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Conserved domains on  [gi|578837738|ref|XP_006724494|]
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serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X20 [Homo sapiens]

Protein Classification

SAPS family protein( domain architecture ID 10517350)

SAPS (SIT4-associating proteins) family protein

Gene Ontology:  GO:0019888|GO:0043666
PubMed:  8649382

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 128-532 4.23e-160

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


:

Pssm-ID: 398279  Cd Length: 383  Bit Score: 475.19  E-value: 4.23e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  128 IGNLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPaGLRQDVLHWLNEEKVIQRLVELIHPSQDEDR 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  208 QSNASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESQDCVEQLLKNMFDGdRTESCLVSGTQVLLTLLETRRVGTEGLV 287
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVSEESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPVQ 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  288 DSFSQGLERSYAVSSSV-----LHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSIN 362
Cdd:pfam04499 159 LLYTTLEEHPPSDRDPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSLL 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  363 QE---------LCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILshaareerteasgsesrvepphengNRSLETPQp 433
Cdd:pfam04499 239 NEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQIL-------------------------NGPMDFSY- 292

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  434 aaslpDNTMVTHLFQKCCLVQRILEAWEANDHTQAAGGMRRGNMGHLTRIANAVVQNLERGPVQTHISEVIRGLpadCRG 513
Cdd:pfam04499 293 -----NSFLVVDLFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---ENE 364

                         410
                  ....*....|....*....
gi 578837738  514 RWESFVEETLTETNRRNTV 532
Cdd:pfam04499 365 EWEEYVEETLEETRERYNV 383
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 701-962 1.23e-06

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.02  E-value: 1.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  701 APPVEGDSEAGAMWTAVFDEPANSTPTAPGVV---RDVGSSVWAAGTSAPEEkgwakftdfqpfccsesGPRCSSPVDTE 777
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVsrpRRARRLGRAAQASSPPQ-----------------RPRRRAARPTV 2692

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  778 CSHAEGSRSQGPEKASQASYFAVSPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPP 855
Cdd:PHA03247 2693 GSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAspALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPP 2772

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  856 LPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEAtvAITTALSKAGPaIPTPAVSSALAVAVPLGPIMAV 935
Cdd:PHA03247 2773 AAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA--ALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPS 2849

                         250       260
                  ....*....|....*....|....*..
gi 578837738  936 TAAPAMVATLGTVTKDGKTDAPPEGAA 962
Cdd:PHA03247 2850 LPLGGSVAPGGDVRRRPPSRSPAAKPA 2876
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 128-532 4.23e-160

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 475.19  E-value: 4.23e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  128 IGNLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPaGLRQDVLHWLNEEKVIQRLVELIHPSQDEDR 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  208 QSNASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESQDCVEQLLKNMFDGdRTESCLVSGTQVLLTLLETRRVGTEGLV 287
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVSEESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPVQ 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  288 DSFSQGLERSYAVSSSV-----LHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSIN 362
Cdd:pfam04499 159 LLYTTLEEHPPSDRDPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSLL 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  363 QE---------LCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILshaareerteasgsesrvepphengNRSLETPQp 433
Cdd:pfam04499 239 NEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQIL-------------------------NGPMDFSY- 292

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  434 aaslpDNTMVTHLFQKCCLVQRILEAWEANDHTQAAGGMRRGNMGHLTRIANAVVQNLERGPVQTHISEVIRGLpadCRG 513
Cdd:pfam04499 293 -----NSFLVVDLFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---ENE 364

                         410
                  ....*....|....*....
gi 578837738  514 RWESFVEETLTETNRRNTV 532
Cdd:pfam04499 365 EWEEYVEETLEETRERYNV 383
PHA03247 PHA03247
large tegument protein UL36; Provisional
 701-962 1.23e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.02  E-value: 1.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  701 APPVEGDSEAGAMWTAVFDEPANSTPTAPGVV---RDVGSSVWAAGTSAPEEkgwakftdfqpfccsesGPRCSSPVDTE 777
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVsrpRRARRLGRAAQASSPPQ-----------------RPRRRAARPTV 2692

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  778 CSHAEGSRSQGPEKASQASYFAVSPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPP 855
Cdd:PHA03247 2693 GSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAspALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPP 2772

