd:PHA03307  334 ESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPssPAASAGRP-----TRRRARAAVAGRARRRDATG 405
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 197-502 3.61e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 49.01  E-value: 3.61e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  197 PQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKsfLTLTQPDRALVRTSSRREQRRGA 276
Cdd:PHA03307   72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASP--PPSPAPDLSEMLRPVGSPGPPPA 149

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  277 GGYQPLDRRGSGEPTPQKAGSSDSCFSGTDRETLSSfKSEKTNSTHLDSPPGGPAPEGSDTDPPSEAELPASPDAGVPSD 356
Cdd:PHA03307  150 ASPPAAGASPAAVASDAASSRQAALPLSSPEETARA-PSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSA 228

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  357 DTLRSFDTVIGAGTP-PGLAEPLLVVRPKDLALLRPSKRQPplRRHSPPGRAPRRPLLEGGGFFEDEDTSEGSELSPASS 435
Cdd:PHA03307  229 ADDAGASSSDSSSSEsSGCGWGPENECPLPRPAPITLPTRI--WEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSG 306

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 578821409  436 LRSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHAR 502
Cdd:PHA03307  307 PAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSR 373
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 197-438 7.63e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 48.24  E-value: 7.63e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  197 PQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSqelsksfltltqpdralvrtSSRREQRRGA 276
Cdd:PHA03307  189 PPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSD--------------------SSSSESSGCG 248

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  277 GGyqPLDRRGSGEPTPQKA-GSSDSCFSGTDRETLSSFKSEKTNSTHLDSPPGGPAPEGSDTDPPSEAELPASPDAGVPS 355
Cdd:PHA03307  249 WG--PENECPLPRPAPITLpTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSS 326

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  356 DDTLRSFDTVIGAGTPPG--LAEPLLVVRPKD-LALLRPSKRQPPLRRHSPPGRAPRRPLLEGGGFFEDED--TSEGSEL 430
Cdd:PHA03307  327 SSTSSSSESSRGAAVSPGpsPSRSPSPSRPPPpADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRarRRDATGR 406


                  ....*...
gi 578821409  431 SPASSLRS 438
Cdd:PHA03307  407 FPAGRPRP 414
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 286-626 1.37e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 47.09  E-value: 1.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  286 GSGEPTPQKAGSSDSCFSGTDRETLS---SFKSEKTNSTHLDSPPGGPAPEGSDTDPPSE-AELPASPDAGVPSDDTLRS 361
Cdd:PHA03307   74 GPGTEAPANESRSTPTWSLSTLAPASparEGSPTPPGPSSPDPPPPTPPPASPPPSPAPDlSEMLRPVGSPGPPPAASPP 153

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  362 FDTVIGAGTPPGLAEPLLVVRPkdLALLRPSKRQPPLRRHSPPGRAPRrPLLEGGGFFEDEDTSEGSELSPASSLRSQRR 441
Cdd:PHA03307  154 AAGASPAAVASDAASSRQAALP--LSSPEETARAPSSPPAEPPPSTPP-AAASPRPPRRSSPISASASSPAPAPGRSAAD 230

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  442 YSTDSSSSTSCYSP----ESSRGAAGGPRKRRAPHGAEEGTAVPPKRP---YGTQRTPSTASAKTHARVLSMDGAGGDVL 514
Cdd:PHA03307  231 DAGASSSDSSSSESsgcgWGPENECPLPRPAPITLPTRIWEASGWNGPssrPGPASSSSSPRERSPSPSPSSPGSGPAPS 310

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  515 RPPLAGckaeleaqvgvEQAASEPVVLPAEARRGPAANQPGWRGelqeegavGGAAEETGRRDRSSSVRRTQAIRRRHNA 594
Cdd:PHA03307  311 SPRASS-----------SSSSSRESSSSSTSSSSESSRGAAVSP--------GPSPSRSPSPSRPPPPADPSSPRKRPRP 371

                         330       340       350
                  ....*....|....*....|....*....|..
gi 578821409  595 GSNPTPPASVMGSPPSSLQEAQRGRAASHSRA 626
Cdd:PHA03307  372 SRAPSSPAASAGRPTRRRARAAVAGRARRRDA 403
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 288-632 2.79e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 46.32  E-value: 2.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  288 GEPTPQKAGSSDSCFSGTDRETLSSFKSEKTNSTHLDSPPGGPAPEGSDTDPPSEAELPASPDAGVPSD----------D 357
Cdd:PHA03307   65 FEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDlsemlrpvgsP 144

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  358 TLRSFDTVIGAGTPPGlAEPLLVVRPKDLALL----RPSKRQPPLRRHSPPGRAPrRPLLEGGGFFEDEDTSEGSELSPA 433
Cdd:PHA03307  145 GPPPAASPPAAGASPA-AVASDAASSRQAALPlsspEETARAPSSPPAEPPPSTP-PAAASPRPPRRSSPISASASSPAP 222