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  856 LPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEAtvAITTALSKAGPaIPTPAVSSALAVAVPLGPIMAV 935
Cdd:PHA03247 2773 AAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA--ALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPS 2849

                         250       260
                  ....*....|....*....|....*..
gi 578837738  936 TAAPAMVATLGTVTKDGKTDAPPEGAA 962
Cdd:PHA03247 2850 LPLGGSVAPGGDVRRRPPSRSPAAKPA 2876
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 722-967 2.03e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 41.87  E-value: 2.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  722 ANSTPTAPgVVRDVGSsvWAAGTSAPEekgwakftdfqpfCCSESGPRC---SSPVDTECShAEGSRSQGPEKASQASYF 798
Cdd:pfam17823  62 AATAAPAP-VTLTKGT--SAAHLNSTE-------------VTAEHTPHGtdlSEPATREGA-ADGAASRALAAAASSSPS 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  799 AVSPASPCAWNVCVTRKAPLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADSRLLS 878
Cdd:pfam17823 125 SAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPA 204

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  879 PACPAPKEVTAAPAVAVPpeatvAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDG------ 952
Cdd:pfam17823 205 TLTPARGISTAATATGHP-----AAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGdpharr 279

                         250       260
                  ....*....|....*....|....*...
gi 578837738  953 -------------KTDAPPEGAALNGPV 967
Cdd:pfam17823 280 lspakhmpsdtmaRNPAAPMGAQAQGPI 307
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 128-532 4.23e-160

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 475.19  E-value: 4.23e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  128 IGNLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPaGLRQDVLHWLNEEKVIQRLVELIHPSQDEDR 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  208 QSNASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESQDCVEQLLKNMFDGdRTESCLVSGTQVLLTLLETRRVGTEGLV 287
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVSEESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPVQ 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  288 DSFSQGLERSYAVSSSV-----LHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSIN 362
Cdd:pfam04499 159 LLYTTLEEHPPSDRDPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSLL 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  363 QE---------LCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILshaareerteasgsesrvepphengNRSLETPQp 433
Cdd:pfam04499 239 NEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQIL-------------------------NGPMDFSY- 292

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  434 aaslpDNTMVTHLFQKCCLVQRILEAWEANDHTQAAGGMRRGNMGHLTRIANAVVQNLERGPVQTHISEVIRGLpadCRG 513
Cdd:pfam04499 293 -----NSFLVVDLFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---ENE 364

                         410
                  ....*....|....*....
gi 578837738  514 RWESFVEETLTETNRRNTV 532
Cdd:pfam04499 365 EWEEYVEETLEETRERYNV 383
PHA03247 PHA03247
large tegument protein UL36; Provisional
 701-962 1.23e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.02  E-value: 1.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  701 APPVEGDSEAGAMWTAVFDEPANSTPTAPGVV---RDVGSSVWAAGTSAPEEkgwakftdfqpfccsesGPRCSSPVDTE 777
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVsrpRRARRLGRAAQASSPPQ-----------------RPRRRAARPTV 2692

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  778 CSHAEGSRSQGPEKASQASYFAVSPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPP 855
Cdd:PHA03247 2693 GSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAspALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPP 2772

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  856 LPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEAtvAITTALSKAGPaIPTPAVSSALAVAVPLGPIMAV 935
Cdd:PHA03247 2773 AAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA--ALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPS 2849

                         250       260
                  ....*....|....*....|....*..
gi 578837738  936 TAAPAMVATLGTVTKDGKTDAPPEGAA 962
Cdd:PHA03247 2850 LPLGGSVAPGGDVRRRPPSRSPAAKPA 2876
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
801-963 1.65e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 48.72  E-value: 1.65e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738 801 SPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADSRLLS 878
Cdd:PRK12323 373 GPATAAAAPVAQPAPAaaAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738 879 PACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSA-----LAVAVPLGPIMAVTAAPAMVATLGTvTKDGK 953
Cdd:PRK12323 453 APAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPppweeLPPEFASPAPAQPDAAPAGWVAESI-PDPAT 531

                        170
                 ....*....|
gi 578837738 954 TDAPPEGAAL 963
Cdd:PRK12323 532 ADPDDAFETL 541
PHA02682 PHA02682
ORF080 virion core protein; Provisional
 836-940 1.05e-04