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  434 SSLRSQRRYSTDSSSSTSCYSP----ESSRGAAGGPRKRRAPHGAEEGTAVPPKRP---YGTQRTPSTASAKTHARVLSM 506
Cdd:PHA03307  223 APGRSAADDAGASSSDSSSSESsgcgWGPENECPLPRPAPITLPTRIWEASGWNGPssrPGPASSSSSPRERSPSPSPSS 302

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  507 DGAGGDVLRPPLAGckaeleaqvgvEQAASEPVVLPAEARRGPAANQPgwrgelqeegAVGGAAEEtgrrdrsssvrrtq 586
Cdd:PHA03307  303 PGSGPAPSSPRASS-----------SSSSSRESSSSSTSSSSESSRGA----------AVSPGPSP-------------- 347

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 578821409  587 airrrHNAGSNPTPPASvmgSPPSSLQEAQRGRAASHSRALTLPSA 632
Cdd:PHA03307  348 -----SRSPSPSRPPPP---ADPSSPRKRPRPSRAPSSPAASAGRP 385
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 194-608 3.20e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 45.93  E-value: 3.20e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRT--SSRRE 271
Cdd:PHA03307   17 GGEFFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTwsLSTLA 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  272 QRRGAGGYQPLDRRGSGEPTPQKAGSSDSCFSGTDRETLSSFKSEKTnsthLDSPPGGPAPEGSDTDPPSEAELPASPDA 351
Cdd:PHA03307   97 PASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGS----PGPPPAASPPAAGASPAAVASDAASSRQA 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  352 GVPSDDTLRSFDTVIGAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPP--GRAPRRPLLEGGGFFEDEDTSEGSE 429
Cdd:PHA03307  173 ALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGrsAADDAGASSSDSSSSESSGCGWGPE 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  430 ------LSPASSLRSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQ-RTPSTASAKTHAR 502
Cdd:PHA03307  253 necplpRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSsSSRESSSSSTSSS 332

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  503 VLSMDGAGGDVLRPPlagckaeleAQVGVEQAASEPVVLPAEARRGPAANQPGW------RGELQEEG-AVGGAA---EE 572
Cdd:PHA03307  333 SESSRGAAVSPGPSP---------SRSPSPSRPPPPADPSSPRKRPRPSRAPSSpaasagRPTRRRARaAVAGRArrrDA 403

                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 578821409  573 TGRRDRSSSVRRTQAIRRRHNAGSNPTPPASVMGSP 608
Cdd:PHA03307  404 TGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSGEP 439
PHA03247 PHA03247
large tegument protein UL36; Provisional
 200-646 5.53e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.31  E-value: 5.53e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  200 PPGAvPDPSLASTDSSEPSP-LAGDGAPWSGSSMADTPMspLLKGSLSQELSKSFLTltqpdralvrtssrREQRRGAGG 278
Cdd:PHA03247 2417 PPGP-PDVRFVGSEEIEELPfVSPGGDVLAGLAADGDPF--FARTILGAPFSLSLLL--------------GELFPGAPV 2479

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  279 YQ-PLDRRGSGEPTPqkagSSDSCFSGTDRETLSSFKSEKTNSTHLDSPPGGPAP-----------------EGSDTDPP 340
Cdd:PHA03247 2480 YRrPAEARFPFAAGA----APDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHprmltwirgleelasddAGDPPPPL 2555

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  341 SEAELPASPDAGVP-SDDTLRSFDTVIGA-----GTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSP----PGRAPRR 410
Cdd:PHA03247 2556 PPAAPPAAPDRSVPpPRPAPRPSEPAVTSrarrpDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPdpppPSPSPAA 2635

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  411 PLLEGGGFFEDEDTSEGSELSPASSLRSQRRYSTDSSSSTSCYSPESSRgaaggPRKRRAPHGAEEGTAVPPKRPYGTQR 490
Cdd:PHA03247 2636 NEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPR-----RRAARPTVGSLTSLADPPPPPPTPEP 2710

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578821409  491 TPSTASAKTHArVLSMDGAGGDVLRPPLAGckaeleaqvgVEQAASEPVVLPAEARRGPAANQPGwrgelqeegavggaa 570
Cdd:PHA03247 2711 APHALVSATPL-PPGPAAARQASPALPAAP----------APPAVPAGPATPGGPARPARPPTTA--------------- 2764

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 578821409  571 eetgrrdrsssvrrtqairrrhnAGSNPTPPASVMGSPPSSLQEAQRGRAASHSRALTLPSALHFASSLLLTRAGA 646
Cdd:PHA03247 2765 -----------------------GPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAA 2817
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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