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 45.24  E-value: 1.05e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738 836 QKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCAdsrllsPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIP 915
Cdd:PHA02682  63 QSRLKANSACMQRPSGQSPLAPSPACAAPAPACPACA------PAAPAPAVTCPAPAPACPPATAPTCPPPAVCPAPARP 136

                         90       100
                 ....*....|....*....|....*
gi 578837738 916 TPAVSSALAVAVPLGPIMAVTAAPA 940
Cdd:PHA02682 137 APACPPSTRQCPPAPPLPTPKPAPA 161
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
844-944 9.51e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 43.30  E-value: 9.51e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738 844 AVSRGPGREAPPLPTVARTEEAVGRVgcADSRLLSPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSAL 923
Cdd:PRK07003 361 AVTGGGAPGGGVPARVAGAVPAPGAR--AAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                         90       100
                 ....*....|....*....|.
gi 578837738 924 AVAVPLGPIMAVTAAPAMVAT 944
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASA 459
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
838-962 1.77e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.14  E-value: 1.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738 838 AASAMDAVSRGPGREAPPlptVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTP 917
Cdd:PRK07003 409 ALAPKAAAAAAATRAEAP---PAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAP 485

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 578837738 918 AvSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDGKTDAPPEGAA 962
Cdd:PRK07003 486 P-DAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPA 529
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 878-967 1.96e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 42.10  E-value: 1.96e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738 878 SPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDGKTDAP 957
Cdd:PRK14950 370 KPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKYTPPAP 449

                         90
                 ....*....|..
gi 578837738 958 P--EGAALNGPV 967
Cdd:PRK14950 450 PkeEEKALIADG 461
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 722-967 2.03e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 41.87  E-value: 2.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  722 ANSTPTAPgVVRDVGSsvWAAGTSAPEekgwakftdfqpfCCSESGPRC---SSPVDTECShAEGSRSQGPEKASQASYF 798
Cdd:pfam17823  62 AATAAPAP-VTLTKGT--SAAHLNSTE-------------VTAEHTPHGtdlSEPATREGA-ADGAASRALAAAASSSPS 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  799 AVSPASPCAWNVCVTRKAPLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADSRLLS 878
Cdd:pfam17823 125 SAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPA 204

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  879 PACPAPKEVTAAPAVAVPpeatvAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDG------ 952
Cdd:pfam17823 205 TLTPARGISTAATATGHP-----AAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGdpharr 279

                         250       260
                  ....*....|....*....|....*...
gi 578837738  953 -------------KTDAPPEGAALNGPV 967
Cdd:pfam17823 280 lspakhmpsdtmaRNPAAPMGAQAQGPI 307
PHA03247 PHA03247
large tegument protein UL36; Provisional
 721-966 2.14e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.23  E-value: 2.14e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  721 PANSTPTAPGVVRDvGSSVWAAGTSAPEEKGWAKFTDFQP----FCCSESGPRCSSPVDTECSHAEGSRSQGPEKASQAS 796
Cdd:PHA03247 2593 PQSARPRAPVDDRG-DPRGPAPPSPLPPDTHAPDPPPPSPspaaNEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG 2671

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  797 YFAVSPASPCAWnvcvTRKA--PLLASdssssggshsedgdqkAASAMDAVSRGPGREAPPLPTVARTEEAVGRvgcADS 874
Cdd:PHA03247 2672 RAAQASSPPQRP----RRRAarPTVGS----------------LTSLADPPPPPPTPEPAPHALVSATPLPPGP---AAA 2728

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738  875 RLLSPACPApkevtaAPAVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDGKT 954
Cdd:PHA03247 2729 RQASPALPA------APAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPW 2802

                         250
                  ....*....|..
gi 578837738  955 DAPPEGAALNGP 966
Cdd:PHA03247 2803 DPADPPAAVLAP 2814
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
848-967 9.78e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 39.86  E-value: 9.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578837738 848 GPGREAPPLPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAV 927
Cdd:PRK12323 367 QSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGG 446

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 578837738 928 PLGPIMAVTAAPAMVATLGTVTKDGKTDAPPEGAALNGPV 967
Cdd:PRK12323 447 APAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPA 486
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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